prot_S-dermatodea_contig10059.44.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10059.44.1
Unique Nameprot_S-dermatodea_contig10059.44.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length109
Homology
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BLAST of mRNA_S-dermatodea_contig10059.44.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 7.270e-15
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:    1 MGGHRSSIRRVHATMLLFNYRRNHRMAGLYRGLDENLLGFYSQHNIEDLHMVTQGWFST-PLYAG 64
            MG + +S    H TMLL NYRRNHRMAGL+RG+D +LLG+YS   +ED+  +T+GW+   PLY G
Sbjct:  585 MGSYHASALMAHFTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDEPLYPG 649
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10059.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0J2_ECTSI7.270e-1555.383'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10059contigS-dermatodea_contig10059:1806..2310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10059.44.1mRNA_S-dermatodea_contig10059.44.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10059 1780..2352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10059.44.1 ID=prot_S-dermatodea_contig10059.44.1|Name=mRNA_S-dermatodea_contig10059.44.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=109bp
MGGHRSSIRRVHATMLLFNYRRNHRMAGLYRGLDENLLGFYSQHNIEDLH
MVTQGWFSTPLYAGWESTSNFRDTLERTGLVTEEDPKLESSSLVCNEGDG
VAQAGQDK*
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