mRNA_S-dermatodea_contig9997.17913.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9997.17913.1
Unique NamemRNA_S-dermatodea_contig9997.17913.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: D7FT75_ECTSI (Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT75_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.450e-64
Identity = 288/349 (82.52%), Postives = 299/349 (85.67%), Query Frame = 1
Query:    1 LALCNLSSGEHKARIVAEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTKSAVMHEEGLLPLLALVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKTNANIGFGATVLQNSADTKARRAQKQTQEHMEQSLRGG 1047
            LALCNLSSGEHKAR                                     GKP N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+STK+AVMHE+GL PLL LVNS+DGDCVRTAVY LGSLCE+D VKARL+ELGAVVNVVGQAS GDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVK+LPKGK  ANIGFGATVLQ++ D+KARRAQKQTQEH+EQSLR G
Sbjct: 3433 LALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKTAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHLEQSLRAG 3781          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: T0SIR8_SAPDV (Vacuolar protein 8 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIR8_SAPDV)

HSP 1 Score: 111 bits (278), Expect = 3.900e-23
Identity = 227/350 (64.86%), Postives = 266/350 (76.00%), Query Frame = 1
Query:    1 LALCNLSSGEHKARIVAEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTKSAVMHEEGLLPLLALVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKTNANIGFGATVLQNSADTK---ARRAQKQTQEHMEQSLR 1041
            LA+CNL+SG  K  IV  GAVRPL  L RFPD EI        AGLALGDHG   NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    ++ D +CVR A+Y +GS+ E   V  +L+ELGA+ ++V Q+   D+E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L+++M+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RARSTDEELQYKA++++G LA+NA K++PKG+ ++N G GA   + +A T+   AR+A++ T E++E+ +R
Sbjct: 3353 LAICNLASGPDKVAIVEAGAVRPLLHLVRFPDHEIXXXXXXXXAGLALGDHGH--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASDMECVRIALYCVGSIAEHIDVLTKLLELGALAHIVHQSRQPDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALRPLIAIMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARSTDEELQYKASMSLGQLAANATKVMPKGR-HSNDGVGAGASRMAATTEQLQARKARETTTEYIEKKIR 3699          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A485LIX7_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIX7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.060e-20
Identity = 104/231 (45.02%), Postives = 136/231 (58.87%), Query Frame = 1
Query:  352 SEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGK-TNANIGFGATVLQNSADT-KARRAQKQTQEHMEQSL 1038
            S D +C+R A+Y LGSL E   V  +L+ELGA+ N+V Q  L D+EV+                                    XXX                         X    L+SMM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR+ RARSTDEELQYKA++++G LASNA K++PKGK TN  +G GA+ +  + +  +AR+A++QTQ+++E+ +
Sbjct: 3471 STDLECIRIAIYCLGSLGENMDVLLKLIELGALANLVHQCRLPDLEVRRSCGYFFALVVEHHEFHDDFVSEGGMTTVISLASIEXXXCQEYATFGLAHLASNRDYQVKLVEHXALRPLISMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLTNDAVGGGASRMAAATENLQARKAREQTQDYLEKKI 3701          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A2R5GK93_9STRA (Vacuolar protein 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK93_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.070e-20
Identity = 144/195 (73.85%), Postives = 157/195 (80.51%), Query Frame = 1
Query:  343 LVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPK 927
            + NS D  CVRTA+Y +G  CET+ VKAR++E G +V V+ QA+ GD+EVK                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LV+MM+ +AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRL RARSTDEELQYKAALTVGHLASNAVK LPK
Sbjct: 3531 VANSRDLMCVRTALYCIGCCCETEEVKARIMEQGGLVTVLSQAANGDMEVKRNCGYVLALLAESMVYHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPLVAMMSTQAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLARARSTDEELQYKAALTVGHLASNAVKFLPK 3725          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A7S2A1K7_9STRA (Vacuolar protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1K7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.510e-20
Identity = 138/248 (55.65%), Postives = 167/248 (67.34%), Query Frame = 1
Query:  298 KSAVMHEEGLLPLLALVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKT-NANIGFGATVLQNSADTKARRAQKQTQEHMEQSL 1038
            K  V  E G   +L+L++S D +CV + +Y+LGSL E D ++  LVE+G++  +V +  LG IE+K   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMA  AE +H                            LRLGR+R TDEE+QYKAALTVGHLA+NAV  LPK +  +  +GF A   +  +  K  +A +  +E +  SL
Sbjct:   19 KMRVFRETGSKSILSLISSNDEECVHSGIYMLGSLAENDEIRGTLVEIGSIKWLVDKFKLGPIEIKRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMATNAESKHYAGMALLKLADNFENHITIAEEGGIQALLRLGRSRVTDEEVQYKAALTVGHLATNAVNQLPKQQVIDKGVGFAAGSWKKRSGVKKMQATEIAREFVNNSL 266          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A482RX95_9ARCH (Vacuolar protein 8 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX95_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 9.220e-19
Identity = 180/313 (57.51%), Postives = 211/313 (67.41%), Query Frame = 1
Query:    1 LALCNLSSGEHKARIVAEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTKSAVMHEEGLLPLLALVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKTN 939
            L LCNL + + K  ++ +G +RPL FL  FPD EIQRYA+LA+AG+ALG          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +        D +  AVY LGS+CE + VK R V+   +  VV   S GD+E+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     LV+M++ +AEP+H                            LRLGR R+TD++LQYKAALT+G LA+NAVK+LP  +++
Sbjct: 1525 LTLCNLCASQMKGLLLEQGVLRPLIFLMHFPDPEIQRYASLALAGVALGTKSVSKVQIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILQREHLGRDLLHAAVYCLGSICEHEDVKMRFVDSHGIQLVVRHLSTGDMEMKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVRPLVTMLSSDAEPKHYAGLALLKLADNFENHLRIAEEGGIQALLRLGRTRTTDDQLQYKAALTLGQLATNAVKLLPNAQSS 1837          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A6A4ZFQ5_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZFQ5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.930e-18
Identity = 145/232 (62.50%), Postives = 179/232 (77.16%), Query Frame = 1
Query:  349 NSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGK-TNANIGFGATVLQNSAD-TKARRAQKQTQEHMEQSL 1038
            +S D +C+R A+Y +GSL E   V  +L+ELGA+ N+V Q  L D+EV+                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ RARSTDEELQYKA++++G LASNA K++PKGK +N ++G  A+ +  + +  +AR+A++QTQE++E+ +
Sbjct:  188 SSADLECIRIAIYCIGSLAENMDVLVKLIELGALANIVHQCRLPDLEVRRNCGYFFALVVEHHEFHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLSNDSVGGSASRMAAATEHLQARKAREQTQEYLEKKI 419          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A7S2XVB4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVB4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.230e-17
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 1
Query:  826 LRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKTNAN-----IGFGATVLQNSADTKARRAQKQTQEHMEQSL 1038
            LRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGK   +     +GFG +V+Q+ A   +++ + QT++ +++SL
Sbjct:   36 LRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKGKGSGLSEEVGFGISVMQSRAQEASKKGRDQTKDFIKRSL 111          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: A0A397F5W8_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F5W8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.370e-17
Identity = 145/232 (62.50%), Postives = 179/232 (77.16%), Query Frame = 1
Query:  349 NSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGK-TNANIGFGATVLQNSAD-TKARRAQKQTQEHMEQSL 1038
            +S D +C+R A+Y +GSL E   V  +L+ELGA+ N+V Q  L D+EV+                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ RARSTDEELQYKA++++G LASNA K++PKGK +N ++G  A+ +  + +  +AR+A++QTQE++E+ +
Sbjct: 2179 SSADLECIRIAIYCIGSLAENMDVLVKLIELGALANIVHQCRLPDLEVRRNCGYFFALVVEHHEFHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLSNDSVGGSASRMAAATEHLQARKAREQTQEYLEKKI 2410          
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Match: W4GV31_9STRA (Vacuolar protein 8 n=15 Tax=Aphanomyces TaxID=100860 RepID=W4GV31_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.570e-17
Identity = 143/232 (61.64%), Postives = 177/232 (76.29%), Query Frame = 1
Query:  349 NSEDGDCVRTAVYVLGSLCETDSVKARLVELGAVVNVVGQASLGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGK-TNANIGFGATVLQNSAD-TKARRAQKQTQEHMEQSL 1038
            +S D +C+R A+Y +GSL E   V  +L+ELGA+ N+V Q  L D+EV+                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ RARSTDEELQYKA++++G LASNA K++PKGK +N ++G  A+ +  + +  +AR+A++QTQE++E+ +
Sbjct: 3470 SSADLECIRIAIYCIGSLAENLDVLIKLIELGALANIVHQCRLPDLEVRRNCGYFFALVVEHHEFHDDFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLSNDSVGGSASRMAAATEHLQARKAREQTQEYLEKKI 3701          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9997.17913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT75_ECTSI1.450e-6482.52Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 R... [more]
T0SIR8_SAPDV3.900e-2364.86Vacuolar protein 8 n=1 Tax=Saprolegnia diclina (st... [more]
A0A485LIX7_9STRA5.060e-2045.02Vacuolar protein 8 n=1 Tax=Aphanomyces stellatus T... [more]
A0A2R5GK93_9STRA5.070e-2073.85Vacuolar protein 8 n=1 Tax=Hondaea fermentalgiana ... [more]
A0A7S2A1K7_9STRA5.510e-2055.65Vacuolar protein 8 n=1 Tax=Ditylum brightwellii Ta... [more]
A0A482RX95_9ARCH9.220e-1957.51Vacuolar protein 8 (Fragment) n=1 Tax=archaeon Tax... [more]
A0A6A4ZFQ5_9STRA4.930e-1862.50Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A7S2XVB4_9STRA1.230e-1760.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A397F5W8_9STRA1.370e-1762.50Vacuolar protein 8 (Fragment) n=1 Tax=Aphanomyces ... [more]
W4GV31_9STRA2.570e-1761.64Vacuolar protein 8 n=15 Tax=Aphanomyces TaxID=1008... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9997contigS-dermatodea_contig9997:6475..7849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score234.6
Seed ortholog evalue7.2e-59
Seed eggNOG ortholog2880.D7FT75
KEGG koko:K08332
EggNOG free text desc.nucleus-vacuole junction assembly
EggNOG OGsKOG0167@1,KOG0167@2759,KOG4224@1,KOG4224@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size1050
Cds size1050
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925442.6257443-CDS-S-dermatodea_contig9997:6474..71431622925442.6257443-CDS-S-dermatodea_contig9997:6474..7143Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9997 6475..7143 +
1694079936.7960553-CDS-S-dermatodea_contig9997:6474..71431694079936.7960553-CDS-S-dermatodea_contig9997:6474..7143Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9997 6475..7143 +
1622925442.6367986-CDS-S-dermatodea_contig9997:7468..78491622925442.6367986-CDS-S-dermatodea_contig9997:7468..7849Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9997 7469..7849 +
1694079936.8098156-CDS-S-dermatodea_contig9997:7468..78491694079936.8098156-CDS-S-dermatodea_contig9997:7468..7849Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9997 7469..7849 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9997.17913.1prot_S-dermatodea_contig9997.17913.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9997 6475..7849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9997.17913.1

>prot_S-dermatodea_contig9997.17913.1 ID=prot_S-dermatodea_contig9997.17913.1|Name=mRNA_S-dermatodea_contig9997.17913.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=350bp
LALCNLSSGEHKARIVAEGAVRPLTFLARFPDLEIQRYAALAIAGLALGD
HGKPSNKLRITEEGALKPLVDLVRFPEVEVQRCACLAVNAIALGTHASTK
SAVMHEEGLLPLLALVNSEDGDCVRTAVYVLGSLCETDSVKARLVELGAV
VNVVGQASLGDIEVKRAAGYFLALLSETREFHDDLAREGGLQAVVALANL
EDVECQEYAAFSLAHLSSNHEYQVTLVELGALRPLVSMMAVEAEPRHYAG
LALLKLADNFENHIRIAEEGGIQALLRLGRARSTDEELQYKAALTVGHLA
SNAVKMLPKGKTNANIGFGATVLQNSADTKARRAQKQTQEHMEQSLRGG*
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mRNA from alignment at S-dermatodea_contig9997:6475..7849+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9997.17913.1 ID=mRNA_S-dermatodea_contig9997.17913.1|Name=mRNA_S-dermatodea_contig9997.17913.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1375bp|location=Sequence derived from alignment at S-dermatodea_contig9997:6475..7849+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCGCCCTCTGCAACCTGTCTTCGGGGGAGCACAAGGCACGGATTGTGGC TGAGGGTGCCGTGCGCCCGCTCACGTTCCTCGCCCGGTTCCCTGACCTCG AAATACAGCGATATGCGGCACTCGCGATCGCTGGCCTAGCCCTTGGAGAC CATGGGAAGCCGTCAAACAAGCTCCGGATAACGGAAGAGGGGGCGCTGAA ACCCTTGGTTGACCTTGTCCGCTTCCCAGAAGTTGAGGTGCAGAGGTGCG CGTGCCTCGCTGTAAACGCCATCGCGCTCGGTACGCACGCTTCCACCAAG TCGGCGGTAATGCACGAAGAAGGGCTCCTACCGCTACTCGCGCTTGTAAA TTCCGAAGATGGCGACTGTGTGCGAACGGCAGTGTACGTTTTGGGCTCCC TCTGCGAGACCGATTCGGTGAAAGCGCGGCTCGTCGAGCTCGGGGCTGTC GTAAACGTCGTCGGCCAGGCCAGTCTCGGCGACATCGAGGTGAAGCGCGC CGCTGGTTACTTCCTTGCCCTCCTGAGTGAGACGCGGGAGTTTCACGACG ACCTGGCCCGAGAGGGGGGGCTGCAGGCGGTTGTGGCCCTGGCGAACCTC GAGGATGTAGAATGCCAAGAGTACGCCGCATTTTCATTGGCGCACCTGTC CAGCAACCACGAGTACCAGGTGAGCTTACTAGCAAGAATTCAAATGCTTG CTACGGTTTCACGCCTTCATTGAAACCGTGCTTCGAGCCAGAGATGCGAA TTGTCGATACGCAACTCTCGTGGGGAGGTAATTTCAGCACGTGAAACGCG TAGCAAATTCATCACTGTTAGGCTGATGATGCTTGACCAACGGGTTATAC AGATATAGATATGTTATGTTTGCACCGTCACGCGTTTCGCCGGCGATACC CTTCTAGACTACCACCCGGTGCCTTCCGTCCATGTGCCAAGCGGCGATCT TATCACCCCCACTCTTAAATACACTCACCCGGTTCCGCTCAAAGGTTACG CTCGTCGAGCTGGGTGCCCTCCGACCCTTGGTCAGCATGATGGCGGTCGA GGCCGAGCCCCGCCATTACGCCGGACTTGCCCTCCTAAAGCTCGCCGACA ACTTCGAGAACCACATCCGCATCGCCGAAGAGGGCGGTATCCAGGCTCTC TTACGGCTTGGTCGCGCGCGTTCCACAGACGAAGAGCTACAGTACAAGGC CGCCCTCACCGTGGGTCATCTTGCATCTAACGCGGTCAAGATGCTGCCGA AAGGGAAGACCAACGCAAACATAGGGTTTGGGGCAACGGTGCTGCAAAAT AGCGCAGATACTAAGGCTCGGCGAGCGCAGAAGCAGACTCAGGAGCATAT GGAGCAATCCTTACGAGGGGGGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig9997:6475..7849+

>mRNA_S-dermatodea_contig9997.17913.1 ID=mRNA_S-dermatodea_contig9997.17913.1|Name=mRNA_S-dermatodea_contig9997.17913.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at S-dermatodea_contig9997:6475..7849+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCGCCCTCTGCAACCTGTCTTCGGGGGAGCACAAGGCACGGATTGTGGC
TGAGGGTGCCGTGCGCCCGCTCACGTTCCTCGCCCGGTTCCCTGACCTCG
AAATACAGCGATATGCGGCACTCGCGATCGCTGGCCTAGCCCTTGGAGAC
CATGGGAAGCCGTCAAACAAGCTCCGGATAACGGAAGAGGGGGCGCTGAA
ACCCTTGGTTGACCTTGTCCGCTTCCCAGAAGTTGAGGTGCAGAGGTGCG
CGTGCCTCGCTGTAAACGCCATCGCGCTCGGTACGCACGCTTCCACCAAG
TCGGCGGTAATGCACGAAGAAGGGCTCCTACCGCTACTCGCGCTTGTAAA
TTCCGAAGATGGCGACTGTGTGCGAACGGCAGTGTACGTTTTGGGCTCCC
TCTGCGAGACCGATTCGGTGAAAGCGCGGCTCGTCGAGCTCGGGGCTGTC
GTAAACGTCGTCGGCCAGGCCAGTCTCGGCGACATCGAGGTGAAGCGCGC
CGCTGGTTACTTCCTTGCCCTCCTGAGTGAGACGCGGGAGTTTCACGACG
ACCTGGCCCGAGAGGGGGGGCTGCAGGCGGTTGTGGCCCTGGCGAACCTC
GAGGATGTAGAATGCCAAGAGTACGCCGCATTTTCATTGGCGCACCTGTC
CAGCAACCACGAGTACCAGCTCGCCCTCTGCAACCTGTCTTCGGGGGAGC
ACAAGGCACGGATTGTGGCTGAGGGTGCCGTGCGCCCGCTCACGTTCCTC
GCCCGGTTCCCTGACCTCGAAATACAGCGATATGCGGCACTCGCGATCGC
TGGCCTAGCCCTTGGAGACCATGGGAAGCCGTCAAACAAGCTCCGGATAA
CGGAAGAGGGGGCGCTGAAACCCTTGGTTGACCTTGTCCGCTTCCCAGAA
GTTGAGGTGCAGAGGTGCGCGTGCCTCGCTGTAAACGCCATCGCGCTCGG
TACGCACGCTTCCACCAAGTCGGCGGTAATGCACGAAGAAGGGCTCCTAC
CGCTACTCGCGCTTGTAAATTCCGAAGATGGCGACTGTGTGCGAACGGCA
GTGTACGTTTTGGGCTCCCTCTGCGAGACCGATTCGGTGAAAGCGCGGCT
CGTCGAGCTCGGGGCTGTCGTAAACGTCGTCGGCCAGGCCAGTCTCGGCG
ACATCGAGGTGAAGCGCGCCGCTGGTTACTTCCTTGCCCTCCTGAGTGAG
ACGCGGGAGTTTCACGACGACCTGGCCCGAGAGGGGGGGCTGCAGGCGGT
TGTGGCCCTGGCGAACCTCGAGGATGTAGAATGCCAAGAGTACGCCGCAT
TTTCATTGGCGCACCTGTCCAGCAACCACGAGTACCAGGTTACGCTCGTC
GAGCTGGGTGCCCTCCGACCCTTGGTCAGCATGATGGCGGTCGAGGCCGA
GCCCCGCCATTACGCCGGACTTGCCCTCCTAAAGCTCGCCGACAACTTCG
AGAACCACATCCGCATCGCCGAAGAGGGCGGTATCCAGGCTCTCTTACGG
CTTGGTCGCGCGCGTTCCACAGACGAAGAGCTACAGTACAAGGCCGCCCT
CACCGTGGGTCATCTTGCATCTAACGCGGTCAAGATGCTGCCGAAAGGGA
AGACCAACGCAAACATAGGGTTTGGGGCAACGGTGCTGCAAAATAGCGCA
GATACTAAGGCTCGGCGAGCGCAGAAGCAGACTCAGGAGCATATGGAGCA
ATCCTTACGAGGGGGGTGAGTTACGCTCGTCGAGCTGGGTGCCCTCCGAC
CCTTGGTCAGCATGATGGCGGTCGAGGCCGAGCCCCGCCATTACGCCGGA
CTTGCCCTCCTAAAGCTCGCCGACAACTTCGAGAACCACATCCGCATCGC
CGAAGAGGGCGGTATCCAGGCTCTCTTACGGCTTGGTCGCGCGCGTTCCA
CAGACGAAGAGCTACAGTACAAGGCCGCCCTCACCGTGGGTCATCTTGCA
TCTAACGCGGTCAAGATGCTGCCGAAAGGGAAGACCAACGCAAACATAGG
GTTTGGGGCAACGGTGCTGCAAAATAGCGCAGATACTAAGGCTCGGCGAG
CGCAGAAGCAGACTCAGGAGCATATGGAGCAATCCTTACGAGGGGGGTGA
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