mRNA_S-dermatodea_contig9984.17903.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 5.890e-163 Identity = 262/312 (83.97%), Postives = 275/312 (88.14%), Query Frame = 1
Query: 1 WEIPRPPVSEIQAVRSTAGEA-GTKHTGSSTGRGQSSSGRLTATGHNGGRFVSRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
W +P+ QA G+A G GSS G GQ S+G + + G G F SRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKL SLIVHN TTTRSRL LTAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQGMQDFVKEPVLGLLKSVEDLAPEELM GMARGAGSLL HSVGGVANSVSLITGT SQNLTTLAMDKEYKLKRARRK+ARGENKD LDGIG+AGGSLARG+TDGVSGLIKNPL+GAE GG AGFAKGVGTGMLGLVVKPVVGVTDAATD+LQG+
Sbjct: 230 WPLPQEAFCSSQAGHPGGGKASGENIDGSSVGGGQGSTGMVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGLAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQGV 541
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 2.400e-158 Identity = 260/312 (83.33%), Postives = 275/312 (88.14%), Query Frame = 1
Query: 1 WEIPRPPVSEIQAVRSTAGE-AGTKHTGSSTGRGQSSSGRLTATGHNGGRFVSRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
W +PR QA G+ +G G S G GQ ++ + + G + G F SRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKL SLIVHN TTTRSRL LTAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQGMQDFVKEPVLGLLKSVEDLAPEELM GMARGAGSLL HSVGGVANSVSLITGT SQNLTTLAMDKEYKLKRARRK+ARGENKD LDGIG+AGGSLARG+TDGVSGLIKNPL+GAE GGFAGFAKGVGTGMLGLVVKPVVGVTDAATD+LQG+
Sbjct: 583 WPLPREAFCSSQAGHPGGGKPSGENADGGSVGGGQGTTAMVVSRGGSEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQGV 894
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA) HSP 1 Score: 226 bits (575), Expect = 5.520e-63 Identity = 131/262 (50.00%), Postives = 165/262 (62.98%), Query Frame = 1
Query: 184 VSSVKVRLSLQRAKDSFDNVY--VGVKPGQMLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLR----------GAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++ +VRLSLQR + V + QM+LD MMRMDSAHI L S I+HN T +L A HY +KQ LMLG+LEAFGNPVGL RG+ QG+QDF+ EPVLGL++SVE+L PEE AG+ARG GSLLKH+VGG+ANS S+I GT N+ LA+D EYK+KRA R E R +D + G+ + G + A G+ DGVSG+I +PLR GAEK GF +VG DAATDV QG+
Sbjct: 5288 IAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQGVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAGTIGTNVGNLALDTEYKVKRAVRLEERSPPQDLMAGLSSGGMAFAAGIGDGVSGIILDPLRQARGWPSTCQGAEKEGFVXXXXXXXXXXXXXXXXXMVGAADAATDVFQGV 5549
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A4D9D9K3_9STRA (FYVE-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K3_9STRA) HSP 1 Score: 223 bits (567), Expect = 6.400e-62 Identity = 125/274 (45.62%), Postives = 170/274 (62.04%), Query Frame = 1
Query: 163 VYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARG-----------------ENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+ +E ++ + V LSL R ++S ++VYVG+KP +ML D++ R+D A + L V T S L+ AR HY RE+K+ F MLGSL A G PV L+RG+G+G DFV +P+ L++SVE L PE G+ RG SLLKH+VGGVA+S S + + L+ LA DKEY+L R R +E D L+G+G G L RG+ DGV+G++ P+RGAE+ GF G KG+G MLGLVVKPVVG+ DAA+DVLQG+
Sbjct: 3958 ILVEELRIEPLSVNLSLSRPRESPEDVYVGLKPNKMLSDMLNRLDEARLNLQPFEVSFLLTPASHLLWLARVHYAREVKRHVFSMLGSLRALGKPVTLIRGIGKGASDFVSQPIQSLVRSVELLDPEIFFQGVGRGTDSLLKHTVGGVASSASCVMENVGKQLSCLAFDKEYRLARERGREGEAGXXXXXXXXXXXXXXXXRPADVLEGLGLGGKRLMRGLVDGVTGVVAAPVRGAEREGFRGMVKGMGKXMLGLVVKPVVGLADAASDVLQGV 4231
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.610e-55 Identity = 106/225 (47.11%), Postives = 150/225 (66.67%), Query Frame = 1
Query: 268 MLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRAR---RKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++D ++R + A + + + N T ++ HY L+ +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P ++ G+ARG GSL +H++GGVA+S SL+T T S+N+ L +D+ Y KR R + G +DGIG L +GV DGVSG+I+ P+RGAEKGG GFAKGVG G+LGLVVKPVVG++DAATD++ G+
Sbjct: 280 IIVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGV 504
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.260e-54 Identity = 106/225 (47.11%), Postives = 150/225 (66.67%), Query Frame = 1
Query: 268 MLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRAR---RKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++D ++R + A + + + N T ++ HY L+ +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P ++ G+ARG GSL +H++GGVA+S SL+T T S+N+ L +D+ Y KR R + G +DGIG L +GV DGVSG+I+ P+RGAEKGG GFAKGVG G+LGLVVKPVVG++DAATD++ G+
Sbjct: 491 IIVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGV 715
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A7S0CCM6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCM6_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.320e-51 Identity = 101/222 (45.50%), Postives = 148/222 (66.67%), Query Frame = 1
Query: 268 MLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++D ++R +SA + + +N + +L HY + + GSL AFGNPVGL+RG+G G+ DFV EP+ GL KSV +L P + G+ARG GSL +H+VG +A S SL+T T S+N+ L +D++Y +R R+ R E +F++G+G+ G +GV DGV+G+ + P+RGAEK G GFAKGVG G+LGL+VKPV+G+TDAATDV+ G+
Sbjct: 375 IVVDALLRCESAVLVFPGIAFNNHNSNTQQLTTHLAAHYLAAFRGNLPALFGSLSAFGNPVGLIRGLGDGVSDFVSEPIKGLKKSVAELDPIFALDGVARGTGSLARHTVGSIAGSASLLTETLSKNMAVLTLDRKYAQRRDRKSLDR-EGGNFVEGVGSGGVKFFKGVMDGVTGVYRAPMRGAEKRGVEGFAKGVGKGLLGLLVKPVIGLTDAATDVMIGV 595
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A7S1XZQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ2_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.110e-48 Identity = 103/275 (37.45%), Postives = 156/275 (56.73%), Query Frame = 1
Query: 130 GHNGGRFVSRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKP------GQMLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLK-RARRKEARGENKDFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
G GG + Y E+ Q+ V+ S + +K + L+D++ RM+ A I+L +V + L + +HYERE+++ M+G+L GNPVGL+R + +G +DFV EP+ GLL SVE P L+ GM +G SLL++SVGGVANS SL+T S ++ L MDK ++K + RR+E + + ++G+GA S AR + +GVSG++ P+ GA+KGG G KG+G VG++DAATDVL+G+
Sbjct: 5 GCGGGGAAAGLKYFELLQIDRVRFWASFKNSKSGAADAAAATAAQPKSTLASTLMDIVGRMEEARIRLKPFVVKDFFGVADGLSVQLYQHYEREIRRHFLEMIGALHLLGNPVGLMRSLREGAKDFVAEPMHGLLASVEQAKPAHLVKGMRKGTTSLLRNSVGGVANSASLLTDMLSNQVSNLTMDKADRMKHQTRREETERQQSNVINGLGAGTRSFARSLFEGVSGVVTKPIEGAKKGGAVGMVKGLGXXXXXXXXXXXVGISDAATDVLRGV 279
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: A0A1E7EIG7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIG7_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.500e-48 Identity = 97/226 (42.92%), Postives = 147/226 (65.04%), Query Frame = 1
Query: 268 MLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEAR--GENKDFLDGIGAAGG--SLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++D ++R+ A + + + N T ++L HY LK +LGSL A GNP+GL+RG+G G+ DFV EP+ G +S+++L P + G+ARG SL +H+VGG+A+S SL+ TFS+NL + +D+ Y KR RR+ R ++K L G G G L +G +GV+G+++ P+RGAEK G GF KG+G G+LGL+VKP++G+TDAATDV+ G+
Sbjct: 119 IVVDALLRLSGASLNFHGVFLRNHIATSNQLFTYLAAHYLTSLKHNVPALLGSLSAIGNPLGLIRGIGDGVSDFVTEPMKGFKRSLKELDPGYAVDGVARGTESLARHTVGGLADSASLLMETFSKNLAVVTLDRRYAQKRDRRRSLRLKSDSKVTLAG-GVESGFMKLVQGFKEGVTGVVRAPIRGAEKRGLEGFCKGIGKGLLGLLVKPIIGITDAATDVMIGV 343
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Match: B7G5J2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5J2_PHATC) HSP 1 Score: 179 bits (455), Expect = 5.790e-47 Identity = 96/223 (43.05%), Postives = 146/223 (65.47%), Query Frame = 1
Query: 268 MLLDLMMRMDSAHIKLGSLIVHNATTTRSRLILTAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMAGMARGAGSLLKHSVGGVANSVSLITGTFSQNLTTLAMDKEYKLKRARRKEARGENK-DFLDGIGAAGGSLARGVTDGVSGLIKNPLRGAEKGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDVLQGM 933
+++D ++R+D A + L + + N +T S+L HY L+Q +L S+ AFGNP+GL R +G G+ DFV EPV G +SV+++ LM G+ARG SL +H+ G+A+S + IT TFS+N+T L +D+ Y KR R + R + + G+G+ LA G +GV+G+++ P+RGAEK GF GFAKG+G G+LGL+VKPV+G++D TDV+ G+
Sbjct: 4142 IVVDALLRLDGASLNLAGVCLRNHVSTSSQLSTHLGAHYLASLRQNVPALLASMAAFGNPLGLARSLGDGVSDFVLEPVKGFQRSVQEMDATYLMDGVARGTVSLARHTFSGIADSAASITETFSKNMTVLTLDRRYAQKRDRGENLRHQTDINVALGLGSGVQKLALGFVEGVTGVVQAPMRGAEKRGFEGFAKGIGKGLLGLLVKPVIGLSDGITDVMIGV 4364 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9984.17903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9984.17903.1 >prot_S-dermatodea_contig9984.17903.1 ID=prot_S-dermatodea_contig9984.17903.1|Name=mRNA_S-dermatodea_contig9984.17903.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=311bp WEIPRPPVSEIQAVRSTAGEAGTKHTGSSTGRGQSSSGRLTATGHNGGRFback to top mRNA from alignment at S-dermatodea_contig9984:650..7804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9984.17903.1 ID=mRNA_S-dermatodea_contig9984.17903.1|Name=mRNA_S-dermatodea_contig9984.17903.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7155bp|location=Sequence derived from alignment at S-dermatodea_contig9984:650..7804- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9984:650..7804- >mRNA_S-dermatodea_contig9984.17903.1 ID=mRNA_S-dermatodea_contig9984.17903.1|Name=mRNA_S-dermatodea_contig9984.17903.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at S-dermatodea_contig9984:650..7804- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |