mRNA_S-dermatodea_contig9962.17887.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: D8LS77_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS77_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.170e-70 Identity = 111/133 (83.46%), Postives = 125/133 (93.98%), Query Frame = 1
Query: 19 PVSTKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
P + K++V+DLADS +L+GKRVFVRVDLNAPLSKD+PP VTDATRLSAACPTI FLADKGAKVILASHLGRPKKQVV+ LRM+PVAAKLSELLGKEVIKMDDC+G+ VEERI+SMG GE+MLLENVRFH+GEE
Sbjct: 4 PTNAKADVRDLADSTDLTGKRVFVRVDLNAPLSKDSPPAVTDATRLSAACPTITFLADKGAKVILASHLGRPKKQVVDSLRMDPVAAKLSELLGKEVIKMDDCIGTTVEERISSMGNGEIMLLENVRFHSGEE 136
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: D8LS78_ECTSI (Phosphoglycerate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS78_ECTSI) HSP 1 Score: 218 bits (555), Expect = 2.380e-67 Identity = 106/134 (79.10%), Postives = 125/134 (93.28%), Query Frame = 1
Query: 16 GPVSTKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
GPVS+K+++ DLADS +L+GKRVFVRVDLNAPLSKD+PP VTDATRL ACPTI+FLA +GA+VILASHLGRPKK+VV+ LRM+PVAA+LS LLGKEVIKMDDCVG+AVEERI+SMG G++MLLENVRFH+GEE
Sbjct: 3 GPVSSKADIHDLADSTDLTGKRVFVRVDLNAPLSKDSPPAVTDATRLKGACPTIEFLAGQGARVILASHLGRPKKKVVDSLRMDPVAARLSALLGKEVIKMDDCVGAAVEERISSMGNGDIMLLENVRFHSGEE 136
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: A0A836CP82_9STRA (Phosphoglycerate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP82_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.040e-53 Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 1
Query: 16 GPVSTKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
GPVSTK NV+DLA +V+L GKRV VRVDLNAPL+K P +VTD TRL AA PTI FL + GAKVIL SHLGRPK +VV+ +R+ PVAA+L ELLG +V+K DDC+G VE+ IA + AG V LLENVRFHAGEE
Sbjct: 3 GPVSTKKNVEDLAAAVDLQGKRVLVRVDLNAPLTKSAPYSVTDDTRLRAALPTINFLKEHGAKVILVSHLGRPKDKVVDSMRLTPVAARLQELLGSDVLKTDDCIGPEVEQAIADLPAGGVALLENVRFHAGEE 136
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: A0A7S2V0E7_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0E7_9STRA) HSP 1 Score: 154 bits (388), Expect = 8.210e-44 Identity = 78/135 (57.78%), Postives = 95/135 (70.37%), Query Frame = 1
Query: 13 GGPVSTKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
G P +K N++DLA + L GK+VFVRVDLN PLSK+ TVTD TR+ PTI FL +K AKVI+ SHLGRPK +V + R+ PV +LSELLG V K DDCVG AVE + M G+V+LLEN RF+AGEE
Sbjct: 78 GKPKGSKMNIEDLASIISLEGKKVFVRVDLNVPLSKEDGTTVTDDTRIRGVVPTISFLINKKAKVIMCSHLGRPKGKVNDAFRLTPVIPRLSELLGVPVQKADDCVGEAVESLVNGMNPGDVLLLENCRFYAGEE 212
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: PGK_SYNP2 (Phosphoglycerate kinase n=9 Tax=unclassified Synechococcus TaxID=2626047 RepID=PGK_SYNP2) HSP 1 Score: 153 bits (386), Expect = 2.710e-42 Identity = 78/129 (60.47%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 31 KSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
K +V +L ++ +LSGKRVFVRVD N PL++ +TD TR+ AA PTIK+L +KGAKVIL SH+GRPK QVV+ +R+ PVAA+LSELLG+ V K DDCVG AV + IA++G G+V LLEN+RF+ GEE
Sbjct: 3 KKSVANLTEA-DLSGKRVFVRVDFNVPLNESG--VITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANLGNGQVALLENLRFNPGEE 128
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: A0A350XZV2_9CYAN (Phosphoglycerate kinase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11370 TaxID=2055769 RepID=A0A350XZV2_9CYAN) HSP 1 Score: 147 bits (372), Expect = 5.920e-42 Identity = 79/130 (60.77%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 28 TKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
+K V DL +S +L+GKRV VR DLN PL D T+TD TR+ AA PT++ L +KGAKVIL SHLGRPK QV E LR+ PVA +LSELLG+ V+K DDC+G AV +IA M G+V LLEN+RFH GEE
Sbjct: 2 SKKTVADLNES-DLAGKRVLVRADLNVPL--DDNGTITDDTRIRAALPTVQDLINKGAKVILCSHLGRPKGQVKESLRLTPVANRLSELLGQAVVKCDDCIGDAVAAQIAGMQNGQVALLENLRFHVGEE 128
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: A0A7S2V133_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V133_9STRA) HSP 1 Score: 147 bits (370), Expect = 9.230e-42 Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 28 TKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
TK NV+ LA V L GK+VFVRVDLN PLSK+ TVTD TR+ PT+ +L +GA+VIL SHLGRPK +V + R+NPV A+LSEL+G +V K DD VG AV+ + M G V+LLEN RFH GEE
Sbjct: 22 TKLNVEGLAARVPLRGKKVFVRVDLNVPLSKEDGVTVTDDTRIRGVVPTVSYLVGQGARVILCSHLGRPKGEVNDAFRLNPVVARLSELVGVQVQKADDTVGEAVQAMVDGMQDGSVLLLENCRFHKGEE 151
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: UPI001A071E6A (Phosphoglycerate kinase n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI001A071E6A) HSP 1 Score: 149 bits (375), Expect = 1.210e-40 Identity = 79/130 (60.77%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 28 TKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
+K V +L+ S +LSGKRVFVRVD N PL D +TD TR+ AA PTI++L GAKV+LASH GRPK +VV+ +R+ PVA +LSELLGKEVIK DDC+G AV IA M G+V LLENVRF+A EE
Sbjct: 2 SKKTVANLS-SADLSGKRVFVRVDFNVPL--DDQGNITDDTRIRAALPTIQYLTSNGAKVVLASHFGRPKGKVVDSMRLTPVAKRLSELLGKEVIKCDDCIGDAVTSAIAGMQNGQVALLENVRFYAEEE 128
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: UPI001581167F (phosphoglycerate kinase n=1 Tax=Mesobacillus harenae TaxID=2213203 RepID=UPI001581167F) HSP 1 Score: 148 bits (374), Expect = 1.490e-40 Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 31 KSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
K +V+D +E+ GKRVF RVD N P+S VTD TR+ AA PTI+FLADKGAKVILASHLGRPK QVVE LR+ PVA +LSELLGK V K D+ G AV+ I SM G+V+LLENVRF+ GEE
Sbjct: 3 KKSVKD----IEVKGKRVFCRVDFNVPMSDGK---VTDDTRIRAALPTIQFLADKGAKVILASHLGRPKGQVVEELRLTPVAGRLSELLGKSVKKTDEAYGDAVKSEIDSMSEGDVLLLENVRFYPGEE 124
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Match: A0A1K1PP87_9BACL (Phosphoglycerate kinase n=11 Tax=Paenibacillus TaxID=44249 RepID=A0A1K1PP87_9BACL) HSP 1 Score: 147 bits (371), Expect = 4.040e-40 Identity = 76/129 (58.91%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 31 KSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATRLSAACPTIKFLADKGAKVILASHLGRPKKQVVEGLRMNPVAAKLSELLGKEVIKMDDCVGSAVEERIASMGAGEVMLLENVRFHAGEE 417
K +V+D VE+ GKRVFVRVD N PL +TD TR+ PTIK+L ++GAKVILASHLGRPK QV E LR+ PVAA+LSELLGK V+K D+ +G AV+ ++A++ G+V+LLENVRF+AGEE
Sbjct: 3 KKSVRD----VEVGGKRVFVRVDFNVPLENGR---ITDDTRIRETLPTIKYLTERGAKVILASHLGRPKGQVAEELRLTPVAARLSELLGKPVVKADEAIGEAVKAQVAALNDGDVLLLENVRFYAGEE 124 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9962.17887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9962.17887.1 >prot_S-dermatodea_contig9962.17887.1 ID=prot_S-dermatodea_contig9962.17887.1|Name=mRNA_S-dermatodea_contig9962.17887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp MSSEGGPVSTKSNVQDLADSVELSGKRVFVRVDLNAPLSKDTPPTVTDATback to top mRNA from alignment at S-dermatodea_contig9962:103..3399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9962.17887.1 ID=mRNA_S-dermatodea_contig9962.17887.1|Name=mRNA_S-dermatodea_contig9962.17887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3297bp|location=Sequence derived from alignment at S-dermatodea_contig9962:103..3399- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9962:103..3399- >mRNA_S-dermatodea_contig9962.17887.1 ID=mRNA_S-dermatodea_contig9962.17887.1|Name=mRNA_S-dermatodea_contig9962.17887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at S-dermatodea_contig9962:103..3399- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |