|
|
Homology
BLAST of mRNA_S-dermatodea_contig995.17874.1 vs. uniprot
Match: D7FNH3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH3_ECTSI) HSP 1 Score: 353 bits (907), Expect = 5.740e-100 Identity = 363/906 (40.07%), Postives = 450/906 (49.67%), Query Frame = 1
Query: 190 AADCIQHAW-RASREQQVVARVTGSVSVIQKSWRMHSRRRRAGSQAVRAWRRRARVRARTLDQALIEAAGEGDLRAVAFLLR-PAVGWKAG--------ADANAT-DVDRATALHAACRGR------------------------QTEIKTKGTTDQTPSV-----SGLGAIGDDSPANAGGGGGE-----RTHA-DWVGVIRALVEAGASVEAKDVWGFTPILTAAGTAGGQIVAALADLGAEVDISEDRSMKRTPLVIATQRANVSAAAALLEYGARVNLPAGDGLTPLHEAVGAGSVAIAEMMVRAGAQVDATSDSAXXXXXXXXXXXXXXXXXXXXXXXXXNVCLPDARXXXXXXXTVEMADAATLALLLSAERRADLSIEDENQGTVLHAACRLGLTDIAQLLLESGANPHARDAHGQTPELVALDLGHDECAGLFCQLEVGLFV-----LQSEKSESVPATSAGEESSEAMLLGERHGSGDTDVG---REDAPGVEVGKRDDEVNNAREEGGLVVEPERSGGEEEQQYGRLEPEDGAEWTLDTYREHGEEKIAKEHFPEAVDGAPLLSSGVLPA-DHQQVLTMSSVG----GGDETEWNPNQLIDGPDT-HSRGSVDQTETQEGGEWEWSSTEGW-------KGHPGVSEPSQAIVVIEGREPPPPAEPATAENGV---DHDLRDSESCSEMQLYSNENDVGESLIDESTHGWVQTP-DRKWEAEPT--AEEGGGICDDDPGGRGPENPADAGSGIVTYTPESYEH--EQGGESGGVDRREGNAQ---ETPAEVWRGGRGNDDAHQSEHDEYNDNKGSEEGEQSTALDAEPVLHNGLDGDEEMSRRGTMGWSGIAATLRAKHSWMSIVDRESGSVYYQNQRSGATQWEPPAEDGAVVVPE 2673
AA IQ A RA RE+++ AR + S S+IQ+ WR+ SRR RAG + VRAWR R R R TLD+AL+EAA EGDLRAVAFLL PA G AD NA D TALHAA G ++ + +G++ P SG GD S + G R HA +W GVI+ALVEAGA+VEA+D GFTP++TA + VAALA++GAEVD E R KRTP ARVNL GDGLTPLHEAVGAGS+ +AEM+VRAGA V+AT++SAXXXXXXXXXXXXXXXXXXXXXXXXX VCLPDAR T+EMADA T+ALLL+AE ADLS+ DEN GTVLHAACRLGLTDIA+LLLE GA+PH RDA G+TPELVALDL H +CAGLF +++ + + S+ S A GE E E G+ +G +D G + + + +R +E R E E+ W D RE F EAV A SS +PA D +V S +G G TE + + G D + RG VD E EG EW WS EGW G P S + E P E A+ + + H D + + Y N +S + W + DR E E AEEGG GS T ES E+G E G NA + A G ++D +S H +GS EG +TA + NG + R + + I +A+ W+ +D SGSVYYQN+ SG TQW+ P ED VV E
Sbjct: 1107 AAATIQRALLRAPRERRIAARASNSASLIQRMWRLQSRRWRAGFRLVRAWRARNRARVATLDRALVEAASEGDLRAVAFLLHAPAATVTIGSWVRLGGAADVNAVAGNDHETALHAAAAGSGGWSGEGHRHAPTTGVEIRVRDGAESAVGRRGSSTLAPMAPAAAKSGTNLAGDLSDVDGQRNGSGHWLRGRGHAPNWAGVIQALVEAGAAVEARDRRGFTPMMTAGEKGSRETVAALANIGAEVDSKEVRGGKRTPXXXXXXXXXXXXXXXXXXXXARVNLTVGDGLTPLHEAVGAGSIDVAEMLVRAGANVNATNESAXXXXXXXXXXXXXXXXXXXXXXXXXXVCLPDARGLTCLRLTIEMADAPTVALLLAAEPPADLSVTDENGGTVLHAACRLGLTDIARLLLEHGADPHVRDARGRTPELVALDLDHGDCAGLFYNVDIHSYTPHDGGVGSDNSSKESAQRDGEARGEDNRRKENRHDGERGIGGSNSDDDSGTDTAQGP--AGXXXXXXXXXXQWDRDTAYQE----REETEEEGAWVADNLREG---------FAEAVAAARRASSLSMPAQDQAEVEGSSYIGEYAEGALNTEKSKSYESKGWDEGNGRGGVDAEE--EGSEWIWSEAEGWIRGAGSGSGDPAASRAQPPEAINEENRGPGTTEAASVADDLYTEPHQSADWQQSYDYSRYGASNSGSDSNNPGYRNSWAENERDRGTELERQEGAEEGGXXXX-------------GGSFEATIDAESASPGIEEGQEQGANKSFHPNADGINDVAAGDDAVGLDHEDGDKSGHGTSGSLEGSVEGMAATAR-----ISNG-----NANHRPSNAFGTIVEAAKARKRWIPQLDEVSGSVYYQNEESGLTQWDVP-EDAVVVAAE 1971
BLAST of mRNA_S-dermatodea_contig995.17874.1 vs. uniprot
Match: A0A6H5L5M5_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M5_9PHAE) HSP 1 Score: 296 bits (757), Expect = 1.810e-80 Identity = 320/901 (35.52%), Postives = 407/901 (45.17%), Query Frame = 1
Query: 190 AADCIQHA-WRASREQQVVARVTGSVSVIQKSWRMHSRRRRAGSQAVRAWRRRARVRARTLDQALIEAAGEGDLRAVAFLLRPAVG------WK---AGADANAT-DVDRATALHAACRG------------------------RQTEIKTKGTTDQTPSV----SGLGAIGD--DSPANAGGGG----GERTHADWVGVIRALVEAGASVEAKDVWGFTPILTAAGTAGGQIVAALADLGAEVDISEDRSMKRTPLVIATQRA-NVSAAAALLEYGARVNLPAGDGLTPLHEAVGAGSVAIAEMMVRAGAQVDATSDSAXXXXXXXXXXXXXXXXXXXXXXXXXNVCLPDARXXXXXXXTVEMADAATLALLLSAERRADLSIEDENQGTVLHAACRLGLTDIAQLLLESGANPHARDAHGQTPELVALDLGHDECAGLFCQLEVGLFVLQ-----SEKSESVPATSAGEESSEAMLLGE-RHGSGDTDVGR-EDAPGVEVGKRDDEVNNAREEGGLVVEPERSGGEEEQQYGRLEPEDGAEWTLDTYREHGEEKIAKEHFPEAVDGAPLLSSGVLPADHQQVLTMSSVGGGDE----TEWNPNQLIDG-PDTHSRGSVDQTETQEGGEWEWSSTEGW-------KGHPGVSEPSQAIVVIEGREPPPPAEPATAENGVDHDLRDSESCSEMQLYSN---ENDVGESLIDESTHGWVQTP-DRKWEAEPT--AEEGGGICDDDPGGRGPENPADAGSGIVTYTPESYEHEQGGESGGVDRREGNAQETPAEVWRGGRGNDDAHQSEHDEYNDNKGSEEGEQSTALD--AEPVLHNGLDGDEEMSRRGTMGWSGIAATLRAKHSWMSIVDRESGSVYYQNQRSGATQWEPPAEDGAVVVPE 2673
AA IQ A WRA RE+++ AR + S S+IQ+ WR+ SRR RAG + VRAWR R R R TLD+AL+EAA EGDLRAVAFLL P W +D NA D TALHAA G + + +G++ P SG GD D G G +W GVI+ALVEAGA+VEA+D GFTP++TA + VAALA+ GAEVD E R KRTPLVIA QRA N + +A G+TPLH AV A A ++V +GA NVCLPDAR ++EMADA T+ALLL+AE ADLS++DEN GTVLHAACRLGLTDIA+LLLE GA+PHARDA G+TPELVALDL H +CAGLF +++ ++ + ES P GE E E RHG D D +D G++ +R E + + Q A W D RE F EAV A SS +PA V S +G E TE + + G + + RG VD E EG EW WS EGW G P S E P E A + + R S + YS+ N +S + W + DR E E AEEGG D GG G + + + S E+G E G NA + + G+D + D G+ E + A + NG + + R ++ + I + ++ W+ VD SGSVYYQN+ SG TQW+ P ED VV E
Sbjct: 1242 AAVTIQRALWRAPRERRIAARASNSASLIQRMWRLQSRRWRAGFRLVRAWRARVRARVATLDRALVEAASEGDLRAVAFLLHPPAATVTIGSWVRLGGASDVNAVAGSDSETALHAAAAGGGGWSGEDHRHAPATWVENRVRDGAEAAVGRRGSSTLAPMAPAAKSGTNLAGDLSDVDGRRDDSGHWLRGRGNAPNWAGVIQALVEAGAAVEARDRRGFTPMMTAGEKGNRETVAALANSGAEVDAKEARGGKRTPLVIAAQRAVNATNESA--------------GMTPLHLAVVNDQHAAARLLVHSGA----------------------------------NVCLPDARGLTCLRLSIEMADAPTVALLLAAEPPADLSVKDENGGTVLHAACRLGLTDIARLLLEHGADPHARDARGRTPELVALDLDHGDCAGLFYNVDIHSYIPNDGGGDNSSKESTPWD--GEARGEDNRRNENRHGERDIDGSNSDDDSGIDKAQRAAEGAAVXXXXXXXXXXXKWDRDTAYQXXXXXXXXXA-WATDNLREG---------FAEAVGAARRASSLSMPAQ-AGVEGSSYIGEYTERALHTEISKSYESKGWHEGNGRGGVDAEE--EGPEWIWSEVEGWIRGAGSGSGDPAASRAQPPAAPNEDNRGPGATEAAAVAGDLYTEPRQSADWQQSYDYSSYGATNGGSDSNDPGYRNSWAEYERDRGTELERQEGAEEGG-----DYGGGG------SFAATIEANSASPGIEEGQEQGANMPFYPNADD----INNVAAGDDVMGLDDEDGDKGGDGTSESLEGXXXGTVATTRISNG-----DANHRPSIEFGTIVEAAKTRNRWIPQVDEVSGSVYYQNEESGLTQWDVP-EDAVVVAAE 2058
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 372.9 |
| Seed ortholog evalue | 4.3e-100 |
| Seed eggNOG ortholog | 2880.D7FNH3 |
| KEGG ko | ko:K21440 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 2673 |
| Cds size | 2673 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig995.17874.1 >prot_S-dermatodea_contig995.17874.1 ID=prot_S-dermatodea_contig995.17874.1|Name=mRNA_S-dermatodea_contig995.17874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=891bp
MHAQGQLLRSTLSFGSSPANTTTPLDLATAKMATGVVDAFKAQPGSTTGA
FRRRKADAPKPAVAADCIQHAWRASREQQVVARVTGSVSVIQKSWRMHSR
RRRAGSQAVRAWRRRARVRARTLDQALIEAAGEGDLRAVAFLLRPAVGWK
AGADANATDVDRATALHAACRGRQTEIKTKGTTDQTPSVSGLGAIGDDSP
ANAGGGGGERTHADWVGVIRALVEAGASVEAKDVWGFTPILTAAGTAGGQ
IVAALADLGAEVDISEDRSMKRTPLVIATQRANVSAAAALLEYGARVNLP
AGDGLTPLHEAVGAGSVAIAEMMVRAGAQVDATSDSAGMTPLHLALANGQ
YAAARLLVHAGANVCLPDARGMTPLRLTVEMADAATLALLLSAERRADLS
IEDENQGTVLHAACRLGLTDIAQLLLESGANPHARDAHGQTPELVALDLG
HDECAGLFCQLEVGLFVLQSEKSESVPATSAGEESSEAMLLGERHGSGDT
DVGREDAPGVEVGKRDDEVNNAREEGGLVVEPERSGGEEEQQYGRLEPED
GAEWTLDTYREHGEEKIAKEHFPEAVDGAPLLSSGVLPADHQQVLTMSSV
GGGDETEWNPNQLIDGPDTHSRGSVDQTETQEGGEWEWSSTEGWKGHPGV
SEPSQAIVVIEGREPPPPAEPATAENGVDHDLRDSESCSEMQLYSNENDV
GESLIDESTHGWVQTPDRKWEAEPTAEEGGGICDDDPGGRGPENPADAGS
GIVTYTPESYEHEQGGESGGVDRREGNAQETPAEVWRGGRGNDDAHQSEH
DEYNDNKGSEEGEQSTALDAEPVLHNGLDGDEEMSRRGTMGWSGIAATLR
AKHSWMSIVDRESGSVYYQNQRSGATQWEPPAEDGAVVVPE back to topmRNA from alignment at S-dermatodea_contig995:118..6924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig995.17874.1 ID=mRNA_S-dermatodea_contig995.17874.1|Name=mRNA_S-dermatodea_contig995.17874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6807bp|location=Sequence derived from alignment at S-dermatodea_contig995:118..6924+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCATGCACAGGGCCAGCTCCTTCGATCGACGCTGTCATTCGGTTCTTC
ACCCGCGAACACGACCACACCTCTAGACCTCGCGACCGCCAAAATGGCCA
CCGGAGTCGTCGACGCGTTTAAAGCGCAACCTGGTAGCACCACTGGCGCG
TTCCGCAGACGCAAGGCGGACGCCCCAAAACCTGCCGTTGCCGCCGATTG
CATTCAGCATGCTTGGAGAGCGTCACGCGAGCAACAAGTGGTCGCGAGAG
TTACCGGCAGTGTTTCAGTTATACAGAAATCCTGGAGGATGCACTCCAGA
AGGCGCCGTGCAGGATCTCAAGCGGTACGGGCTTGGCGCCGACGAGCCCG
CGTCCGGGCACGAACGCTCGACCAGGCGCTCATCGAGGCGGCAGGTGAAG
GAGATTTGCGTGCCGTTGCTTTCCTGCTGCGTCCCGCGGTGGGGTGGAAA
GCAGGGGCCGACGCAAACGCGACGGACGTCGACAGAGCGACCGCCCTGCA
TGCAGCTTGTCGAGGGCGGCAGACGGAGATAAAAACAAAAGGCACAACCG
ACCAAACTCCATCCGTCTCCGGACTGGGAGCGATTGGAGACGACTCACCG
GCGAACGCGGGTGGCGGTGGCGGAGAAAGAACTCACGCCGACTGGGTCGG
AGTTATACGGGCTTTGGTGGAAGCGGGGGCGTCCGTGGAAGCCAAGGATG
TGTGGGGGTTCACGCCAATACTAACAGCCGCTGGGACGGCGGGCGGACAG
ATCGTTGCTGCTCTAGCAGACCTCGGCGCGGAGGTCGACATATCGGAAGA
CAGAAGCATGAAAAGGACGCCGCTTGTCATCGCAACGCAGAGAGCTGTGA
GTATCGCGCGCTTCCGAGTTTCCCCCCCGCTTTCATCAGGCCAACCTTAA
ACCGCTCGTTTTCGCTTTCGTTCATTGTGCAGGTCCACAGTCGATTTTTG
TGACGTTGACACAGAGGGTGTAGCCCACGAGGATTGCACACAGCCGCTTC
CCGGCTAATGTCGACATTTTCTCGCATTTCACCTTTGGCGTTTTAGATGT
GTCGGTCTTCTTGCCGGTCAACACGTGGAGCATTGCTCTATTATCATAGA
ACGTAGGAGCGCAAGGGCCCAACAATCAGCAATGCACGTATTCGAGGGGT
GAGACAGAGCCTGTGCAGATTATGCCTCGGTGAACCTCGGCTGCCAGTCT
GCTAATGTCGGATTACTGCAAATGTTGGGGAAATGTTATTGAAAAATGCG
ACGCGAAGATCTCCTGAAGCCAACTAAATAGGGATGCTATCTGTCTGACG
CAAAACAGAACGTTTCGGCGGCGGCCGCTCTATTGGAGTACGGAGCCAGG
GTGAACCTCCCTGCCGGGGACGGATTGACGCCACTTCATGAGGCTGTCGG
AGCGGGAAGCGTTGCCATTGCGGAAATGATGGTTCGCGCAGGGGCTCAGG
TGTGCCCCGGTTTACCGAAGGGAATATATATTTATGAGTACACGACCCTC
TTTAGAGTATTTGGCTAATCTCCTCCATAAAACTATGTCGATGTTAGGTG
CGTACGATGCTAAACCATGCGGTGGTACCCAACGTTATCTATTTCTGGGG
GAGGTCGCGCTTTTCTCGAGACGAACAGCCTCTGCCTGAGCGTGGGGCGA
TAATGTACGGAGCGGTGTTTACCCAATTTCGTCGAACCGCAGGTCTGCCA
AAGCATCTCTCCATTTTTACCACGTATCATTTCTCCATTGACGCGATCGT
GCACACGCCCAAAGGTTGACGCAACAAGCGACTCGGCGGGAATGACGCCA
CTCCACTTAGCCCTTGCGAACGGCCAGTACGCGGCTGCCCGCCTCCTTGT
CCACGCTGGTGCTAACGTTTGCCTGCCGGACGCCCGGGGTATGACGCCGC
TTCGACTGACGGTCGAGATGGCCGACGCTGCTACCTTGGCCCTCCTGCTT
TCTGCCGAAAGGCGTGCGGATCTGAGCATCGAAGACGAGGTGCGATAACG
TCGCGCCATAATTGAGTCTAAAAAACAAAATGGCGGACGGTAACTGGTAC
TTGTGTTCTACACGTCTTGGCCGTGTCCCGGTTTGCCTCTACTCCGACGT
TCTATACTGAGAGCGAGCAAAACGTGTTGCGGTGTCGTGGTGGATTGGAA
GTCATACTGTCGATTGACTCTGACGGCTCGTGTGTGCTTAAACGAATTTC
ACCACCTGCACCTCTTCGAGTGGTAACTCGTGCCAACGCCTTTGGGCATG
TCGAACGGGAAAAATGCAGTAGTGTCTGCCTTCACCTTTCGATGCGCTCC
TTGTCCTTATCTTACCCACAGCACGATTTTATAATGTTGTGTATGAAATT
TCGCCAGCAGTATGCATGCCTGTGTGCACTGTCGGGCTCTCACGCATTCG
CTGTCTCAAATCCGTCTACATTTCAAGTCGTGCACTCGTCCTCTCTTCGC
GCTGCCTGCTGTGTTACAGAATCAAGGAACGGTTCTCCACGCCGCCTGCA
GGCTCGGCTTAACAGATATTGCGCAGCTTCTTCTTGAATCCGGTGCAAAC
CCACACGCGAGGGACGCACATGGACAAACGCCCGAGCTCGTGGCTCTTGA
CCTGGGACACGACGAGTGTGCAGGACTCTTCTGCCAGCTGGAAGTTGGTC
TTTTTGTACTACAGAGCGAGAAGAGCGAGAGCGTGCCGGCCACAAGCGCC
GGCGAAGAGTCGTCCGAAGCGATGCTACTCGGAGAGCGCCACGGTAGCGG
CGACACGGACGTGGGGAGGGAAGACGCGCCGGGCGTGGAGGTAGGGAAGC
GGGATGATGAAGTCAACAACGCCAGAGAAGAAGGTGGCCTAGTGGTCGAG
CCGGAACGCTCAGGCGGTGAGGAAGAGCAGCAATATGGGAGGCTGGAACC
GGAGGACGGGGCGGAATGGACACTGGACACCTACCGAGAACATGGAGAAG
AGAAAATCGCAAAAGAACACTTTCCCGAGGCTGTTGATGGGGCACCTCTG
CTATCTTCCGGCGTCCTCCCAGCCGACCACCAACAAGTGTTGACGATGTC
TTCGGTGGGTGGGGGAGATGAAACCGAATGGAATCCGAACCAGCTTATTG
ACGGACCCGACACCCACTCAAGAGGGAGCGTGGACCAGACAGAGACGCAG
GAAGTAGAGCAGCCGACAGCAGAGTCGAGGGAGCACACTGAAGCGGAGTA
TGTAGAAGAAGGTACCGTGGTCCAGGGTGGGGAGGGCGACGAGTGGGAAT
GGTCGTCAATCGAGGGGTGGAGGCGACACTTCGGTCTAGGTGAGACTTCG
CAAGCTGTTGTAGTCTTCGAGGGAGGGGGGGCGCCACCCCCTGCAGAGCC
CGCGACTGCAGAAAATGGCGTAGACCACGACTTGCGTCAGAGCGAATCAT
GCTCGGAGATGCAATTGTATAGCAACGAAAACGGCGTTGGTGGGAGCCTG
AACGATGAAAGTACGCATGGATGGGTTCAGACACCGGGCGGGAAATGGGA
AGCAGAACCGATTGTCGAAGAAGGAGGAAGAAGTTGCGACGACGACCTGG
GAGGAACGGATCCCGAAAATCCAGCCGATACACGCAACGGCATTCTCACG
TACACCCCGGAAAGCTACAAGCACGAGCAGGGTAGGGAGAGCGGCGGAGT
CGATCGCTGGGGTGCGGCTGCGCACGCCGAAGGTGAGCAGGAGCAGACAA
AATCCGGACAAGTGCCAGACGGCAAAAGCGAGAGCCTACCCTTGAATGCT
GAGTATCCTAGCCTCGAAAGCGGCGGTAACGGGTTGCAAGAAGGAGGATA
CCAAGATGTTGAAGCATCGTTTGGCTCATACGAGAGGTCCCCGTTATCTG
AAGGACGCCCCGACGTCTCGGTCAAAGAAGAAAACGCACAGGAAATACCA
CGCTCAGGTCGTGCGGAAGAGCAGCAGTACGGGGGGTACGAACAGCAGGA
CGGTGTGGAGTGGACACCAGACGCCGACCGAGAAAACGGAGAAAACCAAA
GCGTACAAGAAGATTTCCCCGTGGTTGTTGGGGCAGCCCGACTATCTTCC
GGCGCAAGTGATCCTTCGCGAGCCATTGTAGTCTTCGAGGGAGGGGGGGC
ACCACCCCCTGCAGAGCCCGCGACTGCAGAAAATAGCGTAGACCATGACC
TGCGTCAGAGCGAATCATACTCGGAGATGAAATTGCATAGCGACGAAAAC
GGCGTCGGTGGGAGCCTGAACGATGAAAACACGCACGGTTGGATTCAGAC
GCCGGACGGGAAATGGGGAGCAGAACCGATGGCCGAAGAGGGAGGAGGAA
GTTACGACGACGACCTGGGAGGAACGGATCCCGAAAATCCAGCCGATACA
CGCAACGGCATTCTCACGTACACCCCGGAAAGCTACAAGCACGAGCAGGG
TGGGGAGAGCGGCGAAGTCGATCGCTGGGGTGCAGCTGCGCACGCCGAAG
GTGTGCAGGAGCAGACAAAATCCGGACAAGTGCCAGACGGCAAAAGCGAG
AGCCTACCCTTGAATGCTGAGTATCCTAGCCTCGAAAGCGGCGGTAACGG
GTTGCAAGAAGGAGGATACCAAGATGTTGAAGCATCGTTTGGCTCATACG
AGAGGTCCCCGTTATCGAAAGGACGCCCCGACGTCTCGGCCAAAGAAGAA
AACGCACAGGAAATACCACGCTCAGGTCGTGTGGAAGAGCAGCAGTACGG
GGGGTACGAACAGCAGGACGGTGTGGAGTGGACACCGGACGCCGACCGAG
AAAACGGAGAAGACCAAAGCGTACAAGAAGATTTCCCCGTGGTTGTTGGG
GCAGCCCGACTATCTTCCGGCGCAAGTGATCCTTCGCGAGCCATTGTGGT
CTTCGAGGGAGGGAGGGCACCACTCCCAGCAGAGCCCGCGACTGCAGAAA
ATAGCTTAGACCATGACCTGCGTCAGAGCGAATCATACTCGGAGATGCAA
TTGCATAGCGACGAAAACGGCGTCGGTGGGAGCCTGAACGATGAAAGTAC
GCACGGTTGGATTCAGACACCGGACGGGAAATGGGGAGCAGAACCGATTG
TCGAAGAAGGAGGAAGAAGTTACGACGACGACCTGGGAGGAACGGATCCC
GAAAATCCAGCCGATACACGCAACGGCATTCTCACGTACACCCCGGAAAG
CTACAACCACGAGCAGGGTGGGGAGAGCGGCGGAGTCGATCGCTGGGGTG
CGGCTGCGCACGCCGAAGGTGAGCAGGAGCAGACAAAATCCGGACAAGTG
CCAGACGGCAGAAGCGAGAGCCTACCCTTGAATGCTGAGTATCCTAGCCT
CAAAAGCGGCGGTAACGGGTTGCAAGAAGGAGGATACCAAGATGTTGAAG
CATCGTTTGGCTCATACGAAAGGTCCCCGTTATCGGAAGGACGCCCCGAC
GTCTCGGTCAAAGAAGAAAACGCACAGGAAATACCACGCTCAGGTCGCAC
GGAAGAGCAGCAGTACGGGGGGTACGAACAGCAGGACGGTGCGGAGTGGA
CACCGGACACCGATCGAGAAAACGGAGAAGACCAAAGCGTACAAAACGAT
TTCCCCGAGGCTTTTGATAGGGCGCCTCGGCTATCTTCCGGCGTCCTCCC
AACCAACCACCAACAAGTGTTGACGATGTCTTCTGCGGGGGGGGGAGATG
AAACCGAAAGGAATCCGCACCAGCCCATTGGCGGATCCGACGTTCACTTG
AGAGAGAGCGTGGACCAGACAGCGACGATAGAAGTAGAGCAGCCGACAGC
AGAGTCGAGGGAGCACGCGGAAGCCGAGCATGTGGAAGAAGGGGCCGCGA
TCCAAGATGAGAAGGGCGGCGAGTGGGAATGGTCGTCAACCGAGGGGTGG
AAGGGACACCCCGGTGTAAGTGAGCCTTCGCAAGCCATTGTGGTAATTGA
GGGACGGGAGCCGCCACCCCCTGCCGAGCCCGCGACTGCAGAGAATGGCG
TAGACCACGACCTGCGTGATAGCGAATCATGCTCGGAGATGCAACTGTAT
AGCAACGAAAACGACGTCGGTGAGAGCCTGATCGATGAAAGCACGCACGG
ATGGGTTCAGACACCGGACAGGAAATGGGAAGCAGAACCGACAGCCGAAG
AAGGAGGAGGGATTTGCGACGACGACCCGGGAGGAAGGGGTCCCGAAAAT
CCAGCCGATGCAGGCAGCGGGATTGTCACGTACACTCCGGAAAGCTACGA
GCACGAGCAGGGTGGGGAGAGCGGCGGAGTCGATCGCCGAGGTGTGGCTG
CGCACGCCGAAGGTGAACAGGAGCAGACAGAATCCGGCCAAGTGCCAGAC
GGCAAAAGCGAAAGCCCACCCTTGAATGCTGAGTCTCCTAGCCTCGAAAG
CGGCGGTAGCGCTATGCAAGCAGGGGGGTACCAAGCTGTCGAAGCATCCT
TTGGCTCGTACGATAGGTCCTCGTTATCGGAAGGACGACCCGACGTCTCC
CTCAAAGAAGGAAACGCACAGGAAACCCCTGCCGAAGTGTGGCGGGGAGG
ACGCGGGAACGACGATGCACATCAATCGGAGCACGACGAATACAACGACA
ACAAGGGCAGTGAAGAGGGAGAGCAAAGCACGGCGCTAGATGCGGAGCCG
GTGCTCCACAATGGGTTGGATGGGGACGAGGAGATGAGCAGGAGGGGTAC
GATGGGATGGAGCGGCATCGCGGCTACCTTGCGAGCAAAACATTCCTGGA
TGTCCATCGTGGACAGGGAGTCAGGCAGTGTGTACTATCAGAATCAGAGG
TCTGGAGCGACACAGTGGGAGCCGCCGGCTGAAGATGGGGCTGTCGTTGT
GCCCGAA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig995:118..6924+ >mRNA_S-dermatodea_contig995.17874.1 ID=mRNA_S-dermatodea_contig995.17874.1|Name=mRNA_S-dermatodea_contig995.17874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5346bp|location=Sequence derived from alignment at S-dermatodea_contig995:118..6924+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCATGCACAGGGCCAGCTCCTTCGATCGACGCTGTCATTCGGTTCTTC
ACCCGCGAACACGACCACACCTCTAGACCTCGCGACCGCCAAAATGGCCA
CCGGAGTCGTCGACGCGTTTAAAGCGCAACCTGGTAGCACCACTGGCGCG
TTCCGCAGACGCAAGGCGGACGCCCCAAAACCTGCCGTTGCCGCCGATTG
CATTCAGCATGCTTGGAGAGCGTCACGCGAGCAACAAGTGGTCGCGAGAG
TTACCGGCAGTGTTTCAGTTATACAGAAATCCTGGAGGATGCACTCCAGA
AGGCGCCGTGCAGGATCTCAAGCGGTACGGGCTTGGCGCCGACGAGCCCG
CGTCCGGGCACGAACGCTCGACCAGGCGCTCATCGAGGCGGCAGGTGAAG
GAGATTTGCGTGCCGTTGCTTTCCTGCTGCGTCCCGCGGTGGGGTGGAAA
GCAGGGGCCGACGCAAACGCGACGGACGTCGACAGAGCGACCGCCCTGCA
TGCAGCTTGTCGAGGGCGGCAGACGGAGATAAAAACAAAAGGCACAACCG
ACCAAACTCCATCCGTCTCCGGACTGGGAGCGATTGGAGACGACTCACCG
GCGAACGCGGGTGGCGGTGGCGGAGAAAGAACTCACGCCGACTGGGTCGG
AGTTATACGGGCTTTGGTGGAAGCGGGGGCGTCCGTGGAAGCCAAGGATG
TGTGGGGGTTCACGCCAATACTAACAGCCGCTGGGACGGCGGGCGGACAG
ATCGTTGCTGCTCTAGCAGACCTCGGCGCGGAGGTCGACATATCGGAAGA
CAGAAGCATGAAAAGGACGCCGCTTGTCATCGCAACGCAGAGAGCTATGC
ATGCACAGGGCCAGCTCCTTCGATCGACGCTGTCATTCGGTTCTTCACCC
GCGAACACGACCACACCTCTAGACCTCGCGACCGCCAAAATGGCCACCGG
AGTCGTCGACGCGTTTAAAGCGCAACCTGGTAGCACCACTGGCGCGTTCC
GCAGACGCAAGGCGGACGCCCCAAAACCTGCCGTTGCCGCCGATTGCATT
CAGCATGCTTGGAGAGCGTCACGCGAGCAACAAGTGGTCGCGAGAGTTAC
CGGCAGTGTTTCAGTTATACAGAAATCCTGGAGGATGCACTCCAGAAGGC
GCCGTGCAGGATCTCAAGCGGTACGGGCTTGGCGCCGACGAGCCCGCGTC
CGGGCACGAACGCTCGACCAGGCGCTCATCGAGGCGGCAGGTGAAGGAGA
TTTGCGTGCCGTTGCTTTCCTGCTGCGTCCCGCGGTGGGGTGGAAAGCAG
GGGCCGACGCAAACGCGACGGACGTCGACAGAGCGACCGCCCTGCATGCA
GCTTGTCGAGGGCGGCAGACGGAGATAAAAACAAAAGGCACAACCGACCA
AACTCCATCCGTCTCCGGACTGGGAGCGATTGGAGACGACTCACCGGCGA
ACGCGGGTGGCGGTGGCGGAGAAAGAACTCACGCCGACTGGGTCGGAGTT
ATACGGGCTTTGGTGGAAGCGGGGGCGTCCGTGGAAGCCAAGGATGTGTG
GGGGTTCACGCCAATACTAACAGCCGCTGGGACGGCGGGCGGACAGATCG
TTGCTGCTCTAGCAGACCTCGGCGCGGAGGTCGACATATCGGAAGACAGA
AGCATGAAAAGGACGCCGCTTGTCATCGCAACGCAGAGAGCTAACGTTTC
GGCGGCGGCCGCTCTATTGGAGTACGGAGCCAGGGTGAACCTCCCTGCCG
GGGACGGATTGACGCCACTTCATGAGGCTGTCGGAGCGGGAAGCGTTGCC
ATTGCGGAAATGATGGTTCGCGCAGGGGCTCAGAACGTTTCGGCGGCGGC
CGCTCTATTGGAGTACGGAGCCAGGGTGAACCTCCCTGCCGGGGACGGAT
TGACGCCACTTCATGAGGCTGTCGGAGCGGGAAGCGTTGCCATTGCGGAA
ATGATGGTTCGCGCAGGGGCTCAGGTTGACGCAACAAGCGACTCGGCGGG
AATGACGCCACTCCACTTAGCCCTTGCGAACGGCCAGTACGCGGCTGCCC
GCCTCCTTGTCCACGCTGGTGCTAACGTTTGCCTGCCGGACGCCCGGGGT
ATGACGCCGCTTCGACTGACGGTCGAGATGGCCGACGCTGCTACCTTGGC
CCTCCTGCTTTCTGCCGAAAGGCGTGCGGATCTGAGCATCGAAGACGAGG
TTGACGCAACAAGCGACTCGGCGGGAATGACGCCACTCCACTTAGCCCTT
GCGAACGGCCAGTACGCGGCTGCCCGCCTCCTTGTCCACGCTGGTGCTAA
CGTTTGCCTGCCGGACGCCCGGGGTATGACGCCGCTTCGACTGACGGTCG
AGATGGCCGACGCTGCTACCTTGGCCCTCCTGCTTTCTGCCGAAAGGCGT
GCGGATCTGAGCATCGAAGACGAGAATCAAGGAACGGTTCTCCACGCCGC
CTGCAGGCTCGGCTTAACAGATATTGCGCAGCTTCTTCTTGAATCCGGTG
CAAACCCACACGCGAGGGACGCACATGGACAAACGCCCGAGCTCGTGGCT
CTTGACCTGGGACACGACGAGTGTGCAGGACTCTTCTGCCAGCTGGAAGT
TGGTCTTTTTGTACTACAGAGCGAGAAGAGCGAGAGCGTGCCGGCCACAA
GCGCCGGCGAAGAGTCGTCCGAAGCGATGCTACTCGGAGAGCGCCACGGT
AGCGGCGACACGGACGTGGGGAGGGAAGACGCGCCGGGCGTGGAGGTAGG
GAAGCGGGATGATGAAGTCAACAACGCCAGAGAAGAAGGTGGCCTAGTGG
TCGAGCCGGAACGCTCAGGCGGTGAGGAAGAGCAGCAATATGGGAGGCTG
GAACCGGAGGACGGGGCGGAATGGACACTGGACACCTACCGAGAACATGG
AGAAGAGAAAATCGCAAAAGAACACTTTCCCGAGGCTGTTGATGGGGCAC
CTCTGCTATCTTCCGGCGTCCTCCCAGCCGACCACCAACAAGTGTTGACG
ATGTCTTCGGTGGGTGGGGGAGATGAAACCGAATGGAATCCGAACCAGCT
TATTGACGGACCCGACACCCACTCAAGAGGGAGCGTGGACCAGACAGAGA
CGCAGGAAAATCAAGGAACGGTTCTCCACGCCGCCTGCAGGCTCGGCTTA
ACAGATATTGCGCAGCTTCTTCTTGAATCCGGTGCAAACCCACACGCGAG
GGACGCACATGGACAAACGCCCGAGCTCGTGGCTCTTGACCTGGGACACG
ACGAGTGTGCAGGACTCTTCTGCCAGCTGGAAGTTGGTCTTTTTGTACTA
CAGAGCGAGAAGAGCGAGAGCGTGCCGGCCACAAGCGCCGGCGAAGAGTC
GTCCGAAGCGATGCTACTCGGAGAGCGCCACGGTAGCGGCGACACGGACG
TGGGGAGGGAAGACGCGCCGGGCGTGGAGGTAGGGAAGCGGGATGATGAA
GTCAACAACGCCAGAGAAGAAGGTGGCCTAGTGGTCGAGCCGGAACGCTC
AGGCGGTGAGGAAGAGCAGCAATATGGGAGGCTGGAACCGGAGGACGGGG
CGGAATGGACACTGGACACCTACCGAGAACATGGAGAAGAGAAAATCGCA
AAAGAACACTTTCCCGAGGCTGTTGATGGGGCACCTCTGCTATCTTCCGG
CGTCCTCCCAGCCGACCACCAACAAGTGTTGACGATGTCTTCGGTGGGTG
GGGGAGATGAAACCGAATGGAATCCGAACCAGCTTATTGACGGACCCGAC
ACCCACTCAAGAGGGAGCGTGGACCAGACAGAGACGCAGGAAGGCGGCGA
GTGGGAATGGTCGTCAACCGAGGGGTGGAAGGGACACCCCGGTGTAAGTG
AGCCTTCGCAAGCCATTGTGGTAATTGAGGGACGGGAGCCGCCACCCCCT
GCCGAGCCCGCGACTGCAGAGAATGGCGTAGACCACGACCTGCGTGATAG
CGAATCATGCTCGGAGATGCAACTGTATAGCAACGAAAACGACGTCGGTG
AGAGCCTGATCGATGAAAGCACGCACGGATGGGTTCAGACACCGGACAGG
AAATGGGAAGCAGAACCGACAGCCGAAGAAGGAGGAGGGATTTGCGACGA
CGACCCGGGAGGAAGGGGTCCCGAAAATCCAGCCGATGCAGGCAGCGGGA
TTGTCACGTACACTCCGGAAAGCTACGAGCACGAGCAGGGTGGGGAGAGC
GGCGGAGTCGATCGCCGAGGGCGGCGAGTGGGAATGGTCGTCAACCGAGG
GGTGGAAGGGACACCCCGGTGTAAGTGAGCCTTCGCAAGCCATTGTGGTA
ATTGAGGGACGGGAGCCGCCACCCCCTGCCGAGCCCGCGACTGCAGAGAA
TGGCGTAGACCACGACCTGCGTGATAGCGAATCATGCTCGGAGATGCAAC
TGTATAGCAACGAAAACGACGTCGGTGAGAGCCTGATCGATGAAAGCACG
CACGGATGGGTTCAGACACCGGACAGGAAATGGGAAGCAGAACCGACAGC
CGAAGAAGGAGGAGGGATTTGCGACGACGACCCGGGAGGAAGGGGTCCCG
AAAATCCAGCCGATGCAGGCAGCGGGATTGTCACGTACACTCCGGAAAGC
TACGAGCACGAGCAGGGTGGGGAGAGCGGCGGAGTCGATCGCCGAGAAGG
AAACGCACAGGAAACCCCTGCCGAAGTGTGGCGGGGAGGACGCGGGAACG
ACGATGCACATCAATCGGAGCACGACGAATACAACGACAACAAGGGCAGT
GAAGAGGGAGAGCAAAGCACGGCGCTAGATGCGGAGCCGGTGCTCCACAA
TGGGTTGGATGGGGACGAGGAGATGAGCAGGAGGGGTACGATGGGATGGA
GCGGCATCGCGGCTACCTTGCGAGCAAAACATTCCTGGATGTCCATCGTG
GACAGGGAGTCAGGCAGTGTGTACTATCAGAATCAGAGGTCTGGAGCGAC
ACAGTGGGAGCCGCCGGCTGAAGATGGGGCTGTCGTTGTGCCCGAAAAGG
AAACGCACAGGAAACCCCTGCCGAAGTGTGGCGGGGAGGACGCGGGAACG
ACGATGCACATCAATCGGAGCACGACGAATACAACGACAACAAGGGCAGT
GAAGAGGGAGAGCAAAGCACGGCGCTAGATGCGGAGCCGGTGCTCCACAA
TGGGTTGGATGGGGACGAGGAGATGAGCAGGAGGGGTACGATGGGATGGA
GCGGCATCGCGGCTACCTTGCGAGCAAAACATTCCTGGATGTCCATCGTG
GACAGGGAGTCAGGCAGTGTGTACTATCAGAATCAGAGGTCTGGAGCGAC
ACAGTGGGAGCCGCCGGCTGAAGATGGGGCTGTCGTTGTGCCCGAA back to top
|