mRNA_S-dermatodea_contig9949.17873.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9949.17873.1
Unique NamemRNA_S-dermatodea_contig9949.17873.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A6H5L4I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I6_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.070e-38
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 3 
Query:    3 PPPAPHPRLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLRTLI 317
            PPPAPHPR YDH+PFWRSNLA C +VM+GLG+VD  LRT+GVW++ G +  +R+ SYKRGVVYYMR DKVAGILLLNLSDQLE AREVLR Q +I+T   L  LI
Sbjct: 1012 PPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDSSLRTMGVWLDCGEN--NRKASYKRGVVYYMRDDKVAGILLLNLSDQLEAAREVLRQQQRISTAAQLERLI 1114
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A836C7T6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.470e-27
Identity = 59/105 (56.19%), Postives = 74/105 (70.48%), Query Frame = 3 
Query:    3 PPPAPHPRLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSG---GDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLR 308
            PPP P P  Y H P  RS L+G ++ M+GLGE+D RLRTVG+W++        A+ +P Y+RG+VYY+RGDKV GILL N +D LERAREVLR QPKI +I   R
Sbjct:  666 PPPGPFPCTYTHQPMLRSTLSGVEVCMEGLGEIDARLRTVGLWLDKNKTPARHAAGDPVYRRGLVYYLRGDKVVGILLWNTTDLLERAREVLRTQPKITSIAQCR 770
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: D7G9D2_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 6.820e-25
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 3 
Query:    3 PPPAPHPRLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDK 209
            PPPAPHPR YDH+PFWRSNLA C +VM+GLG+VDP LRT+GVW++ G D  +R+ SY+RGVVYYMR DK
Sbjct:  681 PPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGED--NRKASYRRGVVYYMRDDK 747
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A836CMS1_9STRA (Putative apoptosis-inducing factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.020e-21
Identity = 42/112 (37.50%), Postives = 74/112 (66.07%), Query Frame = 3 
Query:   18 HPRLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLRTLIKLGATGLIRLVD 353
            HPRLY H P +RS+    DI+++G+GE+D  +RTVG+W++ G +   +   + RG+VYY++G ++ G+L+ N SD  ++ R+V+  QP+IA I+ L+ L+ L     +  ++
Sbjct:  491 HPRLYMHQPTFRSHWEDLDILVEGVGELDASVRTVGIWVHGGAEGGKKASQFSRGLVYYLKGPQITGVLMWNASDLRDKVRDVMAAQPRIARIDDLKALVALAPNDWLHTIE 602
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: W7U6U0_9STRA (Apoptosis inducing factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6U0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.660e-20
Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 3 
Query:   24 RLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLRTLIKLGATGLIRLVD 353
            R Y H P +RS L   D+V D +GE+D ++ TVG+W+N+  +      +Y+RG++YYMR +++ GI+L N SD LERAREVL  Q  IA +  L+  I L     +R+++
Sbjct:  504 RRYTHQPMYRSLLKDIDVVCDVVGEIDSKMHTVGIWVNNPVETEDETETYQRGIIYYMRENRIRGIMLWNASDYLERAREVLNAQTNIANVAMLKRQIALAPDAWLRVME 613
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A4D9D2E6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.720e-20
Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 3 
Query:   24 RLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLRTLIKLGATGLIRLVD 353
            R Y H P +RS L   D+V D +GE+D ++ TVG+W+N+  +      +Y+RG++YYMR +++ GI+L N SD LERAREVL  Q  IA +  L+  I L     +R+++
Sbjct:  568 RRYTHQPMYRSLLKDIDVVCDVVGEIDSKMHTVGIWVNNPVETEDETETYQRGIIYYMRENRIRGIMLWNASDYLERAREVLNAQTNIANVAMLKRQIALAPDAWLRVME 677
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A662YDM8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDM8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.260e-19
Identity = 49/114 (42.98%), Postives = 77/114 (67.54%), Query Frame = 3 
Query:   24 RLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNS-GGDWAS--REPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIA--TINHLRTLIKLGATGLIRLV 350
            + Y H P +RS+L G  ++++G+GEVD  LRTVGVW+   GG+ AS  +  +++RGVVYY++G+K+ GILL N SD LE AR+++  +P+I    +  L+  I L  +  +R+V
Sbjct:  111 KTYRHQPLFRSHLPGVGVLIEGIGEVDSSLRTVGVWVQPPGGNGASGGQGMAHERGVVYYLKGNKIMGILLWNASDVLESARQLMLSRPEIRDNVVEELKHTISLAPSDWLRVV 224
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A6G0XS97_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XS97_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.730e-19
Identity = 44/110 (40.00%), Postives = 71/110 (64.55%), Query Frame = 3 
Query:   24 RLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIATINHLRTLIKLGATGLIRLVD 353
            ++Y H P + SN+AG  +V DG+GE+D RL+TVGVW+++       +  Y RG+VYY+RG K+ GILL N  D +E AR+V+  +P + ++  +  +I LG    + +V+
Sbjct:  397 KVYRHQPMFHSNMAGLGVVCDGVGEIDGRLQTVGVWLST------PDSPYARGIVYYLRGHKLVGILLWNAPDLVETARQVMVGKPTVDSVQDIPKVISLGPEAWLHVVE 500
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: A0A8K1C9S9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9S9_PYTOL)

HSP 1 Score: 92.0 bits (227), Expect = 2.960e-18
Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:   18 HPRLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNSGGDWASRE-PSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIA--TINHLRTLIKLGATGLIRLVD 353
            H +LY H P +RS+L G D+ ++G+GE+D    TVGVW+       S + P+Y+RGVVYY++G+K+ GILL N  D +E AR+ +  +P++    I+ L+  I LG    + +V 
Sbjct:  440 HLKLYRHQPVFRSDLKGIDVQIEGIGEIDASFHTVGVWVQPTASKESPQTPAYERGVVYYLKGNKIMGILLWNAPDVMESARQFMLTRPEVHENVIDELKEAISLGPDDWLHVVS 554
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BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Match: M4BZX1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZX1_HYAAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.100e-18
Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 3 
Query:   24 RLYDHLPFWRSNLAGCDIVMDGLGEVDPRLRTVGVWMNS----GGDW-ASREPSYKRGVVYYMRGDKVAGILLLNLSDQLERAREVLRVQPKIA--TINHLRTLIKLGATGLIRLVD 353
            ++Y H P +RS+L G  ++M+G+GEVD  LRTVGVW+      G D   +R+ SY+RGVVYY++G+K+ GILL N SD LE AR+++  +P+I    +  L+  I L     + +V 
Sbjct:  452 KVYRHQPLFRSHLPGVGVLMEGIGEVDSSLRTVGVWVRPLSSLGTDVDGARDLSYERGVVYYLKGNKIMGILLWNASDVLESARQLMLSRPEIRDNVVEELKHTISLAPNEWLHVVS 568
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9949.17873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4I6_9PHAE2.070e-3870.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7T6_9STRA1.470e-2756.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G9D2_ECTSI6.820e-2571.01Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A836CMS1_9STRA1.020e-2137.50Putative apoptosis-inducing factor 1 n=1 Tax=Tribo... [more]
W7U6U0_9STRA1.660e-2041.82Apoptosis inducing factor n=1 Tax=Nannochloropsis ... [more]
A0A4D9D2E6_9STRA1.720e-2041.82Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A662YDM8_9STRA4.260e-1942.98Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A6G0XS97_9STRA5.730e-1940.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1C9S9_PYTOL2.960e-1840.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BZX1_HYAAE4.100e-1842.74Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9949contigS-dermatodea_contig9949:209..5950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score74.7
Seed ortholog evalue2.8e-11
Seed eggNOG ortholog272952.HpaP812146
Preferred nameAIFM1
KEGG rclassRC00176
KEGG koko:K04727,ko:K17877
KEGG ReactionR00787,R00789
KEGG Pathwayko00910,ko01120,ko04210,ko04214,ko04217,map00910,map01120,map04210,map04214,map04217
KEGG ModuleM00531
GOsGO:0000166,GO:0000302,GO:0000737,GO:0001101,GO:0002931,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004174,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005758,GO:0005829,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006259,GO:0006308,GO:0006309,GO:0006323,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006921,GO:0006950,GO:0006952,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007584,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009055,GO:0009056,GO:0009057,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009893,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010257,GO:0010604,GO:0010623,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0014070,GO:0015980,GO:0016020,GO:0016043,GO:0016174,GO:0016310,GO:0016491,GO:0016645,GO:0016649,GO:0016651,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0019866,GO:0019867,GO:0019899,GO:0022008,GO:0022411,GO:0022607,GO:0022900,GO:0022904,GO:0023052,GO:0030154,GO:0030162,GO:0030182,GO:0030261,GO:0030262,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032355,GO:0032368,GO:0032370,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0032981,GO:0033108,GO:0033554,GO:0033993,GO:0034599,GO:0034614,GO:0034622,GO:0034641,GO:0034655,GO:0034976,GO:0035556,GO:0035690,GO:0036094,GO:0036293,GO:0036294,GO:0042221,GO:0042391,GO:0042493,GO:0042542,GO:0042592,GO:0042773,GO:0042775,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043270,GO:0043280,GO:0043281,GO:0043523,GO:0043525,GO:0043933,GO:0044070,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045862,GO:0046034,GO:0046483,GO:0046677,GO:0046700,GO:0048037,GO:0048468,GO:0048471,GO:0048518,GO:0048522,GO:0048545,GO:0048583,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050660,GO:0050662,GO:0050664,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050832,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0051385,GO:0051402,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0051900,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061024,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070059,GO:0070301,GO:0070482,GO:0070887,GO:0070997,GO:0071103,GO:0071236,GO:0071241,GO:0071310,GO:0071383,GO:0071384,GO:0071389,GO:0071392,GO:0071396,GO:0071407,GO:0071453,GO:0071495,GO:0071496,GO:0071704,GO:0071731,GO:0071732,GO:0071840,GO:0071949,GO:0072521,GO:0080090,GO:0080134,GO:0090304,GO:0090305,GO:0090649,GO:0090650,GO:0097035,GO:0097159,GO:0097190,GO:0097193,GO:0097194,GO:0097237,GO:0097305,GO:0097306,GO:0097366,GO:0098542,GO:0098588,GO:0098805,GO:0110096,GO:1900117,GO:1900119,GO:1900161,GO:1900163,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902065,GO:1902170,GO:1902510,GO:1902882,GO:1903624,GO:1903729,GO:1903793,GO:1904044,GO:1904045,GO:1905780,GO:1905782,GO:1905952,GO:1905954,GO:2000116,GO:2001056,GO:2001138,GO:2001140
EggNOG free text desc.Apoptosis-inducing factor, mitochondrion-associated, C-term
EggNOG OGs3QA5E@4776,COG0446@1,KOG1346@2759
EC1.7.1.4
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Ec32 orthologEc-28_001070.1
Exons3
Model size584
Cds size306
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9949.17873.1prot_S-dermatodea_contig9949.17873.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9949 289..5752 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925439.0460997-UTR-S-dermatodea_contig9949:208..2881622925439.0460997-UTR-S-dermatodea_contig9949:208..288Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9949 209..288 +
1694079934.2266421-UTR-S-dermatodea_contig9949:208..2881694079934.2266421-UTR-S-dermatodea_contig9949:208..288Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9949 209..288 +
1622925439.0971124-UTR-S-dermatodea_contig9949:5752..59501622925439.0971124-UTR-S-dermatodea_contig9949:5752..5950Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9949 5753..5950 +
1694079934.2849832-UTR-S-dermatodea_contig9949:5752..59501694079934.2849832-UTR-S-dermatodea_contig9949:5752..5950Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9949 5753..5950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925439.0630374-CDS-S-dermatodea_contig9949:288..3171622925439.0630374-CDS-S-dermatodea_contig9949:288..317Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 289..317 +
1694079934.2469323-CDS-S-dermatodea_contig9949:288..3171694079934.2469323-CDS-S-dermatodea_contig9949:288..317Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 289..317 +
1622925439.0735369-CDS-S-dermatodea_contig9949:2866..29661622925439.0735369-CDS-S-dermatodea_contig9949:2866..2966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 2867..2966 +
1694079934.264447-CDS-S-dermatodea_contig9949:2866..29661694079934.264447-CDS-S-dermatodea_contig9949:2866..2966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 2867..2966 +
1622925439.0857325-CDS-S-dermatodea_contig9949:5575..57521622925439.0857325-CDS-S-dermatodea_contig9949:5575..5752Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 5576..5752 +
1694079934.2748222-CDS-S-dermatodea_contig9949:5575..57521694079934.2748222-CDS-S-dermatodea_contig9949:5575..5752Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9949 5576..5752 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9949.17873.1

>prot_S-dermatodea_contig9949.17873.1 ID=prot_S-dermatodea_contig9949.17873.1|Name=mRNA_S-dermatodea_contig9949.17873.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=102bp
MDGLGEVDPRLRTVGVWMNSGGDWASREPSYKRGVVYYMRGDKVAGILLL
NLSDQLERAREVLRVQPKIATINHLRTLIKLGATGLIRLVDAPGSLLTPS
L*
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mRNA from alignment at S-dermatodea_contig9949:209..5950+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9949.17873.1 ID=mRNA_S-dermatodea_contig9949.17873.1|Name=mRNA_S-dermatodea_contig9949.17873.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5742bp|location=Sequence derived from alignment at S-dermatodea_contig9949:209..5950+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCCGCCTCCTGCGCCACACCCACGCCTATACGATCACCTCCCCTTCTGG
CGTTCGAATCTGGCGGGCTGCGACATCGTCATGGACGGGCTTGGCGAAGT
AGATCCTAGGTGAGTTGAGTTTACGGGCAAACTAAACTTAATACTGTAAT
AATTAATATCGCTTTGTCCGGTTTTTAATATCATAGCAATTTCAGAGTGA
CCATACCCATACTATTTCCTGCATGTTTTGCGTAACATAAGTAATAGCGA
TTTTAAAGAGGGATGAATTGATGCCAACCAACTTGATTTTAGAGTACGCT
CGCTCCCGGCCTCAAAGAGTATTACAGTAGTAGGATTTTTCACTTTTCAC
TTCACGGGCGTAGCCAGCCGTGGCCACCTACTATACTGTATTATTATAAC
ACTAACACTAGTGGGTAGCCACGGCTACACCCGTGAGGTGTGCGAACCGG
CGAAATATCCGAACAGGCTTCAAAATACTACACTGTAGGCCCTATCGGTT
TGGCATCAGGGCTCCACTCTAAAATCCACATCGATTTGGCATAAAGGCTC
CACTCTAAAATATATATAAAAAACGTGCAAAGCGCTACGGTATTAATTAA
TTAACCCTGTTGGAGCTGGGTCCGTTTTAGCGGCGATTGTGGTCAGTAGT
TACTATGATAGTCACTATAATAGCCACTACAATAGTCACTTTATAATAAG
TAATAGGGCTATATCGCCGGCGACGGGCGCATCGCATATGGACGAGTGCA
AACCACCGTGCATGCAAGCCATACGTGGACGGCAGGGTTGTCAGCAATTT
TACGCCGCCACCATGGACGGTATGATACGGTGTATATATACAAGTATTAA
TAGTATACCGTAGTAGAGTTCTGATTAGTTATTTTTTCCTTCTTGACTCT
TTGCGCATCTGACCACAAGTCGGGTCGGATTATGCCGGTCGGCTATACGA
GCAAAGTCAATGAAGAAAAAAAAAACTACGGCAAGGAGTATGTGGTATAC
AGTACACAGTATAGTATAAAGTATATAGTAGCCACCGCTGTTCGGTCGCG
GTTCGATGTTAGATACAGTGTGGGCAGATTTGCCTAAACCCCGAATACAG
CCTCAGATCCAAAAGGGTTATATTGGAGAGCTCTGATAAAGATTCATGCT
GTCTGGACTGAGTCAACATTGACACCGAATATCGCCAACTACGGGTATGT
TTGATAAGAGATGCATGTCTGCATTTTGTCTAGAGTACAGTACAGTACAG
TACAGTACGGAGGGAGGTACATAGCAATCAGGACAAAATTTGTGCTCAAT
ACGATCGTATTCAAGTCTTGTATTCAAACATTGGCCTGACTTTCTTGTAA
GACAAAAAACGTGTTTTTGTGAATTTCTGGCCAGAATATTTGCAGATGGT
GTAAAAAAGGCCATACCATATTAAAAATGGTATACTGTGTTAGGTATGAT
ACTGTACCGTTTGGCATATTTTGTCCTGATTACTGACTGTGTACCTCCGT
AATTGGTGCAAATTTACCTTTTTCCCCATGTATTTTTGGGGCGAGCGGTC
TCCTTTGTGCAAATTTTACCTTTTTCCCCTCATAGTTTTTGGGTTTTGCC
GTCTCCTTCTCGCCCTTGATGATGCTCTTCACGCTCGCTCTGCCCAACTG
GTCATAAGTCCATACCAGAGGCTTGCTCTCCGCGGTGCAGAGGACGATTT
TTCCGCATGGGCAATCGATAACTTCACCCGGGCGAACAAGTATTGTACAA
GTATCAGTATTGAACCATTTTGGAACTGACTTAGTGTTTCGGGTCCACCC
ACCTGCACCGTCCGTATTTCACATCGAACAGGTACAGTACCCGAACGGTG
GCTTCTACATACTATACACTATATAATAGTATAATTAGTATACTAGTATT
TTCACATCGAACAGGTACAGTACCCGAACGGTGACTAGTATATACTATGA
TGTACACTATATACTATTATATCCTAGTATTTCACATCGAACAGGTACAG
TACCCGAACTGTGGCTTACTTCTCGCCCTACATATTTTACGGGGGTAGAC
AGTAGTCAGGACCAAATGGGCCAAACAGTAGATATACCCCGACAATGATA
TACCATAAAGCTACCTGGTCTGGCTTTACAACATGTGGAATCTTGTGCCG
GCCTTGAATGAGAAATAAAAAACTACAACTTTTCTTGCAATTTTTTCGGG
CCAACGTTTATAAACAATACCTATTATAATTTTGCCTTGGTTACTGTGTA
CCTCCGCGATATATATTTTTTCACAAAGTGCTTTGGCCAGCGTTTAAAAA
GAAGACTCGGATATGCTATTGAGCAGAAATTTGGTCTTGAATATTGTGTA
CCTTCGTTACAGTAGTGGCGGTGCAAAAGTGATACTAATATTAATAGTAC
AATTTGCCACGCTTACTGTATCATAGCTTGCATGGATGCACGTGGCGTAG
TTGCGCGTGCACCCTCACTCACACGATCATGATCACCACATTGTACCCGC
AGTGGCGACATTCCACGCAAAACCGATTCAGTGCCCAAGGGGTCAGAGCT
CTGATACCAGAAGGCAGGCTAGGCTGGCTTCCGTTCGTCGCTCACACAGT
TTTCTTTTTCTTTTTCCCACCGCCCCCTTTGGCGTGGTCGGGCACGCATG
TGCGGCAGATTGCGCACGGTAGGCGTGTGGATGAACAGCGGGGGGGACTG
GGCCTCTCGGGAACCAAGCTACAAGCGAGGCGTCGTGTACTACATGCGCG
GCGATAAGGTGACTACAGTAGTAAAAAACGCTAAATAGCGACAACCCACT
GTACCTGTGATGTACCAGCATGTTTTATGTGGCATGACAAGGGCAGAGGC
GGGCTTTCTGGAGAGATGTGGTAAAGCAGTAGAGCTCTACTTTAATATAA
CGGAGGTAAACAATGCTAATGCTGGTATTAATTGTAATCAGGACCAATTT
TTTGCTAAAGTGCTACAGTATTCGTGTATTGTTTTTTTACACGTTGGCCC
GAACACCTTGTGATATATATACTACTTCGAAGTAGTATATAATACTTGTA
TATATATTTATTTTTGTTTGACATTTCAGGCCGGAAGATTGATTGCACAT
GATATTGTAGCGCTAAGGCCAGACACAGACCAGATTCGTTTCTGGTTATT
ATAGTACTATACTTTTGGGAAAGACATTAGGTCCTGATTACTATTATACA
GTAGTAATATAGCTCTAGCTGTGTACCTCCATAATATGATATTCATGGAG
CAAAATGCCCTGATTGCATATTTTCATATTTCTTACGTAACCTTTTATGC
CCTGAGTCCATTTGTTTAGGTGCTGTGATATGTCGCCCTGCACAGCAATT
CGCGTCGAACAGCTATAAGTACCCCACCGCGGCTACACGTGTTTGAAACC
AAATAAATAGATTTTTATACCATGTACCTGGTATTTATTATGGCACACAC
ATGACAGACCGGCTTTTCCGTGGTCCGTCTGTTGTCGCGAGGGGGTCATC
ACATCTCTCTTACCCCCGGTTCTTACCTTAGTATTTTTTAGCGCGAATGC
ATTGGGTTCGTTCGGCACTCCCGCAGCTCACCAATTCTAGGATTAAGTAT
GTACTATTAATAGTAGGTACACAGTAGCATATTATTAATAGCTTGTTTTT
TGAACCTTGGCCCGAACACCTTTTGTAATAACAATATTGTTTTGGTTGGC
ATTTCAGGCCGGAAGATGGCAGAGGTTGTATACTATTAGTAGTATAGTAT
AGTATAGTATAGTATATGATATGATAAGGCCCGATCAGATTCATGTATGG
TGTATGTACTGCTGTATGGAGCTGTGTCTTTTCAATGAACACACATGACA
CAGAGAGTGTACAATCCATACAGTACAGTAACTCATCGGGACAGGACAGG
ACCCGGGTGTGCTTTGTTGTAAACAAAACTGATACAATTAATAGTATGAT
TTCACGGCCACCCGAAAGAAAATCTCCTTGCAATAGAACATGGTCCAGGC
GACTCCCCAAGTGCAATACTTGGCTCAGCACAACGTGCCCCGGCGAACGG
CCTTCTGCGCGCGTGCTATGATACCACATTGTCTCCGAGGAAACACGTAG
ATTATGTTGGTTCTGACACATTTGGTCCTGATTTCTGTGTACAGTACCTC
CCTAAAAATGGTACTGTACCAGGTATAAACTTGTGCAATGTTGTAAAGCC
GCCCCCCCCCCCCAAAAAGTACAATGACTTCGAAAACATAGACCGAGCGT
TGGGGTACTGTCCCACCGTTTCAAAAGGGGATATGGTTCAAGCTGTTAAA
CACTCCTATGGAGGCTCAATTGTTGCGTACGATGCGATTATAATGGTTTC
ATGCAGCACTTCAGACAGTAAGTTTCTGTAGCATGGCATTACCTACCAAT
TGCATGATAGGGTAGAGTGATGACAGGCAGCACGTGGGACATAAATCCTG
TAGATCGTGCTATTAATATATTAATAGTATCATATTAATAGCACATTATT
ATTATAGTTTCCTGTACAGTATACAGTATACAGTATACAGTATACAGTAT
ACAGTAGCAGGGGGTCAGGCGCTCCGCCGAGCAGCGTGCGGGTTATATCT
CTGTCATGTCTGGACATCAGTTTTTTGTTTGTTGTAGGGGTGCTGGATTT
CAATTGCTTTTGTGCCTTAAAGTGGCCANNNNNNNNNNCATCCACTTTTG
CAATTGCAAAAATGGCGGGCCGGTCGGTTGCATGTGTGAGAATCAATCAA
TCAATCAATCAGTTGTTTCATGTACTGTATGATGTGATATGGGTATGGTA
CAAGTGTCTTTGTTCTGAGCGATATCCTGGTAGTATATATTTTATGTGCT
TTACCCCCCCCCCACATCCTATAGTTCACCTGTTGAACATTGGACTGTCG
GAACGCTCTAGAGAAACCATCGGCTTATGAATGGTACTCCGCCAGGAATG
CTCATGAGCAGATTATAGTCCGACTGTAGCACACATGTACCGTCGTGTAT
ATGTATATTGTATATTGTATATTGTGTGCGTGCGGCGCTTTTGCGTTCGC
ACGGAGATCAAAGTCTCTTTAATCCCTTTGCGGTCCTCGGGAGTATATTC
ACGCCTACTGAATGTGCAACATTTGTTTACCCGGTATCTCCAATCAACCC
ATGGCATATTGTTTGGCGCCGCAAACCCAAGGGTGATGACCAGCAGCTGT
TAATAGTATTATATCATCCTTGTGAAACGCAGCCTGGCCGGCGAAAACCC
GGCTTATCGCTCCGTTCCGGCATTGTTGGGATATGACATACAGTACGTGG
TCTATGTCCGTCTGAATACGACATGCGTTTAACATAGGTACACCCCCCCC
GCCCCTGCAACTCCCAGGTGGCCGGCATTCTACTTCTTAACCTATCCGAT
CAGCTCGAGAGGGCCCGCGAGGTGCTGCGCGTACAGCCGAAGATAGCCAC
CATAAACCACCTCAGAACGCTCATAAAGCTTGGAGCGACCGGGCTGATAC
GCCTGGTGGACGCCCCTGGTTCACTCCTAACGCCGTCTTTGTGAGGGCAA
CCCGAAACCAACCGCTGTGTGTCGCGCGCGCGGAAGAAAGGAAGGAAAGA
ACAATCTGTATCTGCTATGTAGACGTTTAGGGGCTGTTAAGGCGAGCCTC
GCCGGCGTTTGATGGGGGCTCGCTCCTGCCGGGCCTGTCTGCAAGTGTTC
TGTTAGGACTGGCCACCGCTACTAGTAGCATATGTAGCGGCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9949:209..5950+

>mRNA_S-dermatodea_contig9949.17873.1 ID=mRNA_S-dermatodea_contig9949.17873.1|Name=mRNA_S-dermatodea_contig9949.17873.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at S-dermatodea_contig9949:209..5950+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGGGCTTGGCGAAGTAGATCCTAGATGGACGGGCTTGGCGAAGTA
GATCCTAGATTGCGCACGGTAGGCGTGTGGATGAACAGCGGGGGGGACTG
GGCCTCTCGGGAACCAAGCTACAAGCGAGGCGTCGTGTACTACATGCGCG
GCGATAAGATTGCGCACGGTAGGCGTGTGGATGAACAGCGGGGGGGACTG
GGCCTCTCGGGAACCAAGCTACAAGCGAGGCGTCGTGTACTACATGCGCG
GCGATAAGGTGGCCGGCATTCTACTTCTTAACCTATCCGATCAGCTCGAG
AGGGCCCGCGAGGTGCTGCGCGTACAGCCGAAGATAGCCACCATAAACCA
CCTCAGAACGCTCATAAAGCTTGGAGCGACCGGGCTGATACGCCTGGTGG
ACGCCCCTGGTTCACTCCTAACGCCGTCTTTGTGAGTGGCCGGCATTCTA
CTTCTTAACCTATCCGATCAGCTCGAGAGGGCCCGCGAGGTGCTGCGCGT
ACAGCCGAAGATAGCCACCATAAACCACCTCAGAACGCTCATAAAGCTTG
GAGCGACCGGGCTGATACGCCTGGTGGACGCCCCTGGTTCACTCCTAACG
CCGTCTTTGTGA
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