mRNA_S-dermatodea_contig9879.17836.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.220e-47 Identity = 78/98 (79.59%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNALKYATAMSVSLFGTFQPQ SW+WVFCFVFATLYQF+WD++MDWDLLR DG+S+RLRPRLLYR+K +Y VA++NL LRFLWTVTL+P
Sbjct: 624 RWPHLGNALKYATAMSVSLFGTFQPQMKSSWVWVFCFVFATLYQFSWDVVMDWDLLRW-DGKSLRLRPRLLYRNKTLYTSVAVVNLLLRFLWTVTLVP 720
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI) HSP 1 Score: 156 bits (395), Expect = 2.640e-42 Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNALKYATAMSVSLFGTFQPQ SW+WVFCFVFATLYQF+WD++MDWDLLRCRDG+S+ L P L+Y +K +Y VA+ NL F TVTL+P
Sbjct: 719 RWPHLGNALKYATAMSVSLFGTFQPQMKSSWVWVFCFVFATLYQFSWDVVMDWDLLRCRDGKSLPLGPPLVYPNKNLYTNVAVGNLLPSFPGTVTLVP 816
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S2WTB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTB0_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.980e-33 Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRC--RDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNALKYATA +V+L+G F + +W+F FVFATLYQF WDI MDWDL+R R GR V R LLY+SK Y+ + +LNL LRF WT+TL+P
Sbjct: 15 RWPHLGNALKYATAQTVALYGLFHADARSNPLWIFGFVFATLYQFAWDIFMDWDLVRISQRMGR-VNFRDNLLYKSKSFYLCIMLLNLGLRFFWTLTLIP 113
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S2C320_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C320_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.970e-32 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNA+KYATA +V L+G F + +W+F FVFATLYQ+TWDI MDWDLLR ++GR R LLY++K Y+ + ++NL LRF W++TL+P
Sbjct: 494 RWPHLGNAMKYATAQTVGLYGLFHANARSNGLWIFGFVFATLYQYTWDIFMDWDLLRFKNGRPA-FRENLLYQNKSFYLAIMVVNLVLRFFWSLTLIP 590
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S2SPW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW5_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.990e-31 Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRC--RDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNALKYATA +V+L+G F + +W+F FVFATLYQF WDI MDWDL+R R GR V R LLY+SK Y+ + +LNL LRF WT+TL+P
Sbjct: 463 RWPHLGNALKYATAQTVALYGLFHADARSNPLWIFGFVFATLYQFAWDIFMDWDLVRISQRMGR-VNFRDNLLYKSKSFYLCIMLLNLGLRFFWTLTLIP 561
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S3YFX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFX7_HETAK) HSP 1 Score: 119 bits (299), Expect = 1.220e-30 Identity = 57/98 (58.16%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNA+KYA A +V L G F P+ WV FVFAT YQ+ WDI MDWDLLR +G S LR LY SK Y+ +A +NL LRFLWT+TL+P
Sbjct: 150 RWPHLGNAMKYAAAQTVGLLGVFHPELRQHPAWVSGFVFATCYQYAWDIFMDWDLLRW-NGSSFELRKNRLYSSKSFYLAIAAVNLVLRFLWTITLIP 246
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S2XUU5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU5_9STRA) HSP 1 Score: 120 bits (301), Expect = 9.480e-30 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHLGNA+KYA+A +V L G F+P + +W+ FVFAT+YQF WDI MDWDL RDG + +LR +LL+R K Y V +NL LRFLWT+TL+P
Sbjct: 374 RWPHLGNAMKYASAQTVILCGVFRPSLKTNPMWILAFVFATVYQFLWDIFMDWDLFVWRDG-AFQLRSKLLFRRKSFYYAVTGINLCLRFLWTITLIP 470
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S1V254_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V254_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.680e-25 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWP+LGNA KY A V++FG + P H +WIW+ CFV ATLYQ WD+ MDW+LL + LR + LY KG+Y + I+N LRF WT++ LP
Sbjct: 232 RWPYLGNATKYLVAAEVAMFGVWDPTKHTNWIWLSCFVGATLYQVWWDVFMDWELLG-----NTGLRKKRLYPYKGVYWTILIINFVLRFGWTLSFLP 324
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A7S0F4Z2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4Z2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.940e-19 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQPQ------------NHGSWIWVFCFVFATLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
RWPHL NA KYA + +V+LFG F P N W+F F+ ++LY FTWD+ MDW L R + L P L++ +G Y V L+L LRF+W +TLLP
Sbjct: 146 RWPHLANAFKYAFSQTVTLFGAFHPLYLEHTRKVEKGLNVFQLTWLFIFISSSLYSFTWDVYMDWGLGR---PKYKYLGPSLMFPKRGYYFMVIALDLVLRFMWVLTLLP 252
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Match: A0A067CPW5_SAPPC (EXS domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CPW5_SAPPC) HSP 1 Score: 79.3 bits (194), Expect = 3.450e-15 Identity = 48/106 (45.28%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 1 RWPHLGNALKYATAMSVSLFGTFQP---QNHGSW-IWVFCFVFA----TLYQFTWDIIMDWDLLRCRDGRSVRLRPRLLYRSKGMYVGVAILNLALRFLWTVTLLP 294
R+PHL NA+KYA A S+ LF F P Q W ++ C++ A T+YQF WDI MDW L D +S LR LLY YV + +L+ LRF WT+TL+P
Sbjct: 331 RFPHLPNAMKYACAQSIVLFAVFHPNLKQQDREWTVYQSCYMVAWVGTTMYQFIWDIYMDWGL---GDLKSGFLRQTLLYPKWAYYVAI-VLDFFLRFFWTLTLVP 432 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9879.17836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9879.17836.1 >prot_S-dermatodea_contig9879.17836.1 ID=prot_S-dermatodea_contig9879.17836.1|Name=mRNA_S-dermatodea_contig9879.17836.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=98bp RWPHLGNALKYATAMSVSLFGTFQPQNHGSWIWVFCFVFATLYQFTWDIIback to top mRNA from alignment at S-dermatodea_contig9879:201..1423+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9879.17836.1 ID=mRNA_S-dermatodea_contig9879.17836.1|Name=mRNA_S-dermatodea_contig9879.17836.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1223bp|location=Sequence derived from alignment at S-dermatodea_contig9879:201..1423+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9879:201..1423+ >mRNA_S-dermatodea_contig9879.17836.1 ID=mRNA_S-dermatodea_contig9879.17836.1|Name=mRNA_S-dermatodea_contig9879.17836.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at S-dermatodea_contig9879:201..1423+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |