mRNA_S-dermatodea_contig9861.17826.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9861.17826.1
Unique NamemRNA_S-dermatodea_contig9861.17826.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: D7G419_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G419_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 3.830e-172
Identity = 220/260 (84.62%), Postives = 244/260 (93.85%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            +GNKQL+RHW+ WV E DIAQ+ATVG+NT+RLPVGDWMYQPYGPYVGCTDGAL+EVDRLF+LCRR+GIRVLLDIHA+A SQNGFDNSGQAMDIEWTTYSGN VSGTATFVHWPYRAARW+GD++R  G+Y +KNE+AI  TL VIQTMVD+YANETAVMGLQP+NEPWQFTPI+WLKDFYWDGYHIVREQAPHWLFLMHDSFNFDV TWGDFMKNCPTIGLDTHIYQAW+ PGPQAGYLA+ACDAK  I+AME+ GMPV+
Sbjct:  123 EGNKQLKRHWQTWVTEEDIAQLATVGVNTIRLPVGDWMYQPYGPYVGCTDGALEEVDRLFDLCRRYGIRVLLDIHAIANSQNGFDNSGQAMDIEWTTYSGNAVSGTATFVHWPYRAARWMGDWDRAAGEYTSKNESAIEFTLKVIQTMVDLYANETAVMGLQPVNEPWQFTPIDWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLASACDAKNNIMAMEERGMPVI 382
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A836CHB0_9STRA (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB0_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 7.030e-133
Identity = 173/260 (66.54%), Postives = 210/260 (80.77%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            +GN+QLR HW +WV E DIAQ+AT+GINT+RLPVGDWMY+PYGPYVGCTDGAL++V+RLF L   + I +LLDIHAV GSQNGFDNSG+++++EWTT+S   V+G ATFVHWPYR+A W+G F+ +T  Y  KNE  + HTL VI+ MVDMY    +V+G++P+NEPWQFTP++WLK+FYW+GY IVRE  P WLFLMHD+F FDV  WGDFM NCP IGLDTHIY AW  P PQA YL+ ACD K  +VAMEK GMPVV
Sbjct:  144 EGNRQLRAHWDSWVTETDIAQLATMGINTIRLPVGDWMYKPYGPYVGCTDGALEQVERLFWLAHHYNIGILLDIHAVQGSQNGFDNSGRSLNLEWTTFSSTKVAGAATFVHWPYRSANWMGTFDPHTATYVDKNEAHLQHTLDVIRIMVDMYKFVPSVIGIEPVNEPWQFTPVKWLKEFYWEGYQIVRETVPQWLFLMHDAFMFDVNIWGDFMLNCPNIGLDTHIYHAWLDPMPQASYLSYACDVKNALVAMEKKGMPVV 403
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A7S2R252_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R252_9STRA)

HSP 1 Score: 324 bits (831), Expect = 7.730e-107
Identity = 148/264 (56.06%), Postives = 182/264 (68.94%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVG-INTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEK-MGMPVVGE 792
            +GNKQLRRHW  WV E  I  +A+ G +N++RLPVGDWMY+PYGPY+GCTDGALD VD L +     GI VL+DIH V GSQNGFDNSGQ   +EWT+      +G  TF HWP R+A W+GDF+R T  Y   N   I H L  IQ +VD Y N  AV+GL+P+NEPWQFTP++ LK FYW+GY IV+  AP+W +++HDSF FD  TWG FM+ CP   LDTHIYQAW  P  +  +  +AC  K+ IV MEK  G  +VGE
Sbjct:  105 EGNKQLRRHWDTWVTEDIIESLASSGAVNSLRLPVGDWMYKPYGPYIGCTDGALDYVDYLLDWAHSRGISVLIDIHGVKGSQNGFDNSGQCQGMEWTSQLNTEPAGLVTFEHWPIRSANWMGDFDRETTSYTNINYKQIQHALDTIQVIVDKYKNHPAVLGLEPVNEPWQFTPLKELKKFYWEGYLIVKNLAPYWKYIIHDSFRFDPETWGGFMRGCPDRALDTHIYQAWKNPAARTFFYEDACQQKQMIVTMEKAFGPIIVGE 368
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A0W8D2C2_PHYNI (Arabinan endo-1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D2C2_PHYNI)

HSP 1 Score: 323 bits (829), Expect = 7.550e-105
Identity = 137/260 (52.69%), Postives = 179/260 (68.85%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            + N+QLR HW  WV E D+ ++A  GIN+VR+PVGDWM+ PY PY+GCTDGA+ E+DR+ EL  ++ I VLLDIH + GSQNGFDNSG    ++WT+       GT TF HWP R+A W GDFN +T  Y++ N   + H+L  + T+V+ YA   A++GL+P+NEPW+ TPI+ LKD+YW  Y  V+ +APHW F++HDSF F V  W  FM+ CP I LDTHIYQAW  PG +A + ANAC  K  I  ME   MPV+
Sbjct:  131 EANRQLRIHWATWVTEDDMKELAETGINSVRIPVGDWMFNPYEPYIGCTDGAVKELDRVIELAYKYNIEVLLDIHGLIGSQNGFDNSGMTAGVKWTSIGSTQPVGTTTFEHWPLRSAGWAGDFNLSTNSYNSLNYENLNHSLHTVTTLVERYAEHPAIIGLEPVNEPWELTPIDMLKDYYWRSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWNNPGTKADFFANACQQKYTIADMENERMPVI 390
[Close]
BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: W2NFT1_PHYPR (X8 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2NFT1_PHYPR)

HSP 1 Score: 323 bits (829), Expect = 2.810e-103
Identity = 137/260 (52.69%), Postives = 179/260 (68.85%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            + N+QLR HW  WV E D+ ++A  GIN+VR+PVGDWM+ PY PY+GCTDGA+ E+DR+ EL  ++ I VLLDIH + GSQNGFDNSG    ++WT+       GT TF HWP R+A W GDFN +T  Y++ N   + H+L  + T+V+ YA   A++GL+P+NEPW+ TPI+ LKD+YW  Y  V+ +APHW F++HDSF F V  W  FM+ CP I LDTHIYQAW  PG +A + ANAC  K  I  ME   MPV+
Sbjct:  131 EANRQLRIHWATWVTEDDMKELAETGINSVRIPVGDWMFNPYEPYIGCTDGAVKELDRVIELAYKYNIEVLLDIHGLIGSQNGFDNSGMTAGVKWTSIGSTQPVGTTTFEHWPLRSAGWAGDFNLSTNSYNSLNYENLNHSLHTVTTLVERYAEHPAIIGLEPVNEPWELTPIDMLKDYYWRSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWNNPGTKADFFANACQQKYTIADMENERMPVI 390
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A225WK23_9STRA (Glucan 1,3-beta-glucosidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WK23_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.200e-102
Identity = 134/260 (51.54%), Postives = 181/260 (69.62%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            + N+QLR HW  WV EGDI +MA  G+N++R+PVGDWM+ PY PY+GCTDGA++E+DR+  L  ++ I +LLDIH + GSQNGFDNSG A  ++WT+ +     GT TF HWP R+A W G+F+  T  Y + N   + H+L  +  +V+ YAN  A++GL+P+NEPW+ TPI+ LKD+YW  Y  V+ +APHW F++HDSF F V  W  FM+ CP I LDTHIYQAW +PG ++ Y ANAC  K  +  ME   MPV+
Sbjct:  132 EANRQLRIHWATWVTEGDIKEMAEAGVNSLRVPVGDWMFNPYEPYIGCTDGAVNELDRVANLAHKYNIDLLLDIHGLVGSQNGFDNSGMASSVKWTSIASTRPIGTTTFEHWPLRSAGWAGEFDSTTNTYKSINYEHLNHSLSTVAAIVNRYANHPAIIGLEPVNEPWELTPIDLLKDYYWKSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWNSPGTKSDYFANACQQKYMVAEMENAMMPVI 391
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BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A225WPV7_9STRA (Exo-1,3-beta-glucanase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WPV7_9STRA)

HSP 1 Score: 318 bits (816), Expect = 2.060e-101
Identity = 133/260 (51.15%), Postives = 180/260 (69.23%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            + N+QLR HW  WV E D+ +MA  G+N++R+PVGDWM+ PY PY+GCTDGA+ E+DR+ +L  ++ I +LLDIH + GSQNGFDNSG +  I+WT+       GT TF HWP R+A W G+FN +T  Y++ N   + H+L  +  +V+ YA   A++GL+P+NEPW+ TPI++LKD+YW  Y  V+ +APHW F++HDSF F V  W  FM+ CP I LDTHIYQAW  PG +A + ANAC  K  I  ME   MPV+
Sbjct:  124 EANRQLRIHWATWVTEADMKEMAEAGVNSLRVPVGDWMFNPYEPYIGCTDGAVKELDRVADLAAQYNIELLLDIHGLIGSQNGFDNSGMSSGIKWTSIGSTQPVGTTTFEHWPLRSAGWAGEFNLSTNSYNSLNYEHLNHSLYTVTALVNRYAEHPAIIGLEPVNEPWELTPIDFLKDYYWRSYKRVKARAPHWKFVLHDSFRFGVQYWSKFMRGCPDIALDTHIYQAWNNPGTKADFFANACQQKYTIAKMENERMPVI 383
[Close]
BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A0M0J8Y9_9EUKA (Glucan-beta n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8Y9_9EUKA)

HSP 1 Score: 314 bits (805), Expect = 2.380e-101
Identity = 144/265 (54.34%), Postives = 184/265 (69.43%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSG-TATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEK-MGMP-VVGE 792
            +GNKQ+RRHW+AWV+E DIA +A  G N VR+PVGDW + PYGPY+GC DGA DE+ R+ +LC ++ I+ LLDIHAV GSQNGFDNSGQA+ ++WT  +     G   TF HWP R+A W G F  ++  Y + N+T I  TL V+QT+V M+ +  A+ GL+PLNEPWQ  P+E LK FYWDGYHIVRE AP W+F+MHDSF      W DFMK C    LD HIYQAW  PG  + +  NAC+ +  +  ME+ + MP +VGE
Sbjct:  108 EGNKQMRRHWQAWVREEDIASIAKTGSNMVRIPVGDWQFAPYGPYIGCMDGANDELKRVLDLCSKYKIKALLDIHAVRGSQNGFDNSGQALAVKWTQVTSQADDGGITTFEHWPIRSAEWAGKFELSSWSYSSINDTNINSTLAVVQTIVSMFKDHPAIWGLEPLNEPWQAIPLEVLKKFYWDGYHIVREGAPKWMFVMHDSFRGYPSAWWDFMKGCSHKVLDAHIYQAWNRPGLMSTFYKNACNFRGNVRQMEEQVDMPLIVGE 372
[Close]
BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A7S2WMK6_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMK6_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.190e-101
Identity = 142/260 (54.62%), Postives = 182/260 (70.00%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            +GNKQLRRHW  WV E  I ++A  GIN++RLPVGDWMY+PYGPYVGCTDGALD+VD L +   +  + VLLD+H V GSQNGFDNSGQ+  + WT+          TFVHWP R+A WIG F+ +TG Y + N   IA TL VI  +VD Y    +V+GL+P+NEPW+ TP++ LK+FYW+GY IV+ +AP W ++MHDSF F   +WG FM  CP I +DTHIYQAW  P  +  +  NAC+ K RI+ ME++  PVV
Sbjct:   62 EGNKQLRRHWDTWVTEAIIDELAAAGINSLRLPVGDWMYEPYGPYVGCTDGALDKVDWLLDQAAKHKLSVLLDLHGVIGSQNGFDNSGQSSSLVWTSILSTKPIQAVTFVHWPIRSAGWIGTFD-STGFYSSINREHIAMTLRVITAIVDRYHTHPSVLGLEPVNEPWELTPLDILKNFYWEGYLIVKRRAPAWKYIMHDSFRFTPESWGGFMAGCPDIAMDTHIYQAWNNPANKEAFFTNACEQKARIIEMERVFGPVV 320
[Close]
BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Match: A0A421F7K3_9STRA (X8 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F7K3_9STRA)

HSP 1 Score: 318 bits (815), Expect = 6.320e-101
Identity = 134/260 (51.54%), Postives = 179/260 (68.85%), Query Frame = 1 
Query:    7 QGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGCTDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTYSGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTMVDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKRIVAMEKMGMPVV 786
            + N+QLR HW  WV E DI +MA  G+N++R+PVGDWM+ PY PY+GCTDGA++E+DR+ +L  ++ I +LLDIH + GSQNGFDNSG +  ++WT+       GT TF HWP R+A W G+FN     Y++ N   + H+L+ +  +VD YAN  A++GL+P+NEPW+ TPI+ LKD+YW  Y  V+ +APHW F++HDSF F V  W  FM+ CP I LDTHIYQAW  PG  A + ANAC  K  I  ME   MPV+
Sbjct:  153 EANRQLRIHWATWVTEADIKEMAEAGVNSLRVPVGDWMFNPYEPYIGCTDGAVNELDRVTKLAHKYKIDLLLDIHGLIGSQNGFDNSGMSSSVKWTSIGSTKPVGTTTFEHWPLRSAGWAGEFNATNNLYNSINYEHLNHSLVTVAAIVDRYANNPAIIGLEPVNEPWELTPIDILKDYYWKSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWMNPGTSADFFANACQQKYVIADMENAMMPVI 412
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9861.17826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G419_ECTSI3.830e-17284.62Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocar... [more]
A0A836CHB0_9STRA7.030e-13366.54Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Tribone... [more]
A0A7S2R252_9STRA7.730e-10756.06Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A0W8D2C2_PHYNI7.550e-10552.69Arabinan endo-1 n=1 Tax=Phytophthora nicotianae Ta... [more]
W2NFT1_PHYPR2.810e-10352.69X8 domain-containing protein n=10 Tax=Phytophthora... [more]
A0A225WK23_9STRA1.200e-10251.54Glucan 1,3-beta-glucosidase n=2 Tax=Phytophthora T... [more]
A0A225WPV7_9STRA2.060e-10151.15Exo-1,3-beta-glucanase n=2 Tax=Phytophthora TaxID=... [more]
A0A0M0J8Y9_9EUKA2.380e-10154.34Glucan-beta n=1 Tax=Chrysochromulina tobinii TaxID... [more]
A0A7S2WMK6_9STRA3.190e-10154.62Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A421F7K3_9STRA6.320e-10151.54X8 domain-containing protein n=3 Tax=Phytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9861contigS-dermatodea_contig9861:1782..7954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue2.6e-138
Seed eggNOG ortholog2880.D7G419
KEGG rclassRC00467
KEGG koko:K01210
KEGG ReactionR00308,R03115
KEGG Pathwayko00500,map00500
GOsGO:0000272,GO:0003674,GO:0003824,GO:0004338,GO:0004553,GO:0005575,GO:0005576,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009986,GO:0009987,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0071704,GO:1901575
EggNOG free text desc.Belongs to the glycosyl hydrolase 5 (cellulase A) family
EggNOG OGs2QPYU@2759,COG2730@1
EC3.2.1.58
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionExo-1,3-beta-glucanase, family GH5
Ec32 orthologEc-19_000430.1
Exons6
Model size798
Cds size798
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9861.17826.1prot_S-dermatodea_contig9861.17826.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9861 1782..7954 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925435.6271708-CDS-S-dermatodea_contig9861:1781..18921622925435.6271708-CDS-S-dermatodea_contig9861:1781..1892Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 1782..1892 -
1694079931.910797-CDS-S-dermatodea_contig9861:1781..18921694079931.910797-CDS-S-dermatodea_contig9861:1781..1892Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 1782..1892 -
1622925435.637739-CDS-S-dermatodea_contig9861:2420..25701622925435.637739-CDS-S-dermatodea_contig9861:2420..2570Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 2421..2570 -
1694079931.9321306-CDS-S-dermatodea_contig9861:2420..25701694079931.9321306-CDS-S-dermatodea_contig9861:2420..2570Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 2421..2570 -
1622925435.6557376-CDS-S-dermatodea_contig9861:4510..46301622925435.6557376-CDS-S-dermatodea_contig9861:4510..4630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 4511..4630 -
1694079931.942729-CDS-S-dermatodea_contig9861:4510..46301694079931.942729-CDS-S-dermatodea_contig9861:4510..4630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 4511..4630 -
1622925435.6765919-CDS-S-dermatodea_contig9861:5187..53311622925435.6765919-CDS-S-dermatodea_contig9861:5187..5331Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 5188..5331 -
1694079931.952629-CDS-S-dermatodea_contig9861:5187..53311694079931.952629-CDS-S-dermatodea_contig9861:5187..5331Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 5188..5331 -
1622925435.685941-CDS-S-dermatodea_contig9861:6299..63721622925435.685941-CDS-S-dermatodea_contig9861:6299..6372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 6300..6372 -
1694079931.9709451-CDS-S-dermatodea_contig9861:6299..63721694079931.9709451-CDS-S-dermatodea_contig9861:6299..6372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 6300..6372 -
1622925435.6955028-CDS-S-dermatodea_contig9861:7754..79541622925435.6955028-CDS-S-dermatodea_contig9861:7754..7954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 7755..7954 -
1694079931.983282-CDS-S-dermatodea_contig9861:7754..79541694079931.983282-CDS-S-dermatodea_contig9861:7754..7954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9861 7755..7954 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9861.17826.1

>prot_S-dermatodea_contig9861.17826.1 ID=prot_S-dermatodea_contig9861.17826.1|Name=mRNA_S-dermatodea_contig9861.17826.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=266bp
MRQGNKQLRRHWKAWVKEGDIAQMATVGINTVRLPVGDWMYQPYGPYVGC
TDGALDEVDRLFELCRRFGIRVLLDIHAVAGSQNGFDNSGQAMDIEWTTY
SGNLVSGTATFVHWPYRAARWIGDFNRNTGQYDTKNETAIAHTLLVIQTM
VDMYANETAVMGLQPLNEPWQFTPIEWLKDFYWDGYHIVREQAPHWLFLM
HDSFNFDVYTWGDFMKNCPTIGLDTHIYQAWTTPGPQAGYLANACDAKKR
IVAMEKMGMPVVGEK*
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mRNA from alignment at S-dermatodea_contig9861:1782..7954-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9861.17826.1 ID=mRNA_S-dermatodea_contig9861.17826.1|Name=mRNA_S-dermatodea_contig9861.17826.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6173bp|location=Sequence derived from alignment at S-dermatodea_contig9861:1782..7954- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGCCAGGGAAACAAGCAGCTTAGGCGGCACTGGAAGGCGTGGGTGAA
GGAAGGAGACATCGCGCAGATGGCGACGGTGGGCATCAATACCGTCAGGC
TCCCCGTGGGTGACTGGATGTACCAGCCTTATGGCCCCTACGTGGGCTGC
ACCGACGGAGCTCTCGATGAAGTGGACCGCCTCTTCGAGCTTTGCCGCAG
GTAGGGCCGGAAACAAGTACCATGTATGCGTGCTTTCCCTGTCCAGACGA
TGTGCTGGCCAACGCGCCTCGGGTAGCCGCGGGTACCCTCCAGCCGCGGC
TGGGCTGTGCGTTATGGCGGCTGCAGGGCTGTCATCGTCTTCAGACGCGA
GCGGATGCACCGTGCGATGTCGTGTGCTGGGGTAATGGATCGGATCACGA
ATCACTTGTAGATTTCCTGTCGTGCGGTGCTTTGTGGTTTTTTAATCGGT
GTTGATTGATGACGTCGAGCGTGTCTTGCTCTCTTGTTCGTACAATAGCC
ATTTCGAAGCGTATGTGATAGAAACCGCGCTGGTTTTGCTGCGACGAATT
TGTTGGTCTGGCGTGTAAAGTCTCCCAACTGCTCTGCTGCGACCGAAACC
ACTACCGAGAGGCGGCTGTTGATTGCGAATACGTTTTGCGGACAGTGTCA
GTGGTCCGGGCCAGCGAAAGTTCTCCATCATGAAGTAGTTACCCACCCCT
CGGCGCGTGAACACGCCGAGCGTCGTACCGTCGCGCACACGACATATGCC
TACGTGAAATTTCGCCGAAGCTCCCCCTTTTCACTGACCCGGCCTGAACT
AAAGCTAAAAAAGGGCACCACCGTGCTTTGTAGTCATAGCAGGGCACAAC
TGCACGCCTTTTGACCTCTCCCAACGAGTGTTCGGTTGCACGCTAACCAG
GAGGGCGCAATACAAAAAAACCTGATGAGAACCGCCGAGCTGGCAAGTAC
ACCCTTTTGGGACTTACTCTGTTTTTGGGGCGAATACCTTCACCACGGGT
ATACTAAGTACAATATGTGGTCTACTATAATGCGTACATGACGGTAAAGG
CTGCACGCACATGCGCACCTCCGTGCATATTAGCTATCAGTATAATAAGC
GTGGCGGGCGTATCGTGACTCTTCCACCGCGTGTACGACGAGGAGAAGGC
ACCGTTCGGTTACAGTACCTGTTCGATGTGAAATAGTATATGTTATTTAG
TATACAGTAGCCACCGTTCGGGTACTGTACCTATTCCATGTGAAATAAGG
TGCGGGCAGATGGCCTAACCCCGAAAACATGATCCGTCCCAAAAGGGTTA
AGGGAGCGCTGAACCCGGCGATGCGCACAGCAATCAAATTCAAGGCAGGA
ACCGAACCGGCGGGGGGCCTGAGAGAACCTCCAGACCACGGCCGTGCAAT
CGTACGTAGCTGGAAAGGTTTAAATTACAGAGCGTAGTTGAGATAGAAAA
TGCTTTTGACTTGGGGCGCTTCGGCAGAAAATACGTTGGGCGCTGCAGAT
GGCGACGAGAAAGCATGGGGTTGTATGTCCCCATACCTCTCCTTTGCCCC
CCTTCCTATTCAATTTGTTTTCGTGTCGACAGGTTTGGCATTCGGGTGCT
GCTAGACATACACGCTGTCGCCGGGAGCCAGAACGGCTTCGACAACTCAG
GGCAGGTAAATATACCCTTCTGCAGCAACAACCGATGGTAGGCGTCTTTC
CCCCTTCGGAGAACTAGTATAATGGGTAGCGACGGCTACACCCCGTGAGG
TGTGCGTGGTCGCCCAAAGCCAAAAACAAGTTGTTTGGCGCTCAACACAA
ATATCAAGGTGTCTGGCATCAACTCAGCCCTCTCTAAAACCCCTACCATG
TTTAACACGCAAAACGTATAGGAAATAGTGTGGGCATGGTCACTCTAAAA
TCGCTATTAAAACATCGGCCAAAGCGCTATTAACTAATGTAGATACGCCG
TGCGATTGGCGAGGTGAGGTTCATACCTCAGCCAATCCGGTGTTGACTGG
AGCGGCCGTCGCCCTTATCCGCGTTGTAAGGGAAGATTGACGGACGCGGG
AGGGGGTGTGAAGGGCTGCTGCTTTCATCAACTACGCCGGGCCGAAAATA
CTTTTCGAATCGAAAACCACACGCCGCCGGGAGAAATACATTGTACTCTC
GGCGCGTGAGAAGTGAAGTATCGCCTCTGCGAATGAGGTTGGGTCGCTGG
GTGGGAGCGATTCCGGGCATCATCCGACGGCTGTTGTGCTTGCTCCTTCC
GTTGGCCTCAGTCCCCATGCAGCAACCTTGTGCTATTTGCCATGTTCTGC
ATTTTTGTTGCTGTTGGAGATGAGGGTCTCCACTTACACTCGGTCCTCTC
ATCGAGATCATTTTTGAAGGACACTGCCTCTTTGCGAGGCACAGACTGTC
CCTCGCCCAGCTTCTCTGGTGTACGCCATGGCGTCAGTGCACAGAGGCCA
CTTTCTAATGCGCACCACAGCACGGTATTGCCTCGACGGGAGCGTTGAGT
GTGCCCTGCTCCGTACGTCTTTTTCAAACAGACAGAAGCACCCCCAATAA
CCGTCGAAGTTCTGAAATCTGATAGAGAAACTCGTCGTTTTTTGCCGTGT
TTTTTTCGCTCTTATCGCTTAAGGCCATGGACATCGAGTGGACCACGTAC
TCGGGCAACCTGGTTTCGGGCACCGCGACGTTCGTGCACTGGCCGTACCG
CGCCGCCCGCTGGATAGGCGACTTCAACCGCAACACGGGGCAGTACGACA
CGAAGAACGAAACCGCGGTGAGATATGCGCGAATATTTCGGCAACATGGG
CGGGCGACAGTAGCCAGCTCATCTGTAGTGTCGCCGCGTCTTGATGTGCT
GCTGTCCGGAGGTAGCTGATTTGGTGCGGATTTGTTTCAGCCGGGGTTCG
CCACAGCAGTAGTGATCATCGATAAATACCGGAACCCCATAGCAACCCGT
ATAAGCTGTTTTGACCTTGCTGTTCCCCTTCAGACGTGTGCTTGTTTTGT
TCTTCAGCTCATGCCGTGCCAATCGTATATCCGTCTTGGCTCGACCGGCT
GTCGAACAGAGCACTGATTGTCGAGCAGACTTGTGTATCTCGCGGTAACC
GTCTCCATTGATGGACTCCCAAGTCGTGGCACTGCATCGCATTTCTCTCC
ACGGAACACGCTTGGCAGCTTGCACAGTCTTGGGTGTTGGTCTTCCTTGG
GTCGGGATTGTCGGCCTCTTTTTGCAGCCCTCCGGTGGAGGTAATAGTGG
CCCATGATGCGTCGCGACTGAACTTTTCCGTTCGGTGTATTGCTTTTGTG
CGTTTTTTTTTTTCGTCCCGCCAGATCGCACATACGCTCCTGGTGATCCA
GACGATGGTGGACATGTACGCGAACGAGACCGCTGTGATGGGTCTGCAGC
CCCTGAACGAGCCCTGGCAGTTCACCCCCATCGAGTGGCTCAAGGTGGCG
TGCTCTTTCTTGCCCAGTCCCGCCTGTGCCGTCCTGGCTTGCTTTGCTTT
CTTTTCGTCCATTAGAGCGTGCGGTGGTTTTGAGGGACGTGTGGTGCTCC
CGGGCCATTTGTAAGTTGTACTTTGCTGCTTTATTTTTTTTACCCTTTTG
GGACTGATTCAATTTAATCGCCGAAAACCATGACTAGGGGAATATCGCGG
TGACGGGTGGAGGCACAGGCGCAGCACCATATTATCTTGTTAGTTAATGG
TGCTTTGACCGATTTTTAGTATTACGGGGGTAGGCAGTAATCAGGACCAA
ATCTCATAACCATGATTACCTAACTATTCCGACCATGAATACCCAAACAA
AAAAAGTGTTCATGAAAAACAAAAACAGACACGAGATATGACCATACACA
AGAGCATCGACTTTGAAATCTCGATATTTCCAGCTTATTTCGATTTTCTA
GGTTGATACTTGCGCCAAATTTGGACCTGTTAACTATGGTCCCCCCGTAA
TAGCGATTTTAGAGACGGTTTCTGCAACACGAATCCTACACGATTTTTGT
CGCCAAAAAGTGATGCCAAACAACTTGATGTTTGTATTGACCGCCAAAAA
AACTTGATTTTAGAGTTAAGCGACCACGCCAACACCTCACGGGCGTTGCC
GTGGCTACCTAATAGTCCAAGCTGAGCGTAGCAGATTTGTCGTCGCTCTT
TCACCGTGGCTACGACGGGGAGTATATTGTATACTATATAGTATACAGTA
TATATATAGTCCGTAGTATATAGTATGTAGTATATAGTAGCCGCCGTTAG
CTCGGTCACGGTTCGACTGTGAAATACGGTGCGGGCAGATAGCCTAACCC
CGAAAACCAGCTCGGTCGCAAAAGTGGCTAAGGGCGTTCGGCGCCCTCGG
ATCGTTGGATTGGAGTCTTTCAAGTGTAGTAATTGACGGCTGGGATGTAA
ATGCAAGGAGGCGTTTTTTTTCCCGTTTGGGAGTAAACCTGTTTGTTTTT
GGGAGCCATCTGCCCGCACCGTGTTTCACATTGAGCCGTGACCGAACGGC
GGCTAGTTAGTGTATAGCATACTATTATAATATGCTCCTCGCTGTAGGTA
GTGGTGGAAGCTATGATTAACCTAGCCACGCTTAGCTTGCATGCGCGGTG
GTGCACTTGTGCGTGCACCCGACACCGCGATATATTATTATTTAATAGTA
TAATATTAATACCATACTATTAATACCATACAGTACCCGTAGTGACGATA
TTCCGCTCAAAAACGCAACAAATATATACTATGTACTATGTGATATATAC
TATAGACCCGGTCCCAAACAGGTGGAGTCCGGCATTATGTGGTCCTCACG
TTTCCCTGGCAGGGGGCAAGACCATGCCCAAAACATTTGTCACTTGCAGT
GCAGCCCCTTCGTGCTGTCGCACTGGTTGTTGGTGTGTGGCGTCGTTGAC
ACTCAGTGTTCTAGCGCGTTTCGTGGCAAGAGTAGCCAACACTTCGAGGG
AGGGTAGCGGCCTGCCCCACAGGGTGATCCTACAGCGCCTGCCCTGAACT
GCGACAACATTTCCAGAAAATACCGTGTACGATGCAAACGTTAACGTTCC
TCGATTTGTTGCTCGGCAAATAGCATTCTTTATCCCTTTTCTCGAGGCTG
TTCCCTTGCAATGCCTGCCGCTAACACCAATCTACAACCGCGGCTGACGA
ATGTCCCGGAACGCGCTGTCTAGGGTTGTCTTCAACCAGAGAATAAAAAA
AGAAAGGACCGGAATGTGCGACCGAAAAACCGTCTCGAAATAAATGCCTT
CTCGTTAAGCGAAAATAGTACTCGAGGAGCACATCAATCTGCTATATTTT
AACGATTTTACACCGTTCGTCGAAAAATACTCTAAAAAATGTCCCGGCAC
CCGTGCCTTCCCTATTGGTTCCCGTTTCCCGCAGGACTTCTACTGGGATG
GCTACCACATCGTCAGGGAACAGGCGCCGCACTGGTTGTTCCTCATGCAC
GACTCGTTTAACTTCGACGTCTACACCTGGGGAGACTTCATGAAGAATTG
CCCCACCATCGGCCTCGACACGCACATTTATCAGGTGCGCGCGCCCGCAG
ATGTGCACTGCGATATCGGTGACCTTGTACTATTTAGGTGCGATATTTAA
AACGCTGTTGTTGCTGCTTGCTGTGGTTTAGTATTCCCCCCCGCGCGTAA
GGACGCGTGGTCAATGGTCTAACAGCTAAGGCATGCAAAACATGAGTACG
CGTTTCGTCGACTGCTTCGTCTCTGCTGCCCTGCTGCCAGCCCTCTGGCG
TCACGAATCAATCGCGAGGCAGGCTTATTAATAGCTAGGCTTGGCTCTTG
CTGCCGGTTTCCACGCAGTGCTACCGCAGCCCTGTACGCGTCCTGGACAC
CGGGTCTGTAGCAACCACGCTTAAGCCTAAGACCCCTGTGGTCACAAGGA
ATCGTCGCATCTCTCCCCGGTCCTTGCCTTAGTTTTTGTTATCGCGAAAG
TAATGGGTTCGGCACTCCCGACAGCTCGCCGATTTATCGGATTTTGACGT
TGGAGTCCCTTTTATGTCCAACACCTCTCGATCTTCTGGGTCTTTTTTTA
ATTATGTTTCAGGCCTGGACCACGCCGGGGCCTCAAGCGGGCTACCTGGC
GAATGCCTGCGACGCGAAGAAACGGATTGTGGCAATGGAGAAGATGGGCA
TGCCCGTCGTCGGTGAGAAATAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig9861:1782..7954-

>mRNA_S-dermatodea_contig9861.17826.1 ID=mRNA_S-dermatodea_contig9861.17826.1|Name=mRNA_S-dermatodea_contig9861.17826.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at S-dermatodea_contig9861:1782..7954- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGCCAGGGAAACAAGCAGCTTAGGCGGCACTGGAAGGCGTGGGTGAA
GGAAGGAGACATCGCGCAGATGGCGACGGTGGGCATCAATACCGTCAGGC
TCCCCGTGGGTGACTGGATGTACCAGCCTTATGGCCCCTACGTGGGCTGC
ACCGACGGAGCTCTCGATGAAGTGGACCGCCTCTTCGAGCTTTGCCGCAG
ATGCGCCAGGGAAACAAGCAGCTTAGGCGGCACTGGAAGGCGTGGGTGAA
GGAAGGAGACATCGCGCAGATGGCGACGGTGGGCATCAATACCGTCAGGC
TCCCCGTGGGTGACTGGATGTACCAGCCTTATGGCCCCTACGTGGGCTGC
ACCGACGGAGCTCTCGATGAAGTGGACCGCCTCTTCGAGCTTTGCCGCAG
GTTTGGCATTCGGGTGCTGCTAGACATACACGCTGTCGCCGGGAGCCAGA
ACGGCTTCGACAACTCAGGGCAGGTTTGGCATTCGGGTGCTGCTAGACAT
ACACGCTGTCGCCGGGAGCCAGAACGGCTTCGACAACTCAGGGCAGGCCA
TGGACATCGAGTGGACCACGTACTCGGGCAACCTGGTTTCGGGCACCGCG
ACGTTCGTGCACTGGCCGTACCGCGCCGCCCGCTGGATAGGCGACTTCAA
CCGCAACACGGGGCAGTACGACACGAAGAACGAAACCGCGGCCATGGACA
TCGAGTGGACCACGTACTCGGGCAACCTGGTTTCGGGCACCGCGACGTTC
GTGCACTGGCCGTACCGCGCCGCCCGCTGGATAGGCGACTTCAACCGCAA
CACGGGGCAGTACGACACGAAGAACGAAACCGCGATCGCACATACGCTCC
TGGTGATCCAGACGATGGTGGACATGTACGCGAACGAGACCGCTGTGATG
GGTCTGCAGCCCCTGAACGAGCCCTGGCAGTTCACCCCCATCGAGTGGCT
CAAGATCGCACATACGCTCCTGGTGATCCAGACGATGGTGGACATGTACG
CGAACGAGACCGCTGTGATGGGTCTGCAGCCCCTGAACGAGCCCTGGCAG
TTCACCCCCATCGAGTGGCTCAAGGACTTCTACTGGGATGGCTACCACAT
CGTCAGGGAACAGGCGCCGCACTGGTTGTTCCTCATGCACGACTCGTTTA
ACTTCGACGTCTACACCTGGGGAGACTTCATGAAGAATTGCCCCACCATC
GGCCTCGACACGCACATTTATCAGGACTTCTACTGGGATGGCTACCACAT
CGTCAGGGAACAGGCGCCGCACTGGTTGTTCCTCATGCACGACTCGTTTA
ACTTCGACGTCTACACCTGGGGAGACTTCATGAAGAATTGCCCCACCATC
GGCCTCGACACGCACATTTATCAGGCCTGGACCACGCCGGGGCCTCAAGC
GGGCTACCTGGCGAATGCCTGCGACGCGAAGAAACGGATTGTGGCAATGG
AGAAGATGGGCATGCCCGTCGTCGGTGAGAAATAAGCCTGGACCACGCCG
GGGCCTCAAGCGGGCTACCTGGCGAATGCCTGCGACGCGAAGAAACGGAT
TGTGGCAATGGAGAAGATGGGCATGCCCGTCGTCGGTGAGAAATAA
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