mRNA_S-dermatodea_contig9860.17825.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9860.17825.1
Unique NamemRNA_S-dermatodea_contig9860.17825.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 6.120e-177
Identity = 301/417 (72.18%), Postives = 333/417 (79.86%), Query Frame = 1
Query:    1 ISTVVEGVATGIIESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLD---QILARLQPRP--KLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDR---VRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLE-ICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDI 1224
            ISTVVE VATGIIE GAATP VAPLCVAL+KAKGIVDGASRNKEEL E      LI VQVIDKAKASNTSTIDV+PLQ CVDKL+EVA+RYHDQG LAR+AQFRRDGDDI+RLRARIEA+VPIMGLAGVVNI ++L+   QILARLQPRP  KLA VPPG+P G++W+ VRD V D V  IL GD  P VAALTG+SGAGK+TAAA MV  R+  IR    ETEDQARTR+DR   VRARFSDGVV+LRVGKG G ADRLP LMRKLAK LHE V+K    APE GE+GESYVKK++  TKKRCLVVADDVWE  VV KL+ETGMWVLLTTRFP +V+P E V VD+L   EAE+VLRGAA LP G RLCD A+QVL+ ICGF AMDIAFVGSWS VR        +  WA AV+ I
Sbjct:   97 ISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTD----DSGAWAEAVSKI 508          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 1.060e-168
Identity = 263/416 (63.22%), Postives = 310/416 (74.52%), Query Frame = 1
Query:    1 ISTVVEGVATGIIESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQ----ILARLQPRPKLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASG-VPKSNRMWARAVTDIKAQ 1233
            ++T V  V T I++ G   PFV  LC A++ AK +VD AS N+ +L +       I VQV++K K      ++V+PL+ CV +LEEVAERY  +    R+  F++D +DIR L  RI   +  +  AGVV +G  + Q    ILARLQPRPKLA VPPGVPMGQSW+T+RDGVVDRV DILGGDGGP VAAL GRSGAGKTTAAAAMVGERQGPI P   E E+QA TRLDR+RARFSDGVVWLRVGKGAG ADRLP LMRKLAK LHE V+KS+VD P +GE+GESYVKKIVE    +C VVADDVWE  VVEKLRETGMW+LLT R P MV+P ERVFVD+L + EA+NVLRGAA LPPG  LCD A++VLE+CG+ AMDIAFVGSWSSVR+     PKS+R WA  V +I AQ
Sbjct:   12 MATEVIEVTTSILKIGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEVGNLMQQQVGEILARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEPNERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEITAQ 427          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 512 bits (1319), Expect = 3.760e-164
Identity = 280/409 (68.46%), Postives = 315/409 (77.02%), Query Frame = 1
Query:    7 TVVEGVATGIIESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQILARLQPRPKLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            TVV+  A G IE GA+ P VAPLC AL+KAKG+VD ASRNKEEL E      +I +QVIDKAKAS TSTIDV PLQ+CVDKL+EVAERYHD+GRLAR+AQFRRDG+DI+RLR RIE VVPIMGL+GVVN GEKLDQILARLQP PKLA VP   P  +S++ VRDGVVDRVC ILGGDGGP +AALTG SGAGKTT+AAAMVGER                   DRVRA F DGVVWL VG+ AG ADRLP LM  LAK LHE VMK  VDAP  G++G SYV+KIV   K RCLVVADDVWE  VV+KLRETGMWVLLTTRFP M +P ERV +D L   EAE+VLRGAA LP G RLCD +++VLEICG  AMD AFVGSW+SVR+ +GVPKSN+ W R V ++ AQ
Sbjct:   21 TVVQSFAEGAIEIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERG------------------DRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAP-TGDDGVSYVRKIVSQEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQ 410          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5K0A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A6_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 8.570e-117
Identity = 192/275 (69.82%), Postives = 214/275 (77.82%), Query Frame = 1
Query:  415 ILARLQPRPKLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAA-MVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASG-VPKSNRMWARAVTDIKAQ 1233
            + ARL PRPKL SVPPGVPMGQSW+T+RDGVVDRV  ILGGDGGP  AAL G+ GAGKTTAAAA MVGERQGPI P   E E+QARTRLDR+RARFSDGV+WLRVGKGAG +DRLP LMRKLAK LHE V+KSHVDAP V                  CLVVA+DVWE  VVEKLRETGMW+LLTTR P MV+P E+VFVD+L E EA+NVLR AA LPPG  LCD A++VLE+CG+ AMDIAFVGSWSSV +     PKS+R WA  VT+I AQ
Sbjct:  268 VQARLPPRPKLVSVPPGVPMGQSWHTMRDGVVDRVYAILGGDGGPAAAALGGQRGAGKTTAAAAAMVGERQGPIHPLAHENEEQARTRLDRLRARFSDGVMWLRVGKGAGASDRLPLLMRKLAKALHEEVLKSHVDAPGVA----------------ACLVVAEDVWELPVVEKLRETGMWILLTTRNPSMVEPNEKVFVDRLEEMEAQNVLRRAARLPPGQSLCDAAMKVLEVCGYVAMDIAFVGSWSSVNTVGNFAPKSSRAWAGVVTEITAQ 526          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5KUE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE6_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 1.470e-113
Identity = 194/304 (63.82%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  289 LARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQILARLQPRPKLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSA-SGVPKSNR 1197
            L+R+A+FR  GD+I+ LRA I+AVVPIMGLAGVVN+ EKL+++LARLQPRP+LA VP G+P+ QSW  VR GV DRVC ILGG   P VAALTGRSG GKTT+AAA++ ER GPI PR GETED ARTRLDR                G G  +R P LM  LAK  +E VM+  VD P  GE+GESYV K V     R LVVADDV E EVVEKLR+TGMWVLLTTR   MV+P ERV VD+L + EAE+VLRGAA LP G+RLCDDA++VLEICG  AMDIAFVGSWSSVR+A +G P  +R
Sbjct:   26 LSRLARFRAFGDNIQGLRASIKAVVPIMGLAGVVNLDEKLEKVLARLQPRPQLAPVPEGIPVRQSWPAVRHGVEDRVCRILGGGRRPAVAALTGRSGTGKTTSAAAVLRER-GPIHPRAGETEDMARTRLDR----------------GEGDENRSPSLMHTLAKARYEDVMEKRVDTPAAGEDGESYVNKFVSRESLRYLVVADDVREVEVVEKLRKTGMWVLLTTRIASMVEPNERVLVDQLTQEEAEDVLRGAAGLPVGYRLCDDAMKVLEICGLRAMDIAFVGSWSSVRTADNGAPIDSR 312          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.590e-68
Identity = 161/416 (38.70%), Postives = 226/416 (54.33%), Query Frame = 1
Query:   40 ESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQILARLQP---------RPKLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEG--ESYVKKIVE-----LTKKRCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVK--PGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            E G   P V  +   L   +   +    N E L         +   VI K + +++S ++VAPL+ CV+  E+   R   +G   R  +   D D++  L +R++++   +GLAG+ ++  K+D + A L              +A+VP G P+  SW+  RD VVD V + L     P V  L GRSG+GKTT AA++VGE  G  R    ET DQ   RL+RVR  F DGVVWLRVG+G G A+R+P LM +LAKT+ E +  S+  AP     G   +++   V        +KRCLVVADDVWE +++E+LR TGMWVL T+R P +V+   G  V VD+L + EAE +LRGAA L  G  L   A QV+E C   A  + FVG WS+V+ +         WA AV+ I A+
Sbjct:   75 ELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTG--RRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSD----DEEDWAEAVSAIDAE 484          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 7.210e-63
Identity = 161/427 (37.70%), Postives = 232/427 (54.33%), Query Frame = 1
Query:    4 STVVEGVATGIIESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEK-------LDQILARLQPRP----KLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKK----RCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKP--GERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            ST+ + V+  + + G   P + P+   L   +  V+    N+EELA        I    + K +    S +DVAPL+ CV+  +  AER   +G+++R+ +   D  +I  L + ++ +   +GLAG+  +  K       LD+I  RL+  P    KLA+VP G P+ +SW+  R   +  V D L G     V AL G SG+GKTT AA +V                    R   VR  FSDG+VWL V +GA    RLP LM +LA+ +HE +  S    P   E+  +Y+K+ +E   K    +CLVVAD+VWEE+VV KL ETGMWVLL+TR   +VK   G+ V VD+L + +AE+VL+ AA LP   RL DDAV ++++CG  AMD+AFVG WS+VR     P S   W+ A + I+ +
Sbjct:   21 STISDAVSCAV-DLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIE-SEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV--------------------RSTEVREAFSDGIVWLPVNEGA--KKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHD-PAS---WSDAASTIRTE 419          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 4.240e-60
Identity = 153/424 (36.08%), Postives = 223/424 (52.59%), Query Frame = 1
Query:   58 PFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKL-------------------------DQILARLQPRP-KLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKK----RCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMV--KPGERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            P + P+   L   +  V+    N+EEL         +   V+ K++ S+ S +D+ P+++C++   E+ ER   +G++ R+     D ++I R++A I  +   + LAGV  +  K                          + I+ RL   P KLA +P   P+ +SW+  R  V++RV + L   GGP +  L G SG+GKTTAA+ +V                    R + VR  FSDGVVWL V  GA   DRLP LM +LA  + E V       P   ++G +Y+K+ ++        +CLVVAD+VWE+EVV KL ETGMWVLL+TR   +V    GE V VD++ E EAE+VLR A+ LPP  RL DDAV ++E+CG  AMD+AFVG WS+VR  S        W+ A   ++A+
Sbjct:   45 PHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIV--------------------RSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVGGRR---PATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRS----DRTAWSDAAGKVRAE 439          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 3.810e-58
Identity = 157/438 (35.84%), Postives = 227/438 (51.83%), Query Frame = 1
Query:   40 ESGAATPFVAPLCVALVKAKGIVDGASRNKEELAEXXXXXXLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKL--------------------------DQILARLQ------PRP--KLASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKK----RCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKP--GERVFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            + G   P + P+   L   +  V+   RN E+L         I    I K +   T  +DVAPL+ CV+ +E+  ERY  +G+++R+ +   D  DI +L+ R+  +   + LAG+ ++ + L                          +++LA+ +      P+P  K+A+VP G P  +SW+  R  V + V   L  DGGP +  L G SGAGKTTAA+A+V                        VR  FSDG+VWL V +G    D LP LM +LA+ + E +  S    P   ++G +YVK+ VE        +CLVVAD+VWE +VV +L ETGMW+LL+TR   +VK   GE V VD+L E EAE+VLR AA L P  RL DDA  ++E+CG  AMD+AFVG WS+VR      +    W+ A   ++A+
Sbjct:   32 DLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTE-LDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIV--------------------VRETFSDGIVWLPVNEGVH--DNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGR----QDRTAWSDAACKVRAE 442          
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.660e-51
Identity = 136/376 (36.17%), Postives = 200/376 (53.19%), Query Frame = 1
Query:  205 TSTIDVAPLQKCVDKLEEVAERYHDQGRLARMAQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQI-------------------------LARLQPRPK-LASVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAAAAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGADRLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKK----RCLVVADDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGER---VFVDKLGETEAENVLRGAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRMWARAVTDIKAQ 1233
            +S +   PL +CV+ +    ER   +G L+R+ +   D ++I  L+ R+E +   + LAG+  +G K++ +                          AR+   P+ LA+VP G P  +SW+  R  V+  VCD L G+GGP +  L G SG+GKTTAAA +V                    R   VR  FSDG+VWL V  GA   +RL  LM  LA+ + E +  S    P   ++G +Y ++ ++        +CLVVAD+VWEE V+ KL ETGMWVLL+TR   +V+  E    V VD+L E +A +VLR A+ L P  RL D+AV+++E+CG  AMD+AFVG WS+VR  S        W+ A   ++++
Sbjct:   72 SSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV--------------------RSTEVREAFSDGIVWLSVNDGA--TERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRS----DRTAWSDAAHKVRSK 421          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9860.17825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE50_9PHAE6.120e-17772.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G330_ECTSI1.060e-16863.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSI2_9PHAE3.760e-16468.46NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K0A6_9PHAE8.570e-11769.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUE6_9PHAE1.470e-11363.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI1.590e-6838.70NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZW8_ECTSI7.210e-6337.70NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZY7_ECTSI4.240e-6036.08NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE3.810e-5835.84NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE2.660e-5136.17NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9860contigS-dermatodea_contig9860:4544..5952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue8.7e-64
Seed eggNOG ortholog2880.D8LFN6
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1233
Cds size1233
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925435.5819023-CDS-S-dermatodea_contig9860:4543..53561622925435.5819023-CDS-S-dermatodea_contig9860:4543..5356Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9860 4544..5356 -
1694079931.8735938-CDS-S-dermatodea_contig9860:4543..53561694079931.8735938-CDS-S-dermatodea_contig9860:4543..5356Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9860 4544..5356 -
1622925435.5974507-CDS-S-dermatodea_contig9860:5532..59521622925435.5974507-CDS-S-dermatodea_contig9860:5532..5952Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9860 5533..5952 -
1694079931.897631-CDS-S-dermatodea_contig9860:5532..59521694079931.897631-CDS-S-dermatodea_contig9860:5532..5952Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9860 5533..5952 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9860.17825.1prot_S-dermatodea_contig9860.17825.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9860 4544..5952 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9860.17825.1

>prot_S-dermatodea_contig9860.17825.1 ID=prot_S-dermatodea_contig9860.17825.1|Name=mRNA_S-dermatodea_contig9860.17825.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=411bp
ISTVVEGVATGIIESGAATPFVAPLCVALVKAKGIVDGASRNKEELAELC
ELCDLIAVQVIDKAKASNTSTIDVAPLQKCVDKLEEVAERYHDQGRLARM
AQFRRDGDDIRRLRARIEAVVPIMGLAGVVNIGEKLDQILARLQPRPKLA
SVPPGVPMGQSWYTVRDGVVDRVCDILGGDGGPVVAALTGRSGAGKTTAA
AAMVGERQGPIRPRTGETEDQARTRLDRVRARFSDGVVWLRVGKGAGGAD
RLPPLMRKLAKTLHEHVMKSHVDAPEVGEEGESYVKKIVELTKKRCLVVA
DDVWEEEVVEKLRETGMWVLLTTRFPVMVKPGERVFVDKLGETEAENVLR
GAANLPPGHRLCDDAVQVLEICGFTAMDIAFVGSWSSVRSASGVPKSNRM
WARAVTDIKAQ
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mRNA from alignment at S-dermatodea_contig9860:4544..5952-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9860.17825.1 ID=mRNA_S-dermatodea_contig9860.17825.1|Name=mRNA_S-dermatodea_contig9860.17825.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1409bp|location=Sequence derived from alignment at S-dermatodea_contig9860:4544..5952- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATATCGACTGTGGTAGAAGGGGTTGCGACGGGAATTATCGAAAGCGGTGC GGCCACGCCATTCGTGGCTCCTCTCTGCGTAGCCCTGGTCAAGGCCAAGG GCATCGTAGATGGGGCCAGTCGCAACAAGGAGGAGCTGGCGGAGCTGTGC GAGCTGTGCGACTTGATCGCGGTGCAGGTGATCGACAAGGCCAAGGCTTC GAATACCTCGACGATCGATGTAGCCCCCCTCCAAAAGTGTGTCGATAAGC TCGAAGAGGTGGCCGAACGCTACCACGATCAAGGGCGCTTGGCCAGGATG GCGCAATTTCGCAGAGACGGCGACGACATCCGGAGGCTTCGCGCCCGCAT CGAGGCCGTCGTTCCAATCATGGGGCTCGCGGGCGTGGTGAACATCGGGG AGAAATTGGACCAAATTTTGGTGAGACCACCTACTCTCGAGTTCGCTCAC AGCCAGAAAAAGCAGGCCGATTTAGCCATCATGTAAATTTCCCAGGCCTT TAGCGAAGAGTGTTCAGGCAGTACAGCACCACACAAACGGTTCGATCCTG TCTCTCATGCCTTGATCCCTCTTTCATCCCACCCGACCTTGCACAGGCTC GTCTGCAGCCGCGACCCAAGCTGGCGTCGGTGCCTCCGGGAGTACCGATG GGGCAGTCGTGGTACACCGTGCGCGATGGGGTGGTGGACAGAGTGTGCGA TATCCTCGGTGGGGACGGAGGGCCAGTGGTTGCGGCACTGACGGGACGGA GCGGGGCGGGCAAAACCACCGCCGCCGCCGCCATGGTGGGAGAGCGGCAG GGCCCTATCCGCCCGCGCACTGGTGAGACCGAGGACCAGGCGCGTACCCG CCTGGATCGCGTGAGGGCGCGCTTTTCCGACGGCGTGGTGTGGCTGCGGG TGGGCAAGGGGGCAGGGGGCGCAGACCGCTTACCTCCTCTAATGCGCAAG TTGGCCAAGACGCTTCACGAGCACGTGATGAAATCACATGTCGATGCTCC GGAGGTGGGTGAGGAAGGTGAGAGCTACGTGAAAAAGATCGTGGAACTAA CGAAGAAGCGGTGCCTTGTGGTGGCCGACGATGTGTGGGAGGAAGAAGTG GTCGAGAAGCTGAGAGAGACGGGCATGTGGGTGCTCTTGACCACGCGATT CCCCGTGATGGTGAAACCTGGTGAGCGGGTGTTCGTCGACAAACTTGGGG AGACGGAGGCGGAGAACGTGCTGCGCGGCGCGGCAAATCTGCCGCCCGGC CACCGCTTGTGCGACGACGCTGTGCAAGTGCTGGAGATCTGTGGTTTTAC GGCCATGGACATCGCGTTCGTGGGAAGCTGGAGCTCTGTGCGTAGCGCTA GCGGCGTACCCAAGAGCAACAGGATGTGGGCCCGTGCTGTGACAGATATC AAGGCCCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9860:4544..5952-

>mRNA_S-dermatodea_contig9860.17825.1 ID=mRNA_S-dermatodea_contig9860.17825.1|Name=mRNA_S-dermatodea_contig9860.17825.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2466bp|location=Sequence derived from alignment at S-dermatodea_contig9860:4544..5952- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATATCGACTGTGGTAGAAGGGGTTGCGACGGGAATTATCGAAAGCGGTGC
GGCCACGCCATTCGTGGCTCCTCTCTGCGTAGCCCTGGTCAAGGCCAAGG
GCATCGTAGATGGGGCCAGTCGCAACAAGGAGGAGCTGGCGGAGCTGTGC
GAGCTGTGCGACTTGATCGCGGTGCAGGTGATCGACAAGGCCAAGGCTTC
GAATACCTCGACGATCGATGTAGCCCCCCTCCAAAAGTGTGTCGATAAGC
TCGAAGAGGTGGCCGAACGCTACCACGATCAAGGGCGCTTGGCCAGGATG
GCGCAATTTCGCAGAGACGGCGACGACATCCGGAGGCTTCGCGCCCGCAT
CGAGGCCGTCGTTCCAATCATGGGGCTCGCGGGCGTGGTGAACATCGGGG
AGAAATTGGACCAAATTTTGATATCGACTGTGGTAGAAGGGGTTGCGACG
GGAATTATCGAAAGCGGTGCGGCCACGCCATTCGTGGCTCCTCTCTGCGT
AGCCCTGGTCAAGGCCAAGGGCATCGTAGATGGGGCCAGTCGCAACAAGG
AGGAGCTGGCGGAGCTGTGCGAGCTGTGCGACTTGATCGCGGTGCAGGTG
ATCGACAAGGCCAAGGCTTCGAATACCTCGACGATCGATGTAGCCCCCCT
CCAAAAGTGTGTCGATAAGCTCGAAGAGGTGGCCGAACGCTACCACGATC
AAGGGCGCTTGGCCAGGATGGCGCAATTTCGCAGAGACGGCGACGACATC
CGGAGGCTTCGCGCCCGCATCGAGGCCGTCGTTCCAATCATGGGGCTCGC
GGGCGTGGTGAACATCGGGGAGAAATTGGACCAAATTTTGGCTCGTCTGC
AGCCGCGACCCAAGCTGGCGTCGGTGCCTCCGGGAGTACCGATGGGGCAG
TCGTGGTACACCGTGCGCGATGGGGTGGTGGACAGAGTGTGCGATATCCT
CGGTGGGGACGGAGGGCCAGTGGTTGCGGCACTGACGGGACGGAGCGGGG
CGGGCAAAACCACCGCCGCCGCCGCCATGGTGGGAGAGCGGCAGGGCCCT
ATCCGCCCGCGCACTGGTGAGACCGAGGACCAGGCGCGTACCCGCCTGGA
TCGCGTGAGGGCGCGCTTTTCCGACGGCGTGGTGTGGCTGCGGGTGGGCA
AGGGGGCAGGGGGCGCAGACCGCTTACCTCCTCTAATGCGCAAGTTGGCC
AAGACGCTTCACGAGCACGTGATGAAATCACATGTCGATGCTCCGGAGGT
GGGTGAGGAAGGTGAGAGCTACGTGAAAAAGATCGTGGAACTAACGAAGA
AGCGGTGCCTTGTGGTGGCCGACGATGTGTGGGAGGAAGAAGTGGTCGAG
AAGCTGAGAGAGACGGGCATGTGGGTGCTCTTGACCACGCGATTCCCCGT
GATGGTGAAACCTGGTGAGCGGGTGTTCGTCGACAAACTTGGGGAGACGG
AGGCGGAGAACGTGCTGCGCGGCGCGGCAAATCTGCCGCCCGGCCACCGC
TTGTGCGACGACGCTGTGCAAGTGCTGGAGATCTGTGGTTTTACGGCCAT
GGACATCGCGTTCGTGGGAAGCTGGAGCTCTGTGCGTAGCGCTAGCGGCG
TACCCAAGAGCAACAGGATGTGGGCCCGTGCTGTGACAGATATCAAGGCC
CAGGCTCGTCTGCAGCCGCGACCCAAGCTGGCGTCGGTGCCTCCGGGAGT
ACCGATGGGGCAGTCGTGGTACACCGTGCGCGATGGGGTGGTGGACAGAG
TGTGCGATATCCTCGGTGGGGACGGAGGGCCAGTGGTTGCGGCACTGACG
GGACGGAGCGGGGCGGGCAAAACCACCGCCGCCGCCGCCATGGTGGGAGA
GCGGCAGGGCCCTATCCGCCCGCGCACTGGTGAGACCGAGGACCAGGCGC
GTACCCGCCTGGATCGCGTGAGGGCGCGCTTTTCCGACGGCGTGGTGTGG
CTGCGGGTGGGCAAGGGGGCAGGGGGCGCAGACCGCTTACCTCCTCTAAT
GCGCAAGTTGGCCAAGACGCTTCACGAGCACGTGATGAAATCACATGTCG
ATGCTCCGGAGGTGGGTGAGGAAGGTGAGAGCTACGTGAAAAAGATCGTG
GAACTAACGAAGAAGCGGTGCCTTGTGGTGGCCGACGATGTGTGGGAGGA
AGAAGTGGTCGAGAAGCTGAGAGAGACGGGCATGTGGGTGCTCTTGACCA
CGCGATTCCCCGTGATGGTGAAACCTGGTGAGCGGGTGTTCGTCGACAAA
CTTGGGGAGACGGAGGCGGAGAACGTGCTGCGCGGCGCGGCAAATCTGCC
GCCCGGCCACCGCTTGTGCGACGACGCTGTGCAAGTGCTGGAGATCTGTG
GTTTTACGGCCATGGACATCGCGTTCGTGGGAAGCTGGAGCTCTGTGCGT
AGCGCTAGCGGCGTACCCAAGAGCAACAGGATGTGGGCCCGTGCTGTGAC
AGATATCAAGGCCCAG
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