mRNA_S-dermatodea_contig9840.17815.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: D8LM53_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM53_ECTSI) HSP 1 Score: 297 bits (760), Expect = 1.050e-100 Identity = 144/173 (83.24%), Postives = 155/173 (89.60%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERATRENSFWKAYDIPKLVETLPGAEAARDKVVSLRATYASLSELYQESKTGAD-TRIPLA 516
EAVKKGNKVFGAAILKLSDLS+VV GTNTEIE PLWHGEVACIKNFW LP EGRPLPSECLMLATHEPCSMC+SAITWSAF E+HFLFSMEDSRDAFNIPHDLRI++EVF+ ERATREN FWKAYD+PK+VETLP A +KV LR TYASLSELYQ+SK GA TRIPL+
Sbjct: 29 EAVKKGNKVFGAAILKLSDLSLVVAGTNTEIECPLWHGEVACIKNFWNLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIYQEVFKCERATRENKFWKAYDLPKVVETLPENGALGEKVTMLRETYASLSELYQDSKGGASSTRIPLS 201
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A1H4JNY7_9HYPH (tRNA(Arg) A34 adenosine deaminase TadA n=10 Tax=Proteobacteria TaxID=1224 RepID=A0A1H4JNY7_9HYPH) HSP 1 Score: 202 bits (513), Expect = 3.490e-63 Identity = 98/173 (56.65%), Postives = 127/173 (73.41%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAARDKVVSLRATYASLSELYQESKTGADTRIPL 513
E V GNK+FGAAILK SDLS+V+ TN E+E+PLWHGEV +K F+ELP E RP ++C+ L+THEPCS+C+SAITW+ F ++LFS EDSRDAF IPHDL+I +EVF E EN+FWK+Y +P L LP AEA + ++ +L A YA+LS+ YQ+SK A+ IPL
Sbjct: 26 EGVAHGNKLFGAAILKKSDLSLVLAETNNELENPLWHGEVHTLKRFYELPKEERPDTTDCIFLSTHEPCSLCLSAITWTGFDNFYYLFSHEDSRDAFAIPHDLKILKEVFTLEPGGYNAENAFWKSYALPALATALPEAEALKARIATLAAAYAALSQRYQDSK--AENDIPL 196
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: K2PN27_9HYPH (Zinc-binding CMP/dCMP deaminase n=1 Tax=Nitratireductor indicus C115 TaxID=1231190 RepID=K2PN27_9HYPH) HSP 1 Score: 199 bits (507), Expect = 2.850e-62 Identity = 99/175 (56.57%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEA--ARDKVVSLRATYASLSELYQESKTGADTRIPL 513
E V GNK+FGAAIL+ DLS+V+ TN E+E+PLWHGEV +K F+E+P RP S+C+ L+THEPCS+C+SAITW+ F H+LFS EDSRD+F IPHDL+I +EVF E EN+FWK+Y IP L TLP AEA A ++ ++ A YA LS+ YQESK G D IPL
Sbjct: 24 EGVAHGNKLFGAAILRRDDLSLVLAETNNELENPLWHGEVHALKRFYEMPKTSRPDTSDCIFLSTHEPCSLCLSAITWTGFDNFHYLFSHEDSRDSFAIPHDLKILKEVFTLEPGGYNAENAFWKSYAIPALARTLPEAEARVALARIEAIGAAYAELSDAYQESKAGND--IPL 196
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: P74236_SYNY3 (Slr1161 protein n=3 Tax=Synechocystis TaxID=1142 RepID=P74236_SYNY3) HSP 1 Score: 196 bits (497), Expect = 1.000e-60 Identity = 95/175 (54.29%), Postives = 126/175 (72.00%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGA--EAARDKVVSLRATYASLSELYQESKTGADTRIPL 513
E VK GNK+FGAAILK DLS +V TNTE E+PLWHGEV +K +ELP + RP P +C+ LATHEPCS+C+SAITW + ++LFS EDSRD+FNIPHDLRI +EVF+ E + +N +WK++D+ KLV+ G + D++ +L+A YA +S++YQ SK AD IPL
Sbjct: 26 EGVKAGNKLFGAAILKKEDLSTLVSSTNTETENPLWHGEVHTMKKLYELPRKKRPNPRDCIFLATHEPCSLCLSAITWGGYDNFYYLFSFEDSRDSFNIPHDLRILKEVFKVENGDYSHDNYYWKSHDLVKLVDGYQGELKRSFLDRIENLKAVYAEMSDVYQSSKGDAD--IPL 198
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A7V6ZKW7_9HYPH (Nucleoside deaminase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7V6ZKW7_9HYPH) HSP 1 Score: 194 bits (492), Expect = 5.390e-60 Identity = 98/176 (55.68%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAARDKV--VSLRATYASLSELYQESKTGADTRIPLA 516
E V +GNK+FGAAIL+ SDLSVVV +N E E+PLWHGEV +K F+ELP RP P +CL LATHEPCS+C+SAITW+ + +FLFS EDSRD+F IPHDLRI +EVF+ + EN++WK+Y I K++ TLP AE AR + ++ Y LS +YQ SK D IPLA
Sbjct: 24 EGVARGNKLFGAAILRKSDLSVVVAESNNETENPLWHGEVHALKRFYELPKADRPDPKDCLFLATHEPCSLCLSAITWTGYDNFYFLFSHEDSRDSFAIPHDLRILKEVFRLDPGGYAAENAYWKSYSIRKVMRTLPDAEQARLEARRAAIARRYDELSSVYQASKD--DNDIPLA 197
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: K2N1Z2_9HYPH (Zinc-binding CMP/dCMP deaminase n=1 Tax=Nitratireductor pacificus pht-3B TaxID=391937 RepID=K2N1Z2_9HYPH) HSP 1 Score: 193 bits (490), Expect = 1.160e-59 Identity = 92/173 (53.18%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 7 VKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEA--ARDKVVSLRATYASLSELYQESKTGADTRIPL 513
V++GNK+FGAAIL+ SDLS+V+ TN E+E+PLWHGE+ +K F+ELP RP +C+ L+THEPCS+C+SAITW+ F H+LFS EDSRD+F IPHDLRI +EVF + EN+FWK+Y +P L LP A+A A ++ +L+A Y LS +YQ+ K A+ IPL
Sbjct: 28 VERGNKLFGAAILRKSDLSLVIAETNNELENPLWHGEMHALKRFYELPQASRPDTKDCIFLSTHEPCSLCLSAITWTGFDNFHYLFSHEDSRDSFAIPHDLRILKEVFTLDAGGYNAENAFWKSYSLPALAAALPEADALAASARIAALKAAYDGLSGIYQQGK--AENSIPL 198
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A2P8NCW5_9HYPH (tRNA-specific adenosine deaminase n=2 Tax=Nitratireductor TaxID=245876 RepID=A0A2P8NCW5_9HYPH) HSP 1 Score: 192 bits (489), Expect = 1.540e-59 Identity = 97/173 (56.07%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 7 VKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAA--RDKVVSLRATYASLSELYQESKTGADTRIPL 513
V+ GNK+FGAAILK SDLSVVV TN EIE+PLWHGEV +K F+ELP E RP +C+ +ATHEPCS+C+SAITW+ F +FLFS EDSRD+F IPHDL+I +EVF+ + +N++W Y I +LVE LP AE A ++++ ++ A Y +LS YQ SK G D IPL
Sbjct: 26 VEAGNKLFGAAILKKSDLSVVVAETNNEIENPLWHGEVHALKRFYELPHERRPDTGDCIFVATHEPCSLCLSAITWTGFDNFYFLFSHEDSRDSFAIPHDLKILKEVFRLDPGGYNAKNAYWTGYAIRRLVEALPEAERAGSQNRIATIAAGYDALSAAYQSSKAGND--IPL 196
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A256FSF7_9HYPH (Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=14 Tax=Brucella/Ochrobactrum group TaxID=2826938 RepID=A0A256FSF7_9HYPH) HSP 1 Score: 191 bits (485), Expect = 5.310e-59 Identity = 94/176 (53.41%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAAR--DKVVSLRATYASLSELYQESKTGADTRIPLA 516
+ V +GNKVFGAA+L+ SDLS+V+ TN E E+PLWHGEV +K F+E+P +GRP + L+THEPCSMC+SAITWS F ++LFS EDSRDAF+IPHDL+I +EVF E R+NSFW ++ IPK+V +LP + AR +++ ++RA Y ++S YQ SK G IPL+
Sbjct: 19 QGVAEGNKVFGAALLRKSDLSLVLAETNNETENPLWHGEVHTLKRFYEMPEQGRPDTKNMVFLSTHEPCSMCLSAITWSGFDNFYYLFSHEDSRDAFSIPHDLKILKEVFTLEPGGYNRDNSFWHSHSIPKMVASLPEPDRARLENRLEAIRAKYDAMSGTYQSSKDG--NAIPLS 192
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A432V5I9_9HYPH (Nucleoside deaminase n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V5I9_9HYPH) HSP 1 Score: 190 bits (482), Expect = 1.780e-58 Identity = 95/175 (54.29%), Postives = 123/175 (70.29%), Query Frame = 1
Query: 1 EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAAR--DKVVSLRATYASLSELYQESKTGADTRIPL 513
E V KGNK+FGAAIL+ SDLS+V+ TN EIE+PLWHGEV C+K F+E+P RP +C+ LATHEPCS+C+SAITWS F ++LFS EDSRD+F IPHDL+I +EVF E +N++WK+Y + L+ LP AE R ++ ++ ATY LS YQ+ K AD IPL
Sbjct: 24 EGVAKGNKLFGAAILRKSDLSLVLAETNNEIENPLWHGEVHCLKCFYEMPKADRPDTRDCIFLATHEPCSLCLSAITWSGFDNFYYLFSHEDSRDSFAIPHDLKILKEVFTLEPGGYNAQNAYWKSYSLRGLLRDLPQAERQRLETRLTAISATYDDLSSHYQDGK--ADDDIPL 196
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Match: A0A522RF37_9HYPH (Nucleoside deaminase n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A522RF37_9HYPH) HSP 1 Score: 189 bits (480), Expect = 3.350e-58 Identity = 93/172 (54.07%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 7 VKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPAEGRPLPSECLMLATHEPCSMCISAITWSAFPEVHFLFSMEDSRDAFNIPHDLRIFREVFQSERA--TRENSFWKAYDIPKLVETLPGAEAARDKVVSLRATYASLSELYQESKTGADTRIPLA 516
VKKGNK+FGAAIL+ SDLS+VV TN E E+PLWHGEV +K F+ELP RP +C+ LATHEPCS+C+SAITW+ F ++LFS EDSRD+F IPHDLRI +EVF+ + EN++WK++ + KL P +E ++ L Y LSE YQ K G D IPLA
Sbjct: 26 VKKGNKLFGAAILRKSDLSIVVAETNNETENPLWHGEVHALKRFYELPKADRPETKDCIFLATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSFAIPHDLRILKEVFRLDPGGYNAENAYWKSFALCKLARETPDSERLGKRIDRLSLLYEELSETYQSGKGGND--IPLA 195 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9840.17815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9840.17815.1 >prot_S-dermatodea_contig9840.17815.1 ID=prot_S-dermatodea_contig9840.17815.1|Name=mRNA_S-dermatodea_contig9840.17815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp EAVKKGNKVFGAAILKLSDLSVVVVGTNTEIESPLWHGEVACIKNFWELPback to top mRNA from alignment at S-dermatodea_contig9840:1109..3143- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9840.17815.1 ID=mRNA_S-dermatodea_contig9840.17815.1|Name=mRNA_S-dermatodea_contig9840.17815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2035bp|location=Sequence derived from alignment at S-dermatodea_contig9840:1109..3143- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9840:1109..3143- >mRNA_S-dermatodea_contig9840.17815.1 ID=mRNA_S-dermatodea_contig9840.17815.1|Name=mRNA_S-dermatodea_contig9840.17815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at S-dermatodea_contig9840:1109..3143- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |