mRNA_S-dermatodea_contig984.17813.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig984.17813.1
Unique NamemRNA_S-dermatodea_contig984.17813.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: D7G767_ECTSI (Selenoprotein T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.760e-83
Identity = 161/304 (52.96%), Postives = 199/304 (65.46%), Query Frame = 1 
Query:   52 AQTPQEGGRKGLSVGYRLLVMAIIYVFIRRYVGDGTVPAKKAAASTDSTPPETAL---ELAVAPLKKETPLAESS--RPVLSGFDEEDEFAGLGELTKGY----------DPDQSAAQAVLRMPVDTPFEGADVSLGDRT---------HVPEVLVQFCMS*GMRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLRSAKS 891
            A  P  G R G+S   R+L++AI+Y+FI+RYVGDG   A K+ A++D  P   A    E+ VAPL +  P    +  RP +   D EDEFAG+G  TK            D  +SAAQ +        F G   SLG  T          VP+VLVQFC+S GMRRNFEELRSFLH HYP L +A SIRGELYPPPPMA A+A+ GS+ Q+GG+A  L GSLIFD+LGVP PF V V+R+NP+ TIVG+TV NSFC S L T AFEVSIDGELVFSRL  +G+FP+G L+++  E+RGLRS +S
Sbjct:    8 AGQPPGGERNGMSFSNRMLLLAILYLFIKRYVGDGA--AGKSPATSDKPPAGAASGAREVPVAPLAEIVPTKHMNHARPAID--DPEDEFAGMGGSTKNTGGGSLGSSNRDDARSAAQQLAVADSSVEF-GGTASLGAVTGAGAVGSGGDVPQVLVQFCVSXGMRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRS 306
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S2D3C0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3C0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.430e-25
Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGL 876
            M+RNF ELR+FL   YP L+    I GE YPPPP A+   SA   +QMGG+ + + GS IF+ LG+P+P     L++N +    G+  +NS  +S   T AFEV +DGE+V+S+LE  G+ P+G  +++ +E++G+
Sbjct:    1 MKRNFVELRNFLAHRYPELQ--GKIAGENYPPPPYANLAVSAAGTVQMGGIVLMMFGSQIFNTLGMPEPEWYKELQENKMMAFCGVFFMNSMANSLTTTGAFEVLLDGEVVYSKLET-GRMPNGRQLIELMEQKGI 133
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S2V5G7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 6.320e-25
Identity = 96/287 (33.45%), Postives = 142/287 (49.48%), Query Frame = 1 
Query:  100 RLLVMAIIYVFIRRYVGD---GTVP---AKKAAASTDS-TPPETALELAVAPLKKETPLAESSRPV--LSGFDE-EDEFAGLGELTKGYDPDQSAAQAVLRMP---------VDTPFEGADV----SLGDRTH----VPEVLVQFCMS*GMRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLR 879
            R L++ II V +  YV D   G  P   AK   AS +S TPP+   +  +     +TPL++ +R +  +  F E EDEFA +  L      D+    A    P         +D  F   D     S G+        P+V+V++C    M++NFEE++ FL   YP L    SI G+ YP P     I+  GS L +  L   +GGS +F K+G+P+P  +   + N ++  +GI  +N   S+  KT AFEV +D +L+FS+LE   KFPS   +   L + GLR
Sbjct:    3 RPLIVTIIVVLVIVYVRDSYWGQPPPKVAKNPGASVESPTPPKQQHKSTI-----QTPLSQKARTLDDIEVFGEAEDEFADVPSLE-----DEDGVNAAGTFPKSSSNIPNDIDDEFGTEDEFDAGSSGNEPFSNRVAPQVIVKYCPQSNMKKNFEEMQQFLEYRYPQL--VGSIHGQNYPLPFHIKVISKIGSSLHLLSLVFLMGGSFVFQKMGIPEPSWLDWAKNNRMQVFIGIFGINYVTSNMAKTGAFEVFLDDDLIFSKLEMN-KFPSVQDLQVGLAQFGLR 276
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: F0YLT9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLT9_AURAN)

HSP 1 Score: 92.8 bits (229), Expect = 3.130e-18
Identity = 51/147 (34.69%), Postives = 78/147 (53.06%), Query Frame = 1 
Query:  436 EVLVQFCMS*GMRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGL 876
            EVLV+ C S G +RN+ ELR FL   YP LR   S+  E YPPP +    A A    Q+  +A+ LGG  +F   G   P     + +N +     + + N+  +  + T AFE+ ++GEL FS+LE  G+ PS   +++ ++  G 
Sbjct:   23 EVLVKLCTSXGTQRNYLELRKFLEDAYPGLR---SVAAEQYPPPAVGVFAAQAAGMAQVACVALLLGGEKVFQLFGAATPGWYHSVAENKMMAFGAVWMANNVAAQMVATGAFEIHVNGELAFSKLET-GRLPSAADVVRGMKRAGF 165
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A6S9L5H0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L5H0_HETAK)

HSP 1 Score: 90.1 bits (222), Expect = 1.180e-17
Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQP-FLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPS 837
            M+RNF EL+ FL   YP L    +++G  YPPPP A A+A+ G+    GG+A+   G  +F  +G+  P      ++ NP+  + G+  +N+    F KT AFEV ++GE VFS+LE  G+FP+
Sbjct:    1 MQRNFIELQKFLEYSYPEL--VGNVQGTFYPPPPFALALANLGTLALWGGIALTFLGETLFRAVGLAAPPGWFQSMKANPMPVVGGLFALNAVAGGFAKTGAFEVYLNGETVFSKLES-GRFPN 121
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S1BN41_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN41_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.420e-14
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKL----GVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERG 873
            MRRNF ELR FL  +YP +   ++I G   PPP  A   A     LQ+  +A A  G  +++ +    G P P+   ++ +N V  +  +  VNS  +S L T AFE+ +DG+++FS++E  G+ P+G  I+KALE  G
Sbjct:    1 MRRNFLELRRFLLQNYPHVFSEENISGGTQPPPSNAMYFAQVTGTLQLIAVAFAFFGDSLWNIVPIWGGRPPPWW-GIVLENKVAVMCFLFCVNSMANSQLSTGAFEIDMDGKIIFSKMEA-GRMPNGDDIVKALEGMG 137
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S1ZVC8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZVC8_TRICV)

HSP 1 Score: 75.5 bits (184), Expect = 1.340e-12
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKL----GVPQPFLVSVLRQNPVRTIVG-ITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLRS 882
            M RNF ELR +L   YP LR    I GE YP PP A A A+  S  Q+  +A    G  +++ +    G P  +    +++N    ++G   VV +    ++ T AFE+ +DG++VFS+LE  G+FP+G  IM+ +   G+++
Sbjct:    1 MARNFMELRKYLEGSYPELR--GRITGENYPIPPAAAAFANFVSIAQVFLMATVFMGDAVWNYVPFFSGPPDWYF--AMKENSAVVVIGAFLVVPTIAQKYVTTGAFEIILDGQVVFSKLEL-GRFPNGNDIMEIMTNAGMKA 138
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S2XS90_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS90_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.470e-12
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKLGVPQ--PFLVSVLRQNPVRTIVGI-TVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLRSAK 888
            M RNF +L+ FL  H+P L    +I+G  YP P  A   + A  F+Q+  +     G  I++ +   Q  P     ++QN     +GI  ++ S   S++ T AFEV +DG +++S+L   G+ P+G  ++K L + GLR  K
Sbjct:    1 MSRNFHQLKEFLEQHFPELANG-AIKGANYPAPAWATIASQAIMFMQVFTMMAVFTGDAIWNYIPFVQGAPSWYYSMKQNSAVVFIGIFLIIPSVIQSYITTGAFEVMLDGAVIYSKLAT-GRMPNGNDLLKPLIQAGLRDVK 141
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: B8BVA3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVA3_THAPS)

HSP 1 Score: 73.9 bits (180), Expect = 4.730e-12
Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKL-----GVPQPFLVSVLRQNPVRTIVGI-TVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLRSAK 888
            M+ NF  +R  L   +P   Q  SI GE YP P       S  S LQ+ G+ + + G  I+  +     G P+ +    L+ NP   ++G+  ++ S+  SF  T AFE+ +DG+++FS+LE  G+ P+   I+KA+E  GL   +
Sbjct:    1 MKANFLRVREILINEFPG--QWSSIEGENYPAPEWTKLAGSVVSALQIFGMVLVMVGDSIWSYIPGFRRGPPEVYY--KLKDNPALALIGVFLIIPSYIQSFANTGAFEIMLDGKVIFSKLEL-GRMPNVAEIIKAVESAGLHRGR 141
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BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Match: A0A7S2PKB4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKB4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.970e-11
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 1 
Query:  469 MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGGLAMALGGSLIFDKL----GVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTDAFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGL 876
            M RN+ +LR FL  ++P L    +I G  YPPP  A  ++     LQ+  +A    G  I+  +    G P  +   V ++NP+  +  + + NS  +S   T AFEV +DG +VFS+LE  G+ PSG  I++  +  GL
Sbjct:    1 MSRNYVQLRQFLEQNFPELE--GNIHGSNYPPPEFAVYLSQLIGILQIFAMAAVFMGDAIWQFVPFMNGQPPGWWPQV-KENPMLVVCTLFMGNSIANSMTTTGAFEVLLDGVVVFSKLET-GRMPSGPEILQVFKGAGL 136
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig984.17813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G767_ECTSI1.760e-8352.96Selenoprotein T n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S2D3C0_9STRA1.430e-2542.65Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2V5G7_9STRA6.320e-2533.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YLT9_AURAN3.130e-1834.69Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6S9L5H0_HETAK1.180e-1739.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1BN41_9STRA1.420e-1437.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1ZVC8_TRICV1.340e-1234.97Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2XS90_9STRA3.470e-1232.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8BVA3_THAPS4.730e-1232.88Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PKB4_9STRA4.970e-1134.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig984contigS-dermatodea_contig984:13369..19022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.8
Seed ortholog evalue5.5e-50
Seed eggNOG ortholog2880.D7G767
Preferred nameSELENOT
KEGG koko:K22366
GOsGO:0001514,GO:0001678,GO:0002790,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0007154,GO:0007204,GO:0007267,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008430,GO:0009058,GO:0009059,GO:0009306,GO:0009636,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009914,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0015031,GO:0015036,GO:0015833,GO:0016020,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019222,GO:0019538,GO:0019725,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030003,GO:0030072,GO:0030073,GO:0031016,GO:0031323,GO:0031326,GO:0031984,GO:0032268,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0033500,GO:0034248,GO:0034284,GO:0034641,GO:0034645,GO:0035773,GO:0042175,GO:0042221,GO:0042592,GO:0042593,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045454,GO:0046879,GO:0046883,GO:0046887,GO:0046903,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051179,GO:0051234,GO:0051246,GO:0051480,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055114,GO:0060123,GO:0060124,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071702,GO:0071704,GO:0071705,GO:0072503,GO:0072507,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0097237,GO:0098754,GO:0098771,GO:0098827,GO:0098869,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1903530,GO:1903532,GO:1990748,GO:2000112
EggNOG free text desc.thioredoxin-disulfide reductase activity
EggNOG OGsKOG3286@1,KOG3286@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionselenoprotein T
Ec32 orthologEc-01_010860.1
Exons3
Model size1654
Cds size429
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig984.17813.1prot_S-dermatodea_contig984.17813.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig984 17837..18265 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925434.4462657-UTR-S-dermatodea_contig984:13368..134951622925434.4462657-UTR-S-dermatodea_contig984:13368..13495Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 13369..13495 +
1694079931.0595725-UTR-S-dermatodea_contig984:13368..134951694079931.0595725-UTR-S-dermatodea_contig984:13368..13495Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 13369..13495 +
1622925434.4617043-UTR-S-dermatodea_contig984:16403..165701622925434.4617043-UTR-S-dermatodea_contig984:16403..16570Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 16404..16570 +
1694079931.0771081-UTR-S-dermatodea_contig984:16403..165701694079931.0771081-UTR-S-dermatodea_contig984:16403..16570Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 16404..16570 +
1622925434.4722583-UTR-S-dermatodea_contig984:17662..178361622925434.4722583-UTR-S-dermatodea_contig984:17662..17836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 17663..17836 +
1694079931.0877519-UTR-S-dermatodea_contig984:17662..178361694079931.0877519-UTR-S-dermatodea_contig984:17662..17836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 17663..17836 +
1622925434.5002472-UTR-S-dermatodea_contig984:18265..190221622925434.5002472-UTR-S-dermatodea_contig984:18265..19022Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 18266..19022 +
1694079931.109324-UTR-S-dermatodea_contig984:18265..190221694079931.109324-UTR-S-dermatodea_contig984:18265..19022Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig984 18266..19022 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925434.486229-CDS-S-dermatodea_contig984:17836..182651622925434.486229-CDS-S-dermatodea_contig984:17836..18265Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig984 17837..18265 +
1694079931.0989313-CDS-S-dermatodea_contig984:17836..182651694079931.0989313-CDS-S-dermatodea_contig984:17836..18265Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig984 17837..18265 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig984.17813.1

>prot_S-dermatodea_contig984.17813.1 ID=prot_S-dermatodea_contig984.17813.1|Name=mRNA_S-dermatodea_contig984.17813.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=143bp
MRRNFEELRSFLHVHYPVLRQADSIRGELYPPPPMAHAIASAGSFLQMGG
LAMALGGSLIFDKLGVPQPFLVSVLRQNPVRTIVGITVVNSFCSSFLKTD
AFEVSIDGELVFSRLEQQGKFPSGVLIMKALEERGLRSAKSF*
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mRNA from alignment at S-dermatodea_contig984:13369..19022+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig984.17813.1 ID=mRNA_S-dermatodea_contig984.17813.1|Name=mRNA_S-dermatodea_contig984.17813.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5654bp|location=Sequence derived from alignment at S-dermatodea_contig984:13369..19022+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTATATAGTACATAGGCGGCTGACCGCTGCGGGGCCATGTCCGATAATGG
CGCGCAGACGCCTCAAGAAGGCGGGAGGAAGGGACTCAGCGTTGGGTACC
GGCTCTTGGTGATGGCGATCATATATGGTGAGTGTTCGGTGCGGGCCAAC
CTCCTGGTTGTTCGAGCGCTGTCGATCGACCGAACCTAATACCAGGACCT
TGTACATATCATGATACTGATTATACAAGGCGCACAGGTGAACTACACCT
AGATACTGCTGTAATAACTCTGTAATGTTTGCGCAAGAGTACCCCTGAAC
CAGTGTGTGCCAGTGAGTTAGGGATGCACATGGGAGCTAGATTTTTTAAT
TATAAATGGAGTCTATCTTTCGGAGTGGCGTTGATAATCAATCAGCGAGG
CTGCATTCTACTCGTATGATATCCTACCATAGATAGCATACCATCTTATA
CGATGTTTCCTGCGGATGAACTATCATATAATATCATGCCGTCACCAGTC
CTTCTGTACTCTGTACAGCCGCTTCAGTGCATTGTGCATCGTGCAGTCCA
TGTCATACCATACTCCACAGCTTTGGAAAAATACGTGGTATTATATACTA
TTAATACGTCTTTCTCCAAAGCTCCACAGCAGTAAAGTGTATGTATCATA
TAGTCAGTAATAGCTCTAGAGCCATGCTGTTCTCTTCTACGTAATACAAG
TACTGGTACAAGTATCATACTGGTATTTGGTAGAATAGAACATACGAGTC
TTCATTTCGCGATTTTCGACCTGCCACCAAACGAAGCGGGAAACGAAGGC
AAGGGTTCTTACGAAAACTCAAGAAACTGACCTTTTACGTGAAGGTATCG
TCATATCATCATATGAAATCTACACTGCTGTAGCACAGGAGTGAGGTGTA
TCTTTAAAAACTATTAAACGCATCTGCTGCCTCCACGGAACTGCCACCAT
CGCATCTCTTCAGTCAGTGTACGTTAATACTCTGGGTCGCCGACCCGGGG
TTGTTCTCTGTTTTCCCGTAGCCGATACTTCGTCGATCTTTTCGGAGGAA
TTCGCGCGTTTGGGTGGTCATGACGTATACGTAAAGCGGCTCGCCACGAC
CAGGAAACACTCACTTCTATTATTTAGCTTGGCAGCGGACAATGTAGGGC
CTGTCTTGACGATATATATAATCTGTTGTAAAATATCCCGGTGGACAGAT
GTGCTGGCAGATTCAGAAAAATGATGTGTTCGTGTCTTAGCGACAAAGAG
GCAAACATCAGAATGTGTCGATCGATGATTGGCCTAACAAGAGGAAAACC
ATAAGAGCCGCCGCTCCGGGTAGTCGTTTGTCTCGGACTCTGGCCATGCG
GCCAGTGTGGCTCGCCCGAGCATAGCCTGCCACCGGCACCGTGCGGCATC
GCTGTGACATGGTCAGGGTAGGATCGGGGGGCGAGCGCGTATCTCTGCCT
CGCCCGTACTCGTAAATTTTTTCCGCGTGTGGTTCGGCTTGGCATGACCC
CGAAATTCGAAATGCTGGTCATGGCCACATCTCAACTTCTAGCGCACTCT
CGACGATGCTGGTGCAACCATGATCACCGCTTCTTCCTACTTACGCCCCT
CGTGGCGGTGGCGTGTGAGCGCGGCGTCTACGTTGAGCTCAACTGCAGAT
ATCCACTCTGCTGCGTTGGACCGGTTTCGTTTCGGGACGTTGGCGCAACG
CGATCTCCGGAGCACCGAAGCAGGCGTTAAAAGATCTGCCGGTGATAGGA
AAAAAGGCAGCGTCGGCAATGATTTTTTTCTGTCGGGAAGTTAAGCTAGT
TGTGTAGGAGGGCTTTTGACAAATCAATTTATCAACATATTTATTGGGCA
GACTTTGTTTTGCTCGTTAAGACAGGCCCTTACCCAGACGATGTGTCGGA
CCTCGGTATGCATATCATAGTGTAAAAGGTCACGACCCAATGCCTCGAGC
ACGTGGTGATGAATATGACTCAGTGTGGACTCACTTCTTTGCTGTCTGAA
CAGCTCGTAGCCATGAGGTAAAAGAGGAACACGAGAGAGGTCCACCGAAA
GAGTGGGAGACTAACCGAGAGCTCAGCTTCTCTTGGTAAGTAACCCATTT
TTACGAGGCTACCCAAGGACTACACGTACTTGCGGAAGATGACAACACAC
CGATCTCGGGTCAATAATAATAGTACGTCAGATGTATGTACGTAGACTCA
ATATCGTCAACTGACAATACACTAGTCTACGTAGAAGCAGCGTATTCTCT
ACGACCAGGCCCACAATATAATGGGCAGAAGGCAAGTGAATCGTGGAAAA
GCTTGCGCTGACCAGGGGACAAGCCCGAGTCGAGCGCCAAGCGCAAAATA
AAAAAAGCGCGCGCGCCAGGCATTTGCCATGCCGAAGACACTCGGTCCTT
CAGGTCGTCTCCACGTTCGTCCCGTGGTCGGTACTCGTACGTTATCTGTT
TTCTCCGTTGAAGCGCCGAAACGCCGATACCTGGTCGTTTTTTCCCAAAC
ACAAACTACGCATTGACCCTGAGTCGTTTTTTGCCCGAGATGCATCGAAA
ACCTAGACGAAAAAGGGGGGTCGTTGACGGTGAGGCTATCGGATACCCCG
ATCGTAACGATAGTCTGCTGTCTTTTGCAAAGGCGTTTTCGCTGAAACCG
CCCCGAGGTGCCGCACGAGAACGCACCATTTCCATCGATGCACATTATCA
GTTTTCCGCGCGCGACGGCGCATTCCGTCCGTCCCATGCATCCGCACGAC
CCATCCGGGCCCCGAGGGAGCCCCAGGCATGACCAACTGTCCCTCGGCGG
TCCCTGTGGCCTTTTTCGTAATGGGCTTGGTGTCCTCCTTAATTGAGCGA
TGCCGCGCCAGCCGCATAAAGAGTTGCACACCGCACACTACCGTCTGTGT
ATCCAGCAATTATTTATCATTTTCCAAGCACCGCGAAGTGCACGTTCAAA
GGTACGTGTCCTATCTCCCTGATTCGTTACTGTGATTTGCATGCCGTAAC
CGCTTCTCCCTGTCCATCTCGCCGTCCGCGAGCAGTGTTCATCAGACGGT
ACGTTGGAGATGGGACGGTGCCTGCCAAGAAAGCGGCAGCATCGACAGAC
AGCACGCCCCCGGAGACTGCGCTCGAGTTGGCGGTGGCTCCTCTCAAGAA
AGAAACGCCCTTGGCCGAGAGCAGCCGACCGGTGCTTTCTGGCTTCGACG
AGGTACGTGTTTGATGCGCGCGCGACATCTATAGGGTAAAGGGCGATTGG
CCCCGGTGGCATTATCTCTGCCCGTGGGAAACCCCGCCGACCTCAAAGGG
AAACCCTGATCCAGGGAGGCTAGCTGTTTTGCTGGAGGTGATGCGTGATG
TGTAAGGTAAGGTTCATAACGTTGGCCATTTATTTTACAGTAGGATGCTT
TTTTTGAGCGCTCGCGCTGAGGCGCTCCCACAGAGGAGAGTGGGGTAAAA
TATATATTTACAAGCTACACACAATCGCCAGCCTGTGTTCGTTGGTATTG
AGCGTGCGTGCGGCAGCATCTTAAGCACGTGCCCGTGGCCGATATGAACT
AAATGTGGCAACGGCTGGCGCCCAGTGCGCTTAATCGGCAGCGTCTTGCC
ACCCTTTGCCGACGACCGAACGGCTTACTGCTTATATACTATTAATAGTC
TCACATACGTGTGCACCCTCTACATCTTGCTGCTGCCTCTGGATTCGCCG
CAAACCGCTCCCGAGTTGGCTGCCATTTCGACAAGCAGCTCGAAGCAAAC
GCAACATCCTGCCTGTCAGCTAACACACAGACCTTGTTTCGAAGGCGGCT
TACGGCAGGGAGAACTTTTTAACAAGCTTCCACGGGCGGCCGCATTTGCT
CTCATCTCGGGTAGTCTTTGCCACCGCGCCCAAAGGAAGAAGTCAGACCA
TGCGCGGTGACAGTCGGCAGAGACGCAGAAGTGTGCATGTGTATGCACAG
AGTAGCGAGGCGAATGATGCGCACGGTTTGTGCACCACGGGGTCGAAAGG
CAGGTTCGTAGTCGGCAATCCGTTTTATAGCGCTAATCTTAAACCCCTCT
TCTGGTGTGCGTGCATCATGGCCTTGCTTGCGCGAGTGTGTAAATCTCCT
TGCCAACCCGCCCGCGCGCGAGACGCGGCAATGCAGCCCATCAGTGTCAG
CTCTTGTAAGCTGTAAAGGGCACACGGGCCCAACCACCTTCCCTCCTCAT
GTTTTGTGTTCGTGTATCATTGCCGCAAAATCTCAAATCTGCGCCCGCGC
GGTTGTTTGCTTGGCATGTGTGTGTGTGTTCTGTTCGCGCGCAGGAGGAT
GAGTTCGCCGGCTTGGGCGAGTTGACCAAAGGCTACGATCCGGACCAGTC
CGCGGCTCAGGCTGTGCTGCGCATGCCCGTGGACACCCCTTTCGAAGGCG
CGGATGTCAGTCTCGGCGACCGTACGCACGTACCTGAGGTGCTGGTCCAG
TTCTGCATGTCATGAGGCATGCGGAGGAACTTTGAAGAGCTTCGATCGTT
CCTCCACGTACACTACCCCGTCCTGCGACAGGCTGACAGTATCCGGGGCG
AGCTGTACCCCCCACCGCCGATGGCCCACGCGATCGCCTCGGCGGGGTCG
TTCCTGCAGATGGGCGGCCTGGCCATGGCGCTGGGTGGCTCGCTCATCTT
CGACAAATTGGGGGTGCCCCAGCCATTTTTGGTTTCGGTGCTAAGGCAAA
ACCCCGTGCGCACGATCGTCGGGATTACCGTGGTCAACTCCTTCTGCAGC
TCGTTTTTGAAGACTGATGCGTTCGAGGTCTCGATCGACGGGGAGCTCGT
TTTCTCGCGCCTGGAGCAGCAAGGAAAGTTCCCGTCGGGCGTGCTGATTA
TGAAGGCTCTCGAGGAGCGGGGATTGCGCAGCGCGAAGAGCTTCTAGTTC
CCCTGTTCGTCGTTGCCGAACGAAAGGTAGCAGGGTCATAGTGCTCGACT
CTAGGTGTACAGCACTTACGGCGGTGCTGCGAGCCCAACATGGGTGCTGG
TCGAGGACGCCTTGCCGGGCAGGCGCGATGGCGGCTTGAAGCACCGCCAC
GCGTGTTTGTCTCGGCGAGGTGGGGTAAGAGCGGAGAGTGGAATAAGGTG
GGAGGGTTGCGAGTCCTTGGAACCTTCGAGCGTAATGACAGACAGCACGT
TGAAAGGCGCTCACACGCCCCTGTGCTGACCCGAAATGCCGAGGATTTGG
GTTCGCAACTCGCCAATCGGAACTCTCCGTCTTGTTTCCCCCCCCCCCCC
ATTCCGGTTTTGTTTTGCATTGTACTGTACGCTTGTTGCCCCACTTCTGT
TGTGGGGACATCGAAAAAGCATACGAGGTACGCCCGTTCTTTTTATTTGT
AGTAATAGCAGATTTTCATGGCCTGCCGTGGTTGTGTAGAGGGCAGTCTT
ATTTTTTGTGGTTTGAGTGCCGAAGCTCTTCTGGATCGTGCTATCGCCAC
ACACATTTATGCTATTAATTAGCGTTTTGCCATCGTGCTCTGAACAGAAA
ATAAAAGTGCCTTTCTATTTCGGTTTGGCTATCTCAACCTTTGGGCGAAA
GTTGGATCAAAGTCCCTAGAGGATATTACTTGCAGACGGCGTGAGCTACC
TTCGGCGCCGTTGATCGTTGGAGTTCTGATGGGTCACTAGCTCTTACCGA
TCGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig984:13369..19022+

>mRNA_S-dermatodea_contig984.17813.1 ID=mRNA_S-dermatodea_contig984.17813.1|Name=mRNA_S-dermatodea_contig984.17813.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at S-dermatodea_contig984:13369..19022+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGGAGGAACTTTGAAGAGCTTCGATCGTTCCTCCACGTACACTACCC
CGTCCTGCGACAGGCTGACAGTATCCGGGGCGAGCTGTACCCCCCACCGC
CGATGGCCCACGCGATCGCCTCGGCGGGGTCGTTCCTGCAGATGGGCGGC
CTGGCCATGGCGCTGGGTGGCTCGCTCATCTTCGACAAATTGGGGGTGCC
CCAGCCATTTTTGGTTTCGGTGCTAAGGCAAAACCCCGTGCGCACGATCG
TCGGGATTACCGTGGTCAACTCCTTCTGCAGCTCGTTTTTGAAGACTGAT
GCGTTCGAGGTCTCGATCGACGGGGAGCTCGTTTTCTCGCGCCTGGAGCA
GCAAGGAAAGTTCCCGTCGGGCGTGCTGATTATGAAGGCTCTCGAGGAGC
GGGGATTGCGCAGCGCGAAGAGCTTCTAGATGCGGAGGAACTTTGAAGAG
CTTCGATCGTTCCTCCACGTACACTACCCCGTCCTGCGACAGGCTGACAG
TATCCGGGGCGAGCTGTACCCCCCACCGCCGATGGCCCACGCGATCGCCT
CGGCGGGGTCGTTCCTGCAGATGGGCGGCCTGGCCATGGCGCTGGGTGGC
TCGCTCATCTTCGACAAATTGGGGGTGCCCCAGCCATTTTTGGTTTCGGT
GCTAAGGCAAAACCCCGTGCGCACGATCGTCGGGATTACCGTGGTCAACT
CCTTCTGCAGCTCGTTTTTGAAGACTGATGCGTTCGAGGTCTCGATCGAC
GGGGAGCTCGTTTTCTCGCGCCTGGAGCAGCAAGGAAAGTTCCCGTCGGG
CGTGCTGATTATGAAGGCTCTCGAGGAGCGGGGATTGCGCAGCGCGAAGA
GCTTCTAG
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