mRNA_S-dermatodea_contig98295.17802.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.950e-23 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 1
Query: 1 RDELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
RDELY LL ++RRAT E+KRAYRNKSLQMHPDKLNQRGQEVTE+DRANFQKMK AYDV
Sbjct: 19 RDELYSLLDLDRRATPAEVKRAYRNKSLQMHPDKLNQRGQEVTEQDRANFQKMKSAYDV 77
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A1E7FJY6_9STRA (J domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJY6_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.430e-14 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 13 YQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
YQLL +ER AT EIK+AY+ +SLQMHPDKL QRG+ VTEE +A F +MK AY++
Sbjct: 2 YQLLDIERDATPEEIKKAYKRQSLQMHPDKLAQRGEVVTEELQAKFTRMKEAYEI 56
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S2RGW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGW1_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.940e-13 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 RDELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
++ Y LL VE+ AT EIKRAY+ +SLQMHPDKL Q+G+ VTE D+A F +MK AY+V
Sbjct: 5 KENFYDLLGVEKDATQDEIKRAYKRQSLQMHPDKLAQKGRTVTEVDQARFTRMKEAYEV 63
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S1YWS1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWS1_TRICV) HSP 1 Score: 70.5 bits (171), Expect = 1.120e-12 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 4 DELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
+ Y LL VE AT E+KRAY+ +SL+MHPDKL QRG+EVT ED+A F +MK AY+V
Sbjct: 25 ENFYDLLGVENDATPEELKRAYKRRSLEMHPDKLAQRGREVTPEDQARFTRMKEAYEV 82
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S4UY41_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UY41_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.110e-12 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 4 DELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
++ Y+LL +E A+ EIKRAY+ +SLQMHPDKL QRG++VTE D+A F +MK AY+V
Sbjct: 24 EDFYELLGLEHDASPEEIKRAYKRQSLQMHPDKLAQRGKQVTEADQARFTRMKEAYEV 81
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S0BVJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVJ0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.670e-12 Identity = 30/57 (52.63%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 7 ELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
+ Y++L ++ + EIKRAY+ +SL MHPDKL Q+GQ VT++D+A FQ+MK AY+V
Sbjct: 30 DFYEMLMIDNDVSQDEIKRAYKRQSLMMHPDKLAQKGQAVTDDDQARFQRMKDAYEV 86
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A448ZRQ1_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ1_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-11 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 13 YQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYD 174
Y LL VE AT +IKRAY+ +SLQMHPDKL QRG+ VT+EDRA F +MK AY+
Sbjct: 30 YGLLGVESDATPDQIKRAYKRRSLQMHPDKLAQRGKPVTDEDRARFTRMKDAYE 83
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S2M6Z8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6Z8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.560e-11 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 4 DELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
+ Y LL+V++ AT E+KRAY+ +SLQMHPDKL Q+G+ VT EDR F +M+ AY+V
Sbjct: 24 ESFYDLLSVDKHATQDELKRAYKRQSLQMHPDKLAQKGKSVTAEDRDRFTRMRHAYEV 81
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7S4JN11_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN11_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.510e-11 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 4 DELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
+ Y +L ++ AT EIK+AY+ +SL+MHPDKL QRG+EVT ED+A F +MK AY++
Sbjct: 26 ETFYSILGIDDDATPEEIKKAYKRRSLEMHPDKLAQRGKEVTPEDQARFTRMKEAYEI 83
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Match: A0A7R9ZE87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE87_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.750e-11 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 4 DELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFQKMKGAYDV 177
+ Y LL V+ AT EIK+AY+ +SL MHPDKL QRG+EVT ED+ F +MK AY++
Sbjct: 26 ENFYTLLGVDADATPDEIKKAYKRRSLVMHPDKLAQRGKEVTPEDQERFTRMKEAYEI 83 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig98295.17802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig98295.17802.1 >prot_S-dermatodea_contig98295.17802.1 ID=prot_S-dermatodea_contig98295.17802.1|Name=mRNA_S-dermatodea_contig98295.17802.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=63bp RDELYQLLAVERRATAVEIKRAYRNKSLQMHPDKLNQRGQEVTEEDRANFback to top mRNA from alignment at S-dermatodea_contig98295:117..305+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig98295.17802.1 ID=mRNA_S-dermatodea_contig98295.17802.1|Name=mRNA_S-dermatodea_contig98295.17802.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at S-dermatodea_contig98295:117..305+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig98295:117..305+ >mRNA_S-dermatodea_contig98295.17802.1 ID=mRNA_S-dermatodea_contig98295.17802.1|Name=mRNA_S-dermatodea_contig98295.17802.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at S-dermatodea_contig98295:117..305+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |