mRNA_S-dermatodea_contig9829.17801.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: B7ZGN1_9PHAE (Peroxyredoxin n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN1_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.760e-71 Identity = 115/137 (83.94%), Postives = 129/137 (94.16%), Query Frame = 1
Query: 4 DVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
DVPA+++FAGKKVVICGVPGAFTPTC+DDHLPSFIALA +FKAKGVDT+AC++VNDAFVMSRWIKSLDA+DKVTMLADGGGVFAEESGL VKTGKFGG RLQRLAMIV+DGT+ KLF E GTGYT+ S+GA VL+AL
Sbjct: 25 DVPAADVFAGKKVVICGVPGAFTPTCSDDHLPSFIALADEFKAKGVDTVACLSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDLSSGAGVLAAL 161
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: D8LG20_ECTSI (Peroxyredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG20_ECTSI) HSP 1 Score: 228 bits (580), Expect = 9.720e-68 Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1
Query: 4 DVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
DVPASEIFAGKKVVICGVPGAFTPTC+D+HLPSFIA A FK KGVDT+ACM+VNDAFVMSRWIKSLDA DKVTMLADGG VFAEESGL VKTGKFGG RLQRLAMIV+DGT+ KLF E GTGYT+ S+G +VL+AL
Sbjct: 69 DVPASEIFAGKKVVICGVPGAFTPTCDDNHLPSFIANADKFKEKGVDTVACMSVNDAFVMSRWIKSLDAEDKVTMLADGGAVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDVSSGDTVLAAL 205
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A7S2UXP0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP0_9STRA) HSP 1 Score: 173 bits (438), Expect = 4.460e-47 Identity = 81/138 (58.70%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 1 QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
++PASE+FAGKKV ICG+PGAFTPTC++ HLP FI +A D KAKGVDT+ C++VND FVM W K L A DKVTMLADGG FA+ +GL+ TG FGG RL+RL+M+VDDG + KL E G+ +T+ S+ ++L +
Sbjct: 60 SELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLLGQI 197
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A7S2UXL6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXL6_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.050e-47 Identity = 81/138 (58.70%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 1 QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
++PASE+FAGKKV ICG+PGAFTPTC++ HLP FI +A D KAKGVDT+ C++VND FVM W K L A DKVTMLADGG FA+ +GL+ TG FGG RL+RL+M+VDDG + KL E G+ +T+ S+ ++L +
Sbjct: 64 SELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLLGQI 201
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A836CPD9_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD9_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.330e-44 Identity = 79/136 (58.09%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 7 VPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
V A+++FAGKKVVICGVPGA TPTC++ H+P+FI DFKAKGVDT+A ++VND FVMS W K L+ D + ML DG FA+ +GLN+ TG FGG+RL+R+AM+V+DG V KL E G G+T+ S S+L+AL
Sbjct: 65 VSAADLFAGKKVVICGVPGAMTPTCSESHVPTFINAIDDFKAKGVDTVAVISVNDPFVMSAWGKKLEVGDSIMMLGDGSAAFAKSTGLNMDTGDFGGVRLKRMAMLVNDGVVEKLGVEDGGGFTDISDAKSILAAL 200
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A836CG28_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG28_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.960e-41 Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 4 DVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
+VPA+++FAGKKV ICGVPGA TPTC++ HLP FIA + K+KGVDT+AC++VND FVM W K L+ DKV MLADGG FA+ G T FGGIRL+RLAM+V DG V KL E G + AS ++L AL
Sbjct: 25 NVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 161
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A5P1R945_9GAMM (Glutathione-dependent peroxiredoxin n=1 Tax=Neptunomonas concharum TaxID=1031538 RepID=A0A5P1R945_9GAMM) HSP 1 Score: 150 bits (380), Expect = 2.590e-39 Identity = 74/138 (53.62%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
+ +PA+E+FAGKKVV+ VPGAFTPTC+ HLP ++ LA D KAKGVD +AC++VNDAFVM W + +A D +TMLADGGG F + GL ++TG FGG+R QR AM+++DG + +L+ E + E S +VL+AL
Sbjct: 22 ETLPAAELFAGKKVVLFAVPGAFTPTCSAHHLPGYVVLADDIKAKGVDLIACLSVNDAFVMRAWGEQQNA-DAITMLADGGGAFTKAIGLEMETGDFGGLRSQRYAMVIEDGVIKQLYIEAPKQF-EVSKAEAVLAAL 157
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A8J5XPE4_DIALT (Thioredoxin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPE4_DIALT) HSP 1 Score: 151 bits (381), Expect = 5.540e-39 Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 1 QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
+ +PA ++FAGKKVV+ G+PGA TPTC++ LP FI+ A FKAKGVDT+AC++VND FVM+ W K D S V MLADGG F + +GL+ TG FGG+R R AM+V+DG V L E G + AS+ S+L AL
Sbjct: 56 KPLPAKDVFAGKKVVLFGLPGAMTPTCSEKQLPGFISQAAAFKAKGVDTIACLSVNDPFVMAAWSKDKDPSGAVLMLADGGAAFTKAAGLSFDTGNFGGVRCVRCAMVVEDGKVTALGLEKGGAFDGASSAESMLKAL 193
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A4D9D001_9STRA (Thioredoxin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D001_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.240e-37 Identity = 72/137 (52.55%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 4 DVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
D+ +++F KKVV+ GVPGAFTPTC + H P ++A+ FKAKGVD + C+A ND FV S W KSLDA DK+++LADG FA+ GL V+TG FGG+RL R + +V+DG+V KL E G GYT S +L L
Sbjct: 27 DLTGTDLFKSKKVVLFGVPGAFTPTCTNTHAPEYLAMYESFKAKGVDAIYCIASNDCFVTSAWAKSLDAGDKMSILADGDCSFAKLVGLTVETGGFGGLRLSRFSALVEDGSVKKLHLEEGGGYTGVSGAEQMLKDL 163
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Match: A0A1I2TMB7_9GAMM (Glutathione-dependent peroxiredoxin n=2 Tax=Neptunomonas qingdaonensis TaxID=1045558 RepID=A0A1I2TMB7_9GAMM) HSP 1 Score: 141 bits (355), Expect = 9.850e-36 Identity = 73/138 (52.90%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLACMAVNDAFVMSRWIKSLDASDKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVDDGTVVKLFSEGGTGYTEASTGASVLSAL 414
+ V A +FAGKKVV+ VPGAFTPTC+ HLP F+ LA + KAKGVD +AC++VND FVM W + +A +++TMLADGGG F + GL ++TG FGG+R QR AMI++DG V +L E + E S S+L+AL
Sbjct: 25 ETVMADTLFAGKKVVLFAVPGAFTPTCSAHHLPGFVVLADEIKAKGVDMIACISVNDGFVMRAWGEQQNA-EEITMLADGGGAFTKALGLEMETGDFGGMRSQRYAMIINDGVVKQLNVEAPKQF-EVSKAESILAAL 160 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9829.17801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9829.17801.1 >prot_S-dermatodea_contig9829.17801.1 ID=prot_S-dermatodea_contig9829.17801.1|Name=mRNA_S-dermatodea_contig9829.17801.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp QDVPASEIFAGKKVVICGVPGAFTPTCNDDHLPSFIALAGDFKAKGVDTLback to top mRNA from alignment at S-dermatodea_contig9829:4866..7786- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9829.17801.1 ID=mRNA_S-dermatodea_contig9829.17801.1|Name=mRNA_S-dermatodea_contig9829.17801.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2921bp|location=Sequence derived from alignment at S-dermatodea_contig9829:4866..7786- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9829:4866..7786- >mRNA_S-dermatodea_contig9829.17801.1 ID=mRNA_S-dermatodea_contig9829.17801.1|Name=mRNA_S-dermatodea_contig9829.17801.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at S-dermatodea_contig9829:4866..7786- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |