mRNA_S-dermatodea_contig9820.17794.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: D7FPY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY2_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.420e-55 Identity = 89/103 (86.41%), Postives = 94/103 (91.26%), Query Frame = -1
Query: 28 RIKVLEYCWGKPLDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 336
+ KVLEY WGKPLDGLSPPYDY+VACDCVY E LVESLVWS+A SGR TTVLVASEKREEVTYAKFRARL++DF VRQAPRRHMDKAYDHE SEVLVCKLRR
Sbjct: 145 KAKVLEYDWGKPLDGLSPPYDYIVACDCVYVERLVESLVWSMARCSGRGTTVLVASEKREEVTYAKFRARLSEDFAVRQAPRRHMDKAYDHENSEVLVCKLRR 247
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A835YRK7_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.470e-18 Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = -1
Query: 28 TRIKVLEYCWGKPLDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 339
+ KV EYCWG P+D L PYDY++ACDCVY E LVE LVWSL ++G +TTV+V + L VR + ++Y E +++L CK +R
Sbjct: 113 VKYKVQEYCWGNPVDALDAPYDYIIACDCVYVESLVEVLVWSLEQLAGASTTVVVCRHVHTSKLVDLSTSTLLTIPAVRASC---AVRSYRSEHADLLFCKRKR 213
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A2V0P2U2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2U2_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 3.050e-14 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -1
Query: 28 RIKVLEYCWGKPL------DG----LSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 336
R+ V E W +P +G +SPP+DY++A DCVY EHL+ L +L +S TT+LVA+E+R E A F + FT+++ P M + Y H ++ + K ++
Sbjct: 129 RVAVAELDWSQPSHFTGGGEGGAGVVSPPFDYILAADCVYHEHLLRHLYRALLALSDSRTTILVANERRSESVQAAFSDLFSHSFTMKRIPHSKMAEGYSHPAIQLTILKRKK 241
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A5J4Y5H2_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5H2_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.520e-13 Identity = 33/111 (29.73%), Postives = 62/111 (55.86%), Query Frame = -1
Query: 10 RIKVLEYCWG--KPLDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRRGGGTSG 336
+ V E W + ++PP+DYV+A DCVY E +VE + ++ ++ +TV+V +E R E +++F + + FT+++ PR MD + H ++L+ + R+ G
Sbjct: 129 HVTVQELDWSNLEHYATVNPPFDYVLAADCVYHEQIVEDFLRTVLAMTHSKSTVVVVNELRSEAVHSRFTSLFEQHFTIKRTPRSKMDAVHQHSAIDILILRRRKAADAGG 239
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: UPI000C872F63 (protein N-lysine methyltransferase METTL21A n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C872F63) HSP 1 Score: 70.5 bits (171), Expect = 4.290e-12 Identity = 32/103 (31.07%), Postives = 58/103 (56.31%), Query Frame = -1
Query: 31 IKVLEYCWGKP--LDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLR 333
++V+E WG + + PP+DY++A D VY+EHL+E LV ++ ++G TT+L+ E R + + +F V+ P+ MD Y H ++ + +L+
Sbjct: 124 VEVVELDWGNKDHIRSVCPPFDYIIATDVVYAEHLLEPLVETILALAGPRTTILIGYEIRSNTVHEQMTNMWKNNFEVKTIPKAKMDHKYRHPSIQLFMMELK 226
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A2K3DL47_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DL47_CHLRE) HSP 1 Score: 68.6 bits (166), Expect = 3.250e-11 Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = -1
Query: 4 IKVLEYCWGKP--LDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRRGGGTSGSG 333
++V E W KP + L PPYDY++A DC+Y E L E ++ V+ +TV+V +E R +F + +++ P MD+ Y H + + K ++ G +G+G
Sbjct: 143 VEVQELDWTKPEQVAPLHPPYDYILAADCIYHEGLTEDFHRTVMQVTNEKSTVVVCNELRSHSVQGRFMSLFTATHSIKTVPHAKMDEKYQHPNIFIYIMKKKKKGTKAGAG 254
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: E1ZD88_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD88_CHLVA) HSP 1 Score: 66.6 bits (161), Expect = 1.440e-10 Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = -1
Query: 28 TRIKVLEYCWGKPL--DGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 339
R+ L+ W P PPYD+++A DCVYSE V L+ ++ + G T +VA+E R + + F R + FT+R+ MD Y H + + + K R+
Sbjct: 128 ARVASLD--WSDPACYAAFHPPYDFILAADCVYSELAVPHLLAAVLHMGGPRTQTIVANEFRSQTVHDLFMQRFGRHFTIRKVAPNKMDANYQHPLIHIYLLKRRK 231
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A2P6TLS3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLS3_CHLSO) HSP 1 Score: 66.6 bits (161), Expect = 1.550e-10 Identity = 30/104 (28.85%), Postives = 54/104 (51.92%), Query Frame = -1
Query: 28 TRIKVLEYCWGKPLDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 339
T + L++ PPYD+++A DCVYSE V L+ ++ + G T ++ +E R + + +F A+ + FT+R+ MD Y H + + + K R+
Sbjct: 128 TSVASLDWSDRSCYADFKPPYDFILAADCVYSELAVPHLLATVLAMGGPRTQAIITNEFRSQTVHDEFMAQFGRHFTIRKVAAGKMDANYQHPLIHIYLLKRRK 231
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A0A383V9B5_TETOB (Uncharacterized protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V9B5_TETOB) HSP 1 Score: 65.5 bits (158), Expect = 3.790e-10 Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = -1
Query: 25 IKVLEYCWGKPLDGLS---PPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRRG 333
+ V E W +P + PP+DYV+A DC+Y E L+ L L ++ +T+++A+E+R E A F FT ++ P D + H E+ + K ++G
Sbjct: 102 VTVAELDWTQPAHYAALCPPPFDYVLAADCIYHETLLRHLYRVLLAITNERSTIIIANERRSESVQAAFTGLFGTAFTFKKIPLSKQDADFCHPAIELYILKKKKG 207
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Match: A8IU01_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IU01_CHLRE) HSP 1 Score: 64.7 bits (156), Expect = 4.780e-10 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = -1
Query: 28 IKVLEYCWGKP--LDGLSPPYDYVVACDCVYSEHLVESLVWSLAGVSGRTTTVLVASEKREEVTYAKFRARLAKDFTVRQAPRRHMDKAYDHEMSEVLVCKLRR 333
++V E W KP + L PPYDY++A DC+Y E L E ++ V+ +TV+V +E R +F + +++ P MD+ Y H + + K ++
Sbjct: 120 VEVQELDWTKPEQVAPLHPPYDYILAADCIYHEGLTEDFHRTVMQVTNEKSTVVVCNELRSHSVQGRFMSLFTATHSIKTVPHAKMDEKYQHPNIFIYIMKKKK 223 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9820.17794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9820.17794.1 >prot_S-dermatodea_contig9820.17794.1 ID=prot_S-dermatodea_contig9820.17794.1|Name=mRNA_S-dermatodea_contig9820.17794.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=113bp VTATASAPPPPQLAHENLGHLVVVGLVHVSPRGLADREVFGQPRPELGVRback to top mRNA from alignment at S-dermatodea_contig9820:706..1045+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9820.17794.1 ID=mRNA_S-dermatodea_contig9820.17794.1|Name=mRNA_S-dermatodea_contig9820.17794.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=340bp|location=Sequence derived from alignment at S-dermatodea_contig9820:706..1045+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9820:706..1045+ >mRNA_S-dermatodea_contig9820.17794.1 ID=mRNA_S-dermatodea_contig9820.17794.1|Name=mRNA_S-dermatodea_contig9820.17794.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at S-dermatodea_contig9820:706..1045+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |