mRNA_S-dermatodea_contig9805.17783.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: D7G7Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z8_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 1.300e-131 Identity = 239/348 (68.68%), Postives = 262/348 (75.29%), Query Frame = 1
Query: 1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEK-PAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYADTPNRDDANQNIPTQEARVEGQGH--------------GRDRRPAASMDVEMGWLGNGRIR 999
SAVCRL+GYCPQTDPLLPLMTV+ETLLF+GGLKG+GSE +AVSLGPTENQ AGTLSGGNKRKLSLAVALIG PPVLLLDEPSSGMDPGARRSMWEVISSLS SRSV++TTHSMEECEAVCDRLGIMVGGRLRC+GTSQHLKGRFGGGYSIEVRCP+ SM +VTEM+ LSPLARLDEMHP+L KFS+PA GE G P + G G ++T GLSLS AFETIE+RK ELQVWDYSI+QATLETIFMSFAK QEEE ASVPGV Y D+ D N + Q + G+ GR R P MDVEMG LG G+ R
Sbjct: 1838 SAVCRLVGYCPQTDPLLPLMTVHETLLFYGGLKGIGSEMMDDDERETALHEAAAATMSAVSLGPTENQTAGTLSGGNKRKLSLAVALIGGPPVLLLDEPSSGMDPGARRSMWEVISSLSRSRSVIVTTHSMEECEAVCDRLGIMVGGRLRCIGTSQHLKGRFGGGYSIEVRCPSESMPKVTEMVGALSPLARLDEMHPSLAKFSVPAAGE-LGDRPPARTGFGEGVTGEVATGGLSLSKAFETIESRKTELQVWDYSISQATLETIFMSFAKHQEEEVASVPGVQYTDS---DAGNVDAGEQHHGLSSGGNSHSGDGDGGGDVRQGRSRSPQL-MDVEMGRLGGGKCR 2180
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A6H5KGR1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR1_9PHAE) HSP 1 Score: 280 bits (716), Expect = 3.850e-85 Identity = 143/174 (82.18%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPA-----GRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEV 507
SAVCRL+GYCPQTDPLLPLMTV+ETLLF+GGLKG+GSE G + +AVSLGPTENQ AGTLSGGNKRKLSLAVALIG PPVLLLDEPSSGMDPGARRSMWEVISSLSASRSV+LTTHSMEECEAVCDRLGIMVGGRLRC+GTSQHLKGRFGGGYSIEV
Sbjct: 343 SAVCRLVGYCPQTDPLLPLMTVHETLLFYGGLKGIGSEGARAMMDDGEGESALYEAAAAAMSAVSLGPTENQTAGTLSGGNKRKLSLAVALIGGPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVILTTHSMEECEAVCDRLGIMVGGRLRCIGTSQHLKGRFGGGYSIEV 516
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A836CK00_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK00_9STRA) HSP 1 Score: 224 bits (572), Expect = 6.870e-67 Identity = 131/269 (48.70%), Postives = 166/269 (61.71%), Query Frame = 1
Query: 19 LGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSAS---RSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKD 816
LGYCPQ DPLL LMT ETL+ + GL+G+ + A + V L ++ AGTLSGG+KRKLSLA+AL G P V LLDEPS GMDP ++R MW VI+ L +S RS+VLTTHSMEECEA+C R+GIM G+LRCLG+ QHLK RFGG YSIE++ V ++ LS A L+E H T VK+S+PA + LSL+ AF TIEAR+ EL++ YSI+Q++LE IF+ AKD
Sbjct: 33 LGYCPQVDPLLDLMTARETLMLYAGLRGIPKGPELNAAVAATL-------SQVGLQEYADRRAGTLSGGSKRKLSLAIALTGQPAVALLDEPSCGMDPVSKRRMWNVIAGLRSSGRTRSIVLTTHSMEECEALCTRVGIMRDGQLRCLGSCQHLKSRFGGSYSIELQFKEGFAEGVKALVPELSRDAVLEEEHETSVKYSVPARSQ------------------------LSLADAFGTIEARRQELEIVTYSISQSSLEQIFVGIAKD 270
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S2FHN6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FHN6_9EUKA) HSP 1 Score: 221 bits (563), Expect = 3.130e-65 Identity = 120/264 (45.45%), Postives = 161/264 (60.98%), Query Frame = 1
Query: 19 LGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFA 810
+GYCPQ DPL+ LMT ETL+ F LK + RS + V+L P +++ G+ SGGNKRKLSLA+AL+G P V+ LDEPSSGMDP +RR MW++I RS+VLTTHSMEECEA+C R+GIM GR +CLG QHLK ++GGGY++E+R + + E + GL P +RL+E H +KF +P TAGLSL+ F+ +E+ K+ L V DYS +Q +LE+IF+S A
Sbjct: 28 MGYCPQADPLIELMTARETLVMFARLKNLPE-----RSIPQVVQALLDK---VTLTPYADRVCGSYSGGNKRKLSLAIALVGSPAVIFLDEPSSGMDPKSRRKMWDIIMKERTLRSIVLTTHSMEECEALCTRIGIMTAGRFQCLGGQQHLKSKYGGGYTLELRVDDSLAAGLPEKMTGLFPGSRLEEAHAGKLKFELP-------------------------TAGLSLATVFQKMESHKEALGVLDYSASQPSLESIFLSLA 258
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S3HGW2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGW2_9STRA) HSP 1 Score: 225 bits (573), Expect = 4.320e-65 Identity = 128/283 (45.23%), Postives = 164/283 (57.95%), Query Frame = 1
Query: 4 AVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVS 852
A ++GYCPQ DPLL LM ETL FFG ++G+ E R + V L ++ GT SGGNKRKLSLAVALIGDP VL LDEPS+GMDP ARR+MW VI +SA R VVL THSMEE EA+C R+G+MV GR++C+G++QHLK RFG GY +E+R + + A ++E+H V+ + + L L+ AF +E K LQ+ DY+I+Q TLE +F+ FAKDQEEET V GVS
Sbjct: 115 ATMSMIGYCPQVDPLLDLMNGYETLWFFGRIRGIPKEVLEKRVNDLILQ--------VGLERFAHKPCGTYSGGNKRKLSLAVALIGDPRVLFLDEPSTGMDPEARRNMWTVIEQVSAERCVVLVTHSMEEVEALCTRMGVMVSGRMQCIGSAQHLKSRFGLGYQVEIRTLPARVQDCIALCEAQMLAAVVEEVHGGYVRLKV--------------------------SKDLDLAAAFSALEHNKASLQILDYNISQCTLEQVFLKFAKDQEEETGHVGGVS 363
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S2BPZ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPZ2_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.850e-64 Identity = 126/283 (44.52%), Postives = 167/283 (59.01%), Query Frame = 1
Query: 4 AVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVS 852
AV RL+GYCPQ DPLL LMT ETL FG LKG+ P +A V L +Q+ G+ SGGNKRKLS AVALIG PP+LLLDEPSSGMDP ARR MW+ +S + RSV++TTHSM+ECEA+ R+GIM G LRC+G+ QHLK R G G+ +E RC V + I+ P A ++ ++F+IP L+ L+L+ AF +E RKDE + DYSI+Q +LE++F+ FA+D + TA+ ++
Sbjct: 112 AVARLVGYCPQADPLLGLMTATETLTMFGRLKGI---PPVDLEAAVAATLEH-----VGLSVFAHQMCGSYSGGNKRKLSFAVALIGGPPILLLDEPSSGMDPIARRQMWDAVSRAAHGRSVIITTHSMQECEALATRVGIMAAGTLRCIGSCQHLKNRHGSGFWVETRCDEGRTVHVVDFIQKEFPGAGVENECGGFLRFAIPT------LDR------------------LTLAGAFRLLEDRKDEEGIHDYSISQGSLESVFLRFAEDDPQRTAAADEIA 362
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S1UEC4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEC4_9STRA) HSP 1 Score: 217 bits (552), Expect = 6.900e-61 Identity = 130/291 (44.67%), Postives = 162/291 (55.67%), Query Frame = 1
Query: 7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLS----PLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYAD 861
V + +GYCPQ DP+ LMT ETL F+G +KG+ + + A + +A + SGGNKRKLSL VALIGDP VL LDEPS+GMDPGARRSMW I +LS R +++LTTHSMEECEA+C R+GIMVGGRLRCLG+SQHLK RF Y +E R + R L+ P AR+ E H + S+P + L FE IEA ++E V +YS++Q TLE +FM FAK Q EE V GV Y D
Sbjct: 280 VRKRVGYCPQIDPIFELMTARETLAFYGRIKGLDPDSVGAAVESILELLDLTLYA--------DMIARSYSGGNKRKLSLGVALIGDPEVLFLDEPSTGMDPGARRSMWSCIEALSRRRKITIILTTHSMEECEALCTRIGIMVGGRLRCLGSSQHLKQRFLHAYEVEFRIEEAAGAPGGAFERFLAARLGPGARVVERHSPHCRVSLPG-------------------------TAMPLGRIFEAIEAHQEEAGVLEYSVSQGTLEQVFMGFAKRQREERGQVAGVVYED 537
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S3ZF35_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZF35_9EUKA) HSP 1 Score: 222 bits (566), Expect = 8.010e-60 Identity = 122/287 (42.51%), Postives = 169/287 (58.89%), Query Frame = 1
Query: 7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYADTP 867
V +L+GYCPQ D LLP MT ETL F KGV +S Q ++ + +++ G SGGNKRKLS+ +AL+GDPP++ LDEPS+GMDPGARR MW++ISS A+RSV+LTTHSMEECEA+C R+GIMVGGRLRCLG+SQ LK R+G G+ ++++ +S V ++ A + E +KF I + SL+ F IE + E + +YS+++ TLE IF+ FA+ QEEE +V G++ D+P
Sbjct: 1296 VRKLIGYCPQFDALLPNMTARETLRMFAKFKGVP------KSKMEPYLADMLKQLSLDINGWQDKPCGGYSGGNKRKLSVGIALVGDPPIVFLDEPSTGMDPGARRFMWDLISSTMATRSVILTTHSMEECEALCSRIGIMVGGRLRCLGSSQRLKSRYGSGHQLDMKVKKSSAPSVKRWVKDEFKGATIIEDQVEYIKFRI--------------------------ASASSLASVFRKIEESRVEKGIEEYSVSETTLEQIFLHFARQQEEEKGAVAGLTGIDSP 1550
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A2R6WXZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WXZ6_MARPO) HSP 1 Score: 221 bits (564), Expect = 1.550e-59 Identity = 130/272 (47.79%), Postives = 165/272 (60.66%), Query Frame = 1
Query: 7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATS-MTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAK 813
V + +GYCPQ DPLL LMT E L + LKGV R A L +Q++G SGGNKRKL+LA+AL+GDP V+ LDEPSSGMDP ARRSMW+++ +R S+VLTTHSMEECEA+C R+G+MV GRL CLG+ QHLK RFG GY++E+RC M ++ E I P ++LDE H T VK+ IP LE G+SLS F IEA KD + + DYS++Q++LE IF+SFAK
Sbjct: 1684 VQKYIGYCPQFDPLLDLMTAREHLDMYARLKGV--------PDIRVKSTVDEVLEAAGLQKYADQVSGVYSGGNKRKLALAIALVGDPAVVFLDEPSSGMDPVARRSMWDLVQDAVNNRQVSMVLTTHSMEECEALCGRVGVMVSGRLMCLGSIQHLKSRFGSGYNLEMRCKRPEDMQRLHEFITRSFPGSKLDEQHNTRVKYCIP-------LE------------------GVSLSKVFGVIEAEKDLVGLEDYSVSQSSLEQIFISFAK 1922
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.470e-59 Identity = 135/293 (46.08%), Postives = 167/293 (57.00%), Query Frame = 1
Query: 1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLS----PLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYAD 861
S + R +GYCPQ D LL L+TV+E L + +KGV +P R A + A ++ AG+LSGGNKRKLSL VALIGDP VL LDEPS+GMDPGARRSMW I +LS R +++LTTHSMEECEA+C R+GIMVGGRLRCLG+SQHLK RF Y +E R + R L+ P AR+ E H + S+P + L FE IEA ++E V +YS++Q TLE +FM FAK Q EE V GV Y D
Sbjct: 1048 SRIRRRIGYCPQFDALLELLTVSEHLELYARIKGVPEGEPMQRVVAGKLRQMDLEKFA-------DKAAGSLSGGNKRKLSLGVALIGDPEVLFLDEPSTGMDPGARRSMWSCIEALSRRRKITIILTTHSMEECEALCTRIGIMVGGRLRCLGSSQHLKQRFLHAYEVEFRIEEAAGAPGGAFERFLAARLGPGARVVERHSPHCRVSLPG-------------------------TAMPLGRIFEAIEAHQEEAGVLEYSVSQGTLEQVFMGFAKRQREERGQVAGVVYED 1308 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9805.17783.1 >prot_S-dermatodea_contig9805.17783.1 ID=prot_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=333bp MTVNETLLFFGGLKGVGSEKPAGRSSARRRRAAAAAQAAVSLGPTENQLAback to top mRNA from alignment at S-dermatodea_contig9805:3288..6962+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9805.17783.1 ID=mRNA_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3675bp|location=Sequence derived from alignment at S-dermatodea_contig9805:3288..6962+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9805:3288..6962+ >mRNA_S-dermatodea_contig9805.17783.1 ID=mRNA_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at S-dermatodea_contig9805:3288..6962+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |