mRNA_S-dermatodea_contig979.17769.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 303 bits (776), Expect = 5.470e-103 Identity = 173/188 (92.02%), Postives = 175/188 (93.09%), Query Frame = 1
Query: 1 MPSTLSKLYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCSSRDLLVLAERAREISADRSHAAGSEAQGDEAS--CALSGPVQ--QQARRTVPGVLSG 552
MPSTLSKLY AAASGSVERTVAVLSQGSV+IDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKAL KAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHA GGCSSRDLLVLAER EI+ADRSHAAGSEAQGDEAS C L GPVQ QQ RTVPGVLSG
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHA-GGCSSRDLLVLAERLGEINADRSHAAGSEAQGDEASGGCGLGGPVQVQQQGGRTVPGVLSG 187
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 221 bits (562), Expect = 2.090e-70 Identity = 120/125 (96.00%), Postives = 121/125 (96.80%), Query Frame = 1
Query: 1 MPSTLSKLYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH 375
MPSTLSKLY AAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLR GARVSVADNDGATALHLSIV KHLAVS+AL KAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH 125
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 229 bits (584), Expect = 3.960e-67 Identity = 124/132 (93.94%), Postives = 124/132 (93.94%), Query Frame = 1
Query: 1 MPSTLSKLYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCSS 396
MPSTLSKLYHA ASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAA TMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKAL KAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHA S
Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGANVDS 132
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.560e-37 Identity = 86/120 (71.67%), Postives = 91/120 (75.83%), Query Frame = 1
Query: 37 ASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCSS 396
A GSVERTVA+LS+GSVDIDG YGD GRTPLM ASTMGYLRV RVLLRLGA VSVADNDGATALHLS+ N+HLAVSKAL KAGA VEAR VDG MV+LIHA S
Sbjct: 5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGANVDS 110
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 131 bits (330), Expect = 3.530e-33 Identity = 75/88 (85.23%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 136 ASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHA 378
ASTMGYLRVVRVLLRLGARVS ADNDGATALHLSIVNKHLAVSKAL KAGA +EAR GV TPLHVAAAKGFHKGMVMLIHA
Sbjct: 38 ASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHA 125
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.260e-27 Identity = 78/144 (54.17%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 1 MPSTLSK-LYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAAGGCSSR 399
+PST S LY AA+SGSVERT+ +LS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ +DG TALH +I ++LAV+KAL KAGA VEA+ V G TPLH+AA +GF +GMV LI+A SR
Sbjct: 13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSR 156
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 7.390e-13 Identity = 59/143 (41.26%), Postives = 72/143 (50.35%), Query Frame = 1
Query: 1 MPSTLSKLYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALAKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAAGGCSSR 399
MPST S LY+AA +GSVERT+ +LS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ +DG + V G TPLH+A +GF GMV LI A SR
Sbjct: 1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSR 143
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 8.180e-13 Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 2
Query: 377 RQVDAVHAISWCWP---------SALEKSAPIVRMLPGLKRRATKPRVLLAAL--YNNKQDGPFLGYSPDQ 556
RQ +AVH++SW WP ++ +K I RM+P LKRRA KPRVLLAAL YN KQDG FLGY P++
Sbjct: 411 RQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSRYNEKQDGAFLGYLPEK 481
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 3.690e-12 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 2
Query: 377 RQVDAVHAISWCWP---------SALEKSAPIVRMLPGLKRRATKPRVLLAAL--YNNKQDGPFLG 541
RQ +AVHA+SW WP ++ +KS I RMLP LKRRA KPRVLLAA+ YNNK DG FLG
Sbjct: 357 RQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSRYNNKHDGAFLG 422
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Match: D8LJ25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ25_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 8.860e-9 Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 2
Query: 452 MLPGLKRRATKPRVLLAAL--YNNKQDGPFLGYSPDQN 559
MLP LK RA KPRVLLAA+ YNNKQDGPFLGY P++N
Sbjct: 1 MLPLLKLRAAKPRVLLAAMSRYNNKQDGPFLGYLPEKN 38 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig979.17769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig979.17769.1 >prot_S-dermatodea_contig979.17769.1 ID=prot_S-dermatodea_contig979.17769.1|Name=mRNA_S-dermatodea_contig979.17769.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp MPSTLSKLYHAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGback to top mRNA from alignment at S-dermatodea_contig979:22333..23714+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig979.17769.1 ID=mRNA_S-dermatodea_contig979.17769.1|Name=mRNA_S-dermatodea_contig979.17769.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1382bp|location=Sequence derived from alignment at S-dermatodea_contig979:22333..23714+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig979:22333..23714+ >mRNA_S-dermatodea_contig979.17769.1 ID=mRNA_S-dermatodea_contig979.17769.1|Name=mRNA_S-dermatodea_contig979.17769.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at S-dermatodea_contig979:22333..23714+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |