mRNA_S-dermatodea_contig9736.17727.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: D8LMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH3_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.730e-70 Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 1
Query: 1 AAAAERALADVKPQELLCGKCSAGSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEE 336
A AAERALAD+KP ELLCGKCSAGSGGA CSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCD CHLHGFAAKPKPCLGGA CLFGG HP KA+NG E+VLGCGICRPKPEE
Sbjct: 463 AQAAERALADIKPSELLCGKCSAGSGGASCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDACHLHGFAAKPKPCLGGAHCLFGGQHPDKAKNGEHEYVLGCGICRPKPEE 574
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: A0A6H5JCA5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA5_9PHAE) HSP 1 Score: 232 bits (591), Expect = 2.750e-68 Identity = 104/120 (86.67%), Postives = 108/120 (90.00%), Query Frame = 1
Query: 1 AAAAERALADVKPQELLCGKCSAGSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEEAEAAAVEQ 360
A AAERALAD+KP ELLCGKCSAGSGGA CSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGA CLFGG HP KA+NG E+VLGCGICRPKPEE E V+Q
Sbjct: 1435 AQAAERALADIKPSELLCGKCSAGSGGASCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGAHCLFGGQHPDKAKNGEHEYVLGCGICRPKPEE-EMGGVDQ 1553
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: A0A3P3Y9U2_PLABS (RING-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y9U2_PLABS) HSP 1 Score: 116 bits (290), Expect = 7.240e-30 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 19 ALADVKPQELLCGKCSAGSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGIC 318
A V +++C C AGSG C +HG E++E+KC +CC +A++FCGG HFC CH GF A+ +PC + C+F G HP +ARNG DE++LGC C
Sbjct: 124 AQVQVNAADVVCSSC-AGSGRVKCKQHGLEYLEYKCRYCCTGIAAFFCGGTTHFCTRCHTFGFNARAQPCPEDSTCVFYGKHPSRARNGKDEYLLGCAAC 222
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: J9I598_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I598_9SPIT) HSP 1 Score: 96.7 bits (239), Expect = 6.950e-21 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 31 VKPQELLCGKCSA---GSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEEAEAAAVEQ 360
VKP++L+CG CSA G+G DC +HG++F+E KC +CC VA +FC G HFC+ CH ++ K C G +C HPP E+ LGCG+CR E +Q
Sbjct: 512 VKPEDLICGSCSALKLGAGVTDCKKHGKDFIEFKCRYCC-TVALWFCFGTTHFCEPCHQVANDSRKKECPGIEQCPLKIDHPPTGA----EYALGCGLCRNNAEHEPLGLPQQ 619
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: A0A7S3MHU1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MHU1_9SPIT) HSP 1 Score: 76.3 bits (186), Expect = 6.890e-15 Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 28 DVKPQELLCGKC----SAGSGGADCSEHGQEFMEHKCYWCCRKVASYFC-GGVMHFCDVCHLHGFAAKPKP---CLGGARCLFGGAHPPKARNGHDE--FVLGCGICR 321
++K ++LLC KC S G DC EHG EF++ KC +CC VA +FC GG FC CH + A+ + C GG C G PKA E F LGC +CR
Sbjct: 23 ELKREDLLCKKCQSKRSLDWGVTDCEEHGNEFIDWKCMFCC-SVALFFCAGGQYTFCTPCHNNAMASDLETKTECEGGLDCPLGLKSHPKASKSAAESKFALGCSLCR 129
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: A0A388LR61_CHABU (RING-type domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388LR61_CHABU) HSP 1 Score: 78.6 bits (192), Expect = 1.510e-14 Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 10 AERALA-DVKPQELLCGKC-SAGSGGADCSE-HGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCH-----LHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICR 321
AE A A D EL+CG C S SG +C HG+E+++ KC +CC +A+++C G HFCDVCH +H P PC G + C G H P+ E LGC +CR
Sbjct: 470 AENAAAGDYNLAELICGGCASMASGAEECKRGHGKEYIQFKCRYCC-SIATFYCMGTTHFCDVCHSRRPDIHKGRIAP-PCPGPSTCPLGIPHHPQGV----ECYLGCALCR 575
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: J9IHP5_9SPIT (RING-type domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IHP5_9SPIT) HSP 1 Score: 77.4 bits (189), Expect = 3.530e-14 Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 31 VKPQELLCGKCSA---GSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEEAE 342
K ++LLC C+A G+ C+ HG+EF+E+KC +CC +AS+FC G FCD CH PK C + C F G HPP + GC +C+ EE +
Sbjct: 295 TKREDLLCVYCTALKLGNQFQPCNNHGEEFIEYKCQFCC-DIASWFCWGATRFCDPCHNIATFNIPKICNPNS-CKFNGNHPPNGQ----PHSFGCKLCKISEEEKQ 395
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: L1JRQ4_GUITC (RING-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRQ4_GUITC) HSP 1 Score: 76.6 bits (187), Expect = 5.260e-14 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 34 KPQELLCGKCSA---GSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCH---LHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEEAE 342
K ++L+CG CSA G+G C +HG +++E+KC +CC +A++FC G HFC+ CH G +P+ + C H E GC +CR K E++
Sbjct: 264 KREDLICGSCSASKLGNGRKTCKQHGDQYVEYKCRFCC-SIATFFCFGSTHFCESCHKGWTEGSNQRPQSLV--KPCTCSEKHAKNCSTAAGEHCFGCSLCRIKSHESK 369
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: J9J756_9SPIT (RING-type domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J756_9SPIT) HSP 1 Score: 77.0 bits (188), Expect = 5.280e-14 Identity = 42/112 (37.50%), Postives = 56/112 (50.00%), Query Frame = 1
Query: 34 KPQELLCGKCSAGSGG---ADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCHLHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGICRPKPEEAEAAAVEQ 360
K +++LC C+A G A C HG+++M HKC +CC + AS+FC G FCD CH PK C C G HPP F GC +C+ EE E +E+
Sbjct: 461 KKEDILCVYCTAVKSGNKFAPCKTHGEDYMGHKCQFCC-ETASWFCWGATRFCDPCHNVAAQNLPKIC-NPETCQLKGNHPPNGT----PFSFGCKLCKIFQEEEENKILER 566
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Match: F0ZCM3_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZCM3_DICPU) HSP 1 Score: 74.7 bits (182), Expect = 3.500e-13 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 28 DVKPQELLCGKCSAGSGGADCSEHGQEFMEHKCYWCCRKVASYFCGGVMHFCDVCH--LHGFAAKPKPCLGGARCLFGGAHPPKARNGHDEFVLGCGIC 318
D KP+EL+CG CSA +G C HG+EF+E+KC +CC ++ +FC G HFC CH ++ PK L +C H +EF GC +C
Sbjct: 743 DFKPEELICGGCSA-NGNEICKIHGKEFIEYKCKYCC-NISIFFCWGKTHFCADCHKKVNEVTKTPKHLLPQCKCDVEVKHQVG-----EEFCFGCTLC 834 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9736.17727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9736.17727.1 >prot_S-dermatodea_contig9736.17727.1 ID=prot_S-dermatodea_contig9736.17727.1|Name=mRNA_S-dermatodea_contig9736.17727.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=121bp AAAAERALADVKPQELLCGKCSAGSGGADCSEHGQEFMEHKCYWCCRKVAback to top mRNA from alignment at S-dermatodea_contig9736:6857..7733- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9736.17727.1 ID=mRNA_S-dermatodea_contig9736.17727.1|Name=mRNA_S-dermatodea_contig9736.17727.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=877bp|location=Sequence derived from alignment at S-dermatodea_contig9736:6857..7733- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9736:6857..7733- >mRNA_S-dermatodea_contig9736.17727.1 ID=mRNA_S-dermatodea_contig9736.17727.1|Name=mRNA_S-dermatodea_contig9736.17727.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at S-dermatodea_contig9736:6857..7733- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |