mRNA_S-dermatodea_contig9722.17721.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig9722.17721.1
Unique Name	mRNA_S-dermatodea_contig9722.17721.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Match: A0A6H5KRQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ7_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 1.860e-148
Identity = 221/396 (55.81%), Postives = 269/396 (67.93%), Query Frame = 1

Query:    4 WCAQRSGIVLGSG-KEFVVMAPRPQ--EERSRLGG----VSGKMDTAPMVEVAQDELPLCRSN-------LLHEGRWVSMKKVECDLQPEMLGSDGWPKYDMDIF-SVTEPEECFLRPNIARSSAPETVFADGGYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALWLPH-NPTIWSSGKGASQIGERAALAGCVGGPIAYYAEGEEFQDTEGSEPGSGSGSGSTLTS-RYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWHHSLEEFRGFLKGLGRHLDAMAGQDGHTPRHMFWLSSPFLVGEREPHCVFERALRYNAALRDVLEPRGWIEVDLMSMTRKWGVDIVDGMHHGPPPTRMLAYMLMHHICHGGD 1140
            WC + +G +LGSG + F V+A R    EE  R  G       ++  A +  +  D LPLCR         L  EGRWVS++  +C+L PEM+   GWP YD D+F S   PE CFL+P   R    E   A GGY W+PYDCRYDLM T+ R +C ++ NI  FLDFGDSLI+T RM RTALWLP  + ++WS+G G  +IGE A  +GCVGGPI YY E     D +        GSGST T+ RYCG E+YWQ+ PGQ+RNL   FKPDVVLANWAL+H LWHH+L+EF+ FLK LGR LD M  QDGH PR+ FWLS+PFLV EREPHCV ER L++  ALR +LEPRGWIE++ +SMTRKWGVDI+DGMHHG P TRMLAY+LMHH+CH  D
Sbjct:   90 WCTEDNGNILGSGGRRFTVVAARETTIEENKREQGDRETEEEEVAVAALAGLEWDALPLCRPGGGVPTTPLPREGRWVSLRDTKCNLSPEMVDLWGWPTYDKDMFGSAAMPEACFLKPADRRKPTGELKHAQGGYTWQPYDCRYDLMDTDTRLSCFREKNITRFLDFGDSLISTGRMARTALWLPTADSSVWSTGGGEKKIGEGAKESGCVGGPIQYYGEARHQDDRD--------GSGSTATTNRYCGVESYWQVKPGQVRNL---FKPDVVLANWALVHRLWHHTLDEFQTFLKQLGRQLDGMTEQDGHRPRYTFWLSAPFLVSEREPHCVLERGLQFTKALRGLLEPRGWIEINWVSMTRKWGVDILDGMHHGEPATRMLAYLLMHHVCHASD 474

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BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Match: D7G564_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G564_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 3.590e-100
Identity = 180/388 (46.39%), Postives = 228/388 (58.76%), Query Frame = 1

Query:    1 SWCAQRSGIVLGSGKEFVVMAPRPQEERSRLGGVSGKMDTAPMVEVAQDE--LPLCRS-NLLHE-GRWVSMKKVEC-DLQPEMLGSDG-WPKYDMDIFSVTEPEECFLRP-NIARSSAPETVFAD---GGYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALWLPHNPTIWSSGKGASQIGE-RAALAGCVGGPIAYYAEGEEFQDTEGSEPGSGSGSGSTLTSRYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWHHSLE-EFRGFLKGLGRHLDAMAGQDGHTPRHMFWLSSPFLVGEREPHCVFERALRYNAALRDVLEPRGWIEVDLMSMTRKWGVDIVDGMHHGPPPTRMLAYMLMHHIC 1128
            SWC   S  VLGSGK+  V A                    P V +A  +  LPLCRS N+L E GRWV +  VEC D++ E +  D  WP Y  DIF VT+PEECF +P N+  S      +     GGY+WKPYDCRY  ++ EAR TC +  NI  FLD+GDS+I TSR PR  LWLP N  +   GK  S+  + R   AGC  G   Y  +G++  +T        SG GS +  RYCG   +       +R+ + SF+PDVVLANW ++H LWHH    E   F + LG+ LD M       PR +FWLSSPFLV EREPHCV ERA+++N  LR VLEPRGWIEV+  ++T+KW +DI DGMHHG   TRMLA++L+H +C
Sbjct:  241 SWCTPDSARVLGSGKKLTVKA------------------AGPSVSIADGDGALPLCRSTNVLPEPGRWVGLHDVECGDMRAEGIHGDPIWPDYRRDIFGVTKPEECFFKPYNLPTSGGKVDGYQQAITGGYVWKPYDCRYPPLNVEARHTCFEALNITRFLDYGDSMIQTSRQPRAELWLPKNVDV--HGKAGSRDEQARGKQAGCPAG--FYMDDGDDDAET--------SGDGSPIKYRYCGLSGFHYSKDDAIRDYILSFRPDVVLANWGMIHKLWHHDFGGEIARFFENLGKTLDKMTENGEFRPRFLFWLSSPFLVSEREPHCVLERAVQFNDGLRAVLEPRGWIEVNWTTLTKKWALDIQDGMHHGKHATRMLAHLLVHRMC 598

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BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Match: D7FTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ1_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 9.770e-87
Identity = 150/279 (53.76%), Postives = 183/279 (65.59%), Query Frame = 1

Query:   64 PRPQEERSRLGGVSGKMDTAPMVEVAQDELPLCRSNLLHEGRWVSMKKVECDLQPEMLGSDGWPKYDMDIF-SVTEPEECFLRPNIARSSAPETVFADGGYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALWLPH-NPTIWSSGKGASQIGERAALAGCVGGPIAYYAEGEEFQDTEGSEPGSGSGSGSTLTS-RYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWHHSLEEFRGFLKGLGRHLDAMAGQDGHTP 891
            PR +E  + LG  S  +   P   V    LP        EGRWVS++  +C+L PEM+   GWP YD D+F S   PE CFL+P   R    E   A GGY W+PYDCRYDLM T+ R +C ++ NI  FLDFGDSLI+TSRM RTALWLP  + ++WS+G G ++IGE A  +GCVGGPI YY E     + +        GSGST T+ RYCG E+YWQ+ PGQ+RNLV SFKPDVVLANWAL+H LWHH+L+EF+ FLK LGR LD M  QDGH P
Sbjct:  396 PRAEESMTYLGP-SMSIARRPGGGVPTTPLP-------REGRWVSLRDTKCNLSPEMVDLWGWPTYDKDMFGSAAMPEACFLKPADRRKPTEELKHAQGGYTWQPYDCRYDLMDTDTRLSCFREKNITRFLDFGDSLISTSRMARTALWLPTADSSVWSTGGGENKIGEGAKESGCVGGPIQYYGEARHQDEHD--------GSGSTATTNRYCGVESYWQVKPGQVRNLVTSFKPDVVLANWALVHRLWHHTLDEFQTFLKQLGRQLDGMTEQDGHRP 658

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BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Match: A0A6H5JQJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ9_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 9.190e-86
Identity = 175/425 (41.18%), Postives = 221/425 (52.00%), Query Frame = 1

Query:    1 SWCAQRSGIVLGSGKEFVVMAPRPQEERSRLGGVSGKMDTAPMVEVAQDE--LPLCRS-NLLHE-GRWVSMKKVEC-DLQPEMLGSDG-WPKYDMDIFSVT----------------EPEECFLRP-NIARSSAPETVFAD---GGYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALWLPHNPTIWSSGKGASQIGERAA--LAGCVGGPIAYYAEGEEFQDTEGSEPGSGSGSGSTLTSRYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWHHSL-EEFRGFLKGLGRHLDAMAGQDGHTPRHMFWLSSPFLVGEREPHCVFERALRYNAALRDVLEPRGWIE--------------------VDLMSMTRKWGVDIVDGMHHGPPPTRMLAYMLMHHIC 1128
            SWC   +  VLGSGK+  V A  P                   V +A +E  LPLCRS N+L E GRWV ++ VEC D++ E +  D  WP+Y  DIF VT                +PEECF +P N+  S      +     GGY+WKPYDCRY L++ EAR TC +  NI  FLD+GD      R PR  LWLP N  +  + K A    ERA    A C   P  +Y +               SG G  +  RYCG  A +      +R+ + SF+PDVVLANWA++H LW H    E   F + LGR LD M       PR +FW+SSPFLV EREPHCV ERA+++N  LR VLEPRGWIE                    V+  ++T+KW VDI DGMHH    TRMLA++L+H +C
Sbjct:   82 SWCTPDNARVLGSGKKLTVKAAAP-------------------VPIADEEGALPLCRSTNVLPEPGRWVGLQDVECGDMRAEGVNGDPVWPEYRRDIFGVTKVSVLSFASLFAPYIGQPEECFFKPYNLPTSGGKVDGYQQAITGGYVWKPYDCRYSLLNVEARHTCFEALNITRFLDYGD------RQPRAELWLPRNVDV--NAKRAVNQKERARGQQADC---PTGFYMDDANT-----------SGGGLPIKYRYCGLPALYDSKDDAIRDYILSFRPDVVLANWAMMHKLWRHGYGSEITPFFENLGRTLDKMTENGEFRPRFLFWMSSPFLVSEREPHCVLERAVQFNDGLRAVLEPRGWIEASARLRVQWMNYDSCFFTFEVNWTTLTKKWAVDIQDGMHHLKHATRMLAHLLVHRMC 465

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BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Match: A0A6H5KGQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ9_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.550e-82
Identity = 161/351 (45.87%), Postives = 197/351 (56.13%), Query Frame = 1

Query:    1 SWCAQRSGIVLGSGKEFVVMAPRPQEERSRLGGVSGKMDTAPMVEVAQ--DELPLCRS-NLLHE-GRWVSMKKVEC-DLQPEMLGSDG-WPKYDMDIFSVTEPEECFLRP-NIARSSAPETVFAD---GGYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALWLPHNPTIWSSGKGASQIGE-RAALAGCVGGPIAYYAEGEEFQDTEGSEPGSGSGSGSTLTSRYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWHHSLE-EFRGFLKGLGRHLDAMAGQDGHTPRHMFWLSSPFLVGEREPHCVFERALRYNAALRDVLEPRGWIE 1017
            SWC   +  VLGSGK+  V A                    P V +A   D LP CRS N+L E GRWV ++ VEC D++ E +  D  WP Y  DIF VT+PEECF +P N+  S      +     GGY+WKPYDCRY L++ EAR TC    NI  FLD+GDS+I TSR PR  LWLP N  +   GK  SQ  + R   AGC   P  +Y +       +G      SG GS +  RYCG   +       +R+ + SF+PDVVLANW ++H LWHH    E   F + LGR LD M       PR +FWLSSPFLV EREPHCV ERA+++N  LR VLEPRGWIE
Sbjct:  310 SWCTPDNARVLGSGKKLTVKA------------------AGPSVSIADGDDALPRCRSTNVLPEPGRWVGLQDVECGDMRAEGIHGDPIWPDYRRDIFGVTKPEECFFKPYNLPTSGGKVDGYRQAITGGYVWKPYDCRYSLLNVEARHTCFDALNITRFLDYGDSMIQTSRQPRVELWLPKNVDV--HGKAGSQDAQARGKQAGC---PTGFYMD-------DGDNDAETSGGGSPIKYRYCGLSGFHYSKDYAIRDYILSFRPDVVLANWGMIHKLWHHDFGGEIAHFFENLGRALDKMTDNGEFRPRFLFWLSSPFLVSEREPHCVLERAVQFNDGLRSVLEPRGWIE 630

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9722.17721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5KRQ7_9PHAE	1.860e-148	55.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G564_ECTSI	3.590e-100	46.39	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FTZ1_ECTSI	9.770e-87	53.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JQJ9_9PHAE	9.190e-86	41.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KGQ9_9PHAE	1.550e-82	45.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9722	contig	S-dermatodea_contig9722:1523..8067 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	314.3
Seed ortholog evalue	7.4e-83
Seed eggNOG ortholog	2880.D7G564
EggNOG OGs	2EYHI@1,2T00I@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	8
Model size	1730
Cds size	1086
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9722.17721.1	prot_S-dermatodea_contig9722.17721.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig9722 2110..8010 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925427.8714168-UTR-S-dermatodea_contig9722:1522..2109	1622925427.8714168-UTR-S-dermatodea_contig9722:1522..2109	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig9722 1523..2109 -
1694079926.5875747-UTR-S-dermatodea_contig9722:1522..2109	1694079926.5875747-UTR-S-dermatodea_contig9722:1522..2109	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig9722 1523..2109 -
1622925427.9827497-UTR-S-dermatodea_contig9722:8010..8067	1622925427.9827497-UTR-S-dermatodea_contig9722:8010..8067	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig9722 8011..8067 -
1694079926.6955614-UTR-S-dermatodea_contig9722:8010..8067	1694079926.6955614-UTR-S-dermatodea_contig9722:8010..8067	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig9722 8011..8067 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig9722:1523..8067-
coding sequence from alignment at S-dermatodea_contig9722:1523..8067-

protein sequence of mRNA_S-dermatodea_contig9722.17721.1

>prot_S-dermatodea_contig9722.17721.1 ID=prot_S-dermatodea_contig9722.17721.1|Name=mRNA_S-dermatodea_contig9722.17721.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=362bp
MAPRPQEERSRLGGVSGKMDTAPMVEVAQDELPLCRSNLLHEGRWVSMKK
VECDLQPEMLGSDGWPKYDMDIFSVTEPEECFLRPNIARSSAPETVFADG
GYMWKPYDCRYDLMSTEARQTCLKKNNIASFLDFGDSLITTSRMPRTALW
LPHNPTIWSSGKGASQIGERAALAGCVGGPIAYYAEGEEFQDTEGSEPGS
GSGSGSTLTSRYCGSEAYWQLPPGQLRNLVNSFKPDVVLANWALLHHLWH
HSLEEFRGFLKGLGRHLDAMAGQDGHTPRHMFWLSSPFLVGEREPHCVFE
RALRYNAALRDVLEPRGWIEVDLMSMTRKWGVDIVDGMHHGPPPTRMLAY
MLMHHICHGGD*

mRNA from alignment at S-dermatodea_contig9722:1523..8067-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig9722.17721.1 ID=mRNA_S-dermatodea_contig9722.17721.1|Name=mRNA_S-dermatodea_contig9722.17721.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6545bp|location=Sequence derived from alignment at S-dermatodea_contig9722:1523..8067- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGCTGGTGCGCACAGCGGAGCGGTATTGTGCTGGGCAGCGGCAAGGAGTT
CGTCGTGATGGCGCCCCGACCACAGGAGGAACGTTCGCGGTTAGGAGGGG
TTTCAGGCAAGATGGACACTGCGCCAATGGTTGAGGTCGCTCAAGACGAG
CTGCCCCTGTGCAGGTGCAGTGCTTTCCGCACGTTTCGTGTCATTTCGTT
TGTGATGATTGTGCGATGCTTGCGCGTGTGCGTGCTGCTGCCGTGGTGTT
AACTTTTCGAAGAGGACTCCTGAGCTTTCTGTCTGGCGGGTAGATACTGT
TGAACGACTCCTGTCTCTGGGATGGATCGCACGGATAGCAGCAGTAGCAG
CAGTAGCAGCAACAGCTGCAATTTATACAAGTGCTACTTTTGCATGGGAC
CTTCGTCATTTACTGGCAGCACTCACGAAGGAATTATTCTCTCGTAATAC
GACTGTTGGTGTTGTTGCCTCTGCGGTGGTTGTCTGCTGCATTCAGTGGG
CCGAGGACGCGAAGTTATATAGCAGCTATTGTGCTTTCAATACCTTGCTC
GGTGCTCTGGTGCAACAGTCTAGCTACTAAAGGGCTAGGGGACGTGTCCG
GAATTGCACTCGGCCATGTTGCCATCGGCTTCGAGTGCAGGCGTTTGTAT
TTGCCCGCCTTCATCGCCGTCCTTCTGAATGAAGTTATTCAGCAGTGTAG
TAACATGTCCTGTCCTGCACACTTCTTGCCCCGCTAGCATCGTGCCGTAG
CACCCATCGTGGCCAAGTAGACCCTTCTTTCGGCTGGCTCGTACCTCCTA
GTTGCGTTTCATAAGGAAAACCGCGATCCACCACCGTTCTCATTCAATTC
TGCGCGTAGGTATTCCGTGTATGGCGTCAGACTGAAGCTGGAACACTGCA
CGCCACCGTTTGTTGTTTGCACTCCTTGCAGGTCGAATCTCCTCCACGAA
GGCAGATGGGTGAGTATGAAAAAGGTGGAGTGCGACTTGCAGCCCGAGAT
GCTCGGCTCGGACGGGTGGCCTAAGTACGATATGGACATCTTTAGCGTGA
CCGAGGTGAGCGCCCTCCGTTTTAGGGGCTCCTGTTATCGTAGTCAATGT
GCGAATTTCTATCTTCGCGGTTCGGTAATCGGTGATACGTGATGGGTGAG
ACATATTTTAGTAGTCGAAATTCGGTATTTAGCGACTTGCACTCTCTCTG
TTCTGCCCTCGATTTTTGAAGTTCCGTGTTCGGTACTCGATGTCCGAATT
TCTCTCTTCGCACTTCGGTAATCGATGATACGTAATCTATGAGACAGGTA
GTCGGAATTCGGTGTGGAGCGACTTGCATTCTCTCTGTCCCGCCTTCGGT
AGTCGGCAGAGGGCGATCTACACAGCCACCCGTGGGCCTCTGAGAAGTAA
ATCCTCGAATGGGCATGTTAACGGGCATGCCACTTGATTCTTCCCCCAGC
CCGATGTAAATGTAAAGCTCAACTTCAGCGACATTGATGGCTGCCGGTAC
CTCACATTTAGTACGATTGATTCCAACGTATGCACACGGCACCTGCTGCA
CACCAATAGTAATGCAATATTGTATAATTGCCTGCACGAGGGGCCGGAGG
GGAGGCTCCTAATACAACAGCCCGGCTCCTTTCTCCGATACCAAAATGTG
TTCCCCCCAAATCAACCAATCAATCAATCAACCAACCCCCTATTTCTTGC
CGCGTGCGGCCGTTGCCAACCGAAAAAAATCGGATCACATTATCCTCTGG
ACTCAGCCCGAGGAGTGCTTCTTGAGGCCTAATATCGCCAGATCCAGCGC
GCCGGAGACGGTGTTTGCGGACGGCGGTTACATGTGGAAGCCGTACGACT
GCCGCTATGACCTCATGAGCACCGAGGCGCGACAGACTTGCTTGAAGAAA
AATAATATCGCCAGTTTCCTCGACTTCGGAGACAGGTGCGGCAGGCCCCG
CTCGACTCGAGTGCCACTAGCGGCAGCACGCATTCACCGCGTTTGTGCGG
TTCTTGAGTCTGTTCGGGGCAGCATTTGGCGTTTATTGGTTGATTTGATG
GATTTGGTTTATTGATTTCCCACACTTACAACCACGCCACGTGGTTGAAC
TATGAATATAATAGTGCACCAACGCCCAATAAGGCGGAAGGCCCGGGTTC
GCACCCGGGCAGGGTCGATATTTAATTATTTCTCTACTTCCGTCGCGGAA
AGCGCGACTGCGTGAGTAAGCAAAATTCGAGAAATCGGCGAACTGTGGCA
GTGCCGAATCTTATGTCCGGTAAAAACCTAAGGTAAGAACATACCGGGGA
AAATATCAGATATGATAGATGCGATGATCCCTTGTGACCACAGGCGGACC
TCGGACAAGCCTTAGTGTGTCATATGTGTGCAAAAATAAAAAGAACAAAC
GGCCGGCCTGCCGATGGTTGCCGATTCCGCTGGTGGTCAGGTGATAATCG
AGGAGTCGAAAAACCTACGGAATCATCTATATAGTACCAGTACGTAAGAT
AGGATCAAGACGACGCTCGGAATCAGACCGGACCAAAACAGAGAGGGCAT
ACCTCGGAACTTGGGTCTGCTAAAACTCAGCCCCCTGCCCGACAGCAAGG
GGTCGTCACACTCATAATGTTCTAAGTCTGGCAACCTCTATCTACGCTTC
CGTGGGTCGTTTTTTCTCTTTGGTCGGTCGGCTTTTTTTGTTCCTCCAGT
GATGCGGTTCGGGGTGGCTCGCGGAATGCCTCGATAAGCTTCCTGTGATG
CCGGTTGGGCATCCTCATAGCTTCCGAGCATTTTGATTGGTTCGCCCTTT
CGCGCAGACTGCAGTGGCGTCCGTGTTCGTGTCGTATTGGCCTGCTGTTG
GTAGGGTACATTCGGGAAATACAGGGGTCGTCCACGACCATTGGAAAAAA
TATAATGTGCGTTACAGAGTGGATCGCCTTGCAGTGTTCCACCGTCAACT
TCAGTGACAAATATGTCCGGTTGGCCTCTTCGTCGATTGGCGGTGATGTC
GTTATGAGCAATGTCGTGGCCGCCGAGCCATGAGGCTGGCACTATTATAC
GTGCGCAGCAGAAGCAGTGGTAAACCACCAAGCACCAATCGCTCTCCTCA
CCACCGCCTAGTGGCACTCATTAATCACCACCACAATAACACGGCAAGCA
GCAGCACTATCCATGCTTCTGCGATATGTCTGCAGTGGCACCTCAGCGGC
GTGTATTTATTTAATGCCCGATATTCCTACGATTGTTAGAAGGGACCACG
CCCGTGTGCGGCACGACTTGACCCCCTTGTGGGTCAGCTCTGGTCGCCGA
ACATCATTGAGACGCTATCATCAAATTCGCTACGCTCGCTTGCCGTGCCG
TGTCATGTCCCCACGGGTCGTAACCTTCAGGAACCAAGTGCCGCGCAGAG
TGTTGTCCAATCGCACAAGCCTAGCTCTACCCCGAAGCGCACAAGTTGCG
ACCATAGTGTTCATGCCTCCCACGGTCGTCCTGTTGGTACTGCCAACCAT
GCTGCACGGACCTCTGATCGCCGGTGTTCTTCTTCAGCCTGATTACGACG
AGCAGGATGCCGAGAACAGCGTTGTGGCTGCCACACAACCCCACAATCTG
GTCCAGCGGGAAAGGGGCATCGCAGATCGGGGAGAGAGCGGCATTGGCCG
GTGAGCTTTGTCGGTATGGTTGCGTGACGTATGTTCCCGCCATAAAGCGT
GATCCACATGGATTGACTACAGCACGTGACTGCACACTCCACTCAGGCTC
TAGCTCATCCACGGTGGATCTTTTATATCGTAGCGGTACGTATGCTTACG
TCGACTAGGAGCGATCGCTTAGAAGGGGGTTGGCGAAATATGGTGTTGGA
TGCATGGCATAGTGGCGGTATTGGCTTGTTTTGCCGTAGGGTCCGAAGTC
GAATTTCATGTGTGGTTTTGTTCAGAAGCTTGTATTGTTGTGGTCTTCCG
TCCTCTGTGGTAACTGCACACCGATAATACCACCCATCCAACATGCCATC
GGTTGCTCGTGCTGTGGTTGGCTCGCATTAGCGCAATCGTCCTGCAGTTT
TCCCGATAATAACATTACAAAATTATTTCTAGCATCTCGTCGATGGGCTG
GACTTTTCTGGCATCCCGATATTACTTCGGATTGTTTTCATACTGCCGCG
ATTTTGTGGCACCGTTGCCCTGAGAAATGACCGATATAAAGGAGAGTTCA
CCGGCGGGTGTGCTTGCTGAATGGGGCTGTTGCCCTCTCTGGCGATCCAT
ACGCCGAGCAGCAGATAGACGAGCCGTAACGGGAAACGTACAGTGGATTC
ATGGCCACACCGAGACGTGCGTTGTTTCGAATAAAGGTGGGACCTATCCT
CGCACGTGTATAATCCAGCCATCTTTCTCGCGCCGGTGGAAGCCTGTGTG
GTTTCAGTTACGGCAATAGCGTCTTGAATCTTACATCCTCCAGTGTACAA
TACGGCGCGTACGGACTGGATGCTGTTGCCCGTATTAATAAATCGCGCGC
CAGCCCGCAGCACTGGCGTGCTTGTTCATTGGCGATCGTCGACATGTGCA
CGGCAAGGGTGGCTACGGTGCCGCCACGCTCGTGTAGAACCGTCTGTGAT
GTCGACGTTTCGCTGGGCTGTGCGTGGAAAACGTTAACGTTACAGGCTGC
GTCGGGGGTCCGATCGCGTACTACGCCGAAGGGGAAGAGTTTCAAGACAC
GGAAGGCTCGGAACCTGGGTCTGGATCGGGGTCGGGGTCGACTTTGACCA
GTCGCTACTGCGGTTCTGAGGCGTATTGGCAGTTACCTCCAGGACAACTC
AGGAACCTCGTCAACTCGGTGGGGTTGGTGGACTCGTCTTTGCTCTCTAC
ATTGCTGCGCTGTATCGCTAGGCGCAGTGCGATATTGAGGCGAATGGTAC
TGCCTCGCTAAGCTAGTCACACGTACTGCCGACCGCAGTCTACCGCTGGC
CTGACCATGAAGACACATCCGCCGCTTGCTGTTGCCGTTTCTCGACCACA
CCGCGCGCGATAACGTGTCTTGGCGCACCCGTTGCCGTCATCAGTTTAAA
CCTGACGTGGTTTTGGCGAACTGGGCTCTCCTTCATCACCTTTGGCACCA
CTCGTTGGAAGAGTTTCGTGGTTTCCTCAAGGGTCTCGGCAGGCATCTGG
ACGCGATGGCTGGCCAGGACGGACACACACCGAGGTGCGTTTGTCGAGGC
GTTGTGTGTTCGCGCGAGGGGTCCCCCCGCAGTTCGCGACGCGGCCGCAC
TCTGTGGAGCTTGGTGGTAGCTGCCTGTGAATTCAGATAGTCAATAGTGG
CGGGAAGACATGCTATACAACCTACAGGCCGAGCTACTTACTTTTTGTTT
GGTGACGTTTGACGGTGTTGGAAGTGCAGGCACATGTTTTGGTTGTCGTC
GCCCTTCCTGGTGGGCGAGAGGGAGCCGCACTGTGTCTTCGAGCGGGCGT
TGCGGTACAACGCGGCCCTCAGGGATGTGCTGGAACCCAGGGGGTGGATC
GAGGTGAGTTGCTCCCTCTGGCCGCACACGTTAGAAACATGCACACCCTT
GCCATGTGCCTGGTTGATGCTGGCGCTCAAGGTCCATGTGTTTGCTGCCT
TTGGGGTGGCACAACTATCTGATGTACGCGTGTTAAGGCTAGACACTTGT
CTAGATATTGGTGTACACTCCGGGACGCTGACTGCGATCATGTGTGCTTG
ACCGGCACGAGCTCGGTCGTAGGTCGGTGCCGAGGAGGATGTTATCCGTC
CCGAGGAAGCGCTCCTCGTCCAAACCGCCACGCCGGCGTTACTTGGCATA
CGTTGACGTGTCGCCGTGCTCGTGCCTGTCAGGTTGACTTGATGTCCATG
ACGCGGAAGTGGGGAGTTGACATCGTCGACGGCATGCATCATGGTCCACC
ACCCACGCGAATGCTGGCATATATGCTGATGCACCACATATGCCACGGCG
GTGATTGAGTCGGCTACATTGCACGTGCATCGTCCCGCTTTTAAGCGTGA
GAAATGGCGATGGCCGTGGCGATGTGAAGGGTTGTGCACCGGAAGCACTT
AGTTTTGCAATTTGCATGTGTCTTTTTCCCTCCTGAGTGCGTGTCATTTT
GCAGGGTATGGTCCAACATGCGCCCGCCAGGGGGCGCATTGCTGTAGGGG
TGGAGAACACAGACCAATCTTACGACGACGCGCTTGCTTGTGGAAAGGTT
TCTTAAGAATTCGTGTTGTAAAGTTGTTTTTGTTTTTGCGAGGCGTCAGT
GATCAGCGCGCCGGAAGGATCATGCTAGTGTCCCTGCCGCGGCGCAGCCA
GGGCCCGTCGTGCGTTGCATGTGATTGGTGAGTTATTTTATGTCTGGTAT
TTATTTTTTTGCGGATTTACAGACTCTCCCTCGTGGAGCTGAGAAAGTGT
TGGCGGGGGAACTTTGCTATTTGTTTCCCCAGTATTCGTTCATCGCTGTT
GCCCCCTGCACGTCGGAGTCTGGGGCAGCGTGGGGTATAACTACGACAGC
TGTGCTTATGGTAGCATTAAAATAAAAGAGCAGCACAATAACCTC

Coding sequence (CDS) from alignment at S-dermatodea_contig9722:1523..8067-

>mRNA_S-dermatodea_contig9722.17721.1 ID=mRNA_S-dermatodea_contig9722.17721.1|Name=mRNA_S-dermatodea_contig9722.17721.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2172bp|location=Sequence derived from alignment at S-dermatodea_contig9722:1523..8067- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGCCCCGACCACAGGAGGAACGTTCGCGGTTAGGAGGGGTTTCAGG
CAAGATGGACACTGCGCCAATGGTTGAGGTCGCTCAAGACGAGCTGCCCC
TGTGCAGATGGCGCCCCGACCACAGGAGGAACGTTCGCGGTTAGGAGGGG
TTTCAGGCAAGATGGACACTGCGCCAATGGTTGAGGTCGCTCAAGACGAG
CTGCCCCTGTGCAGGTCGAATCTCCTCCACGAAGGCAGATGGGTGAGTAT
GAAAAAGGTGGAGTGCGACTTGCAGCCCGAGATGCTCGGCTCGGACGGGT
GGCCTAAGTACGATATGGACATCTTTAGCGTGACCGAGGTCGAATCTCCT
CCACGAAGGCAGATGGGTGAGTATGAAAAAGGTGGAGTGCGACTTGCAGC
CCGAGATGCTCGGCTCGGACGGGTGGCCTAAGTACGATATGGACATCTTT
AGCGTGACCGAGCCCGAGGAGTGCTTCTTGAGGCCTAATATCGCCAGATC
CAGCGCGCCGGAGACGGTGTTTGCGGACGGCGGTTACATGTGGAAGCCGT
ACGACTGCCGCTATGACCTCATGAGCACCGAGGCGCGACAGACTTGCTTG
AAGAAAAATAATATCGCCAGTTTCCTCGACTTCGGAGACAGCCCGAGGAG
TGCTTCTTGAGGCCTAATATCGCCAGATCCAGCGCGCCGGAGACGGTGTT
TGCGGACGGCGGTTACATGTGGAAGCCGTACGACTGCCGCTATGACCTCA
TGAGCACCGAGGCGCGACAGACTTGCTTGAAGAAAAATAATATCGCCAGT
TTCCTCGACTTCGGAGACAGCCTGATTACGACGAGCAGGATGCCGAGAAC
AGCGTTGTGGCTGCCACACAACCCCACAATCTGGTCCAGCGGGAAAGGGG
CATCGCAGATCGGGGAGAGAGCGGCATTGGCCGCCTGATTACGACGAGCA
GGATGCCGAGAACAGCGTTGTGGCTGCCACACAACCCCACAATCTGGTCC
AGCGGGAAAGGGGCATCGCAGATCGGGGAGAGAGCGGCATTGGCCGGCTG
CGTCGGGGGTCCGATCGCGTACTACGCCGAAGGGGAAGAGTTTCAAGACA
CGGAAGGCTCGGAACCTGGGTCTGGATCGGGGTCGGGGTCGACTTTGACC
AGTCGCTACTGCGGTTCTGAGGCGTATTGGCAGTTACCTCCAGGACAACT
CAGGAACCTCGTCAACTCGGCTGCGTCGGGGGTCCGATCGCGTACTACGC
CGAAGGGGAAGAGTTTCAAGACACGGAAGGCTCGGAACCTGGGTCTGGAT
CGGGGTCGGGGTCGACTTTGACCAGTCGCTACTGCGGTTCTGAGGCGTAT
TGGCAGTTACCTCCAGGACAACTCAGGAACCTCGTCAACTCGTTTAAACC
TGACGTGGTTTTGGCGAACTGGGCTCTCCTTCATCACCTTTGGCACCACT
CGTTGGAAGAGTTTCGTGGTTTCCTCAAGGGTCTCGGCAGGCATCTGGAC
GCGATGGCTGGCCAGGACGGACACACACCGAGTTTAAACCTGACGTGGTT
TTGGCGAACTGGGCTCTCCTTCATCACCTTTGGCACCACTCGTTGGAAGA
GTTTCGTGGTTTCCTCAAGGGTCTCGGCAGGCATCTGGACGCGATGGCTG
GCCAGGACGGACACACACCGAGGCACATGTTTTGGTTGTCGTCGCCCTTC
CTGGTGGGCGAGAGGGAGCCGCACTGTGTCTTCGAGCGGGCGTTGCGGTA
CAACGCGGCCCTCAGGGATGTGCTGGAACCCAGGGGGTGGATCGAGGCAC
ATGTTTTGGTTGTCGTCGCCCTTCCTGGTGGGCGAGAGGGAGCCGCACTG
TGTCTTCGAGCGGGCGTTGCGGTACAACGCGGCCCTCAGGGATGTGCTGG
AACCCAGGGGGTGGATCGAGGTTGACTTGATGTCCATGACGCGGAAGTGG
GGAGTTGACATCGTCGACGGCATGCATCATGGTCCACCACCCACGCGAAT
GCTGGCATATATGCTGATGCACCACATATGCCACGGCGGTGATTGAGTTG
ACTTGATGTCCATGACGCGGAAGTGGGGAGTTGACATCGTCGACGGCATG
CATCATGGTCCACCACCCACGCGAATGCTGGCATATATGCTGATGCACCA
CATATGCCACGGCGGTGATTGA