mRNA_S-dermatodea_contig9704.17706.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9704.17706.1
Unique NamemRNA_S-dermatodea_contig9704.17706.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 5.690e-168
Identity = 256/356 (71.91%), Postives = 280/356 (78.65%), Query Frame = 1
Query:   88 GLFPADSLLELLSFLPHQEAQRILGTPLSKVYLSSFALQENIWKARCVRLWKVPAFSSCPGWRALHVDLVHCLTLVDGTAETF--RGDYDNVIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPSGEGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDVTAEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRL 1149
            GL   D+LLELLSFLPH EAQR L  PLSKVYLSSF L+ENIWKARCV  WKVP  ++C  WR LH+DLVHCL+LVDGTAE     GDY NV+AIV VLDAYRTL+EM RACF RLG LL+S+EAREA K VDWRIMDHALW LKTYPDDVD+ LKI+RFLVLAGRP GR EG V+ RPPA DG LRAFGPSG GVEAVLA MERH+SNA VQA+ACWS+VNLALI  QKRSL  QGG+                          LVTPDVT+EKIIQP+TMKAV AIVVSAIQ FSN+  IVNR CLVLHNIALDPGHL AL++IGAPEEL+HAIGKHP+D LL QCATGTLRRL
Sbjct:   23 GLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVEQWKVPPNTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGDYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 378          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.950e-33
Identity = 121/379 (31.93%), Postives = 174/379 (45.91%), Query Frame = 1
Query:  103 DSLLELLSFLPHQEAQRILGTPLSKVYLSSFALQENIWKARCVRLWKVPAFSSCPGWRALHVDLVHC---------LTLVDGTAETFRGDYDNVIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPSGEGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDVTAEKIIQPETMKA--------VAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGALDDRVDIL 1188
            D +L +L +L  +   R    P  +           +W   C         SS P WR    DL H           T+V+ T      D   +  I  ++  +  ++ +   CF  L   L  +  R+    +D  +    +  L  + +  D+Q+  +  +V   RP+G  EGMV  R  A  G     G SG G+ AVL SM  H  N+ VQAM CWS+VNLAL   QK +LL   G+ A++ AMA HP   EV FRA+FALINLV P+  +   +   TM          V   V++A++ F     +V  GCLVLHN++LD  ++  LL+ G    L  A   H  D  + + A  TLRRL +  A+   VD+L
Sbjct:  106 DLMLYVLGYLDPKARHRAAANPACRQLRDRVTKNREVWAHLC---------SSTP-WRIHRSDLEHRPVNALRRLHRTVVEATDSV---DTAPIADIARIMSDHARVAGVQVRCFRTLADRLHCETFRKNA--LDCGVASSVVRALWKFDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMASRGLDAFLGESG-GIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEAGS---VSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSH-KDADVQRSAVSTLRRLRV--AVAPEVDVL 462          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A7S3JW95_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW95_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.300e-30
Identity = 107/375 (28.53%), Postives = 179/375 (47.73%), Query Frame = 1
Query:  109 LLELLSFLPHQEAQRILGTPLSKVYLSSFALQENIWKARCV-RLWKVP-------AFSSCPGWRALHVDLVHCLTLVDGTAETFRGDYDNVIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPSGEGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDVTAEKIIQPETMKA---------------VAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGA 1164
            ++ +L +LP  E               +     NIW   C  + W++         +S+   +R LH +L+H + +        RGD   V  + N++  ++ +  +   C  RL   L  +  R+  + +D ++    ++ L+ Y  + ++Q   +  +V   RP+G  EGMV  R    +G L AF     G++ VL +M+ H S++ VQA+ CWS+VNLAL   QK  +L + GI  I+RAM  HP   +V FRA+FALINLV P+   ++  Q +                   +   V+ A+  F +   ++  GCLVLHN++L P ++  L +    + L+ A   H +D  + + A  TLRRL +  A
Sbjct:  117 VVHILEYLPVNERXXXXXXXXXXXXAHNVRENINIWFPLCTAKPWQMSWSDLEERGYSTASEFRELHTNLIHAIDIAR------RGD---VAQVANIMKEFQDVIGLQYECLERLIIALHCERVRK--RAIDAKLASCVIYILQRYSHNTELQSMALHCIVFLARPIGGAEGMVFCRGVHSNG-LEAF--LYGGIDIVLDAMKNHISSSVVQAVGCWSLVNLALNRQQKIDILTKNGIQCIIRAMQIHPHCLDVQFRALFALINLVIPENVQQQFNQNDPHNTNTNNTFLPQDTISHDILDHVLIAMDRFGDSDKLIRCGCLVLHNLSLRPTNIPILQANNTSKPLLRAARTH-NDHDVQRSAISTLRRLGISHA 476          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.520e-29
Identity = 101/297 (34.01%), Postives = 143/297 (48.15%), Query Frame = 1
Query:  355 VIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPSG--EGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDVT---------------------AEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALL-SIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGALDD 1173
            + +IVN + A+  +  +   C   L  LL+ +  R   +     +    L  +  +PD V +       +VL  RP+G  EGM+          +   G  G   G+  +L SM R  S   +QAM+CWS+VN+AL   QK  L+  GGISA   AM  HP   EV FRA+FALINLV P V                       E+ +  E +  +A +VV A++ F +   I+NR CLVLHN++L   +   LL +    + L   +  +PSD +L QCA GTL RL M  A DD
Sbjct:  355 IYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQRTTAQRAG--LTGIVLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRLQMTLASDD 649          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.500e-29
Identity = 98/286 (34.27%), Postives = 148/286 (51.75%), Query Frame = 1
Query:  355 VIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPSG-----EGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDV-------TAEKIIQPET--------MKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPG-HLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRL 1149
            + +IVN +  + ++  +   C   L  LL+ ++ R   +     + D  L  +  +P  V +       +VL  RP+G  EGM+          + + G +G      G+  +L SM R +S A +QAM+CWS+VN+AL   QK  L+  GGI A   AM  HPE+ EV FRA+FALINLV P V       T +  I+ E         ++ +  +VV A++ + +  AI+NR CLVLHN++L PG H + LL     + L   +  + +D +L Q ATGTL RL
Sbjct:  854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQRMTAQRAG--LTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRL 1137          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO)

HSP 1 Score: 135 bits (339), Expect = 3.910e-29
Identity = 101/308 (32.79%), Postives = 158/308 (51.30%), Query Frame = 1
Query:  331 TFRGDYDNV--------IAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFG-PSGEG----VEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDV-----------TAEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALL-SIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGALDDRV 1179
            T  GD  NV         +IVN + A+  +  +   C   L  +++++  R A +     + ++ L  +  +PD   +       +VL  RP+G  EGM+         ++   G P+ +G    +  +L S++R + +  +QAM+CWS+VN+AL   QK+ L+  GGI A   AM  HP D EV FRA+FALINLV P V            +EK +    +  V  +VV+A++ F +  AI+NR CLVLHNI+L   +  ALL +    + L   +  + SD +L Q A GTL RL +  + D+R+
Sbjct:  668 TATGDPGNVNLPWSCALYSIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQRAG--LTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRLQVTLSNDERL 973          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC)

HSP 1 Score: 134 bits (336), Expect = 9.410e-29
Identity = 96/283 (33.92%), Postives = 145/283 (51.24%), Query Frame = 1
Query:  355 VIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMV----LPRPPACDGALRAFGPSGE-GVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTP----------DVTAEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALLSI-GAPEELVHAIGKHPSDVLLCQCATGTLRRLNM 1155
            + +IVN + A+  +  +   C   L  LL+ ++ R   +     + D  L  + T+PD   +       +VL  RP+G  EGM+    +        A      +G+ G+  +L SM+R Q +  +QAM+CWS+VN+AL   QK  L+  GGI    RAM  HP   EV FRA+FALINLV P          +V  EK +  E++  +  +V+ A++ F    AIVNR CLVLHN++L   +   LL      + L   +  +P+D +L Q A+GTL RL +
Sbjct:  726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQRAG--LTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRLQL 1006          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A448Z2J2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2J2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.430e-28
Identity = 101/314 (32.17%), Postives = 153/314 (48.73%), Query Frame = 1
Query:  355 VIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAF----GPSGEGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDV----------------------------------TAEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIAL-DPGHLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGALDDRV 1179
            + +IVN + A+  +  +   C   L  LL++++ R   +     + D  L  +  + +  ++ +     +VL  RP G  EGM+        G  R      G S  G+  +L SM R Q NA + AM+CW++VN+AL++DQK  L+  GGI AI  AM  HP   E+ FRA+FALINLV P V                                  T E+ I  E +  +A++V+  ++ F +  AI+NR CLVLHN++L D  H   L +    + L   I    +D++L Q ATGTL RL    ALD+++
Sbjct:  550 IYSIVNWMVAFCDVEGIQILCLKVLPVLLENEQHRMTAQHAG--LADIVLRDMVMFSESAELHIAAFHTIVLLARPHGGREGMMFRTSMTAGGIFRGIYQQHGKS--GIAVMLDSMRRFQDNATLSAMSCWALVNIALVSDQKAVLVKLGGIQAITNAMYRHPYSAELQFRALFALINLVIPSVQNVENNDNGNVTNNVSENNAAAVPSVPELGDLNETTEREIIDELVGDIASLVIRVMKNFCSSEAILNRACLVLHNLSLTDDYHAILLWTPHCYQMLEWCIANFRTDLILQQSATGTLHRLQSTLALDEQM 859          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.100e-28
Identity = 97/277 (35.02%), Postives = 136/277 (49.10%), Query Frame = 1
Query:  415 CFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPA-CDGALRAFGPSGE-GVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTPDV---------------------TAEKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPG-HLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRLNMGGALDD 1173
            C   L  LL+ +  R   +     + D  L  +  +PD V++       LVL  RP+G  EGM+         G       +G+ G+  +L SM R   +  +QAM+CWSMVN+ALI  QK  L+  GGIS    AM  HP + EV FRA+FALINLV P                       T E+ +  E +  +A +VV A++ F +  AI+NR CLVLHN++L+   H   L +    + L   IG +  D +L Q A GTL+RL    A D+
Sbjct:    7 CLKVLPFLLEDENQRTTAQRAG--LTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHSAMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRLQTTLANDE 281          
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Match: A0A7S2U985_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U985_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.520e-27
Identity = 100/291 (34.36%), Postives = 150/291 (51.55%), Query Frame = 1
Query:  355 VIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHALWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFGPS-GE-GVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGISAIVRAMACHPEDREVHFRAMFALINLVTP---------------------DVTA--EKIIQPETMKAVAAIVVSAIQVFSNIAAIVNRGCLVLHNIALDPG-HLNALLSIGAPEELVHAIGKHPSDVLLCQCATGTLRRL 1149
            + ++VN +  +  +  +   C   L  LLD +  R  ++     + D  L  +  +PD V++       LVL  RP+G  EGM+         ++   G S GE G+  +L SM+R + N  +QAM+CWSMVN+ALI  QK  L+  GGI++   AM  HP + EV FRA+FALINLV P                     ++T   E+ +Q E +  +A +VV A++ F +  AI+NR CLVLHN++L+   H   L +    + L   I  +  D +L Q A GTL+RL
Sbjct:  609 IYSLVNWMAFFSDVEGIQVMCLKVLPFLLDDENQRTTSQRAG--LTDLVLRGMVLFPDSVELHTAAFHALVLLARPLGGKEGMLFHSVMVNASSIFNRGTSSGEHGMAVMLDSMKRFEDNEVLQAMSCWSMVNIALIPAQKIMLVKLGGIASAANAMMNHPYNAEVQFRALFALINLVIPSENLSENGEENQVTQEHTDDAEITCPTEREMQDENVSQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIANYKHDHVLQQSAGGTLQRL 897          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9704.17706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC51_9PHAE5.690e-16871.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZUP6_9STRA6.950e-3331.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JW95_9STRA1.300e-3028.53Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6T9YI25_9STRA1.520e-2934.01Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S3LG40_9STRA2.500e-2934.27Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JKA1_FISSO3.910e-2932.79Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FR68_PHATC9.410e-2933.92Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A448Z2J2_9STRA2.430e-2832.17Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2MKG5_9STRA9.100e-2835.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2U985_9STRA4.520e-2734.36Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9704contigS-dermatodea_contig9704:3419..6767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.2
Seed ortholog evalue5.4e-140
Seed eggNOG ortholog2880.D7FLC7
EggNOG OGs2C8IF@1,2S3J3@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-12_007670.1
Exons6
Model size1994
Cds size1170
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9704.17706.1prot_S-dermatodea_contig9704.17706.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9704 4192..6716 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925426.6027544-UTR-S-dermatodea_contig9704:3418..41911622925426.6027544-UTR-S-dermatodea_contig9704:3418..4191Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9704 3419..4191 -
1694079925.5548337-UTR-S-dermatodea_contig9704:3418..41911694079925.5548337-UTR-S-dermatodea_contig9704:3418..4191Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9704 3419..4191 -
1622925426.6836872-UTR-S-dermatodea_contig9704:6716..67671622925426.6836872-UTR-S-dermatodea_contig9704:6716..6767Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9704 6717..6767 -
1694079925.6400094-UTR-S-dermatodea_contig9704:6716..67671694079925.6400094-UTR-S-dermatodea_contig9704:6716..6767Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9704 6717..6767 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925426.6158104-CDS-S-dermatodea_contig9704:4191..44821622925426.6158104-CDS-S-dermatodea_contig9704:4191..4482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 4192..4482 -
1694079925.567457-CDS-S-dermatodea_contig9704:4191..44821694079925.567457-CDS-S-dermatodea_contig9704:4191..4482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 4192..4482 -
1622925426.6257513-CDS-S-dermatodea_contig9704:4674..50581622925426.6257513-CDS-S-dermatodea_contig9704:4674..5058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 4675..5058 -
1694079925.5860214-CDS-S-dermatodea_contig9704:4674..50581694079925.5860214-CDS-S-dermatodea_contig9704:4674..5058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 4675..5058 -
1622925426.635917-CDS-S-dermatodea_contig9704:5355..56941622925426.635917-CDS-S-dermatodea_contig9704:5355..5694Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 5356..5694 -
1694079925.598698-CDS-S-dermatodea_contig9704:5355..56941694079925.598698-CDS-S-dermatodea_contig9704:5355..5694Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 5356..5694 -
1622925426.6474779-CDS-S-dermatodea_contig9704:5971..60341622925426.6474779-CDS-S-dermatodea_contig9704:5971..6034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 5972..6034 -
1694079925.6089966-CDS-S-dermatodea_contig9704:5971..60341694079925.6089966-CDS-S-dermatodea_contig9704:5971..6034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 5972..6034 -
1622925426.6600192-CDS-S-dermatodea_contig9704:6572..66361622925426.6600192-CDS-S-dermatodea_contig9704:6572..6636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 6573..6636 -
1694079925.619415-CDS-S-dermatodea_contig9704:6572..66361694079925.619415-CDS-S-dermatodea_contig9704:6572..6636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 6573..6636 -
1622925426.6740339-CDS-S-dermatodea_contig9704:6687..67161622925426.6740339-CDS-S-dermatodea_contig9704:6687..6716Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 6688..6716 -
1694079925.6291804-CDS-S-dermatodea_contig9704:6687..67161694079925.6291804-CDS-S-dermatodea_contig9704:6687..6716Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9704 6688..6716 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9704.17706.1

>prot_S-dermatodea_contig9704.17706.1 ID=prot_S-dermatodea_contig9704.17706.1|Name=mRNA_S-dermatodea_contig9704.17706.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=390bp
MSTTNISSIAHDGLFPADSLLELLSFLPHQEAQRILGTPLSKVYLSSFAL
QENIWKARCVRLWKVPAFSSCPGWRALHVDLVHCLTLVDGTAETFRGDYD
NVIAIVNVLDAYRTLSEMARACFGRLGQLLDSDEAREATKFVDWRIMDHA
LWTLKTYPDDVDMQLKIMRFLVLAGRPVGRTEGMVLPRPPACDGALRAFG
PSGEGVEAVLASMERHQSNAKVQAMACWSMVNLALIADQKRSLLCQGGIS
AIVRAMACHPEDREVHFRAMFALINLVTPDVTAEKIIQPETMKAVAAIVV
SAIQVFSNIAAIVNRGCLVLHNIALDPGHLNALLSIGAPEELVHAIGKHP
SDVLLCQCATGTLRRLNMGGALDDRVDILGAGLGVVQAV*
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mRNA from alignment at S-dermatodea_contig9704:3419..6767-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9704.17706.1 ID=mRNA_S-dermatodea_contig9704.17706.1|Name=mRNA_S-dermatodea_contig9704.17706.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3349bp|location=Sequence derived from alignment at S-dermatodea_contig9704:3419..6767- (Saccorhiza dermatodea SderLu1190fm monoicous)
TTGGGCCTAAGCCAACTGGGTAGGAGGCACTCTCACCATTATTTGGCGAC GATGTCGACGACCAACATCTCATCCATCGCCACGGCTGGAATTGTGCGCG GGGCCGTTGACGACGTAGTCGACGGCCCCGCGCACGATGGGTTGTTCCCT GCCGATTCTCTTCTGGAGCTGCTTTCTTTTCTTCCCCACCAAGAGGTGAG AATGAGGCCTGATACCTTAAGGATATTTTTTTTATATAGAAACAGAACAC AAAAAGTGTATAATCCATAACTCATCGGGACAGGACCCAGGTTGGGTTTT GTTATACACAAAACTGAGATAATTTCACGTCCGCCCGAAAGAAAATATCC TCAGTAGAACGTGGTCCAGGCGACTCCCCAAGTGCAATACTTGGCTCAGC AGAACGTACCTCGGCGAACCTTCAGTCTTGATTCTGCGCGCTTGCTACCA CATTTACTCCAAGGGAAAACGTAGATAGGATACTATTATATTGTATTATG TACTGAGCACAACACTCAAATGCGCTTATCATATCGGGTTCTGTCTCTCG TCCGCCCTGTTATGCAGTTGTATGTATGGTAATTGCGCAAGACATGCGCA ATTTTCGTTGAATCGGGCAGTCGGGTTCAAGTAGCAATTTGGGAGTCGGC GGCCATGTTCAGAGCGCTCGTACACCGACTGGCTTTCCACGTGATAACTT ACCGCGCGAGTTCATGCTCTCGGGTACGTGCAGGCACAGAGGATCCTGGG CACTCCTTTGTCGAAGGTGTACCTTTCTTCCTTCGCTCTCCAGGAGGTGA GGGGTAAAAACCTGGCATTTTTTTTTCAGTACTTTGGTACACGTGATGCA TTCCTCCTGACTATGCTCTTGTTATGATATTTAATACTACATATGTACAG CAGTATATGTAGCCTGAATCGCGTTTCAGTGGTGACTTAGGTTGTCGGGT GATGCCATGCGGCAAACGAAAGGCATAGTGGAACAGCAAGCGAGGCGACA TAAAGTGTTCTCTTTCGCAAAGGGAAGCGTGTAAAATTGGCCAAACGAAC CATCCGTGTGTATGTGACCTCAGAACATCTGGAAGGCGAGGTGCGTGCGG CTTTGGAAGGTGCCCGCCTTCTCGTCATGCCCCGGGTGGCGCGCTCTCCA CGTGGATCTTGTGCACTGCCTCACCCTTGTGGACGGAACGGCGGAGACCT TCCGTGGCGACTACGATAACGTGATCGCGATTGTCAATGTGCTGGACGCC TACCGCACGCTGTCGGAGATGGCCCGCGCATGCTTCGGACGACTCGGCCA GCTTCTGGACAGCGACGAGGCTCGCGAGGCCACGAAGTTTGTTGACTGGC GAATCATGGATCACGCCCTCTGGACGCTCAAAACCTACCCCGACGATGTC GACATGCAGCTGGTGCGTGTGTTTGTTTTTACATCCAGCTGTATACGCTG GACCGCGGAATTGTCGTTGCGCTCAACCTGTTGCATCCATGACAGGGTTC GCGTCTCTTCAGTTAATATTATAGTTTAGCCCTTGCAGACGAAAACGGGG GGGGGTGATTTTGTCTGCCACGTGGTCTAGAAAGCAAAGCCAAGCCCCCG ACATTTTGGAGACATGCGCAACCTGTCTTGGGCGGTCTCAGTCCTGATCA TTTTCGCATGACTATTCCCTCTCACAACAATCGTTTTCCGTTTCATTCTG TTCCCTCAGAAAATTATGCGCTTCCTCGTCCTGGCGGGACGCCCAGTTGG ACGCACGGAGGGTATGGTGCTTCCCCGCCCTCCTGCGTGTGATGGTGCCC TCAGAGCGTTCGGTCCGTCGGGAGAAGGCGTGGAAGCCGTGCTGGCGTCC ATGGAAAGGCACCAATCGAACGCTAAGGTCCAAGCCATGGCCTGCTGGAG CATGGTCAACCTGGCGCTCATCGCGGACCAGAAGAGGTCGCTCCTCTGCC AAGGGGGAATCTCGGCCATCGTGAGGGCTATGGCTTGCCACCCTGAAGAC CGCGAGGTCCACTTCCGTGCTATGTTCGCGCTGATCAATCTTGTTACCCC AGACGTGACGGCGGAAAAAATCATTCAGCCTGAGACGATGAAGGTGAGAG TGGACTTTTCTGTGCGGACGGACACGAGTGAGGGGAAATCCGCCAGAACA CACGTGCTGGACTTTCCTGATGTTGTGGTATTCCCAACACGTGACCCTCA TCCATGACATGGACTTTTACGTTACGTGTCGCTTCGATGTATGACCTTCC TTTATTACCTTTGGTCTCACCATTCTTGCTTGCAGGCCGTCGCCGCCATC GTTGTGTCGGCGATCCAAGTTTTCTCCAACATCGCGGCCATCGTCAACCG CGGATGCCTCGTCCTTCACAACATTGCTCTCGACCCGGGCCACCTTAATG CTTTGCTGTCCATTGGAGCTCCAGAGGAGCTTGTGCACGCGATCGGCAAA CACCCTTCGGACGTTTTGCTGTGCCAGTGTGCCACGGGGACGCTTCGGCG CCTCAACATGGGAGGGGCGTTGGACGACAGGGTGGATATTCTGGGTGCCG GCTTAGGCGTAGTCCAGGCTGTCTAAGCTGAGGAAAATCTGTATTCTTGT ATGCCTATTTTACACATGCGCTGACAGATGACAAGTGCCTTTAAATTAGC CTGGGGTGTACGTAGGGAAACTGGGTATATGTAGCATCTTTACCATATCA CCGAGGCTGTGAACAGTATATACCATGCGCTGCACTCGTGCACTCGCACT CGGGATGGTGTATTTAGGCAGCATGAGCGAAATATGTGTATAGTGTTCAC TCCTGAATGAGGATGGGACGTTGCTCAAGAATCCATCATATAGACTAGAG AAGCATGTAATTAGGCTCAAGTTCGGCGGGCGAGCGTAGGTTTATCGTGA CTGTGCTGTGTCCCGAGGAGCGTGTACCTCTTGTGCTTCTGAAACATTAC ATTTACGACTGAGTCGATACCGAGCTGAAGAAACTGAGCTACACCCGTAG TTTTCATCAGAAATATAAGCAAACAAAAAAATGTACCAGGTTGTTTACAT TACCAGCGTGGACGTTTGCTCTATTTCGCAGGGACGAGGTAGAGTGAGGG GACCAATACGCTTTTGTGGGATCAAAAACGACAGAACTTGCCGCGGGCGC GGCCGTGCAGTAGTCTAGAGTATCGACGTGTGTTTGGATAGCGAACGCTT GCTGGGTGAAAGGTTAAATGGTTGACCGAGGGAAATAATGTGTCTGCGTC TGGATGCGCAAGTTGTGTGGCTGCATAGCGCGAGAATAGAAGGGGACTAT CCAAAATCACGGTACAAGATTTTAAGAAGTTTTTTTTTTTCTCCTGGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9704:3419..6767-

>mRNA_S-dermatodea_contig9704.17706.1 ID=mRNA_S-dermatodea_contig9704.17706.1|Name=mRNA_S-dermatodea_contig9704.17706.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2340bp|location=Sequence derived from alignment at S-dermatodea_contig9704:3419..6767- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGACGACCAACATCTCATCCATCGCATGTCGACGACCAACATCTCA
TCCATCGCGCACGATGGGTTGTTCCCTGCCGATTCTCTTCTGGAGCTGCT
TTCTTTTCTTCCCCACCAAGAGGCACGATGGGTTGTTCCCTGCCGATTCT
CTTCTGGAGCTGCTTTCTTTTCTTCCCCACCAAGAGGCACAGAGGATCCT
GGGCACTCCTTTGTCGAAGGTGTACCTTTCTTCCTTCGCTCTCCAGGAGG
CACAGAGGATCCTGGGCACTCCTTTGTCGAAGGTGTACCTTTCTTCCTTC
GCTCTCCAGGAGAACATCTGGAAGGCGAGGTGCGTGCGGCTTTGGAAGGT
GCCCGCCTTCTCGTCATGCCCCGGGTGGCGCGCTCTCCACGTGGATCTTG
TGCACTGCCTCACCCTTGTGGACGGAACGGCGGAGACCTTCCGTGGCGAC
TACGATAACGTGATCGCGATTGTCAATGTGCTGGACGCCTACCGCACGCT
GTCGGAGATGGCCCGCGCATGCTTCGGACGACTCGGCCAGCTTCTGGACA
GCGACGAGGCTCGCGAGGCCACGAAGTTTGTTGACTGGCGAATCATGGAT
CACGCCCTCTGGACGCTCAAAACCTACCCCGACGATGTCGACATGCAGCT
GAACATCTGGAAGGCGAGGTGCGTGCGGCTTTGGAAGGTGCCCGCCTTCT
CGTCATGCCCCGGGTGGCGCGCTCTCCACGTGGATCTTGTGCACTGCCTC
ACCCTTGTGGACGGAACGGCGGAGACCTTCCGTGGCGACTACGATAACGT
GATCGCGATTGTCAATGTGCTGGACGCCTACCGCACGCTGTCGGAGATGG
CCCGCGCATGCTTCGGACGACTCGGCCAGCTTCTGGACAGCGACGAGGCT
CGCGAGGCCACGAAGTTTGTTGACTGGCGAATCATGGATCACGCCCTCTG
GACGCTCAAAACCTACCCCGACGATGTCGACATGCAGCTGAAAATTATGC
GCTTCCTCGTCCTGGCGGGACGCCCAGTTGGACGCACGGAGGGTATGGTG
CTTCCCCGCCCTCCTGCGTGTGATGGTGCCCTCAGAGCGTTCGGTCCGTC
GGGAGAAGGCGTGGAAGCCGTGCTGGCGTCCATGGAAAGGCACCAATCGA
ACGCTAAGGTCCAAGCCATGGCCTGCTGGAGCATGGTCAACCTGGCGCTC
ATCGCGGACCAGAAGAGGTCGCTCCTCTGCCAAGGGGGAATCTCGGCCAT
CGTGAGGGCTATGGCTTGCCACCCTGAAGACCGCGAGGTCCACTTCCGTG
CTATGTTCGCGCTGATCAATCTTGTTACCCCAGACGTGACGGCGGAAAAA
ATCATTCAGCCTGAGACGATGAAGAAAATTATGCGCTTCCTCGTCCTGGC
GGGACGCCCAGTTGGACGCACGGAGGGTATGGTGCTTCCCCGCCCTCCTG
CGTGTGATGGTGCCCTCAGAGCGTTCGGTCCGTCGGGAGAAGGCGTGGAA
GCCGTGCTGGCGTCCATGGAAAGGCACCAATCGAACGCTAAGGTCCAAGC
CATGGCCTGCTGGAGCATGGTCAACCTGGCGCTCATCGCGGACCAGAAGA
GGTCGCTCCTCTGCCAAGGGGGAATCTCGGCCATCGTGAGGGCTATGGCT
TGCCACCCTGAAGACCGCGAGGTCCACTTCCGTGCTATGTTCGCGCTGAT
CAATCTTGTTACCCCAGACGTGACGGCGGAAAAAATCATTCAGCCTGAGA
CGATGAAGGCCGTCGCCGCCATCGTTGTGTCGGCGATCCAAGTTTTCTCC
AACATCGCGGCCATCGTCAACCGCGGATGCCTCGTCCTTCACAACATTGC
TCTCGACCCGGGCCACCTTAATGCTTTGCTGTCCATTGGAGCTCCAGAGG
AGCTTGTGCACGCGATCGGCAAACACCCTTCGGACGTTTTGCTGTGCCAG
TGTGCCACGGGGACGCTTCGGCGCCTCAACATGGGAGGGGCGTTGGACGA
CAGGGTGGATATTCTGGGTGCCGGCTTAGGCGTAGTCCAGGCTGTCTAAG
CCGTCGCCGCCATCGTTGTGTCGGCGATCCAAGTTTTCTCCAACATCGCG
GCCATCGTCAACCGCGGATGCCTCGTCCTTCACAACATTGCTCTCGACCC
GGGCCACCTTAATGCTTTGCTGTCCATTGGAGCTCCAGAGGAGCTTGTGC
ACGCGATCGGCAAACACCCTTCGGACGTTTTGCTGTGCCAGTGTGCCACG
GGGACGCTTCGGCGCCTCAACATGGGAGGGGCGTTGGACGACAGGGTGGA
TATTCTGGGTGCCGGCTTAGGCGTAGTCCAGGCTGTCTAA
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