mRNA_S-dermatodea_contig970.17700.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig970.17700.1
Unique NamemRNA_S-dermatodea_contig970.17700.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig970.17700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig970contigS-dermatodea_contig970:10927..19883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2250
Cds size1179
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925426.1110864-UTR-S-dermatodea_contig970:10926..109311622925426.1110864-UTR-S-dermatodea_contig970:10926..10931Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig970 10927..10931 +
1694079925.2015302-UTR-S-dermatodea_contig970:10926..109311694079925.2015302-UTR-S-dermatodea_contig970:10926..10931Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig970 10927..10931 +
1622925426.2034585-UTR-S-dermatodea_contig970:18817..198831622925426.2034585-UTR-S-dermatodea_contig970:18817..19883Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig970 18818..19883 +
1694079925.304878-UTR-S-dermatodea_contig970:18817..198831694079925.304878-UTR-S-dermatodea_contig970:18817..19883Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig970 18818..19883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925426.120706-CDS-S-dermatodea_contig970:10931..110551622925426.120706-CDS-S-dermatodea_contig970:10931..11055Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 10932..11055 +
1694079925.2180796-CDS-S-dermatodea_contig970:10931..110551694079925.2180796-CDS-S-dermatodea_contig970:10931..11055Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 10932..11055 +
1622925426.1300604-CDS-S-dermatodea_contig970:11349..114891622925426.1300604-CDS-S-dermatodea_contig970:11349..11489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 11350..11489 +
1694079925.2321403-CDS-S-dermatodea_contig970:11349..114891694079925.2321403-CDS-S-dermatodea_contig970:11349..11489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 11350..11489 +
1622925426.1396086-CDS-S-dermatodea_contig970:13045..131381622925426.1396086-CDS-S-dermatodea_contig970:13045..13138Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 13046..13138 +
1694079925.244898-CDS-S-dermatodea_contig970:13045..131381694079925.244898-CDS-S-dermatodea_contig970:13045..13138Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 13046..13138 +
1622925426.1523108-CDS-S-dermatodea_contig970:14330..144211622925426.1523108-CDS-S-dermatodea_contig970:14330..14421Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 14331..14421 +
1694079925.2668521-CDS-S-dermatodea_contig970:14330..144211694079925.2668521-CDS-S-dermatodea_contig970:14330..14421Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 14331..14421 +
1622925426.1657088-CDS-S-dermatodea_contig970:15193..156271622925426.1657088-CDS-S-dermatodea_contig970:15193..15627Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 15194..15627 +
1694079925.2753184-CDS-S-dermatodea_contig970:15193..156271694079925.2753184-CDS-S-dermatodea_contig970:15193..15627Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 15194..15627 +
1622925426.1775527-CDS-S-dermatodea_contig970:18183..182971622925426.1775527-CDS-S-dermatodea_contig970:18183..18297Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 18184..18297 +
1694079925.283735-CDS-S-dermatodea_contig970:18183..182971694079925.283735-CDS-S-dermatodea_contig970:18183..18297Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 18184..18297 +
1622925426.1929603-CDS-S-dermatodea_contig970:18634..188171622925426.1929603-CDS-S-dermatodea_contig970:18634..18817Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 18635..18817 +
1694079925.292275-CDS-S-dermatodea_contig970:18634..188171694079925.292275-CDS-S-dermatodea_contig970:18634..18817Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig970 18635..18817 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig970.17700.1prot_S-dermatodea_contig970.17700.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig970 10932..18817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig970.17700.1

>prot_S-dermatodea_contig970.17700.1 ID=prot_S-dermatodea_contig970.17700.1|Name=mRNA_S-dermatodea_contig970.17700.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=393bp
MVNGLDTRCASEVCVKYAVSGPDGSRRQRLLCSRHFTEGHHARALDVEES
KAREEGKEMREEAAGQVALPNTRNRQLRFEHFPRLVKKTSGSVDCGSSGG
KRMRVVETGKRGASQEEPQVSAAFPESSPTTPPTEFTPLASQGSNDQSRV
SATQKVGGDDRATWRSRRRSTRSGCGMDGVSHLSPDSCLAVANPAQPIPT
QGVEPNKEGEREVTGSTRTTWSGDGALRCGGGCKRVEAGNGDALNTSRCT
GAERDVSTTFIQGRHRTRACWAFVLEDGCKITSLEQEQRGVVVKLEAQVT
FVADIASKVAANSKAVGHRVNSVKDGPGTAFQAQTTEMLDTIAPRAVEGV
VDKGDLDDHMGLRALQNVGAGEEAVSPLVYLDISTVGIKHEG*
back to top

mRNA from alignment at S-dermatodea_contig970:10927..19883+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig970.17700.1 ID=mRNA_S-dermatodea_contig970.17700.1|Name=mRNA_S-dermatodea_contig970.17700.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8957bp|location=Sequence derived from alignment at S-dermatodea_contig970:10927..19883+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGGCATGGTTAATGGCTTGGACACAAGATGCGCTAGCGAAGTCTGCGTC AAGTACGCAGTGTCCGGTCCGGATGGCAGCAGACGACAAAGGTTGCTTTG CTCTCGACACTTCACCGAGGGCCATCATGGTAAACATGTTGATATACACA CTTCATCTATAAATGCCTTACAGTAGTGTAATGCGATGGAGTTCGAATCT ATATGTAACACCCGACTTGTGATTTAGGTTTGTCATCGCCCGGGTATTTT AGCATCGTTGCTGGAAACGGTCACGAACCTCGCATGGCTGCTGATTGTTT GTGTGTCACCAAGTCCATGTTTCGTTTTTGTCTCGTCATTATCTTCACTC GTTAACAGTTGGCAGTTTCCTGTCTTGAGACGAGTCTACTCTTTTATTCC ACGATCGTGACGTTCCCGTGTAGCTCGAGCACTAGATGTTGAGGAATCAA AGGCAAGAGAGGAGGGCAAGGAGATGAGAGAGGAAGCCGCTGGGCAGGTT GCTCTGCCAAATACAAGGAACCGGCAACTGAGGTTCGAGCACTTCCCACG GCTAGTGAAGAAGGTGTGTGCTCTGCTTTTCTTGGAGCATTTCTGTGGTT TGCGTAGTTTTTAGCGCCGGGGAGATGGAAAATTGGTAAAGCTACAGCTA GTGCCTGGCCCATACTTGTTTCCTTGCGAAAGCTTAGAGGTGTGGATTAG ACTCACAACCGAACATCCAGCTGTGGGAGCGACCCGCAGGATGGAAATGT TTAGTAGAAACCCCGAACCTCACCGGTGATTGTGGCAAACCGTATTTTGC AATCGCTACGAGCTTATGTTTTGTCTGTCGAGAACTGGTACTTTGCGTGG CTTTGTCTTGATCCCGAGTGGTACTTTCTATTTTTCTCGGCAACGATAAC ACCTACGCGTCTGCCGTACTTCCTATGGAAGCGGCCGGGGATCTTAGTAT ATGCTGTCCGACGTAAATGTTGTTTCGCAGAACTCCCTGGCGCCTTCCTA GCTTTTTCCTTCCCCACTTCGAGCAACGGTCTGACACGTTTTTTGAACAT TGGAAAGGAGATCTCGAGAAGATGTCGTGCTATGAATCGTAGGCTCTCGT AGTTTATACGTTTGGGGTCCCAACGTTTCAATTACGTTGATATGCGATGC TACGGTCAGCACCATCGCCTCCGCAGAGGTATTTGAATTTTCCAGACCAA GTGCGTCAGGATTTGGTTCGTAACAGCCGAAGGTTAACTTCCAGACCTTT AAATAAGGTGCGGCCGCCGATTTAAGCATCATGGGCAACGACGATTAAGA AGCTGCCTTCTACATCCAAATCGTACTGCAGGCCCGTTGGGAGGTTAACT ATACTTACGATTTGGGCAAGCTTGTCGTTTTGCCTACAAGAATTTTGACG AGTAGCAGTTGTCTGTGAGAACGAGGGGCCATGCTGTTCGACTTCCCGCT TAAAGTGTCTCTACCACCAAAAGACACGTCTAGTCGGATTCCTTACGCGA AATCAGAGATTTCACGATAAGCATTGTGTAAACAACTTCGAAATCGGTAG GTGTTGTGTGTCAAAGAGGGGGTCACGTCTACCAAGGCTTCCACACACAA CGCTTCCATCAGCAGCAACAGCAGCATCGGCCATTTCCCGCACCGTCACG TGGATATCCTGCACACACTGTCAAGTGTTCGTGTGAACTTCAAGTCGCCA AAGGATTTCCGTCCAAAGGACCAACATTAAGACAGGGTGACGGCGTGCAA TGCCCATAAAAATGCGCTTGGCAGAATAACTTGGTCGCCCACCTACCGTA AAGCCCTGGGGGAGGCGTTTGGAGATATATCACGCCTTGTTGGCCTGACA TACACCAGTAGTGTTTACTCCATAGACCCCGCGATTTTCGTACTGCAACC CTTTGCACAGGTCGCATCCGTGTCGTCATCAGCTGTCGGGCTTTTGTATT GTTGCCCATGAAGGTGTACTCTAACACCCTTGTTGTTAGCAACCTTTATA GCTCCCCTCGACCTTCACTGCAAGCACTAAAGCTGTTAGTGTTGTATCTC AAGTCAAACGTATCGATTAATTTAGTAATTGGTGTAACGTACTGACAAAA CGTACAAACGTCTCGACAGACATCCGGAAGCGTGGATTGTGGTTCTTCAG GAGGGAAGCGGATGCGAGTTGTTGAAACAGGGAAGCGCGGCGCATCGCAA GAGGAACCGCAGGTATGTGTCGACATGAAAAGGTACGAGTATATTTTGTT TTGTAAAAATCATCATGTTCCTCCAAGGGATCCCGAACACACAACCGCCC ATCATACTACTGTGTTTTGGTTCTCGCATATGGTGCAGAACGTAAAGTAC ACCACCTGACGGTACACCCAAGCTTAGCTAGTCTATACTGCAGGCGATAA ACTATCTCGAGTTGAAACTCTTACCGATCGTCTAAATCCAAAATTCGAAT GGCGGTTGGTCTCGTTGTGTTGTTTTTATTGGATACGTCAACAAGGTTAA CGTTGTGTTACTTTCACGCTTGCCCCCCGCAACCTTGGCGAGGAGGATAA AGTGAGACTAGCCATTAGTGAACACCGGTACAATAGGACAAGGTCTAGCC CTGCCCAGAGTCCGACGCCGAGCCGGCCAAAGGTTAAGCGCCCACCCCCC TCTGATCAGTCCCAAAGTCACATGCAAAACAAGGCGGCACTGTTCGGCAC TTTATAGCTTCTACTCTGTTCCCAGTCTTGGCTATAGCGTTTTCCGGTCG CCGTCACTAGTGACTAGCACATTGGACGCCCTGCCAGCATCTCTGCCGTG ACCCCTCATGTACGCACTTCATGAGCGCCATACCTCTATCTTTCTTGTTT CTGCACAATGTCCGAGTCTGCATCTCCCACACACATATGCGTCTCACCTC CACTTGGGGTTATACACTCGTAATGAATACGGCTGCAAACCCCGCGAAGG CGTTTGATTGGCCGCCTCCTCCTTCATGTCTCCCCCGTTGTCATAATTTC CCAATCGGGCAATAAGGGATCCCTGTATCACACCTTGTGGCTATCGGTTA CCACTACTCCAGAGCGTTCTTAGGGGTAACATGCTGGAGGTCTACCTTCA GGAATATTCAGACCCTTACTTTACCCACTTGACATTGCATAGGTGAAACC TATATCGGTAAGTGTTTCTTTCGCTTGCCCCCGTTGGGTCCTAGTAGAGC TCCTCCGCTAAAAACGTAGGTCCCTTCTCTACAGCAGGTTTCAGGATGAC ATCACCTCAACCTCACACGAGATCGACCGATTGCCAGGGTTCCGCCTCGG GTAACCAGCAAACAGACGGTGTTCGTTTCACACGACGGTCCATTGGTTTC CATACGTGTTGTAGATGTTAAACCTCCGATTTGCGTGCACGCCGTACCTT GCAGGTCTCAGCTGCCTTCCCGGAATCGTCTCCAACCACGCCTCCCACAG AATTCACGCCACTCGCATCACAGGGCAGCAACGATCAATCTCGAGGTGCC TACCTTTGCGAGGGCAGTACAAAGCCGTTTGGACTGCTGGCGTTGTCATG CGTTTCCTGAAACGTAGGAGTATTTATTGGGTGTTCCCGTACTCCTGGAG TGTAGTTGCTGAGGTCAGGCTGCATAGCTACTGGCTCACCGGATATGTTT ATGATGTCGTACAGGCGTCGCGGGTGCGAAACTGCTGCTGGCGAACTACG GCTACTGTCGAACGATCGTCTTTCCCAAGTTGCTTGTGTGTGTTGTTGTT GCTGTTGTTTTCACCGTCTTGGTACATCTGCCCCTTACTCTATAATCCAG TCGTATCATTTTGAAGTGCTCGCAGAAAACACGTCTGGGAGACAGGCAGA CTACGGCTTTGCCTTGTAAGAGGAATATCCATTAGTTACAGGGAAATATT TGTTGCCATTTTTTTGTAACTGTTTTCAGCTCACTACGACGGGAGTCAAA CTAGGTAAATTAATTGATCGGTAAGTAGGTTCGTCCATAACCTATCAATG ATGTAGATCGCTCATACACGTGCTGTTATGGAGATGCCAACATACCTTGC CACGGGTCTACGCTTTAAAGACATTTGTGCCGATGACCGAGAGAAGCAGG CTCTACATGTTGCAGACCATACGGGGCCGTCGAACACGGGCTGCATCAAC CTATGATTTTCCGACCGCTCTGAAAGCCTCAACTACTGCAAGCGTTACGA TCCAAATCTCTCTGTCATACCCCGACTTCTTTCTCCGCCCACCCCTTGAC CTACCACCACTCTCAAGTGTCAGCAACGCAGAAAGTCGGCGGGGACGACA GGGCCACGTGGCGATCACGCAGACGATCGACGCGTTCCGGGTGTGGGATG GACGGTGTATCTCATCTCTCACCCGATTCATGTTTGGCAGTAGCGAATCC AGCACAACCGATTCCCACCCAAGGCGTCGAACCGAACAAGGAAGGAGAGC GAGAGGTTACTGGCTCAACAAGAACCACGTGGTCGGGGGACGGTGCTCTA CGATGTGGTGGTGGCTGCAAGCGGGTCGAAGCCGGGAACGGGGACGCGTT GAATACATCGCGTTGTACAGGTGCCGAAAGAGATGTCTCCACTACCTTTA TCCAGGGACGCCATCGTACCCGCGCGTGTTGGGCTTTTGTCCTTGAGGAC GGGTGCAAGATCACATCATTGGAGCAAGAACAACGAGGGGTGGTTGTCAA GGTGTGTGGGAAACAACTGTTGACCGGCGGAGATTACGTCAACTTGTCAT GGTCTAGCCTTGGCTACTGGACAAATTTGTACTTGCAGTGTAGATGTACA AACCAATAACTGGCCGTGGGAGCTGCCATACCAGTATCATACACTACCCC TTTCGACCTATATAACACCTCAGTGTTATACGGAAACCCATCGAACTACG CCGCGTTGAAAAAAAAAGAGAGGGCACACACAGTCGCACTCCCCTAGGAA CATACTTCTGCATATTTGTGTCGCTGCGATTCCGGATCTAATTGGCATCG TACATTTTGTTTTTGTTGGGTCCCGTATTAAATTCCGTCCCCGAGTTAAT GCCTCTGCAAAATGTCCAAAATCACTAAATATTTTTCGTGTCGGGAACCC CAATCGCGTAAACACTCGCCTCTAGCGGGCACCTTCGTGGGCGCCTCTAG CGGCGGGCGGCTTTGCCGCGACCACTGTACTGGTAGGGTCTAGTGTTGTG GCTGCTGACGAACCCAGTACTACTGCAGATACTTGCTGGCTGCGTCAGTA TCCAACCCTAAGATCTGCATTCATCTCTTCTGCTGTAGAAATTGCCAGGG GCGGTACTCTGTATTGTAGGAGTAGATATCTGATCGGTTATTTTCTCGTT AACTCTTTGCACGTCTAACTAAAATACGAGTCCAATTAAGCCACTCGGCT ATAGGTGTGCAAATCAATCAACCAGGCAGTCAAATCATTACAGGACCTGG CATAGCTGGTATTTGAAGGGAAAACGAAGTGATCATTGTACATGGGGAAT CCAACCATTGGTGGCACACGTAGTGGCCTCGGCCCGTGGAGTGGACGCCA TGATCGATTGCCAAGTAATGAAGAAACTTGTTGTTGACAACCGTAGGTCG TTTTGGGGAATGTGTTGACTTGTTTTATTACATACACGTCTATGCTAAGC CTCTCTCACGTGTGGGTTGTGGCTGTGCTACCTGGACGCCGCTTTTTGCG ACTGTCGACACGATTGCCGTGGTACACAAGTTCCCCGTGAGCAATACTTT TCTCGCGAGCGGTATGTGTACTGGCTGTATAAAATACACTACACCGCACG TTGGGCTCCGCTGTATATTGATTTACGAGGCCGGGGAACCGTACTATTTA AATTTATTTTTCATCAAACTCTGTACCTAGTCTACGACATAGATCGACGC GTCTCGTTTCCTAGTCTTGTCTCTGGAATGGTTTTCAAATGTCGCCTTGG TTAGCGCCGTAGTTGCTTATTCAATTGGCGTGTTTAATTTCGTGCCGGTT AGCTCCCTTCTAGCTCACAACTCGATCGGTTAGAGCCCTTATCGTGAGCA AAGTTTAATCTAGTTTATGGACGACGCGAAGGTGGGTTCTATTTAATCGG ACGTTTCTGTATGTTTCTCCGAACATGCCTTGCAAATAAGAAAAGGTAAA TATAACTTATGTCCTGGAACGTGTCGCTGAGAATAATCCTTTTCTCCATT CCACAGGAGGAGAACGTGTAGGAACATTTCCAAAAACTTTATCGAGCAAA ACTCTGCGAAAATAATCGTTGCTCGCCTAATACAACTATGAAACATACAC CGGCGACAAGACGTGAAGCGTTTTACTGCGTCCCGTGCAGCACACGTACA CGTAACACCACACGGCTCTGTAGGGCAACGGTGATAAGCGATAGTGGAAT TTATATGACGATTAACGCGCTGGTCGCCTTGCTAGTCTCGATATATTGAT AGATGCACCAGCAGGGCTGTCGCTACCGCAGCAACACGTCACCATAACTG CTGTGCCATCGGCGTGATGAGCTTTTGCTCAAATATTCCTCGCAGACATT AAAACAATATCTCGGCGCCACCGCGCGCCCTCATTTTGATCGATCTCGGG CAAAGCACGAAGGCTCGACGCGGTGAAAAAATGTATAGATGCCCGGGATG GGCAACCCGCTCTCTATATCGAATCCAAGTGTCCGAAAAATCCTCGCTTT GGTGCCCTCCACTACTTTATTTATTTGCCTCGCTCATTTCAAGTTCAACG TCCTCGTATACGTGGCAGGGTACGCTGTCTCGTTTCGGATAAGTAGCGTG TGTGTCTCAGGCAGGCACATGCCAAACAGCGCAATCATTTGTTTTCTCCA TTTCGGGCAGAACTTGGCCAAGAGAGCGGGTCAAACACGTTTCCCCTCTG ATATACCCTTATGTTTTCCGATTTTGTTTTGTCTACACGCAATATGACCT CACAGTGTGTGCTCAGAGACAATGCAGATCCAATCGCGCAGATCGAAACT AACGCTCCGTTTTGCGTAGGCCTAGCATGGTATTTTTTACGCGAACAAGA CCGATTCCGCCGTGGGGTTCCAGAGCAGTGCTGCGTGTGAGATATATTTA TTGGTTTATACAAAAAATCAAGAGTCCGACTACGTATAAATATTCGATGT GTCTTGTTAGCGTATGATGTACGCAGGGCCGACACATTGTGTGGTGTAAT AGCTTCACTTCGCCCTTCTCGCTAACACCGTTTTTTGTCGTTCCGGTTGA AACTAAGCTCGAGGCACAGGTGACGTTCGTTGCGGATATTGCCTCCAAGG TAGCGGCAAACTCGAAGGCCGTAGGACATCGGGTGAACAGTGTCAAGGAT GGACCCGGTACAGCATTTCAGGTACGTTCTTGGTGCGCGATGATTAGGTG TAATTTTGCTGAGTGATTTGGAACTTTGCGTGTGCTGTTAGAATGGCATC CACTTCCCTTAAAGCAACCAAGCATAAAACACGACAGAGGGGTTTACGCT GTCAACAAAGAAACGCCTTGTAGCCGCCTAGCGGATTGATCGATAAGCGA AAACGTCAACACATATGCGGGGAGAGGTGATGGAATCACGTAGCGCAGCT ATCTGTTTCCTGATCCCACATCTTTCGGAAATTGGGTGGAAATATATTTG GCAGGAGCTGACGTTACAAACTCGCCTTTAAACCGCACGTCGATCATGCC TCCCTCAGGCCCAGACGACGGAAATGCTAGACACGATTGCCCCAAGAGCA GTGGAGGGGGTGGTGGACAAAGGAGACTTGGACGACCACATGGGCTTAAG GGCACTCCAAAATGTGGGGGCGGGGGAGGAGGCCGTGTCGCCCCTGGTAT ACCTCGATATTTCGACGGTTGGGATCAAACACGAGGGTTAGAAGGCCACA GCGTTGGTAACCCTTTTGGGAGCGTTTCTTTTTACATCGTTGATGTAGGC GGCATTATCGTTTTGGCGGGACCTTATCCGATGGTATGCCACGATATCTA TCGCTTACTGCACGCGTGTTAATACAACAAGATTCGTACATGTTATTTCC GGGTGGCAGTCGAACAACCTCTTTGGGGCGGACGTTGTACGCCTTAACGT TGCGCCGATCTGTGTCGGGATAGTTTGGTCGTTTTTTGTATTTCTAGCAA GTTCTTGCGAGGGGAACTGTAGTTGGGGTGGTCGTGGGGCCCCGAAAAGC CTTGAAGCGCCAAAACAGCGAGGATTACAGACCTGCGGGTTTATGAAACG GCCAGCTGTAAATCTCCCACGTTCAGCAAAATTTCCGCCTTCCAGCAGGT CTTCGAGCTGACCACGAGACCTTATTCCTTAAGATGCGTCACGATTTCAG TATTCTACGTAGTACCTGGTACATGTTTACCTGTCCACGCGGAAGAAAAC GATTTCGTCTGTCTGCGGCATGTGCGGTTGCACTTGAGAACATTTTATTT CTGCAATCATGCAAGCATAATTTTATCAAAGAGCTGCTTGAGAGTTGGCG TGTTGGGGCATATATCCTGCTGTGTCGTATTGATCTAGATTGCAGTATTT CAACTCGAACATCAAACACAGGCTGCGCAGTAACTACGTCGTCCCCGCGA TACGAAGTATGGCCATGGTGGAAACCTTTTCGCGAGTAAATAGCGTCAGC ATATACAGTGTACTGTCATTATTGAATCCAACATGCGAGCCAAGGACTCT GCCATCTGTCATCAGTACAATTCGTTTCGTGAACCAGTTTCTTCTGGCAT AGTGATCTTTAACCCTTTTGGTACTAGACCCCTGTTTGGAGCGCCTACTA GCACGTAATGAGGCGTGCTTGAAGCGGGTCCCTGGGGAACTCCATGGGTT ATGACGCAGGAATGAGAGAGAACGGAGCGCAAGGAGACCGGGGCTGTAGC TGTCGACTGGCATCTATATAGTTTATGGTCGTTTCGGAGATCCCTATTAA TTATTAA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig970:10927..19883+

>mRNA_S-dermatodea_contig970.17700.1 ID=mRNA_S-dermatodea_contig970.17700.1|Name=mRNA_S-dermatodea_contig970.17700.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2358bp|location=Sequence derived from alignment at S-dermatodea_contig970:10927..19883+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTTAATGGCTTGGACACAAGATGCGCTAGCGAAGTCTGCGTCAAGTA
CGCAGTGTCCGGTCCGGATGGCAGCAGACGACAAAGGTTGCTTTGCTCTC
GACACTTCACCGAGGGCCATCATGATGGTTAATGGCTTGGACACAAGATG
CGCTAGCGAAGTCTGCGTCAAGTACGCAGTGTCCGGTCCGGATGGCAGCA
GACGACAAAGGTTGCTTTGCTCTCGACACTTCACCGAGGGCCATCATGCT
CGAGCACTAGATGTTGAGGAATCAAAGGCAAGAGAGGAGGGCAAGGAGAT
GAGAGAGGAAGCCGCTGGGCAGGTTGCTCTGCCAAATACAAGGAACCGGC
AACTGAGGTTCGAGCACTTCCCACGGCTAGTGAAGAAGCTCGAGCACTAG
ATGTTGAGGAATCAAAGGCAAGAGAGGAGGGCAAGGAGATGAGAGAGGAA
GCCGCTGGGCAGGTTGCTCTGCCAAATACAAGGAACCGGCAACTGAGGTT
CGAGCACTTCCCACGGCTAGTGAAGAAGACATCCGGAAGCGTGGATTGTG
GTTCTTCAGGAGGGAAGCGGATGCGAGTTGTTGAAACAGGGAAGCGCGGC
GCATCGCAAGAGGAACCGCAGACATCCGGAAGCGTGGATTGTGGTTCTTC
AGGAGGGAAGCGGATGCGAGTTGTTGAAACAGGGAAGCGCGGCGCATCGC
AAGAGGAACCGCAGGTCTCAGCTGCCTTCCCGGAATCGTCTCCAACCACG
CCTCCCACAGAATTCACGCCACTCGCATCACAGGGCAGCAACGATCAATC
TCGAGGTCTCAGCTGCCTTCCCGGAATCGTCTCCAACCACGCCTCCCACA
GAATTCACGCCACTCGCATCACAGGGCAGCAACGATCAATCTCGAGTGTC
AGCAACGCAGAAAGTCGGCGGGGACGACAGGGCCACGTGGCGATCACGCA
GACGATCGACGCGTTCCGGGTGTGGGATGGACGGTGTATCTCATCTCTCA
CCCGATTCATGTTTGGCAGTAGCGAATCCAGCACAACCGATTCCCACCCA
AGGCGTCGAACCGAACAAGGAAGGAGAGCGAGAGGTTACTGGCTCAACAA
GAACCACGTGGTCGGGGGACGGTGCTCTACGATGTGGTGGTGGCTGCAAG
CGGGTCGAAGCCGGGAACGGGGACGCGTTGAATACATCGCGTTGTACAGG
TGCCGAAAGAGATGTCTCCACTACCTTTATCCAGGGACGCCATCGTACCC
GCGCGTGTTGGGCTTTTGTCCTTGAGGACGGGTGCAAGATCACATCATTG
GAGCAAGAACAACGAGGGGTGGTTGTCAAGTGTCAGCAACGCAGAAAGTC
GGCGGGGACGACAGGGCCACGTGGCGATCACGCAGACGATCGACGCGTTC
CGGGTGTGGGATGGACGGTGTATCTCATCTCTCACCCGATTCATGTTTGG
CAGTAGCGAATCCAGCACAACCGATTCCCACCCAAGGCGTCGAACCGAAC
AAGGAAGGAGAGCGAGAGGTTACTGGCTCAACAAGAACCACGTGGTCGGG
GGACGGTGCTCTACGATGTGGTGGTGGCTGCAAGCGGGTCGAAGCCGGGA
ACGGGGACGCGTTGAATACATCGCGTTGTACAGGTGCCGAAAGAGATGTC
TCCACTACCTTTATCCAGGGACGCCATCGTACCCGCGCGTGTTGGGCTTT
TGTCCTTGAGGACGGGTGCAAGATCACATCATTGGAGCAAGAACAACGAG
GGGTGGTTGTCAAGCTCGAGGCACAGGTGACGTTCGTTGCGGATATTGCC
TCCAAGGTAGCGGCAAACTCGAAGGCCGTAGGACATCGGGTGAACAGTGT
CAAGGATGGACCCGGTACAGCATTTCAGCTCGAGGCACAGGTGACGTTCG
TTGCGGATATTGCCTCCAAGGTAGCGGCAAACTCGAAGGCCGTAGGACAT
CGGGTGAACAGTGTCAAGGATGGACCCGGTACAGCATTTCAGGCCCAGAC
GACGGAAATGCTAGACACGATTGCCCCAAGAGCAGTGGAGGGGGTGGTGG
ACAAAGGAGACTTGGACGACCACATGGGCTTAAGGGCACTCCAAAATGTG
GGGGCGGGGGAGGAGGCCGTGTCGCCCCTGGTATACCTCGATATTTCGAC
GGTTGGGATCAAACACGAGGGTTAGGCCCAGACGACGGAAATGCTAGACA
CGATTGCCCCAAGAGCAGTGGAGGGGGTGGTGGACAAAGGAGACTTGGAC
GACCACATGGGCTTAAGGGCACTCCAAAATGTGGGGGCGGGGGAGGAGGC
CGTGTCGCCCCTGGTATACCTCGATATTTCGACGGTTGGGATCAAACACG
AGGGTTAG
back to top