mRNA_S-dermatodea_contig97.17699.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig97.17699.1
Unique NamemRNA_S-dermatodea_contig97.17699.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97.17699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97contigS-dermatodea_contig97:25673..36376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size3183
Cds size2184
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97.17699.1prot_S-dermatodea_contig97.17699.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig97 26554..36258 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925425.9686036-UTR-S-dermatodea_contig97:25672..265531622925425.9686036-UTR-S-dermatodea_contig97:25672..26553Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig97 25673..26553 -
1694079925.0931056-UTR-S-dermatodea_contig97:25672..265531694079925.0931056-UTR-S-dermatodea_contig97:25672..26553Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig97 25673..26553 -
1622925426.0781124-UTR-S-dermatodea_contig97:36258..363761622925426.0781124-UTR-S-dermatodea_contig97:36258..36376Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig97 36259..36376 -
1694079925.1878307-UTR-S-dermatodea_contig97:36258..363761694079925.1878307-UTR-S-dermatodea_contig97:36258..36376Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig97 36259..36376 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925425.981685-CDS-S-dermatodea_contig97:26553..267361622925425.981685-CDS-S-dermatodea_contig97:26553..26736Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 26554..26736 -
1694079925.1035178-CDS-S-dermatodea_contig97:26553..267361694079925.1035178-CDS-S-dermatodea_contig97:26553..26736Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 26554..26736 -
1622925425.995108-CDS-S-dermatodea_contig97:28560..286591622925425.995108-CDS-S-dermatodea_contig97:28560..28659Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 28561..28659 -
1694079925.1130443-CDS-S-dermatodea_contig97:28560..286591694079925.1130443-CDS-S-dermatodea_contig97:28560..28659Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 28561..28659 -
1622925426.0047643-CDS-S-dermatodea_contig97:28840..289661622925426.0047643-CDS-S-dermatodea_contig97:28840..28966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 28841..28966 -
1694079925.126883-CDS-S-dermatodea_contig97:28840..289661694079925.126883-CDS-S-dermatodea_contig97:28840..28966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 28841..28966 -
1622925426.0141444-CDS-S-dermatodea_contig97:30354..307881622925426.0141444-CDS-S-dermatodea_contig97:30354..30788Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 30355..30788 -
1694079925.1360993-CDS-S-dermatodea_contig97:30354..307881694079925.1360993-CDS-S-dermatodea_contig97:30354..30788Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 30355..30788 -
1622925426.0259368-CDS-S-dermatodea_contig97:31539..316301622925426.0259368-CDS-S-dermatodea_contig97:31539..31630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 31540..31630 -
1694079925.145401-CDS-S-dermatodea_contig97:31539..316301694079925.145401-CDS-S-dermatodea_contig97:31539..31630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 31540..31630 -
1622925426.0373087-CDS-S-dermatodea_contig97:32644..327341622925426.0373087-CDS-S-dermatodea_contig97:32644..32734Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 32645..32734 -
1694079925.155437-CDS-S-dermatodea_contig97:32644..327341694079925.155437-CDS-S-dermatodea_contig97:32644..32734Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 32645..32734 -
1622925426.0488827-CDS-S-dermatodea_contig97:34511..346511622925426.0488827-CDS-S-dermatodea_contig97:34511..34651Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 34512..34651 -
1694079925.1672387-CDS-S-dermatodea_contig97:34511..346511694079925.1672387-CDS-S-dermatodea_contig97:34511..34651Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 34512..34651 -
1622925426.0653682-CDS-S-dermatodea_contig97:35237..362581622925426.0653682-CDS-S-dermatodea_contig97:35237..36258Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 35238..36258 -
1694079925.178004-CDS-S-dermatodea_contig97:35237..362581694079925.178004-CDS-S-dermatodea_contig97:35237..36258Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig97 35238..36258 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig97.17699.1

>prot_S-dermatodea_contig97.17699.1 ID=prot_S-dermatodea_contig97.17699.1|Name=mRNA_S-dermatodea_contig97.17699.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=728bp
MTLCKNRDCSIRAAFGLDSTARVEFCNEHKRVGMVNVGCKRCAHQGCYKQ
PFYGMEGSRKGEFCSEHKRAGMVNVTCKRCAHQGCSKQPFYGTEGSRKGE
FCGEHKRAGMVNVKCKRCAHQGCYKQPFYGTEGSRTTEFCSEHKKPGMVN
VGCRRCAHQGCYKQPFYGTEGSRKTEFCSEHKRAGMVNVGCKRCAHQGCY
KQPNFGTEGSRTTEFCSEHKRAGMVNVGCKRCAHQGCYKQPNFGTEGSRK
TEFCSEHKRAGMVNVLHKRCAYQGCFTCPSYGKESSRKTEFCREHKRAGM
VNVLNRKGASEGCAKYAVYGPDGGRRQLLLCTRHFTEGHQAGELVVEAAK
TKEDAEEMGENADGQVSLSNTRKRALRVERFQRQAQKASGSLDCGPRGKR
MRVLEREKHDRSQDAQQVSAHVRESSPTSSATGFTPLKSQDSSDQSRVSA
TQNLGLDDRATSRARRRPTHSECGRDGVPDLAPDSCVAVAMRAQLTPIQG
VARTNTGERDVTGSTGTTGRGDGALGCGGGGERVGPGDGDALITSRCAGA
GRDVSPTSSQGHHHTRASCRFVLEDRRKIESMEQGRREAVVEANRLRNKV
VHLETQVADAVVGRAHAVAEATRKVEEEYTKIIQALRDELGPPSRILKES
KGAYEAVCEERKALRQQAQKREMVGTIAPGPAGWMLDEGEVDGHMNLWEL
TNEGAGEKAVSPLVSLHMSTVAIKPED*
back to top

mRNA from alignment at S-dermatodea_contig97:25673..36376-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig97.17699.1 ID=mRNA_S-dermatodea_contig97.17699.1|Name=mRNA_S-dermatodea_contig97.17699.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=10704bp|location=Sequence derived from alignment at S-dermatodea_contig97:25673..36376- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGTGCAAAGGGCCTGTTTGTGTCTACACGCCAGCGACCGTTTAGCGGGG
TAGGGAGGGCTGGTACTACAGCGGACGATCGTTGGGCGGGCTTGTAGAGC
TTTCAGCAGGCCGTGGATATGACTTTGTGCAAGAATCGGGACTGTTCCAT
CCGGGCCGCCTTTGGATTGGACAGCACTGCAAGGGTGGAGTTCTGCAACG
AACACAAGAGGGTGGGTATGGTGAACGTCGGTTGCAAACGGTGTGCCCAT
CAAGGATGTTACAAGCAACCATTCTATGGCATGGAGGGCAGCAGGAAGGG
GGAGTTCTGCAGCGAGCACAAGAGGGCGGGTATGGTAAACGTCACTTGCA
AACGGTGTGCCCATCAAGGATGCTCGAAGCAACCATTCTATGGCACGGAG
GGCAGCAGGAAGGGGGAGTTCTGCGGCGAGCACAAGAGGGCAGGTATGGT
GAACGTCAAATGCAAACGGTGTGCCCATCAAGGATGTTACAAGCAACCAT
TCTATGGCACGGAGGGCAGCAGAACTACGGAGTTCTGCAGCGAACATAAG
AAGCCGGGTATGGTGAACGTCGGTTGCAGACGGTGTGCCCATCAAGGATG
TTACAAGCAACCATTCTATGGCACGGAGGGCAGCAGAAAGACGGAGTTCT
GCAGCGAACACAAGAGGGCGGGTATGGTGAACGTCGGTTGCAAACGGTGT
GCCCATCAAGGGTGTTACAAGCAACCAAACTTTGGCACGGAGGGCAGCAG
AACTACGGAGTTCTGCAGCGAACACAAGAGGGCGGGTATGGTCAACGTCG
GTTGCAAACGGTGTGCCCATCAAGGGTGTTACAAGCAACCAAACTTTGGC
ACGGAGGGCAGCAGAAAGACGGAGTTCTGCAGCGAACACAAGAGGGCGGG
TATGGTAAACGTCCTACACAAACGGTGTGCCTACCAAGGATGTTTCACGT
GTCCATCGTATGGCAAGGAGAGCAGCAGAAAGACGGAGTTCTGCAGGGAA
CACAAGAGGGCGGGTATGGTGAACGTTTTAAACAGAAAGGGCGCCAGCGA
GGGTTGTGCCAAGTACGCAGTGTACGGTCCGGATGGCGGCAGACGACAAC
TGTTGCTCTGTACTCGACACTTCACGGAGGGCCATCAAGGTAAGCACGTT
GATGCACACACTTCATCTCCTCAAGTATGTTACAACGCCAGGCCCTGTCG
CGGCGTCATTTCTTACCCATTCGACGTGTGACTAGTGAACTGGATTTTAT
CGGTCCTTGTTCACGTAGTTTATTATTGGTGCAGTCTCCAGTCCGTCGAC
CAGTCGTCCGCGGGTCGTGCGAAGGCGTGGACGGTACAACCCACGTCAGT
TGGGTACCGTACTGCACGCGCGTACCACTTTATTTGTGTTGTCATTCCTT
GACTCTTGATCAGATAGGGTTCCAATCTGACCATCGTGATGTACCAGGAG
CATAACCCGCAGACGTCCTCCTGTATTTTAATGCGACGGTGTGCGAATGA
ATATATCAAGCACCCGCCTTGGGTGTTCGTTTCGTCATCGTGTGATCCGT
GTTGCATCGTTGCCGGAAACGCTCACGACCCGCGCATGGCCGCTGACTGT
TCGTGTGTCCGCAAATCCATCGTTTTCAAAAGTATCGCCACGATCTTCGT
TTGTTCACAGTTGACAGTTTCCTGTCTTGAGACGAGTCTACTCGTTTATT
CTAATGTTGTGTTTTTGTCGTGTAGCTGGAGAATTAGTCGTTGAGGCAGC
AAAGACAAAGGAGGATGCCGAGGAGATGGGAGAGAACGCTGATGGGCAGG
TGTCTCTCTCGAATACAAGGAAGCGGGCACTAAGGGTCGAGCGGTTCCAA
CGGCAGGCGCAAAAGGTGTGTGCGCTGCTTTCCTTGGAGCAGTACTGTGT
ACGTAGTTTGTGGCGGGGATATATTATATGAGGAGGACTACAGGTATTGC
CTGGCCCATACGTGTTTGATTGCGAAAGCTTATACCTGGTAGATTGGAAT
TAAACCTAGAGCAAATCAGTTAGAATTGGGAGCGACCCGCACGGTGAAAA
TATTTCGCAACAAAGAGAGATCACGCAGAACCCCCGAAGCTCCCCCCGAT
TTTTCTGTAAACTACTGACCACATCGGTAGTGAGAGTACTCGCTCTCGTT
TTGTATCCCAAGAAGACCTAATGAAAACGAAACGAGGTGGACGATTATTG
ACAACCGAATTTTCAATCGCTAGGATGTTTTTCTGTAGAGAGCTGATTCT
CTGCATGGCCTTCTCGCTTCTCGTGAGCTCAGAGAGGAACCGTTACCAAA
CATCGATGACACTCGGTGCATCACAGCCCGGGTGATTTAGGCGTTCGAGC
CCGCAGAGACAAGCGCAGATGATACCTTATCCTCATCCCGAGGTCTGCTT
TATGCTCTGTTGCTCTTTCCTGTTGCCGTCAGCAACGATAACATACACGG
GCTGGTCGCACTTCCGATGGAAGCGAAAGGGGATCTCATGGTATGCTCTC
CAACGAAAATGTTACCTCACATAAGGTCTTGGCGCATTTGTGGCTTCGCC
TTCGCCCCTTCGAGCATTGGAAAGGAGAATACAAGCAACTTCGTGCTGGA
AATCGTAGGATATCATATCATAGGTTTGGGGTCCCAACTGTTCAACAATC
TACACCGTTGATATGCGATGCTCCGTTGATCACCCGCCTACGCCTGGCTG
CCTGAGTTTCCACAACGAGCGCGGCATGGTTTGGTTGGTACTGGCGGAAG
GTGTACTTCAAACCCATGAAAACTGTTGCTGCCGCCGATTTTAAGCATCG
ACAACGCCGACGAAGTAGCCGCCTTCCACAGCCAAAGCGTCGTTCTGCCG
GGCGTGTGGAGGCTAAGTAGACTTGCAGTTGGGGAAGTTCGTCGCCCTGG
GTACAAGTATTTACACGGGTAGTAGTTGTGTATGAGAGCGGGACACCGTG
CTGTTCGACTTCCCCCTTAGGGTGCCGCTGCTACCCAAGGTCAACTTATG
TCGGATTCCTGACGTAAAATTCTCGACTTCACGATGAACATTGCGTGAAT
GAACTAGAAATCAGCAGCTTTTCTGTGTCAAAACGATGGTCACGTCTACC
CACACGACCACACACGACGCTACCATCAGCAATAACAGCAGCAGCGATTT
GCCGCACCGTGACGTGGTTTTCCTGCACAAGATGTGGGGTGTTTGTAGGA
ACTTGAAGTCGCCAAAGATTTTCCGCCGAAAGGACACACCTTTAGAGACA
GTGTGACGGCGTGATATGCCCAAGAAGGCGCCCCTGGCAGATTGCCTTGG
TCGTTACCCCCCCGCAAAACCCCGCGGCAGGCATTTTGAGCTAAATCACA
CCGTGTGGGATAAACATATAAAGTACCAGTAGGTTTGCTCCATCGACCGC
ACGGTGTTTATACTGCAGCCCATTGTGCGGGTCGCATTCGTGTGGTCATC
GGCTGTCGGCCTTTTCTATTATTGCCCATTAAGGTGTACTGCAACAGCTG
TGGTGACTGAGAACCTTTATGGCTCCCTTTTGACCTGCGCTGCAAGCAAT
GAGGCTGTATCGTGTGTATCTGAAGTCTGATCTACGGATTCATGCTGGTA
ATTTGTGAAACGCACTGAAAAACTTTACGAACTTGTTGTCAGGCATCCGG
AAGCTTGGATTGTGGTCCAAGGGGGAAGCGCATGCGAGTTCTTGAACGAG
AGAAGCACGACCGATCGCAAGACGCACAGCAGGTACGTATCGATGACAAG
TATGGTTTGCCACAAACGTACTGTTGTCCCGAGGAATCCCGATCATACAG
CCGTCGGAAATACGAATTTAGGAAGTTTTTAAAATCATCGATGTACATAG
GGGTGGAAATTGACGCAGTCCACACTACTCTGTGTTGGTTCTCGCAGCAG
GTGCAGTACTTCGAGAGTACCACCCCACGGTACACCCAAGTGTAGCTCGT
TCATACTGCGGGCGACAAACTATCTCGAGTTGATATTCTTACCGAACGTG
TAATCCCAAAATCCGCAGTTTTTATCTTTGTATTGTTGTTGTCGGATACG
TCAAAAAGGTTGAGGTTGTGTTGCCTTTGCTCTCGCCCCCCACAACCTCC
GCGAGGGGGCAAAAAGAGGGCTGGCCATTAGCCCAGACCGGTACCATATG
ACAAAACCTAGGTCTGTCCAGCCTCCGTCGCCGAGTCGGCCAAAGACTAA
GAGCCCGCACTGCTCTGTTCAGCGCCGATGTTACATTCCTGGTACGAAAC
AAGGCGACACTGTTCGTCACTAGCTTCCACTCTGTCCCGAGTCTCGGTTA
TCTCGTTTTCCGGTCGCCGTCACCCGTACCTGGGACATCGGACACCCGCC
CAACATACATGCCTTCATTCCTAATGCACACACTTTTTGAGGGCCATACC
TCTATCTGCCTTGTTTCTGGAAATCTCGGAGACTACTCTCAGGATTGCTC
AGACCATCAGTCTACCCGTTTGGCATTGCATAGGTGAAACCTTGATCAGT
AATTGGTCCTATATGTTGCCGCCGTTGGGTCCGGGTAGAGCTCCTCTGCT
AGATAGGTATAGGCCTTCTTCCCGGCAGGTGTCAGGATGACATCAACTCA
ACATCACACGAGATCGACCGATTGCCGGAGTTCCGTGTCCGGTAGCCAGG
AAACGTACCATGTTCGTTTCACGCGACGGTTCAATGGTTTGCCGTACGTG
TTGCCAATACTTAACCCCCGGTTTACGTGCACGTCTTCCGTTGCAGGTTT
CAGCACATGTCCGGGAATCGTCTCCAACCTCGTCTGCCACGGGATTCACG
CCACTTAAATCACAGGACAGCAGCGATCAATCCCGAGGTGCCTACTTTTG
CGAGGCCAGTAAAAAGCCCTTTTGACTGCGTGCGGTGTGGTGCGTTACCT
TAAAAATAGTAGTAGTTGTTTGGTGTTCCCGTACTCCGGCCTTGTAGTCG
CTGAGGTTAGGCTGCCTTGCTACTTGCTTCCCAGATATGTTTATGATGTC
GTACAGGCGTCGCGGTTTGGAAACAGCTGCTGGTGTGCTCTGAGTGCTGC
TGAACGATCGTCTTGCGCAAGTTGCCTCTCTCTGTTGCTGTTGCTGTTGT
TATAGCTCTCTTGTTACATCTGGCACTTACGCTATAATCCAGCACTTTCA
TTTTCAACTGCTCGCAAGAAAATCGTCTGTGAGACAGGAAGGCAACGGCA
TTGCCTCGTAAGAGTAATAGCCATTAGTTCGAGTGTATAATGTATTCCTT
TCTTTTGTAGCTGTTATCAGCTCACTACGACTCGAGTCAAATTTGGTCAA
TTGGTTGTTCGGTAAGTTAACTCTTCCATAATCAATCATTGATGTTGATC
GCCCATAAACGTGTAGGCATGGAGGTGGTAAGATGTCTTGCCACGGGTCT
ACGCTTTAATAATACTTGTGGCGGTAAGCGAGATGAGCAGGCGGTACTTG
TTGCATAATATAGAGGGCCGTTGAACACGGGTATACCCAGTACCCTAAAG
CCCCCACTACTGCAAACGCTACGATCTCATTCAGGCTGTGATACCCGGAC
CGTTTTCCCCGCTCTCTCTTTCACCTACCGCTCTCAAGTTTCAGCAACGC
AGAACCTTGGCCTGGACGACAGGGCCACGTCGCGAGCACGCAGACGACCG
ACACATTCAGAATGCGGGAGAGACGGTGTACCTGATCTCGCACCCGACTC
ATGCGTGGCAGTAGCGATGCGAGCACAACTGACGCCTATCCAAGGCGTCG
CTCGGACCAACACAGGGGAGCGAGATGTGACTGGCTCGACGGGGACCACG
GGGCGGGGGGACGGTGCTCTAGGATGTGGTGGTGGCGGCGAGCGGGTCGG
ACCCGGGGACGGGGATGCTTTGATCACATCGCGTTGTGCAGGCGCCGGAA
GAGATGTGTCCCCTACCTCTAGCCAGGGGCACCACCATACCCGTGCGTCT
TGTCGCTTTGTCCTTGAGGACCGGCGCAAGATTGAATCAATGGAACAAGG
AAGACGGGAGGCTGTAGTCGAGGTGTGTGGGAAACAATGTTTGATCGGCG
GGGAGTTCAGCAATTTGTCGATTTTCTCGGGTTGGGTACTGGAATATTTC
GCACTGGCAGTGTACTGGTATTGACCAATACCTCAGTACTGGCTGATGGG
GCTGCCAGTACCAGTATCATGCACCACTACTTACGTGCCAGTACATACAC
TACGACATACGTACGTTCTACACATCACCTCAATATTCAACGGCAAGCCA
TCGAATTGCGCCGAGCCGCAATGCGAGAGAGAAAGAGGGAGAAAGCCCAC
ACTCGAGCACACCCCTTGGAAATAACTTCTCAACGTATGTGTCAGCGCGA
TTCCGGAGAAAACCGGCACCGCACTTTGTCTGGCGTGTAGCACATGGGTT
GTTGGGTGTCGTATTCAATATTCGTCTCCGAGTTACTGCCTCTACATACG
GTCCAAAATCACCAAATATATATCGTCTGGTGGAGCCACATCGGGTAAAA
AGGTGCGTCAAGCGGGCTCCTCCGGGGGCGCCTCTTGAAAGGTGCGGCTT
CACCGCGACCATTGTACTGGTAGTATCCAGGGTATGTGGGCGCTGACAAA
GCAAACAGATACTGGCTGGCTGGGCCAGTACCCAACCCCACACTTTGCAT
GAATCTCTTGTGCCTATGAACGTACCAGGGACAGTGCTCTGTACTGGAGA
GGTAGACATCTGATCAGTTATTTTCTCCTTCATTCTTTGCACATATGGCC
ACCAGCCAGGTCGTGTTAAGGAAATCGGCTATAGGTGTGCAACTCAACCA
ATCAGGCAATCAACTTAATATAGGGATGGTTATAGCTGGCGCTAAACCGG
AAAACCAAATGGTTATTCTGCCTGTGGAATCCAAAGATCGCTGGCACACG
TAGTGGCCTCGCCCTGTGGAGTGCACGCCACGATCGATTGCCGAGTAAGG
CAGACATATGTGCTTGCCAGCCATTGGCCGTTTTGGAGTTTGGAGTTCCT
TGTTTTATCCCAGTCTCGTCCCTACTAAGGCTCTCTCACGTGTCGATTGT
GGCTACGCTACCTCCAAGCCGCTTTTTGCGACAGTCGACACGATTGCCGT
GGGATTCAAGTTCCCCGCGAGCGCTACTTTCTTCGCAAGCGGTATGTGTC
GTCGCAGTTTGAAGACACTACGCCACACATTATGTTCCACTATCTCTTTA
TTACAAGGCACGGGAAACGTTTCAATTGAATTATGTTTGCATCAAAATCT
GTACCTGGTCTACGGCATAGATTAACGCGTCTCGATTCCTAGTCCTATCC
CTGGGAAATATTGAAATAATCGCCAGGTTCGAGCTGAAGTTGCTATTTTA
TTCGCGTGGTTCATTTCGTTCCTGTCTGCTCCCTTCTTCCCCACCACTCG
ATCTTTGAAGGCGAATCGTCTTCGGAACAAGGTGGTGCACCTCGAAACAC
AGGTGGCCGATGCCGTGGTCGGCAGGGCCCATGCGGTGGCTGAAGCAACA
CGAAAGGTCGAGGAAGAATACACGAAAATTATTCAGGTGTGCGACATTCG
CCATACTATCATACAGACGATGCCTTCTTCTGTTCTTTTGTGTTCTAAGA
CTTCGTTTGATAGCCAGACATGTTGTCGCCTTGACCTCTTGAGCGGACGG
TGACTGCTTTCCCAGCACATGTTCTTTTTCCCTTCGATACTTGCTGCTTG
TTGACTGGGTTGCCCAGGCCCTCCGCGATGAGCTCGGTCCACCGTCAAGG
ATTTTAAAAGAAAGCAAAGGCGCCTATGAGGCCGTGTGCGAGGAACGGAA
AGCACTTCGGCAGCAGGTACCGAATGCCACGTTTGGGTACCACTGATGTA
TACTTGTGCAATGGGGTTTGCCGTCCATGTGTCGCGCGCGTGTTGCAGGA
AAGCGCTGTTCTGATTCGGCGAATAGTCACCCTTCGGTCTGCGATATTAC
CTCGGTCCACAGTTATCAGGACCTATTTCAATCTCATGACCATGAATACA
ATACTAAACTATTATACTATTCCGATAATACCATGAGTACCATAGCCAAA
CAACAACCATCTCATGACAAAACAAAAGACACGAGATATGGTCATACACA
AGAACATACGCCTTGAAATCTCGAAAATTCCAGCCTATTTTTATGTTTCT
AGGTTGAAACTTGTGGCAAATTGGGATTTGTTAAAGTTAACTATTAGTAT
GGTATACTCCCCTGTTTTATTAATAGTTGTTTTTCGCTACCTTCGTCGTT
CACTTTTATGCGTCTCGGGAAAATATTTGAGTGTTGTGCTGCGATCCTGC
GCCGGGAGGTCGCTTTTTCGAGCGAGGGTCCTAAAACGTTGCAGGAGCTT
TGGTTTTTGTTTTTCTCAAAGTGGGATGATTGTCCACGTTATGGCCGGCT
TGACGCGTCGACCGGCTGTTACTACGATGCGAGCTAAACTGGGTGATGTG
GCTTTGTGTGATGGTGCGTGCGGGTTCAACGTGACGCTTACTTTACCCGC
GGAAAGTTTTCAATGCAGCAAGCTGTCCAGATATTGACTGATTTCAGCTA
GTTGTGGGGCTAATCTAAGTCATACCCAGCCCGACAGCATTGTGGGATAT
TCCTCTGCGTGGAAGTGCGTGTGGCCCTATGGTCGACACACGCGTTGTTT
TTTCAGCCTTACGGCCGCTTGAATAATGTGGTGTGCACAGCTACACGTGA
TAGTTGCTTTGCCTTGACATTGTGCTCGGTTGATCCTGATTGGGACCCTC
AAGGGACGTGCCATATTTGATGGTGTCTGTAATTTCGCCGTACCCCTTGT
CGTGGCTCCACAAGATTGATACAATTGTATCGAATGCTTTGCCAGCGTTC
TCGCTCGCGGGTGATAGCGTTTTGTGTGATTGATTGCGTTGGTTGTAGGC
CCCGAGATTCCTCAATCTTCGATGTTGCTATCACGGCTGGTGTTCGTGAC
CAGTCCATTCAAGAATATCAATGCCCATAACTGGTGTAGAGCTGCCTACG
GTGCGAGCTTCTTTCGGCCCAGCTACCTGCCGCGCTTTTCAGTGGAAACA
GCTCACTCGATCCATCTTTTGGTTTCATGGTTTTGTTTTATTCCTTGGAC
GCTTCGTTGTACTTGGTAATCGGTTGCGAAGACCAAGGCGCCGGTAGCCT
CCGCGGCTAGCAAGGTCGATGCAGAGGCGTCCAACACCGACAAGGCGAAG
GAAGACTTCCAGCAATGTATAGAGGCAATTCAGCGCCGCCGGACACTTTT
CGATGCATTTTATCGTGATATCTTTATTTTGCCTTAAATGGCCGAACAAC
ATAGCCAGGTACCATCGCTTCGAGGCGGTAGATGCCACGATTCGGAACGT
TTCTTGTGCTGCTGGAATGGTAACCACTACCTCCAACGCAACCAGCCATA
GAACACGACGCAAGGGTTGACGCTGCCTACAAGCAACGCCTTGAACGCCT
TGTAGCCGGTCAGCGGGTTGATCCATGCGCGAATATGTTAAAACGTATGC
GGGGAGGTGTGATGCAATCACGTGGCGCAGTTGTCCGTCTCCTGATCCCG
CTTCTATTTCAAAATGGCTGAATTTTGCTTTGGTGAGAGCTGACGTTGCA
AAACAACCTGTATGCCGCCCGTCGATTACGCCTCCCTCAGGCGCAGAAGA
GGGAAATGGTAGGCACGATAGCTCCAGGACCAGCGGGCTGGATGTTGGAC
GAAGGAGAGGTGGACGGCCACATGAACTTATGGGAACTAACAAATGAGGG
GGCGGGGGAGAAGGCCGTGTCGCCCCTTGTATCCCTACATATGTCGACGG
TAGCAATCAAACCCGAGGATTAGGAGGTGATAGCGCTGGCCACCCCTTTC
AAGCGCTTCTCTTGACATCGTTAGTTTAGACGGCATTGCCGTTTTGGCGG
GACCGTATCCGATGATATGCGACGATGTTGATTGCCCAATATACTCGTGT
TAAAACCATATCCGTAAGTTTTATTGTCCGGCGGGCTTAGTTCCGGATGT
TAGGCGAACAACGATTTTGGGCGTATTTTTCTCAATTTAACGATGCTACG
AACCTGTTTCGGGACTGTTTTTCCCAGTGTAGATTTAAGTTGTGAGAAAT
ATGCTGGTAGTCTCGGGTGTGCCAATACACTACTCACACAGATGTGGCAC
GAACTTTCTCTCTGGTGGTCGGTTTGTGTCAGTTTCGGATTCGGAGACTG
ATTACGCAGTGAATTTCTTCAGGATTGTCGCTCAGTGTTTTGTTTTTAAC
ACTGAGCATTGTGAAGGATTCCAAGATGGAAATCTGTATTTTTGTATGAG
AGAGAGTATCGGTCATTTGCACCCCCAGATAAGTTCATCGGGGAACGCTC
CGAGAACCCTTCCAGCGATTATTACAATTGCATTGCCCCCGAGAGGGTGT
AGCCACGTTAGCCAGTCTGCGTTGGAGCCACACTGAGGCGTGAGCGCCCA
GGCTAGCGCACAGCGCAAGAAGGTTGGTCCGAGGGGCATCCGGGGGAGCA
ACCGCTGCTCCTCGGACAGCAGGCTGCTGCTGTTCGTTGGTTCGTTCATA
TTTTTTCTCAGTTTTTTTCTTCTCAAAATCGGATTCCGCTGATTGGTGAG
AGATCTCTCCGCACAAATTGCACTTATTTTCTTGATAAGGTTCGGGATGG
GCTGATGGAGAGCACACCGCGCCGGTACCAGTCACGGCCTCCGCTGGGCG
TGGG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig97:25673..36376-

>mRNA_S-dermatodea_contig97.17699.1 ID=mRNA_S-dermatodea_contig97.17699.1|Name=mRNA_S-dermatodea_contig97.17699.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4368bp|location=Sequence derived from alignment at S-dermatodea_contig97:25673..36376- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACTTTGTGCAAGAATCGGGACTGTTCCATCCGGGCCGCCTTTGGATT
GGACAGCACTGCAAGGGTGGAGTTCTGCAACGAACACAAGAGGGTGGGTA
TGGTGAACGTCGGTTGCAAACGGTGTGCCCATCAAGGATGTTACAAGCAA
CCATTCTATGGCATGGAGGGCAGCAGGAAGGGGGAGTTCTGCAGCGAGCA
CAAGAGGGCGGGTATGGTAAACGTCACTTGCAAACGGTGTGCCCATCAAG
GATGCTCGAAGCAACCATTCTATGGCACGGAGGGCAGCAGGAAGGGGGAG
TTCTGCGGCGAGCACAAGAGGGCAGGTATGGTGAACGTCAAATGCAAACG
GTGTGCCCATCAAGGATGTTACAAGCAACCATTCTATGGCACGGAGGGCA
GCAGAACTACGGAGTTCTGCAGCGAACATAAGAAGCCGGGTATGGTGAAC
GTCGGTTGCAGACGGTGTGCCCATCAAGGATGTTACAAGCAACCATTCTA
TGGCACGGAGGGCAGCAGAAAGACGGAGTTCTGCAGCGAACACAAGAGGG
CGGGTATGGTGAACGTCGGTTGCAAACGGTGTGCCCATCAAGGGTGTTAC
AAGCAACCAAACTTTGGCACGGAGGGCAGCAGAACTACGGAGTTCTGCAG
CGAACACAAGAGGGCGGGTATGGTCAACGTCGGTTGCAAACGGTGTGCCC
ATCAAGGGTGTTACAAGCAACCAAACTTTGGCACGGAGGGCAGCAGAAAG
ACGGAGTTCTGCAGCGAACACAAGAGGGCGGGTATGGTAAACGTCCTACA
CAAACGGTGTGCCTACCAAGGATGTTTCACGTGTCCATCGTATGGCAAGG
AGAGCAGCAGAAAGACGGAGTTCTGCAGGGAACACAAGAGGGCGGGTATG
GTGAACGTTTTAAACAGAAAGGGCGCCAGCGAGGGTTGTGCCAAGTACGC
AGTGTACGGTCCGGATGGCGGCAGACGACAACTGTTGCTCTGTACTCGAC
ACTTCACGGAGGGCCATCAAGATGACTTTGTGCAAGAATCGGGACTGTTC
CATCCGGGCCGCCTTTGGATTGGACAGCACTGCAAGGGTGGAGTTCTGCA
ACGAACACAAGAGGGTGGGTATGGTGAACGTCGGTTGCAAACGGTGTGCC
CATCAAGGATGTTACAAGCAACCATTCTATGGCATGGAGGGCAGCAGGAA
GGGGGAGTTCTGCAGCGAGCACAAGAGGGCGGGTATGGTAAACGTCACTT
GCAAACGGTGTGCCCATCAAGGATGCTCGAAGCAACCATTCTATGGCACG
GAGGGCAGCAGGAAGGGGGAGTTCTGCGGCGAGCACAAGAGGGCAGGTAT
GGTGAACGTCAAATGCAAACGGTGTGCCCATCAAGGATGTTACAAGCAAC
CATTCTATGGCACGGAGGGCAGCAGAACTACGGAGTTCTGCAGCGAACAT
AAGAAGCCGGGTATGGTGAACGTCGGTTGCAGACGGTGTGCCCATCAAGG
ATGTTACAAGCAACCATTCTATGGCACGGAGGGCAGCAGAAAGACGGAGT
TCTGCAGCGAACACAAGAGGGCGGGTATGGTGAACGTCGGTTGCAAACGG
TGTGCCCATCAAGGGTGTTACAAGCAACCAAACTTTGGCACGGAGGGCAG
CAGAACTACGGAGTTCTGCAGCGAACACAAGAGGGCGGGTATGGTCAACG
TCGGTTGCAAACGGTGTGCCCATCAAGGGTGTTACAAGCAACCAAACTTT
GGCACGGAGGGCAGCAGAAAGACGGAGTTCTGCAGCGAACACAAGAGGGC
GGGTATGGTAAACGTCCTACACAAACGGTGTGCCTACCAAGGATGTTTCA
CGTGTCCATCGTATGGCAAGGAGAGCAGCAGAAAGACGGAGTTCTGCAGG
GAACACAAGAGGGCGGGTATGGTGAACGTTTTAAACAGAAAGGGCGCCAG
CGAGGGTTGTGCCAAGTACGCAGTGTACGGTCCGGATGGCGGCAGACGAC
AACTGTTGCTCTGTACTCGACACTTCACGGAGGGCCATCAAGCTGGAGAA
TTAGTCGTTGAGGCAGCAAAGACAAAGGAGGATGCCGAGGAGATGGGAGA
GAACGCTGATGGGCAGGTGTCTCTCTCGAATACAAGGAAGCGGGCACTAA
GGGTCGAGCGGTTCCAACGGCAGGCGCAAAAGCTGGAGAATTAGTCGTTG
AGGCAGCAAAGACAAAGGAGGATGCCGAGGAGATGGGAGAGAACGCTGAT
GGGCAGGTGTCTCTCTCGAATACAAGGAAGCGGGCACTAAGGGTCGAGCG
GTTCCAACGGCAGGCGCAAAAGGCATCCGGAAGCTTGGATTGTGGTCCAA
GGGGGAAGCGCATGCGAGTTCTTGAACGAGAGAAGCACGACCGATCGCAA
GACGCACAGCAGGCATCCGGAAGCTTGGATTGTGGTCCAAGGGGGAAGCG
CATGCGAGTTCTTGAACGAGAGAAGCACGACCGATCGCAAGACGCACAGC
AGGTTTCAGCACATGTCCGGGAATCGTCTCCAACCTCGTCTGCCACGGGA
TTCACGCCACTTAAATCACAGGACAGCAGCGATCAATCCCGAGGTTTCAG
CACATGTCCGGGAATCGTCTCCAACCTCGTCTGCCACGGGATTCACGCCA
CTTAAATCACAGGACAGCAGCGATCAATCCCGAGTTTCAGCAACGCAGAA
CCTTGGCCTGGACGACAGGGCCACGTCGCGAGCACGCAGACGACCGACAC
ATTCAGAATGCGGGAGAGACGGTGTACCTGATCTCGCACCCGACTCATGC
GTGGCAGTAGCGATGCGAGCACAACTGACGCCTATCCAAGGCGTCGCTCG
GACCAACACAGGGGAGCGAGATGTGACTGGCTCGACGGGGACCACGGGGC
GGGGGGACGGTGCTCTAGGATGTGGTGGTGGCGGCGAGCGGGTCGGACCC
GGGGACGGGGATGCTTTGATCACATCGCGTTGTGCAGGCGCCGGAAGAGA
TGTGTCCCCTACCTCTAGCCAGGGGCACCACCATACCCGTGCGTCTTGTC
GCTTTGTCCTTGAGGACCGGCGCAAGATTGAATCAATGGAACAAGGAAGA
CGGGAGGCTGTAGTCGAGTTTCAGCAACGCAGAACCTTGGCCTGGACGAC
AGGGCCACGTCGCGAGCACGCAGACGACCGACACATTCAGAATGCGGGAG
AGACGGTGTACCTGATCTCGCACCCGACTCATGCGTGGCAGTAGCGATGC
GAGCACAACTGACGCCTATCCAAGGCGTCGCTCGGACCAACACAGGGGAG
CGAGATGTGACTGGCTCGACGGGGACCACGGGGCGGGGGGACGGTGCTCT
AGGATGTGGTGGTGGCGGCGAGCGGGTCGGACCCGGGGACGGGGATGCTT
TGATCACATCGCGTTGTGCAGGCGCCGGAAGAGATGTGTCCCCTACCTCT
AGCCAGGGGCACCACCATACCCGTGCGTCTTGTCGCTTTGTCCTTGAGGA
CCGGCGCAAGATTGAATCAATGGAACAAGGAAGACGGGAGGCTGTAGTCG
AGGCGAATCGTCTTCGGAACAAGGTGGTGCACCTCGAAACACAGGTGGCC
GATGCCGTGGTCGGCAGGGCCCATGCGGTGGCTGAAGCAACACGAAAGGT
CGAGGAAGAATACACGAAAATTATTCAGGCGAATCGTCTTCGGAACAAGG
TGGTGCACCTCGAAACACAGGTGGCCGATGCCGTGGTCGGCAGGGCCCAT
GCGGTGGCTGAAGCAACACGAAAGGTCGAGGAAGAATACACGAAAATTAT
TCAGGCCCTCCGCGATGAGCTCGGTCCACCGTCAAGGATTTTAAAAGAAA
GCAAAGGCGCCTATGAGGCCGTGTGCGAGGAACGGAAAGCACTTCGGCAG
CAGGCCCTCCGCGATGAGCTCGGTCCACCGTCAAGGATTTTAAAAGAAAG
CAAAGGCGCCTATGAGGCCGTGTGCGAGGAACGGAAAGCACTTCGGCAGC
AGGCGCAGAAGAGGGAAATGGTAGGCACGATAGCTCCAGGACCAGCGGGC
TGGATGTTGGACGAAGGAGAGGTGGACGGCCACATGAACTTATGGGAACT
AACAAATGAGGGGGCGGGGGAGAAGGCCGTGTCGCCCCTTGTATCCCTAC
ATATGTCGACGGTAGCAATCAAACCCGAGGATTAGGCGCAGAAGAGGGAA
ATGGTAGGCACGATAGCTCCAGGACCAGCGGGCTGGATGTTGGACGAAGG
AGAGGTGGACGGCCACATGAACTTATGGGAACTAACAAATGAGGGGGCGG
GGGAGAAGGCCGTGTCGCCCCTTGTATCCCTACATATGTCGACGGTAGCA
ATCAAACCCGAGGATTAG
back to top