mRNA_S-dermatodea_contig9651.17660.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9651.17660.1
Unique NamemRNA_S-dermatodea_contig9651.17660.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A6H5L6M0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M0_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 2.750e-109
Identity = 206/309 (66.67%), Postives = 234/309 (75.73%), Query Frame = 1
Query:    1 MKVVVVGLSWLVGASTVAGFVSHVTPTFVHRSLRPPRTPESHRSSRSHRPIS--QCSSLLMGQRERLEQYGGEKEGLARKGQGLPRLPKLAGGQKVALLVGAAAATSQILPHAAVAA-EATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEKTPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            MK   +GL+   G + V+GFVSHV P     S        S    R +RP +    S+L M +     +  GE+    R      R+    G  KVALL  A A + Q+LPHAAVAA E  +P+ SAA+ G+  ++LT+SGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVP+VFTSGLPLDDI+AA AFLYFGI TLKDAY LP+DSN+GI+EERAEAEESVKEL+ +KT WALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVA+GAI AHASATG
Sbjct:    1 MKASAIGLACFAGIAHVSGFVSHVIPRGSRVSHDVSSLVASRPLPRPYRPTAGRANSNLFMKKGGAHLREHGERN---RTRHLTSRIGHPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATG 306          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: D8LPN6_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN6_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 6.830e-77
Identity = 162/275 (58.91%), Postives = 190/275 (69.09%), Query Frame = 1
Query:    1 MKVVVVGLSWLVGASTVAGFVSHVTP------------TFVHRSLRPPRTPESHRSSRSHRPISQCSSLLMGQRERLEQYGGE---KEGLARKGQGLPRLPKLAGG-QKVALLVGAAAATSQILPHAAVAA-EATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEKTPW 774
            MK   +GL+   G + V+GFV HV P                R L  P  P + R++         SSL M +       GG    ++G   + + L  L    GG  KVALL  A A + Q+LPHAAVAA E  +P+ SAA+ G+  ++LT+SGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVP+VFTSGLPLDDI+AA AFLYFGI TLKDAY LP+DSN+GI+EERAEAEESVKEL+ +KT W
Sbjct:    1 MKASAIGLACFAGIAHVSGFVPHVIPRGSRASHDVSSLVVASRPLPRPYRPTAGRAN---------SSLFMNK-------GGAHLGEDGERNRTRHLSSLMGHPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVW 259          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: W7TMF8_9STRA (GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.220e-64
Identity = 145/283 (51.24%), Postives = 182/283 (64.31%), Query Frame = 1
Query:  118 ESHRSSRSHRPI----SQCSSLLMGQRE--RLEQYGGEKEGLARKGQGLPRLPKLAGGQKVALLVGAAAATSQI-----LPHAAVAAEATLPLVSAAMGGSFFD---KLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQ--DEKTPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            ESH     H P+     Q S+ +   ++   L ++  EK G   +  G      +  G K    VG A A + I     +P  A AA A+L  ++A    S+ +   KL  SGF QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+ AL+VMT+++VL+G AFH++P     G   D  VA  AF YFG+ TLKD+Y + +  + G+DEERAEAE++V+E    + +TPW  ILQ FSLVFAAEFGDRSFL+TIALGAAQNPF VATGAI AHA+ATG
Sbjct:   64 ESHEREGQHAPLYFWKEQHSATIAASKQLHMLTKHSEEKHGAVERSLG----GVIVKGFKKVGAVGLAVALTGIVLIAGMPIGAHAASASLADLTAGASLSYNNVVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFTGSMAALSVMTIISVLIGQAFHAIPQGLGGGFKFDQWVAVAAFSYFGLKTLKDSYDMADGDSSGVDEERAEAEKAVQESSAPERRTPWGTILQIFSLVFAAEFGDRSFLSTIALGAAQNPFSVATGAIGAHATATG 342          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A836CPU7_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU7_9STRA)

HSP 1 Score: 214 bits (545), Expect = 6.820e-64
Identity = 134/219 (61.19%), Postives = 154/219 (70.32%), Query Frame = 1
Query:  289 LVGAAAATSQILPHAAVAA-EATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEK--------TPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            LV A A  S  LP AA AA  A  PL  A   G+   + T++GF QAFSLVFVSEIGDKTFFIA LLAAKTSRLISFAGS+ AL+VMTVL+ L+G+AFHSVP+  T+G+P DD +A  AFLYFG+VTL+DA Q+P+D N G++ E A                     +  ALI QTF LVFAAEFGDRSFLTTIAL AAQNP  VA GAIAAHASATG
Sbjct:  100 LVAAVALLSHALPAAAAAAVTAGAPLTGAIADGTL-TEATSNGFVQAFSLVFVSEIGDKTFFIAGLLAAKTSRLISFAGSIAALSVMTVLSCLIGVAFHSVPSTLTNGIPFDDYIAVAAFLYFGLVTLRDASQIPDDDNSGMEAEAAXXXXXXXXXXXXXXXXXXGAPSTLALIAQTFGLVFAAEFGDRSFLTTIALSAAQNPISVAGGAIAAHASATG 317          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A7S1FYG6_9STRA (GDT1 family protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYG6_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.270e-59
Identity = 123/215 (57.21%), Postives = 151/215 (70.23%), Query Frame = 1
Query:  277 KVALLVGAAAATSQILPHAAVAAEATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVK--ELQDEKTPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASAT 915
            K A    AA A S IL  +   A   +  ++ A   SF +   ++GF+QAFSLVF+SEIGDKTFFIA LLA KTS+ +SF GS+GALAVMTV++ +LG  FH+VP+  T GLPLDD+ A VAF +FG  TLKD+Y L ED    +DEE A+AE++V+  E   + TPW  I+ TF LVFAAEFGDRSFL+TIAL AAQNPF V  GAIA HA AT
Sbjct:  111 KTAGAAAAAFAASSILASSPAHA-IDVATIAGAPAASFIESFASTGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSKFVSFVGSLGALAVMTVISCILGQIFHAVPSGITQGLPLDDVAAVVAFAFFGFKTLKDSYDL-EDGESVMDEELADAEDAVEGSETIKQVTPWGQIISTFGLVFAAEFGDRSFLSTIALSAAQNPFSVCGGAIAGHALAT 323          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A7S2U7L4_9STRA (GDT1 family protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7L4_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.280e-59
Identity = 116/177 (65.54%), Postives = 136/177 (76.84%), Query Frame = 1
Query:  394 DKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEK--TPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            D L+ +GF+QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+GALAVMT+++VL+G  FH+VP+  + GLPLDDI A  AF +FGI TLK+A ++ E+    +DEE A+AEE+V+     K  T W  I   F LVFAAEFGDRSFL TIALGAAQNP  VA GAIAAHA ATG
Sbjct:  157 DSLSQTGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFIGSIGALAVMTIISVLIGQIFHAVPSGLSQGLPLDDIAAVAAFAFFGIKTLKEAIEMDEEGVSAMDEEFADAEEAVEGSDSIKQITAWGKIASIFGLVFAAEFGDRSFLATIALGAAQNPVSVAGGAIAAHAMATG 333          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A7S2HML6_9STRA (GDT1 family protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HML6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.510e-59
Identity = 128/234 (54.70%), Postives = 160/234 (68.38%), Query Frame = 1
Query:  244 LPRLPKLAGGQKVALLVGAAAATSQIL--PHAAVAAEATLPLVS------AAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQD--EKTPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASAT 915
            L  +P      K  ++  AA  T+  L  P A+ A+  TL  VS      AA   SF +K+  +GF+QAFSLVFVSEIGDKTFFIA LLA KTSR +S  GSVGALAVMT+++VL+G  FH+VP+    G+PLDD+ A +AF +FG  TLK+++ + E+    +DEE AEAEE+V+E     ++T WA I  TF LVFAAEFGDRSFL+TIAL AAQNP  VA GAIAAHA AT
Sbjct:   88 LSSIPSWVNAHKKGIITSAAILTAAALTIPSASFASP-TLAEVSTNGEALAASASSFMEKVAETGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRFVSLVGSVGALAVMTIISVLIGQIFHAVPSGIAQGIPLDDVAAVLAFAFFGFKTLKESFDM-EEGESVMDEELAEAEETVEESDTIRQRTAWAQIASTFGLVFAAEFGDRSFLSTIALSAAQNPVSVAGGAIAAHAIAT 319          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A7S1CXU9_CYCTE (GDT1 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXU9_CYCTE)

HSP 1 Score: 199 bits (507), Expect = 1.690e-58
Identity = 114/185 (61.62%), Postives = 141/185 (76.22%), Query Frame = 1
Query:  370 AAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEK--TPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            A+   S FD LT +GF+QAFSLVF+SEIGDKTFFIA LLA KTSR++S+ GS+GALAVMT+L+VL+G  FH+VP     G+PLDD+ A +AF +FG+ TLK+A ++  D +  +DEE AEAEE+V+     K  T WA I+ TF LVFAAEFGDRSFL+TIAL AAQNP  VA GA+AAH  ATG
Sbjct:  110 ASTAASLFDSLTETGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRVVSYLGSMGALAVMTILSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFAFFGLKTLKEAIEMDSDGST-MDEEFAEAEETVEGSNTVKQSTAWAQIVSTFVLVFAAEFGDRSFLSTIALSAAQNPLSVAGGAVAAHGLATG 293          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A6S9LQ96_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LQ96_HETAK)

HSP 1 Score: 192 bits (489), Expect = 1.350e-55
Identity = 115/181 (63.54%), Postives = 124/181 (68.51%), Query Frame = 1
Query:  394 DKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEKT------PWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            ++LT+SGFFQAFSLVFVSEIGDKTFFIA LLA KTS+ IS                L+G  FH VP   T GLPLDD  A  AFLYFG+ TLKDA  LP   N G++EE  EAEE V+  Q          P ALI QTF LVFAAEFGDRSFLTTIALGAAQNPF VA GAIAAHASATG
Sbjct:  131 EQLTSSGFFQAFSLVFVSEIGDKTFFIAGLLAMKTSKFISXXXXXXXXXXXXXXXXLIGQVFHQVPPELTQGLPLDDYAAVAAFLYFGLKTLKDAAALPSGDNSGVEEELEEAEEEVEAFQKAAADRGAGAPLALIAQTFGLVFAAEFGDRSFLTTIALGAAQNPFAVAAGAIAAHASATG 311          
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Match: A0A7S2K988_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K988_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.920e-55
Identity = 122/225 (54.22%), Postives = 156/225 (69.33%), Query Frame = 1
Query:  256 PKLAGGQKVALLVGAAA--ATSQILPHAAVAAEATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVFTSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKELQDEK--TPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAAHASATG 918
            P +   +  A+LV AAA  A   + P  + A ++     ++AM G F    + SGF+QAFSLVF+SEIGDKTFFIA LLA KTSRL+SF GS+GALA MTVL+VL+G  FH+VP     G+PLDD+ A +AF +FG+ TLK+A  +  ++   +DEE  EA+E+V+  Q  K  T W  I+ TF+LVFAAEFGDRSFL+TIAL AAQNPF V  GA+AAH  ATG
Sbjct:  145 PGIISRRSTAVLVSAAAIAAVFFMTPLPSYALDSMSVADASAMVGRF----SESGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRLVSFIGSMGALAAMTVLSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFTFFGLKTLKEASDMDPEAGSVMDEEFEEAQEAVEGSQTIKEITAWGQIVSTFALVFAAEFGDRSFLSTIALSAAQNPFSVGFGAVAAHGIATG 365          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9651.17660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6M0_9PHAE2.750e-10966.67GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LPN6_ECTSI6.830e-7758.91GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
W7TMF8_9STRA1.220e-6451.24GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A836CPU7_9STRA6.820e-6461.19GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S1FYG6_9STRA1.270e-5957.21GDT1 family protein n=1 Tax=Corethron hystrix TaxI... [more]
A0A7S2U7L4_9STRA2.280e-5965.54GDT1 family protein n=2 Tax=Attheya septentrionali... [more]
A0A7S2HML6_9STRA4.510e-5954.70GDT1 family protein n=1 Tax=Helicotheca tamesis Ta... [more]
A0A7S1CXU9_CYCTE1.690e-5861.62GDT1 family protein n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A6S9LQ96_HETAK1.350e-5563.54GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S2K988_9STRA1.920e-5554.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9651contigS-dermatodea_contig9651:1232..3278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score247.7
Seed ortholog evalue7.2e-63
Seed eggNOG ortholog2880.D8LPN6
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.Golgi calcium ion transport
EggNOG OGsCOG2119@1,KOG2881@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionUncharacterised protein family UPF0016
Ec32 orthologEc-18_001880.1
Exons2
Model size918
Cds size918
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925423.0016413-CDS-S-dermatodea_contig9651:1231..20041622925423.0016413-CDS-S-dermatodea_contig9651:1231..2004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9651 1232..2004 +
1694079923.1123118-CDS-S-dermatodea_contig9651:1231..20041694079923.1123118-CDS-S-dermatodea_contig9651:1231..2004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9651 1232..2004 +
1622925423.0128193-CDS-S-dermatodea_contig9651:3133..32781622925423.0128193-CDS-S-dermatodea_contig9651:3133..3278Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9651 3134..3278 +
1694079923.1299262-CDS-S-dermatodea_contig9651:3133..32781694079923.1299262-CDS-S-dermatodea_contig9651:3133..3278Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9651 3134..3278 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9651.17660.1prot_S-dermatodea_contig9651.17660.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9651 1232..3278 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9651.17660.1

>prot_S-dermatodea_contig9651.17660.1 ID=prot_S-dermatodea_contig9651.17660.1|Name=mRNA_S-dermatodea_contig9651.17660.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=306bp
MKVVVVGLSWLVGASTVAGFVSHVTPTFVHRSLRPPRTPESHRSSRSHRP
ISQCSSLLMGQRERLEQYGGEKEGLARKGQGLPRLPKLAGGQKVALLVGA
AAATSQILPHAAVAAEATLPLVSAAMGGSFFDKLTTSGFFQAFSLVFVSE
IGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPTVF
TSGLPLDDIVAAVAFLYFGIVTLKDAYQLPEDSNEGIDEERAEAEESVKE
LQDEKTPWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVATGAIAA
HASATG
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mRNA from alignment at S-dermatodea_contig9651:1232..3278+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9651.17660.1 ID=mRNA_S-dermatodea_contig9651.17660.1|Name=mRNA_S-dermatodea_contig9651.17660.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2047bp|location=Sequence derived from alignment at S-dermatodea_contig9651:1232..3278+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAAGTTGTGGTGGTTGGGCTGAGTTGGTTAGTCGGTGCCTCCACCGT GGCGGGTTTTGTGTCGCACGTGACCCCGACATTCGTCCACCGCTCGTTGC GCCCGCCAAGGACTCCGGAATCGCATCGGTCATCTCGGTCCCATCGACCA ATATCCCAGTGCAGCAGCTTGCTTATGGGGCAGAGGGAAAGGCTGGAGCA GTATGGTGGAGAAAAAGAGGGACTTGCTCGAAAGGGGCAAGGATTGCCGC GGCTGCCCAAGCTGGCCGGTGGTCAAAAGGTGGCTCTGCTGGTGGGAGCG GCGGCAGCTACGAGCCAAATCCTGCCTCATGCAGCGGTAGCGGCAGAGGC AACTCTCCCACTGGTGTCTGCGGCCATGGGTGGCTCTTTTTTCGACAAAC TGACAACCTCTGGTTTTTTCCAAGCCTTCTCTCTCGTTTTTGTGTCGGAA ATAGGGGACAAGACGTTCTTCATCGCCGCCCTGTTGGCCGCGAAAACGTC GCGCCTCATCTCGTTCGCGGGGTCGGTTGGGGCCCTTGCGGTCATGACAG TGCTCGCTGTGCTCTTGGGCCTGGCGTTTCACTCTGTGCCGACCGTGTTC ACGTCAGGCCTACCTCTTGATGACATTGTTGCAGCAGTAGCCTTCCTCTA CTTTGGTATCGTCACGCTGAAAGATGCGTATCAACTCCCGGAAGACTCGA ACGAGGGCATTGACGAGGAGCGAGCCGAGGCCGAGGAGAGCGTCAAGGAG CTCCAGGACGAGAAAACTCCCTGGTGAGCTTTTTCATACTGCTGTGCGTC CGGCCTGACAATCATGGGAGTATTGCAGATATCTCAATGCTGTAAACATG TCCTCAAAATCTTGCATGAGCGTGCAGCGCATCTATGCATGCATCCGGCA TGGTATACTTGCTGCACTGAAGCAGGAGACACGCTAGTGCAGTTGAACTC TCGGACCGAACAAAAACAACGGAGAGCTTGTACTTGTATTGGTTTTGCGA GTCGCAGGGACGGGTTGTGATGTTTGATAATCCCTCAAATATCTCTTAAC CCCTCCCTGCTTCCCCATCGAGGTGGGTCCGATGTGTACGTGGCGTGGAT CTAGAGGAGCAATTGATATGTCTCCCTTTACACTAGGAAAGTCGAAATGA CGACCTCGTCGGGAAGATGGCCCCAGCAATGGCAAACCAGCGCCCTTGCA AGTCGGATCAAGATATCCGCACATATACTACTACTGTTGTACAGCGATTG TGGCAGAATGGTTGAGAGCACTTTGAAATCGAGCTTGTCAAGGGTCAACT GTCAACCGCTGGATCCCGTACTTGTAATAAGTTGGCGTGCGCATGGATGC CCATGCGGTATGTGCGCTATGTATAAAGATAGTAAAACGCTGCCAAAAAA GAATATGTCCCCTCCACAGGGCGTGTCCCAAAAATGCGAGGCAATTGTAG CAACGAACGGGTATATTTTACGCACTGGTTGGGGAATGAAGGCCCGGAGA CTTTCTTCAGTGGCTCGTGCACGTTTCCACCTGTTGTTCTGATGGAAGCT TTGATGCAAGATCGTACGTTTCGGTGCGCTCTGGATGACACCTCATCATG TAGAACGTCTCTGCGTGACACCCAATATGTACGGAAGGCGCTTTTTCTTT TTTGTGGGTTTGCCGCGGTCAATATCGTCTAAAATTATTTTCTGCACGCG TTGTCCCTAGCTCTAACTATCCGGCGAAACAATGACAAACAAGAACAGTT CAACGTGCCTGATTGCAAATTGGCCTTGGTTTCGCTTGTACTGTGTATGC TCGTTTTTTGTCGTAAGGGTAGTCACCATGTGCCAGTGAATACTCTCGCT TGTGTCTCACAAGCGTGCTCTTTTCGTTGCCGATCTGCCCTGTGCGCGAC AGGGCTCTAATTTTGCAGACGTTTTCGTTGGTATTCGCGGCGGAGTTCGG GGATCGATCCTTCCTAACCACCATCGCTTTGGGCGCAGCGCAGAATCCGT TTGGTGTTGCAACAGGAGCGATTGCTGCACATGCATCGGCAACCGGT
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Coding sequence (CDS) from alignment at S-dermatodea_contig9651:1232..3278+

>mRNA_S-dermatodea_contig9651.17660.1 ID=mRNA_S-dermatodea_contig9651.17660.1|Name=mRNA_S-dermatodea_contig9651.17660.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at S-dermatodea_contig9651:1232..3278+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAAGTTGTGGTGGTTGGGCTGAGTTGGTTAGTCGGTGCCTCCACCGT
GGCGGGTTTTGTGTCGCACGTGACCCCGACATTCGTCCACCGCTCGTTGC
GCCCGCCAAGGACTCCGGAATCGCATCGGTCATCTCGGTCCCATCGACCA
ATATCCCAGTGCAGCAGCTTGCTTATGGGGCAGAGGGAAAGGCTGGAGCA
GTATGGTGGAGAAAAAGAGGGACTTGCTCGAAAGGGGCAAGGATTGCCGC
GGCTGCCCAAGCTGGCCGGTGGTCAAAAGGTGGCTCTGCTGGTGGGAGCG
GCGGCAGCTACGAGCCAAATCCTGCCTCATGCAGCGGTAGCGGCAGAGGC
AACTCTCCCACTGGTGTCTGCGGCCATGGGTGGCTCTTTTTTCGACAAAC
TGACAACCTCTGGTTTTTTCCAAGCCTTCTCTCTCGTTTTTGTGTCGGAA
ATAGGGGACAAGACGTTCTTCATCGCCGCCCTGTTGGCCGCGAAAACGTC
GCGCCTCATCTCGTTCGCGGGGTCGGTTGGGGCCCTTGCGGTCATGACAG
TGCTCGCTGTGCTCTTGGGCCTGGCGTTTCACTCTGTGCCGACCGTGTTC
ACGTCAGGCCTACCTCTTGATGACATTGTTGCAGCAGTAGCCTTCCTCTA
CTTTGGTATCGTCACGCTGAAAGATGCGTATCAACTCCCGGAAGACTCGA
ACGAGGGCATTGACGAGGAGCGAGCCGAGGCCGAGGAGAGCGTCAAGGAG
CTCCAGGACGAGAAAACTCCCTGATGAAAGTTGTGGTGGTTGGGCTGAGT
TGGTTAGTCGGTGCCTCCACCGTGGCGGGTTTTGTGTCGCACGTGACCCC
GACATTCGTCCACCGCTCGTTGCGCCCGCCAAGGACTCCGGAATCGCATC
GGTCATCTCGGTCCCATCGACCAATATCCCAGTGCAGCAGCTTGCTTATG
GGGCAGAGGGAAAGGCTGGAGCAGTATGGTGGAGAAAAAGAGGGACTTGC
TCGAAAGGGGCAAGGATTGCCGCGGCTGCCCAAGCTGGCCGGTGGTCAAA
AGGTGGCTCTGCTGGTGGGAGCGGCGGCAGCTACGAGCCAAATCCTGCCT
CATGCAGCGGTAGCGGCAGAGGCAACTCTCCCACTGGTGTCTGCGGCCAT
GGGTGGCTCTTTTTTCGACAAACTGACAACCTCTGGTTTTTTCCAAGCCT
TCTCTCTCGTTTTTGTGTCGGAAATAGGGGACAAGACGTTCTTCATCGCC
GCCCTGTTGGCCGCGAAAACGTCGCGCCTCATCTCGTTCGCGGGGTCGGT
TGGGGCCCTTGCGGTCATGACAGTGCTCGCTGTGCTCTTGGGCCTGGCGT
TTCACTCTGTGCCGACCGTGTTCACGTCAGGCCTACCTCTTGATGACATT
GTTGCAGCAGTAGCCTTCCTCTACTTTGGTATCGTCACGCTGAAAGATGC
GTATCAACTCCCGGAAGACTCGAACGAGGGCATTGACGAGGAGCGAGCCG
AGGCCGAGGAGAGCGTCAAGGAGCTCCAGGACGAGAAAACTCCCTGGGCT
CTAATTTTGCAGACGTTTTCGTTGGTATTCGCGGCGGAGTTCGGGGATCG
ATCCTTCCTAACCACCATCGCTTTGGGCGCAGCGCAGAATCCGTTTGGTG
TTGCAACAGGAGCGATTGCTGCACATGCATCGGCAACCGGTGGCTCTAAT
TTTGCAGACGTTTTCGTTGGTATTCGCGGCGGAGTTCGGGGATCGATCCT
TCCTAACCACCATCGCTTTGGGCGCAGCGCAGAATCCGTTTGGTGTTGCA
ACAGGAGCGATTGCTGCACATGCATCGGCAACCGGT
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