mRNA_S-dermatodea_contig9640.17653.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9640.17653.1
Unique NamemRNA_S-dermatodea_contig9640.17653.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 2.130e-90
Identity = 154/201 (76.62%), Postives = 177/201 (88.06%), Query Frame = 1 
Query:  520 SEAEEDNKPEYHEEAPPQQSAMNAVLRSMKRRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHYRAARTMPDETEAMEVPSRGG 1122
            SEAEEDN PE   +AP ++SAM AVL SMK+RKAQ+LSTAEREQIAQEFMFKINQAAEDDEEAV  G+PA+ K+KM+++VKATLAKKELQETFLEFDLLGV+KRWLQPYSNG LPNLT+R ++L ++  LPVQVDHLKRSGIGKVVMGLLNC+EET ENK  LR+LVS+WNRPVYEKE +YRA R   D+ EAMEVP+RGG
Sbjct:  326 SEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGG 526
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN)

HSP 1 Score: 152 bits (385), Expect = 5.460e-37
Identity = 94/225 (41.78%), Postives = 137/225 (60.89%), Query Frame = 1 
Query:  394 EEMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSAMNAVLRSMK--RRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            +E  +G    RTREDD+FID  DD AD+L EY  +      +   E+D +     +    +      L+S+K  RR   +LS  E+EQI QE ++++++A  DD  ++   +PAL ++K +      L K +LQ TFL+FDLL  +K+W+QP  +G LPNL +R ++L +V  LPV  +HLKRSG GKVVM L    EETRENK + R+L+ RW+R V+EK + Y
Sbjct:  651 DEYDSGDEVVRTREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDPRQPGRTK---DEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDY 872
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL)

HSP 1 Score: 147 bits (370), Expect = 1.860e-35
Identity = 93/219 (42.47%), Postives = 132/219 (60.27%), Query Frame = 1 
Query:  424 RTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEED----NKPEYHEEAPPQQSAMNAVLRSMK--RRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            RT++DD FID  DD  D+L EY  D      +    ED     + +Y EE           L+S+K  RR    LS  E+EQI QE ++++++A  DD  ++   KPAL ++K +      L K++LQ TFL+FDLL  +K+W+QP  +G LPNL +R +ML +V  LPV  +HLKRSG GKVVM L    EETR+NK + R+L+ RW+R V++K + Y
Sbjct:  300 RTKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVGGRKEEDYFEE----------TLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDY 508
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: F0WGB7_9STRA (Uncharacterized protein AlNc14C90G5648 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGB7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.780e-34
Identity = 89/243 (36.63%), Postives = 138/243 (56.79%), Query Frame = 1 
Query:  373 PGALGDEEEMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSAMNAV----------LRSMK---RRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            P    D +E  +G   A T+EDDDFID  DD AD+L EY              E  K ++ +E P  +    AV          L+S+K   R     LS  + E++ QE +F++++A  +D+ A+ +G+PA  K+K +      + K+ LQ   L+FDLL ++++W+QP  +G LPNL +R +M+++V  LP+  +HLKRSG GKV+M L    +ET ENK + RE++ RW+R V+ K + Y
Sbjct:   91 PQRRNDADEYDSGEEAAPTKEDDDFIDREDDLADVLGEY--------------EQEKQQFDDERPVDRVEQEAVFEEDTYFDDTLKSLKTGRRSSKMNLSIQDMERVTQELLFQMDKAWAEDQNAISSGRPAFAKIKFVDHALQIMRKQRLQPMLLDFDLLSIIRKWIQPLGDGALPNLGMRTKMISMVHRLPIYKEHLKRSGFGKVIMTLWKHSDETPENKELCREMIDRWSRSVFNKILDY 319
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.020e-34
Identity = 88/231 (38.10%), Postives = 138/231 (59.74%), Query Frame = 1 
Query:  379 ALGDEEEMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSAMNAVLRSMKRRKAQE---LSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            A G+ +E  +G    RT+EDD FIDN DD  D+L EY +D      D   +ED++P    +  P     +  L+S+K  +A+    LS  E E + QE ++++++A  DD +A+   +PAL KLK +      + K +LQ   L+FDLLG++K+W+QP  +G LPNL++R +ML +   +P+  +HLKRS  GK +M L    +ET ENK + R+++ RW+R V+ K + Y
Sbjct:   86 AAGEGDEYDSGEEAVRTKEDDAFIDNDDDLDDVLNEYGNDKQEF-HDERPDEDDEPSSRRQREPDY--FDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDY 313
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.580e-34
Identity = 78/165 (47.27%), Postives = 107/165 (64.85%), Query Frame = 1 
Query:  604 MKRRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSN-GHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHYRAARTMPDETE 1095
            MKR + Q+LS AER+  AQ+FM  ++ AA +DE  V  GKPA  K+K LK V+ TL+K++L ET LE DLL  VK+W+ PY   G LP+L +RK M AI++ LPV+ +HLKRS +G  +M +    EET ENK  L +L+ +W RP+Y K    R    + +E E
Sbjct:    1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEEIE 165
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC)

HSP 1 Score: 139 bits (350), Expect = 1.160e-33
Identity = 85/223 (38.12%), Postives = 134/223 (60.09%), Query Frame = 1 
Query:  424 RTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEY---HEEAPPQQSA----MNAVLRSMKRRKAQE---LSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            R++ DD FIDN DD  D+L+EY       G+D +   D +P+     +EAP +Q       +  ++ +K  +A+    LS  + E I QE ++++++A  DD +A+   +PAL KLK +      + K +LQ   L+FDLLG++K+W+QP  NG LP+L++R +ML +   +P+  +HLKRSG GKVVM L    +ET ENK + R ++ RW+R V+ K + Y
Sbjct:  100 RSKADDAFIDNDDDLDDVLDEY-------GNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMKGLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDY 315
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP)

HSP 1 Score: 138 bits (347), Expect = 2.340e-33
Identity = 89/231 (38.53%), Postives = 133/231 (57.58%), Query Frame = 1 
Query:  397 EMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAP------PAGSDSEAEEDNKPEYHEEAPPQQSAMNAVLRSMKRRKAQ---ELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            E  +G     T+EDDDFID  DD AD+L EY  D        P G + E  +  K ++           +  L+S+K  +++    LS  E EQI QE ++++++A  DD  ++   +PAL K+K +      L K + Q   L+FDLL +VK+W+QP  +G LPN+ +R +ML +V  +PV  +HLKRSG+GKVVM L+   +ET ENK + R LV RW+R V+ K + +
Sbjct:   74 EYDSGEEAVATKEDDDFIDGDDDLADVLGEYDDDRQQFDDERPLGDEPEQTQQQKDDF----------FDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDF 294
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A3R7FXH1_9STRA (TFIIS N-terminal domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FXH1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.990e-33
Identity = 93/229 (40.61%), Postives = 135/229 (58.95%), Query Frame = 1 
Query:  391 EEEMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSA--MNAVLRSMKRRKAQE---LSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            E+E  +G     T+EDDDFID  DD AD+L EY         D +  +D +P    E P  Q     +  L+S+K  +A+    LS  E EQI QE ++++++A  DD  ++   +PAL K+K +      L K + Q   L+FDLL +VK+W+QP  NG LPN+ +R +ML +V  +PV  +HLKRSG+GKVVM L+   +ET ENK + R LV RW+R V+ K + +
Sbjct:  584 EDEYDSGEEAMATKEDDDFIDGDDDLADVLGEYD-------QDQQQFDDERPLDEPELPTAQKLDFFDETLKSLKTGRARSKVNLSPQEMEQITQEVLYRMDKAYADDLASIEQRRPALEKIKFMDSALHILRKLQFQPMLLDFDLLTIVKKWIQPLENGTLPNVGLRTKMLDMVSKMPVFKEHLKRSGLGKVVMILMKHPQETLENKELCRSLVERWSRSVFNKTLDF 805
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BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.550e-33
Identity = 85/226 (37.61%), Postives = 135/226 (59.73%), Query Frame = 1 
Query:  394 EEMGAGAGEARTREDDDFIDNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSAMNAVLRSMKR---RKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKMLKMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIVMMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEKEMHY 1062
            +E  +G    RT++D+ FID+ DD   +L+EY  D      +   EE+++     EA   +   +  ++SMK    R   ++S  E E + QE ++ +++A  DD  A+   +PAL KLK++  V   + K +LQ+  L+FDLLGV+K+W+QP  NG LPNL +R +M+ I   LP+  +HLKRSG GKV+M L    +E+ ENK + R+L+ RW+R V+ K + +
Sbjct:   87 DEYDSGEEVERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEEDRFTRRREA---EDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDF 309
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9640.17653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK3_ECTSI2.130e-9076.62TFIIS N-terminal domain-containing protein n=2 Tax... [more]
A0A2D4BW91_PYTIN5.460e-3741.78Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A8K1CB40_PYTOL1.860e-3542.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WGB7_9STRA1.780e-3436.63Uncharacterized protein AlNc14C90G5648 n=1 Tax=Alb... [more]
A0A1V9ZKU1_9STRA2.020e-3438.10TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A835YPY7_9STRA2.580e-3447.27TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A067C2C7_SAPPC1.160e-3338.12TFIIS N-terminal domain-containing protein n=3 Tax... [more]
G5AGW9_PHYSP2.340e-3338.53TFIIS N-terminal domain-containing protein n=11 Ta... [more]
A0A3R7FXH1_9STRA2.990e-3340.61TFIIS N-terminal domain-containing protein n=3 Tax... [more]
A0A485LKM7_9STRA5.550e-3337.61Aste57867_22366 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9640contigS-dermatodea_contig9640:3928..8440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.1
Seed ortholog evalue5.7e-78
Seed eggNOG ortholog2880.D8LRK3
Preferred nameIWS1
KEGG koko:K17498
GOsGO:0000414,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0001076,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007154,GO:0007165,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010793,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016458,GO:0016973,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0030702,GO:0031056,GO:0031060,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032268,GO:0032386,GO:0032774,GO:0032784,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033157,GO:0033993,GO:0034243,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035065,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043933,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048519,GO:0048523,GO:0048545,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060303,GO:0060341,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070827,GO:0070887,GO:0071166,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090239,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1901701,GO:1901983,GO:1902275,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2000197,GO:2000756,GO:2001141,GO:2001253
EggNOG free text desc.regulation of histone H3-K36 trimethylation
EggNOG OGsCOG5139@1,KOG1793@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranscription factor IIS, N-terminal
Ec32 orthologEc-12_000120.1
Exons6
Model size1132
Cds size1131
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9640.17653.1prot_S-dermatodea_contig9640.17653.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9640 3929..8440 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925422.4203017-CDS-S-dermatodea_contig9640:3928..40781622925422.4203017-CDS-S-dermatodea_contig9640:3928..4078Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 3929..4078 -
1694079922.6446557-CDS-S-dermatodea_contig9640:3928..40781694079922.6446557-CDS-S-dermatodea_contig9640:3928..4078Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 3929..4078 -
1622925422.430571-CDS-S-dermatodea_contig9640:4552..46931622925422.430571-CDS-S-dermatodea_contig9640:4552..4693Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 4553..4693 -
1694079922.6552618-CDS-S-dermatodea_contig9640:4552..46931694079922.6552618-CDS-S-dermatodea_contig9640:4552..4693Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 4553..4693 -
1622925422.4409223-CDS-S-dermatodea_contig9640:5358..54451622925422.4409223-CDS-S-dermatodea_contig9640:5358..5445Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 5359..5445 -
1694079922.6635826-CDS-S-dermatodea_contig9640:5358..54451694079922.6635826-CDS-S-dermatodea_contig9640:5358..5445Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 5359..5445 -
1622925422.457935-CDS-S-dermatodea_contig9640:5846..60081622925422.457935-CDS-S-dermatodea_contig9640:5846..6008Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 5847..6008 -
1694079922.6736376-CDS-S-dermatodea_contig9640:5846..60081694079922.6736376-CDS-S-dermatodea_contig9640:5846..6008Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 5847..6008 -
1622925422.4705787-CDS-S-dermatodea_contig9640:6897..70291622925422.4705787-CDS-S-dermatodea_contig9640:6897..7029Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 6898..7029 -
1694079922.681947-CDS-S-dermatodea_contig9640:6897..70291694079922.681947-CDS-S-dermatodea_contig9640:6897..7029Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 6898..7029 -
1622925422.482882-CDS-S-dermatodea_contig9640:7981..84401622925422.482882-CDS-S-dermatodea_contig9640:7981..8440Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 7982..8440 -
1694079922.690504-CDS-S-dermatodea_contig9640:7981..84401694079922.690504-CDS-S-dermatodea_contig9640:7981..8440Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9640 7982..8440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9640.17653.1

>prot_S-dermatodea_contig9640.17653.1 ID=prot_S-dermatodea_contig9640.17653.1|Name=mRNA_S-dermatodea_contig9640.17653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=377bp
GGGGSAAGGKTLGRLRKGGGKGKGKGKGKGKKRRSEGEPGEGGDGGSSKS
KGKKKKGDKGKKKKSKKRKGETGDEDGEQERQPKKKAKKKAKKDKGGSAK
QLEDLGLLSSGDEEAEASDLDPVEPGALGDEEEMGAGAGEARTREDDDFI
DNTDDNADLLEEYQHDAPPAGSDSEAEEDNKPEYHEEAPPQQSAMNAVLR
SMKRRKAQELSTAEREQIAQEFMFKINQAAEDDEEAVVAGKPALNKLKML
KMVKATLAKKELQETFLEFDLLGVVKRWLQPYSNGHLPNLTIRKEMLAIV
MMLPVQVDHLKRSGIGKVVMGLLNCKEETRENKLVLRELVSRWNRPVYEK
EMHYRAARTMPDETEAMEVPSRGGSSA
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mRNA from alignment at S-dermatodea_contig9640:3928..8440-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9640.17653.1 ID=mRNA_S-dermatodea_contig9640.17653.1|Name=mRNA_S-dermatodea_contig9640.17653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4513bp|location=Sequence derived from alignment at S-dermatodea_contig9640:3928..8440- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGGGGGGGGGGTCGGCGGCGGGGGGCAAGACTCTGGGCCGTCTAAGGAA
AGGCGGCGGGAAGGGGAAGGGCAAGGGGAAGGGCAAGGGCAAGAAGCGCC
GGTCGGAGGGCGAGCCCGGCGAGGGGGGGGACGGAGGGTCGAGCAAGTCC
AAGGGCAAGAAGAAGAAGGGCGACAAGGGCAAGAAAAAGAAAAGCAAGAA
ACGAAAGGGGGAAACGGGCGACGAGGATGGCGAGCAGGAACGCCAGCCGA
AGAAGAAGGCCAAGAAGAAGGCCAAGAAGGATAAGGGCGGTAGCGCCAAG
CAGCTCGAGGATCTGGGGCTCTTGTCTTCGGGGGACGAGGAGGCGGAGGC
GTCAGACCTCGATCCCGTGGAACCCGGGGCGCTCGGCGACGAGGAGGAGA
TGGGCGCGGGGGCTGGGGAGGCCCGCACGCGGGAGGACGACGACTTCATC
GACAACACGGTAAGGGGCCTTTTTGGTGCGAGGTCAATTGAGCGTTTGCG
TTGGTCTTTGTTTTCGGGGAAGAGTACCAGTAAGAGTTATCATGAATCAT
GACGTTCTGCGCTCTGCTTAGGGTTTCGTGTTGTTCGGAGCCCAGGAGAA
AAGGGTGGTCGGATTGGGATGGTAAAGTATGGGGGGAAACTAATCGGCAG
TACTTTCGACCCCCACAGGCTCTATACTGTACTGTAGAGGGGAGCGGGCG
CACGCCTCTTGCGGCCTATTAATAGATTAGTAGTGCAAAGGAGAGTCCGT
CTGGTGCCCGGCGATTGGCCTCTAAGGTACTCCCCTGCCCAGTAACCTCA
GTTGTAGGCAGCTTTCGTCTCGCTTTTTCCTACCCGTATGAAAGGACCAG
GATAGAACAGCACGAGCAGATAAGTTCTTCGAGTCAAGGTCAACGAGGCG
CCATCCTGGGCCCGTGGAAACACACCAGCTCTGCTATCCGACTTCTCTGT
TTAGTGTACAATGCAAGTACACAGTATCCTCACTGATCCATGCTGAATCG
GGCCTGAAAGGGTCTTGCCGATCTCCTCTGTTGGTTTGTCCTTGCGTTTT
TGTGAATGCGGCAGTGCCTAGCTCGCTCACGTGCTCCGTGTTCCGTTATG
CACTGCTCTTTCTGAAGAGTTTGCCGCTCCCTCTTCACCCACTTTGGCTC
GACTCGGCTGCGGAGCGAGCGCCTGTGCTGACGCCGCTGCTGCGCTTGCC
AAGGGCGATGGGCTTCGGCGATCATTTTTGTGGTGTGTGTGGCCCTGCCG
TATTTCATTATCGTGAGAGCGTGTGTCCGCACCCTCGCAAATATGCGCAT
AACGGTCCATGTAGAGAGTCGGATGTGCTGTAGCTGCTTATGTAAATCTT
GGCGTTAATTGCTGAAGCTGACGGCGGCGCATGATGCCCCACACGCTTAC
ATGTACAACAGGACGACAACGCGGACCTGCTGGAAGAGTACCAGCACGAT
GCGCCCCCCGCCGGAAGCGACAGCGAGGCGGAGGAGGACAACAAGCCCGA
GTACCACGAGGAAGCCCCGCCGCAACAGAGCGCAATGAACGCGGTGAGTT
CCTTATTTTTTCCTTCTCATGGCTGTCTCTGTCTGTCGATTCCCTTTGTT
GGTTGGCGTGTCTCGGAAGGGTGAGCGATGGCAATGCCGGAACCGAAGCG
TCCTTGAGGGGAAAGCGCCGCCCGCCGTTCGTCATCGTAGCGATGGACAA
TTGAACCCGTAGACTATCACGAGGACGCCCCACCCCCCTGAAAACGATAA
AGATTTACAAACACAGAGAGAGCGAGCATTGGGGTCCAATCTTTTTGGGA
GAGGAAAATGTGGCCCAACTTAACTCAGTGGAGGCCTACGTTGTATATGA
TGCTATGGTGTTATTTTATTTTACCCCCCCCTATATAAGCTAGATAAAAT
TACTTCGGTCTAGGCCGAACACTCTTAGCAGGATGCAGCTCACCCTTCAT
GCGACTCNNNNNNNNNNGGGATGCGAGGTCTATGGTCTAACGACTACGGC
ATGCACGATCAATGAATGAGTACACCCCCCCCTCCCCTCCGTTGCCGGTA
CAAGAACCGTAATGTCTACATCGTGGCGGTGGACATGTCAAAGCTTGGTA
AGGTCGCGGTGAGGTGGCGAAAAATACCCATCAAGCAAGATAGCTTGAGG
ATATCTTGGCTTTCCCAATTTTTGGAAGTTCTTTTTTTCTAAGGCCGTGT
CCAACGATTCAACGCGTATGGCAAGCACTTCCGTACGCAGCGCCGGCACA
AAAAACGAAATTGCCGGGAGAATGTTTACCTGTTTCGGCACATGCATGAT
ACCACCCCACCTGTTCTTCGTCCGGCCGATCGTTAGCGTGTCCGTGACTA
CTCCGATCACGCACGTATACGCACGCACACCGCCCGTCCCCACGGGCTAA
GACAACAACCGCAACGCGCTGCACACACGCAGGTGCTAAGATCGATGAAG
CGGCGCAAGGCGCAGGAGCTGAGCACGGCGGAGCGGGAGCAGATCGCGCA
GGAGTTCATGTTCAAGATTAACCAGGCGGCCGAGGATGACGAGGAGGCCG
TTGTGGCCGGGAAGCCCGCTCTCAACAAGCTCAAGATGCTGAAGGTGAGG
GTGCGCGGGGTATACACAGCGGCGAGCGGCGTCTCTTTTTTGTTTTCCAA
TAACTTTTGGGCTCTCTCGCTTGCTGGGCTACGTATTGATAGGCAAGGCG
GCGTTGCGGGTGAGTGTCTGGTGTACTGGTGCGGTGTTTCCTACAAACCG
CGATGGGCTCGAGAGTATGCGGCCTGCTGCGCGCACGGAGACACGCGAAC
TCGCCCACGCAACAGCTCGTGCAGGGCTAGGCGAAATAGTAATACTGTTG
GTGTGGTGGTGTGCTACCCCGTGGCCACACCTCCTTCGTACCGACAGGTG
CCGCCTACACTCTTTTCTGCGTGTGTTGAGCACTCAGTTCGCTTCCTGTT
GAAACTCTGCTTGTTGGATTCGCACATGTGCGTGTAATGTACCAGATGGT
GAAGGCGACACTGGCGAAGAAGGAGCTCCAGGAAACCTTCCTCGAGTTCG
ACCTGCTCGGCGTGGTGAAGCGATGGCTGCAGGTGGGGGGGGTCACCCTA
CGGCAGTGCCGCGGTTTACGGGGTAGCAAGAATGTGGTGCTCGGGATGAG
CCTTTCGTTTGATGGCCCGTCCTTGCTCAGGAGTGTACCGTAGCGTGTGT
CTGTGTCACGGGCTTTCGTTTACGGCGCGTGCGCGTGCGGCGAACGGGTC
TGCGCCCCCTCGGGCTTACGCTAGCTTATACCACGCGCGGCTGAGTGTAT
GGCAGAGGCGCGAGAGGCGTTAGGCGCGTGCGCAGTATGGGAAGGAAAGA
GAGCCCTCGCGATTCGCACAACAATTGTAGCTCAAGATGCACGCAAAGGC
GAGTTTACCGGAAAGGAGACTAGTATCGGCGGGCAAGCCAGCACAGTCAA
CCCCCATCCCCCCCCCCTCCCCCACCGCTCCGACAGTCACCTCGTAAGGA
AATTAAGTAGAAGGGGGATGGCCTACAGCTGAGAGTTGCCGTGTCGAAGC
ACCCCCCAAGGTAGGCCTCCAGGCTGCGGCGCTGCTCTATTGTAGTAGGA
TATGTCGTATGCAACGCTACCTGGTTCTCACCGGCTCTGCCCTCTCCCCT
TTCCTGCCATGCACGGCGCTTTGGGCTTCTTGTGCGCGCTTTGGCTTCTT
GTGTGCGCTTGATTCCCCGCCCTGGGCCGACGCGAACACGCACGCAGCCG
TACTCCAATGGCCACCTGCCGAACCTGACCATCCGCAAGGAGATGTTGGC
GATCGTGATGATGCTTCCCGTGCAAGTGGACCACCTCAAGCGGAGCGGGA
TCGGGAAGGTCGTGATGGGGCTGCTAAACTGCAAGGAGGTTAGTTTAGCA
CTTGGCGTGCGGCTGCTGCGAGTCGTGCAGGCATCACTTTTCGCGCGGCG
ACCTACGATGATGCGTAAAACCAGTACTCTTAATAGTTATCGGCGGCGGA
ATGTATTTCTTGACCGGTCGCTTGCCTATCGTGTTCGCTCAGCGTATTGT
ACACATGCTGGTAAGGAAGCAGGAAATGTAGATCGGTGCTGTCTTTGTCC
GCCTTCGGTTCTCTACATACCTAAGCAGCGTCGTATGATAGGCTCTCTGT
TTTTTCTCCTTGGGCTGCGTGCTGTCAAATTCAAAACCTTCGTTAGCGAG
TGGTTCTTGCCCCGCTCCTCCCGTGGCCAAGCCTCGCCGTGTTGATTTTG
TTTTCAGCGAGCCGGTCTTTGCACGCAGAAAGTGACACCATCTTACTCTT
ACTATTTTTCGTACTGGTATCATGCTGCTTGTACACGCGCACCGCATCTA
TCTACCTTGCAGGAAACGCGCGAGAACAAGCTAGTGCTCCGCGAGCTCGT
GAGCAGATGGAACCGGCCCGTGTACGAGAAGGAGATGCATTACCGCGCGG
CGAGGACCATGCCCGACGAGACAGAGGCGATGGAAGTGCCGTCACGCGGC
GGCAGCAGCGCCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9640:3928..8440-

>mRNA_S-dermatodea_contig9640.17653.1 ID=mRNA_S-dermatodea_contig9640.17653.1|Name=mRNA_S-dermatodea_contig9640.17653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at S-dermatodea_contig9640:3928..8440- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGGGGGGGGGGTCGGCGGCGGGGGGCAAGACTCTGGGCCGTCTAAGGAA
AGGCGGCGGGAAGGGGAAGGGCAAGGGGAAGGGCAAGGGCAAGAAGCGCC
GGTCGGAGGGCGAGCCCGGCGAGGGGGGGGACGGAGGGTCGAGCAAGTCC
AAGGGCAAGAAGAAGAAGGGCGACAAGGGCAAGAAAAAGAAAAGCAAGAA
ACGAAAGGGGGAAACGGGCGACGAGGATGGCGAGCAGGAACGCCAGCCGA
AGAAGAAGGCCAAGAAGAAGGCCAAGAAGGATAAGGGCGGTAGCGCCAAG
CAGCTCGAGGATCTGGGGCTCTTGTCTTCGGGGGACGAGGAGGCGGAGGC
GTCAGACCTCGATCCCGTGGAACCCGGGGCGCTCGGCGACGAGGAGGAGA
TGGGCGCGGGGGCTGGGGAGGCCCGCACGCGGGAGGACGACGACTTCATC
GACAACACGGGGGGGGGGGGGTCGGCGGCGGGGGGCAAGACTCTGGGCCG
TCTAAGGAAAGGCGGCGGGAAGGGGAAGGGCAAGGGGAAGGGCAAGGGCA
AGAAGCGCCGGTCGGAGGGCGAGCCCGGCGAGGGGGGGGACGGAGGGTCG
AGCAAGTCCAAGGGCAAGAAGAAGAAGGGCGACAAGGGCAAGAAAAAGAA
AAGCAAGAAACGAAAGGGGGAAACGGGCGACGAGGATGGCGAGCAGGAAC
GCCAGCCGAAGAAGAAGGCCAAGAAGAAGGCCAAGAAGGATAAGGGCGGT
AGCGCCAAGCAGCTCGAGGATCTGGGGCTCTTGTCTTCGGGGGACGAGGA
GGCGGAGGCGTCAGACCTCGATCCCGTGGAACCCGGGGCGCTCGGCGACG
AGGAGGAGATGGGCGCGGGGGCTGGGGAGGCCCGCACGCGGGAGGACGAC
GACTTCATCGACAACACGGACGACAACGCGGACCTGCTGGAAGAGTACCA
GCACGATGCGCCCCCCGCCGGAAGCGACAGCGAGGCGGAGGAGGACAACA
AGCCCGAGTACCACGAGGAAGCCCCGCCGCAACAGAGCGCAATGAACGCG
GACGACAACGCGGACCTGCTGGAAGAGTACCAGCACGATGCGCCCCCCGC
CGGAAGCGACAGCGAGGCGGAGGAGGACAACAAGCCCGAGTACCACGAGG
AAGCCCCGCCGCAACAGAGCGCAATGAACGCGGTGCTAAGATCGATGAAG
CGGCGCAAGGCGCAGGAGCTGAGCACGGCGGAGCGGGAGCAGATCGCGCA
GGAGTTCATGTTCAAGATTAACCAGGCGGCCGAGGATGACGAGGAGGCCG
TTGTGGCCGGGAAGCCCGCTCTCAACAAGCTCAAGATGCTGAAGGTGCTA
AGATCGATGAAGCGGCGCAAGGCGCAGGAGCTGAGCACGGCGGAGCGGGA
GCAGATCGCGCAGGAGTTCATGTTCAAGATTAACCAGGCGGCCGAGGATG
ACGAGGAGGCCGTTGTGGCCGGGAAGCCCGCTCTCAACAAGCTCAAGATG
CTGAAGATGGTGAAGGCGACACTGGCGAAGAAGGAGCTCCAGGAAACCTT
CCTCGAGTTCGACCTGCTCGGCGTGGTGAAGCGATGGCTGCAGATGGTGA
AGGCGACACTGGCGAAGAAGGAGCTCCAGGAAACCTTCCTCGAGTTCGAC
CTGCTCGGCGTGGTGAAGCGATGGCTGCAGCCGTACTCCAATGGCCACCT
GCCGAACCTGACCATCCGCAAGGAGATGTTGGCGATCGTGATGATGCTTC
CCGTGCAAGTGGACCACCTCAAGCGGAGCGGGATCGGGAAGGTCGTGATG
GGGCTGCTAAACTGCAAGGAGCCGTACTCCAATGGCCACCTGCCGAACCT
GACCATCCGCAAGGAGATGTTGGCGATCGTGATGATGCTTCCCGTGCAAG
TGGACCACCTCAAGCGGAGCGGGATCGGGAAGGTCGTGATGGGGCTGCTA
AACTGCAAGGAGGAAACGCGCGAGAACAAGCTAGTGCTCCGCGAGCTCGT
GAGCAGATGGAACCGGCCCGTGTACGAGAAGGAGATGCATTACCGCGCGG
CGAGGACCATGCCCGACGAGACAGAGGCGATGGAAGTGCCGTCACGCGGC
GGCAGCAGCGCCGAAACGCGCGAGAACAAGCTAGTGCTCCGCGAGCTCGT
GAGCAGATGGAACCGGCCCGTGTACGAGAAGGAGATGCATTACCGCGCGG
CGAGGACCATGCCCGACGAGACAGAGGCGATGGAAGTGCCGTCACGCGGC
GGCAGCAGCGCC
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