mRNA_S-dermatodea_contig9634.17646.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9634.17646.1
Unique NamemRNA_S-dermatodea_contig9634.17646.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A6H5JFF7_9PHAE (DUF4209 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF7_9PHAE)

HSP 1 Score: 575 bits (1481), Expect = 4.170e-179
Identity = 454/1111 (40.86%), Postives = 554/1111 (49.86%), Query Frame = 2
Query:   29 GTFAADYFQSSPFLQSLAIFVRSQTRQSVGREADATSL----ESSEKQESLTSLTPEVLAQLLVVRREADSESRGRP---GLLTTATFDSSTSAALVEEDWSINWPCVRIAPDSPEGGEESLVAGARLAVACHAALRRREEDQQLLLQ-------------------TMERL--PGLSFVVEWIVRG-GSDDETYVALCVCLTVLEKALFDIDRRAESRETETNCCETASAHAYGSGATTRWETG----DASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLG-LSPIRSLTASESRSV-VDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHA--------------LFLVAVLPLLEHGLRCIFSCANASPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEMSGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVVALAAVVFLVLCWRYDPALQTAHGGGGSGGNDGDLECHRDEATK-GSDNSRRLNSDGFEKALRSCEAHCSEWVPRFHPHELLEVDLQASWAEFDLLALVLEARTVSVERL--PEGKDIARMSVAISPHANGDAVAAAAAWSTTRGVT---VQEQTEDEDRDKRTLEGNYHLATEEGAARGNYSLPVFLTVIDNASRLMPSVDEAEMGAATPPS-AGTGGRANKKQATAAQTGLFPTLFRVNRGLREHGVALGGRFERTAAVYTRGQKGECPPSSSYASLHRVSGAEYQRP-ELPASNGETSAFATYTHSRRCVDFAGCSLTCLEGGKGSSLEGAPMLARALPQTMESSAAAAAATKGVTGATIAIGPTNLGAEDVPTSQSTDASARSCRGGHNCDTRSPEDGGKRSVSARDADGPTPPGEDDATSMQANGYASPQAGDAFSTPRILWRRNREPRRISPPTNVVTAAPLPQIACMAGICRVCADVARGIRDRINELEALMTSGTARSGHRRTYAATLSVAPTLLRFLALTQAAV 3190
            G F A +  SSPFL+ L+ FVR        RE+D  +L    ES  K  +L+ L+PEVLA+L  V   A  +   R    G     T       +L  E   + W  VR++    +GG E+L  GARLAVACHAAL+++                            T ERL  PG   VVE IVR   S+++ YVALCVCLT+LE+AL++I R+  S +T  N       H   S    R E+     DA+G+ G GG+   APAMILRDLIA+P VK ALPEQ++AILRLLLLP+GFNIRNLVWHGFLAP ELP+ELASL+L+VTLSI   ++ + + G ++         SR + +    LPM  AP++  S++ A    W LD+FDD LACP ALT A+E LLS QH GEL ALVR SAF+LPGRE + +LALRALA  R A               FLVA+LP+LEHGLR +FS AN SP H+FAH  +YYSTLDGFGQRARHQLLLDQEMSGCP RPNLLL+ALGPG+SACLLDLFMMSAGPNLRGK+AH EID+   F P        P +V L A +FLVLC RYD    T                 R+E+   G  +S       F KAL  CEAHCS WVPRFHPHELLEVDL+A   EFD LAL LE R +SVE L    G D+ARMSV IS    GD            G     VQ +                                             +    E  A  PP+  G  G    K    + +G+F +L RVN  LREHG +L  RF+R                             +QR  E P      SAFA + + ++           L  G GS                                                             GH C                        G+ +   +Q  G   P                    RISPPTNV+T APLPQ   MA +C+ CA+ A G+R+RI ELEAL++SG+ARSG RR YA TL VAPT+LRFLA T A V
Sbjct:   13 GCFEAAFVSSSPFLRGLSSFVR--------RESDIATLSSEVESGPKPPTLSCLSPEVLARLRFVENAAGRQQGNRTAAAGPTEGKTSVGEQDISLFSEGGRVEWSRVRMSATG-DGGVEALADGARLAVACHAALQQQXXXXXXXXXXXXXXXXXXXXXXXXPREVTNERLQMPG---VVERIVRAESSEEQVYVALCVCLTILERALYEIYRKGVS-QTNNNYRSVGEQHRSDS-TLAREESSEVKEDAAGVDGRGGSLG-APAMILRDLIATPEVKAALPEQLVAILRLLLLPMGFNIRNLVWHGFLAPCELPRELASLVLVVTLSISADLSPEGEAGDVARFGEPPELSSRKLPLSPPTLPM-TAPQLHPSSSAAA--WWELDSFDDRLACPRALTSAVECLLSAQHRGELKALVRRSAFVLPGREKLTMLALRALAGERDAQGDDEEEGNGGGIAFFLVALLPVLEHGLRVLFSSANDSPGHMFAHTLRYYSTLDGFGQRARHQLLLDQEMSGCPDRPNLLLSALGPGMSACLLDLFMMSAGPNLRGKVAHGEIDVSRVFRPSRSCPQTAPELVQLTAALFLVLCRRYDAGRDTVD---------------REESVGVGRVDSSNSFFPAFAKALDECEAHCSGWVPRFHPHELLEVDLRACRDEFDGLALALERRAISVEVLRGSHGGDLARMSVEIS----GDGRRCGGGTCKEDGEINRKVQGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPGAVEHDARLPPAKCGATGIVQNKNVQGSTSGMFASLLRVNEALREHGASLARRFQR-----------------------------HQRSVEAPT---RASAFAVHYNKQQ-----------LRPGVGSCF-----------------------------------------------------------GHEC-----------------------LGQRNQCRLQDRGVFLPDDNHG---------------RISPPTNVITCAPLPQRQMMATLCKACAESALGLRERIAELEALLSSGSARSGQRRAYATTLQVAPTILRFLASTVAPV 946          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: D7FQF8_ECTSI (DUF4209 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF8_ECTSI)

HSP 1 Score: 560 bits (1443), Expect = 6.350e-175
Identity = 395/839 (47.08%), Postives = 484/839 (57.69%), Query Frame = 2
Query:   32 TFAADYFQSSPFLQSLAIFVRSQTRQSVGREADATSLESSEKQESLTSLTPEVLAQLLVVRREADSESRGRP---GLLTTATFDSSTSAALVEEDWSINWPCVRIAPDSPEGGEESLVAGARLAVACHAALRRREEDQQLLLQ-------------------TMERL--PGLSFVVEWIVRG-GSDDETYVALCVCLTVLEKALFDIDRRAESRETETNCCETASAHAYGSGATTRWETG-----DASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIY-DSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHA---------------LFLVAVLPLLEHGLRCIFSCANASPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEMSGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVVALAAVVFLVLCWRYDPALQTAHGGGGSGGNDGDLECHRDEATKGSDNSRRLNSDGFEKALRSCEAHCSEWVPRFHPHELLEVDLQASWAEFDLLALVLEARTVSVERL--PEGKDIARMSVAISPHANGDAVAAAAAWSTTRGVTVQEQTED--EDRDKRTLEGNYHLATEEGAARGNYSLP----VFLTVIDNASRLM----PSVDEA-EMGAATPPS--AGTGGRANKKQATAAQTGLFPTLFRVNRGLREHGVALGGRFER 2365
            +F A +  SSPF + L+ FVR ++  +    A ++  ES  K  +L+ L+PEVLA+L  V   A  +   R    G     T       +L  E   + W  VRI+  S +GG E+L  GARLAV CHAAL+R ++ QQ   Q                   T ERL  PG   VVE IVR   S ++ YVALCVCLT+LE+AL+DI R+  S   +TN    +    +GS +T   E       DA G+ G GG+   APAMILRDLIA+P VK ALPEQ++AILRLLLLP+GFN+RNLVWHGFLAP ELP+ELASL+L+VTLSI  DS  + +   ++         SR ++ S       AP+  +  +++ +  W LD+FD+ LACP AL  A+E LLS QH  EL  LVR SAF+LPGRE + +LALRAL   R A                FLVAVLP+LEHGLR +FSCAN SP H+FAH ++YYSTLDGFGQRARHQLLLDQEMSGCP RPNLLL+ALGPG+SACLLDLFMMSAGPNLRGK+AH E+D+   F P P      P +V L A +FLVLC RYD    T            D E        GS NS    S  F +AL  CEAHCS WVPRFHPHELLEVDL+AS  EFD LAL LE R +SVE L    G D+ARMSV IS    GD            G T +E  E   E + +                    + P    V LTV D ASRL+    P   EA E  A  PP+    TG   NKK    + +G+F +L RV+  LREHG +L  RF+R
Sbjct:   14 SFEAAFVSSSPFFRGLSSFVRRESAIA----AFSSEAESGRKPPTLSCLSPEVLARLRFVENAAGRQQGNRTAAAGRTEGRTSVGEQDISLFSEGGRVEWSRVRISA-SGDGGVEALADGARLAVVCHAALQRHQQQQQRQGQLEQLAAPTSSPLPPVPREVTNERLQMPG---VVERIVRAESSKEQVYVALCVCLTILERALYDIYRKGAS---QTNNNYRSVGEEHGSDSTLAHEESFEGKEDAEGIDGRGGSLG-APAMILRDLIATPEVKAALPEQLVAILRLLLLPMGFNVRNLVWHGFLAPCELPRELASLVLVVTLSISADSSPEGETGDVARFGEQPELSSRKLLLSPPTLPKTAPQ--LDRSSSATAWWELDSFDNRLACPRALASAVEYLLSAQHRDELKTLVRRSAFVLPGREKLTMLALRALGGERDAQGDXXXXXXXXXXXXFFLVAVLPVLEHGLRVLFSCANDSPGHMFAHAQRYYSTLDGFGQRARHQLLLDQEMSGCPDRPNLLLSALGPGMSACLLDLFMMSAGPNLRGKVAHGEVDVSRVFLPSPSCSQTAPELVKLTAALFLVLCRRYDAGRDTV-----------DREESAGVGPVGSSNSF---SRAFAEALDECEAHCSGWVPRFHPHELLEVDLRASRDEFDGLALALERRAISVEVLHGSHGGDLARMSVEIS----GDGRRC-------DGRTCEEDGEINWEVQGREXXXXXXXXXXXXXXXXXXDAQPSEGRVVLTVTDTASRLVVPPPPRAPEAVEHDARLPPAKCGATGKLQNKKNVQGSTSGMFASLLRVDEALREHGASLARRFQR 813          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A024U089_9STRA (DUF4209 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U089_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.660e-32
Identity = 133/427 (31.15%), Postives = 191/427 (44.73%), Query Frame = 2
Query:  389 LAVACHAALRRREEDQQLLLQTMERLPGLSFVVEWIVRGGSDDETYVALCVCLTVLEKALFDIDRRAESRETETNCCETASAHAYGSGATTRWETGDASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHALFLVAVLPLLEHGLRCIFSCANAS--PEHL-FAHLRQYYSTLDGFGQRARHQLLLDQEM----SGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVVALAAVVFLVL 1648
            LA A HAA+   +  +  +  ++     + FVV+ +  G      Y +  + +T+LE+AL+D               + A+ H            G  S M             ILRDL+ SPT+ K LP   M +L +L LP G NIRNLVWHGFLAP ELP  L SL+L++          D  L     R +    ++                 + + +     W   TF D +A P + T             ++C      A ++  R G+   A+ A A GR    L   +P+LEH +RC F   NA   P  + FA L+QYYSTLDGFGQR +HQ+LL +E+    +      N L  +L   + A  LDLFM +AGPN+R K+ H E+ + +    P  T P    +   A +V  VL
Sbjct:   20 LAHAVHAAMEH-DSVEVTIHSSLTHASVVPFVVDQLRHG----HFYASFTILVTILERALYD---------------QYAALH-----------KGQKSNM-------------ILRDLLHSPTLHKHLPRGYMQVLHVLFLPSGLNIRNLVWHGFLAPFELPGCLNSLLLVLLA--------DPCLQRDGCRRVAEQRTQH----------------LPSMHPARVQWTWATFSD-IALPASPTK------------DMCP---SYAMVVKSRWGLLHEAMAAFASGRSLWSLFLAIPVLEHLVRCEFVVQNAPAVPTAMQFAQLKQYYSTLDGFGQRHQHQVLLARELFLPNADKDEMHNRLYESLPHSVLAACLDLFMAAAGPNIRAKLCHGELSLDTLHASPGYTSPDMTSLDVCAGLVLAVL 362          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A067BQN9_SAPPC (DUF4209 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQN9_SAPPC)

HSP 1 Score: 139 bits (351), Expect = 4.440e-31
Identity = 115/329 (34.95%), Postives = 162/329 (49.24%), Query Frame = 2
Query:  728 MILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHALF-LVAVLPLLEHGLRCIFSCANASPEHLFAH--LRQYYSTLDGFGQRARHQLLLDQEM--------SGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVVALAAVVFLVLCWRYDPALQTA 1681
            MILRDL+ SP + +ALP   + +LRLL  P G N+RNLVWHGF+AP +LP   ASL+L++ +               P+  L  + S  +V + L P   +   L + T   +F  A+D  D+  A       A + L+                            A+ AL +G HALF L   +P+LE+ +RC F   N S     AH  L +YYSTLDGFGQR++HQ+LL + +        S      N L   L P   A  +DLFM +AGPN+R K+ H E+D+ + +   P    GT  +   AA+V L+L  R  P+ Q A
Sbjct:  144 MILRDLLQSPELVQALPPGYLQLLRLLFFPSGLNLRNLVWHGFVAPMDLPGCFASLLLVLLVE--------------PV--LLDAASAHLVYASLPPFAPSTAPLCAATR--NFVAAVD-LDNVFAAASVQAKARQRLVQR--------------------------AIDALQDG-HALFSLFLSIPVLEYLVRCDFVRVNPSVPRGMAHAQLAEYYSTLDGFGQRSQHQVLLARTLFDSVPTLSSTTDDDRNRLYETLSPSALAASVDLFMCAAGPNVRAKLCHGEVDLSTLWVATPS---GTTTIDISAALVLLLLLERLCPSDQLA 423          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A662XHI6_9STRA (DUF4209 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHI6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.890e-31
Identity = 111/303 (36.63%), Postives = 147/303 (48.51%), Query Frame = 2
Query:  728 MILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDD---CLACPPALTLALELLLSEQHCGELCALVR--HSAFLLPGREGMALLALRALAE-GRHALFLVAVLPLLEHGLRCIFSCANASPEHLF-----AHLRQYYSTLDGFGQRARHQLLLD-------------QEMSGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDI 1564
            MILRDL+ S T+++ LP  ++ +L++L LP G N+RNLVWHGF+ P E PK    L L++ L++               R    SE R              E  ++TT+     + LD+FD     +  P  L +AL L   E H      + R   S+F+ PGR  +   A+ AL E G    FL   LP+LEH LR  F   N +   L      A +  YYSTLDGFGQ+ +HQ+LL              +   G   RPN L   L     A LLDLFMMS GPNLR K+ H E D+
Sbjct:    1 MILRDLLQSETLREVLPAGLLRLLQILFLPSGLNLRNLVWHGFIVPAEFPKCFGCLTLLLILTLP--------------RFFRPSEGR--------------EYDLATTDL----FKLDSFDSKFVAMEPPDDLVVALRL---EPHATRDWTINRWVKSSFVPPGRSNLLHRAIEALIERGDELWFLFGALPVLEHALRLEFLRTNQARAALSSAYDCAQIDAYYSTLDGFGQKDKHQVLLHPVVLLEAADDAKIEAKGGARSRPNALYETLPFASLAVLLDLFMMSGGPNLRAKLCHGEADL 268          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A1Y2CVE1_9FUNG (DUF4209 domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CVE1_9FUNG)

HSP 1 Score: 140 bits (354), Expect = 9.610e-31
Identity = 108/320 (33.75%), Postives = 156/320 (48.75%), Query Frame = 2
Query:  728 MILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACP-------PALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHALFLVAVLPLLEHGLRCIFSCANASPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEMSGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVV-ALAAVVFLVLCWRYD 1663
            +ILRDLI+SP     L   ++ +L+ L LP G NIRNLVWHGF+   E+P    +L+   T+ I D+  +                               P++ + T      G  L+ F+     P       P LT    L +SE     +  L++ + F+    +  A+ A   L +G   LFL + LP LEH LR +F+  N  P+   AH  +Y+STLDGFGQR  HQ+LLD+ +    G PN LL  LG G+ + LLDLFMM  G  +RGK+ H E  + +      G   G   V+ AL   VF++LC +++
Sbjct:   67 LILRDLISSPEFSHHLHPTLLKVLKTLFLPSGINIRNLVWHGFITSEEIPDTYLNLL---TILIQDTFHK-------------------------------PDIFVPTGT----GVHLNAFNSHPNLPLETKTILPNLTF---LCVSESFSNTI-HLLQTTKFIPDTHKNQAIAAFHHLQDGNSLLFLFSALPTLEHSLRTLFAKVNNIPDISIAHQDKYFSTLDGFGQRNLHQVLLDRVVLAT-GEPNRLLEVLGDGVVSVLLDLFMMERGFGVRGKLCHGETFMDTILEEKKG---GEVDVMTALVCWVFIMLCHKFN 340          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: K3W697_GLOUD (DUF4209 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W697_GLOUD)

HSP 1 Score: 142 bits (359), Expect = 9.810e-31
Identity = 130/418 (31.10%), Postives = 181/418 (43.30%), Query Frame = 2
Query:  368 SLVAGARLAVACHAALRRREEDQQLLLQTMERLPGLSFVVEWIVRGGSDDETYVALCVCLTVLEKALFDIDRRAESRETETNCCETASAHAYGSGATTRWETGDASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNA---ESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALA-EGRHALFLVAVLPLLEHGLRCIFSCANA-----SPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEM----------SGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDI 1564
            +L   A   V  HAAL R +E    ++   E L  L+ V++   RG    E Y+A  V +TVLE+AL+D+       +TE                                   +    MILRDL+AS T+ + LP   + +L+ L LP G N+RNLVWHGF+ P E PK  +SL L++ +++   +    D G         +E+ +  D  L  +       +        +    A +  +  L     LT                     S F+  GRE +   AL AL  +G    FL A+LP+LEH +R  F  +N      S E+  A L  YYSTLDGFGQR +HQ+LL  ++             P   N L     P   A  LDLFMMS GPNLR K+ H E D+
Sbjct:   93 ALALHAETVVTRHAALWRHDER---VVTHGEHLEALAAVLQ-DARG----EFYMAFVVLITVLERALYDVYHVHHDLKTE-----------------------------------KKKKNMILRDLLASTTLARVLPSGFLRLLQTLFLPSGLNLRNLVWHGFMVPAEFPKCFSSLTLVLIMALAPYLKAPSDDG---------AEAMNEEDKALFTIESFNNRFVFQNGGVLRDHVVGASEWIEKLLQGDSDLT---------------------SPFIPRGRERLVRKALTALIHDGDELWFLFALLPVLEHAVRIQFLASNQVKWGISSEYGTAQLDAYYSTLDGFGQRDKHQVLLHPQVMLADMPMAEGGEAPPALNQLYTTFPPAALAVCLDLFMMSTGPNLRAKLCHGEADL 437          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A067BZM6_SAPPC (DUF4209 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BZM6_SAPPC)

HSP 1 Score: 132 bits (333), Expect = 1.070e-30
Identity = 100/288 (34.72%), Postives = 142/288 (49.31%), Query Frame = 2
Query:  728 MILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHALF-LVAVLPLLEHGLRCIFSCANASPEHLFAH--LRQYYSTLDGFGQRARHQLLLDQEMSGCPGRPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPP 1582
            MILRDL+ SP +  ALP   + +LRLL  P G N+RNLVWHGF+AP +LP   ASL+L++ +                                         VL+ T +A     +L +F    A   A T  L   L      +L  +   ++     R+ +   ++ AL +G HALF L   +P+LE+ +RC F   N S     AH  L +YYSTLDGFGQR++HQ+LL + +       N L   L P   A  +DLFM +AGPN+R K+ H E+D+ ++  P
Sbjct:    1 MILRDLLQSPELVTALPSGYLQLLRLLFFPSGLNLRNLVWHGFVAPMDLPGCFASLLLVLLVE---------------------------------------PVLLDTASAHLVYASLPSFAPSTAPLCAATRNLFATL------DLDNVFAAASVQAKARQRLVQRSIDALHDG-HALFSLFLSIPVLEYLVRCDFVRVNPSVPRGMAHAQLSEYYSTLDGFGQRSQHQVLLARTLFDSDDARNRLYETLSPSALAASVDLFMCAAGPNVRAKLCHGEVDLVTSTRP 242          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A5D6XQD3_9STRA (DUF4209 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQD3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.500e-30
Identity = 147/479 (30.69%), Postives = 205/479 (42.80%), Query Frame = 2
Query:  518 ETYVALCVCLTVLEKALFDI--DRRAESRETETNCCETASAHAYGSGATTRWETGDASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAE-GRHALFLVAVLPLLEHGLRCIFSCAN-----ASPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEM--------SGCPG------RPNLLLAALGPGLSACLLDLFMMSAGPNLRGKIAHAEIDIFSAFPP-PPGTGPGTPGVVALAAVVFLVLCWRYDPALQTAHGGGGSGGNDGDLECHRDEATKGSDNSRRLNSDGFEKALRSCEAHCSEWVPRFHPHELLEVDLQASWA 1885
            E Y+A  V +TVLE+AL+D+  D+  +           ++  +  +  T                TA     MILRDL+ S  + +ALPE ++ +L +L LP G N+RNLVWHGF+ P E P+    L+ ++ L++    A +Q     P+  + + + R  +  + L                     LD    C A        L  LL              S+F+  GR  +   A RALAE G    FL A+LP+LEH +R  F   N      S  +  A +  YYSTLDGFGQR +HQ+LL   +        S   G      R N L   L     A  LDLFMM+AGPNLR K+ H E D+ +     PPGTG          A   +VL W    ++  A     S  +DG   C          +S+ L S G   A    +A    +V  FHP   LE  L ++ A
Sbjct:  140 EFYMAFVVLITVLERALYDLYYDQGGDDXXXXXXXXXXSARISTKTTMT----------------TAAKKKNMILRDLLHSAPIARALPEGLLRLLHVLFLPSGLNLRNLVWHGFVVPAEFPRCFGCLLAVLVLAL-PRRAHEQPA--EPLFDVRSYDRRFFLHDDALRR------------------QLDALFQCPATADGTAPGLTALLDASG-------ATSSSFVPMGRRQLVAKAFRALAERGDELWFLFALLPVLEHAVRVAFVATNRDVWGVSSAYGAAQIDAYYSTLDGFGQRDKHQVLLHPRVVRERAATDSASRGGDSDRVRRNQLYTVLPAAALAACLDLFMMAAGPNLRAKLCHGEADLATLLQRRPPGTG-------IAVATQLVVLAWF---SMCRAMNASSSRKDDGP-PC----------SSQSLVSAGVGPADALVDAFEERYVSSFHPFYQLERALGSALA 553          
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Match: A0A8K1CA57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA57_PYTOL)

HSP 1 Score: 141 bits (356), Expect = 2.680e-30
Identity = 123/365 (33.70%), Postives = 169/365 (46.30%), Query Frame = 2
Query:  518 ETYVALCVCLTVLEKALFDIDRRAESRETETNCCETASAHAYGSGATTRWETGDASGMGGEGGTAEVAPAMILRDLIASPTVKKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTLSIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAESFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGREGMALLALRALAEGRHAL-FLVAVLPLLEHGLRCIFSCAN-----ASPEHLFAHLRQYYSTLDGFGQRARHQLLLDQEM-------SGCPGRPNLLLAA---LGPGLSACLLDLFMMSAGPNLRGKIAHAEIDI 1564
            E Y++  + +T+LE+AL+D+  +     T  +            G T R +    +              MILRDL+ S T+   LPE +MA+LR+L LP G NIRNLVWHGF+ P E P+    L  ++ L +             P      + S+S   SE  PM                 + L  FD+    P  LT   EL  S  H  +  A +  S F+  GR  +   AL AL++      FL A+LP+LEH LR  F  AN      S E+  A +  YYSTLDGFGQR +HQ+LL  E+          P    +L +    L P   A  LDLFMM++GPN+R K+ H E D+
Sbjct:  140 EYYMSFLILITILERALYDLYHQYAKPSTTPD------------GKTPRKKNKKKN--------------MILRDLLHSDTLNSVLPEGLMALLRILFLPSGLNIRNLVWHGFMIPAEFPRCFGCLTAILLLEL-------------PRYFKAPASSKS---SESEPM-----------------FRLRWFDERFILPSQLTKRPELT-SWVH--KHSAAIALSGFVPKGRANLVQKALDALSQDSDEYWFLFAILPVLEHALRVEFVRANNENFEISTEYAVAQIDAYYSTLDGFGQRDKHQVLLHPEVLLDTKPDGEAPSSSTVLNSVYEMLSPAALAVFLDLFMMASGPNVRAKLCHGEADL 442          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9634.17646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFF7_9PHAE4.170e-17940.86DUF4209 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FQF8_ECTSI6.350e-17547.08DUF4209 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A024U089_9STRA2.660e-3231.15DUF4209 domain-containing protein n=1 Tax=Aphanomy... [more]
A0A067BQN9_SAPPC4.440e-3134.95DUF4209 domain-containing protein n=1 Tax=Saproleg... [more]
A0A662XHI6_9STRA4.890e-3136.63DUF4209 domain-containing protein n=1 Tax=Nothophy... [more]
A0A1Y2CVE1_9FUNG9.610e-3133.75DUF4209 domain-containing protein n=1 Tax=Rhizoclo... [more]
K3W697_GLOUD9.810e-3131.10DUF4209 domain-containing protein n=1 Tax=Globispo... [more]
A0A067BZM6_SAPPC1.070e-3034.72DUF4209 domain-containing protein n=1 Tax=Saproleg... [more]
A0A5D6XQD3_9STRA2.500e-3030.69DUF4209 domain-containing protein n=1 Tax=Pythium ... [more]
A0A8K1CA57_PYTOL2.680e-3033.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9634contigS-dermatodea_contig9634:1357..7589 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score573.5
Seed ortholog evalue2.2e-160
Seed eggNOG ortholog2880.D7FQF8
Preferred nameERMARD
EggNOG free text desc.Domain of unknown function (DUF4209)
EggNOG OGs28JNU@1,2QS21@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF4209
Ec32 orthologEc-01_006290.1
Exons5
Model size5291
Cds size3624
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925421.8711944-UTR-S-dermatodea_contig9634:1356..13691622925421.8711944-UTR-S-dermatodea_contig9634:1356..1369Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9634 1357..1369 +
1694079922.2940922-UTR-S-dermatodea_contig9634:1356..13691694079922.2940922-UTR-S-dermatodea_contig9634:1356..1369Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9634 1357..1369 +
1622925421.9521787-UTR-S-dermatodea_contig9634:5935..75891622925421.9521787-UTR-S-dermatodea_contig9634:5935..7589Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9634 5936..7589 +
1694079922.352918-UTR-S-dermatodea_contig9634:5935..75891694079922.352918-UTR-S-dermatodea_contig9634:5935..7589Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9634 5936..7589 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925421.885045-CDS-S-dermatodea_contig9634:1369..22001622925421.885045-CDS-S-dermatodea_contig9634:1369..2200Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 1370..2200 +
1694079922.3060367-CDS-S-dermatodea_contig9634:1369..22001694079922.3060367-CDS-S-dermatodea_contig9634:1369..2200Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 1370..2200 +
1622925421.895801-CDS-S-dermatodea_contig9634:2622..28321622925421.895801-CDS-S-dermatodea_contig9634:2622..2832Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 2623..2832 +
1694079922.315277-CDS-S-dermatodea_contig9634:2622..28321694079922.315277-CDS-S-dermatodea_contig9634:2622..2832Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 2623..2832 +
1622925421.9070888-CDS-S-dermatodea_contig9634:2955..32851622925421.9070888-CDS-S-dermatodea_contig9634:2955..3285Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 2956..3285 +
1694079922.3244426-CDS-S-dermatodea_contig9634:2955..32851694079922.3244426-CDS-S-dermatodea_contig9634:2955..3285Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 2956..3285 +
1622925421.9195695-CDS-S-dermatodea_contig9634:3640..38511622925421.9195695-CDS-S-dermatodea_contig9634:3640..3851Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 3641..3851 +
1694079922.3335843-CDS-S-dermatodea_contig9634:3640..38511694079922.3335843-CDS-S-dermatodea_contig9634:3640..3851Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 3641..3851 +
1622925421.9409285-CDS-S-dermatodea_contig9634:3893..59351622925421.9409285-CDS-S-dermatodea_contig9634:3893..5935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 3894..5935 +
1694079922.3438234-CDS-S-dermatodea_contig9634:3893..59351694079922.3438234-CDS-S-dermatodea_contig9634:3893..5935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9634 3894..5935 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9634.17646.1prot_S-dermatodea_contig9634.17646.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9634 1370..5935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9634.17646.1

>prot_S-dermatodea_contig9634.17646.1 ID=prot_S-dermatodea_contig9634.17646.1|Name=mRNA_S-dermatodea_contig9634.17646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1208bp
MDTKSGTFAADYFQSSPFLQSLAIFVRSQTRQSVGREADATSLESSEKQE
SLTSLTPEVLAQLLVVRREADSESRGRPGLLTTATFDSSTSAALVEEDWS
INWPCVRIAPDSPEGGEESLVAGARLAVACHAALRRREEDQQLLLQTMER
LPGLSFVVEWIVRGGSDDETYVALCVCLTVLEKALFDIDRRAESRETETN
CCETASAHAYGSGATTRWETGDASGMGGEGGTAEVAPAMILRDLIASPTV
KKALPEQMMAILRLLLLPLGFNIRNLVWHGFLAPHELPKELASLILMVTL
SIYDSVAQDQDLGLSPIRSLTASESRSVVDSELLPMGVAPEVLISTTNAE
SFGWALDTFDDCLACPPALTLALELLLSEQHCGELCALVRHSAFLLPGRE
GMALLALRALAEGRHALFLVAVLPLLEHGLRCIFSCANASPEHLFAHLRQ
YYSTLDGFGQRARHQLLLDQEMSGCPGRPNLLLAALGPGLSACLLDLFMM
SAGPNLRGKIAHAEIDIFSAFPPPPGTGPGTPGVVALAAVVFLVLCWRYD
PALQTAHGGGGSGGNDGDLECHRDEATKGSDNSRRLNSDGFEKALRSCEA
HCSEWVPRFHPHELLEVDLQASWAEFDLLALVLEARTVSVERLPEGKDIA
RMSVAISPHANGDAVAAAAAWSTTRGVTVQEQTEDEDRDKRTLEGNYHLA
TEEGAARGNYSLPVFLTVIDNASRLMPSVDEAEMGAATPPSAGTGGRANK
KQATAAQTGLFPTLFRVNRGLREHGVALGGRFERTAAVYTRGQKGECPPS
SSYASLHRVSGAEYQRPELPASNGETSAFATYTHSRRCVDFAGCSLTCLE
GGKGSSLEGAPMLARALPQTMESSAAAAAATKGVTGATIAIGPTNLGAED
VPTSQSTDASARSCRGGHNCDTRSPEDGGKRSVSARDADGPTPPGEDDAT
SMQANGYASPQAGDAFSTPRILWRRNREPRRISPPTNVVTAAPLPQIACM
AGICRVCADVARGIRDRINELEALMTSGTARSGHRRTYAATLSVAPTLLR
FLALTQAAVEAFVIEWDGQELQGAGGTCTTTAANNSRGKGPPSSLSASTG
APVGAMPVGPPPPPLLPGDDDRGSRAAVGPSPSLTTQATRTAPPGAKTRL
AFLRRLAAVNGALGLCVLQGAGGGGGGAVQRKGYVQALGELASFLETKAA
RRGFAGL*
back to top

mRNA from alignment at S-dermatodea_contig9634:1357..7589+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9634.17646.1 ID=mRNA_S-dermatodea_contig9634.17646.1|Name=mRNA_S-dermatodea_contig9634.17646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6233bp|location=Sequence derived from alignment at S-dermatodea_contig9634:1357..7589+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCCATCTAACGAGATGGATACCAAGAGCGGGACTTTTGCGGCAGACTACT TTCAGTCCAGCCCATTTCTGCAGAGTCTCGCCATCTTCGTCCGCTCCCAG ACAAGGCAAAGCGTCGGAAGGGAAGCGGATGCCACCTCTCTCGAGTCCAG CGAAAAGCAGGAATCCCTTACTTCCCTGACGCCCGAGGTCCTGGCCCAGC TGCTCGTGGTGAGGAGAGAGGCCGATTCAGAAAGCCGAGGACGGCCGGGA TTGCTGACCACAGCCACGTTCGACAGCAGCACGAGCGCTGCCTTAGTCGA GGAGGATTGGAGCATAAACTGGCCATGCGTTAGAATCGCTCCAGACTCAC CAGAGGGAGGCGAAGAATCCCTCGTTGCGGGCGCGCGACTCGCCGTCGCA TGCCATGCGGCGCTCCGGCGTCGAGAAGAAGACCAACAACTACTGTTGCA AACCATGGAACGACTGCCTGGCCTTTCCTTCGTGGTAGAGTGGATCGTGC GAGGCGGGTCCGACGATGAAACCTATGTCGCGCTGTGCGTCTGTCTCACA GTCCTCGAAAAGGCGCTCTTTGATATTGATCGTCGGGCAGAAAGCAGGGA GACGGAGACCAACTGCTGCGAAACGGCGAGCGCTCACGCTTACGGCAGCG GTGCGACAACTCGTTGGGAGACCGGGGATGCGAGCGGTATGGGTGGTGAA GGTGGGACTGCGGAGGTTGCTCCTGCCATGATCTTGCGGGATCTGATTGC GAGTCCCACCGTGAAGAAGGCTCTGCCCGAACAGATGATGGCGATTCTGC GGCTTCTCCTTCTGCCGCTGGGGTTCAACATCCGGAACCTCGTGGTGAGT GTGACGGCGCAGCTATACTGAGCAGTGGGTACGCAGCACGATGTGGAGTT GACTAAAAAACGAGGCAACACGCGGTCATGGTTCCAGGCACATACGCAGA AGCGAGATTCGATGTTTCCACAGATTCATCTTAAGAGTGCTCTCTGATGG CTTGCTCAAAACCTGCGTTGCCGAGTGGTACGTGTGCCTCATACCTTGTG TACAAGGACACCTAGGCTAGCCTGCGGCAACCGCTATCCCCTCCTTATCA CAATAAGTAACACAACGACAAGCCATTCACCCCTCGCCCCCTCCTACTTT GTTGGGGCGCGTGGCCTATGTCCGTTTGGATATGGCGTGCATCAAACATA AGGACACCCCCCCCCCTCCCTCCCACTCTCCTCGCTCATTCGCGGATCAA TCACATGCACGGGAAGTGGCACGGTTTTCTGGCTCCTCACGAACTGCCGA AGGAGCTTGCCTCCCTTATCCTTATGGTGACCCTGAGCATCTACGATTCG GTGGCGCAAGACCAAGATTTGGGCTTGTCGCCGATCCGATCGCTCACGGC GAGCGAATCCCGCTCTGTGGTGGATTCTGAACTCCTTCCTATGGGCGTGG CGCCCGAAGTCCTGATCAGCACCACGGTGAACACCTCGACCATCGAACGG TCCCGAGAGTCGGGCCCGCCCGAGTGGCAAAGAAGCGACGAAAATATCGA CGGAAGATGCACGGGCGACGCAGGGGGAACTGTACCGCAGCGGCCCGAGA ACGCGGAAAGTTTCGGTTGGGCTCTGGATACCTTCGACGACTGCCTTGCG TGCCCGCCTGCCCTTACCTTGGCGCTAGAGCTGTTGTTGAGTGAACAGCA CTGCGGCGAGCTGTGTGCTCTAGTCAGGCACTCCGCGTTCTTGCTTCCAG GGAGAGAAGGCATGGCACTGCTAGCCCTGCGAGCGCTCGCGGAGGGACGT CACGCTCTGTTCTTGGTCGCGGTACTTCCGCTCTTGGAGCACGGGCTCCG GTGCATATTCTCCTGTGCGAACGCATCCCCGGAGCACCTCTTCGCGCATC TGCGGCAGTACTACTCGACGTTGGACGGGGTCAGTCTTGGGGAGGATTTC AGGGGAAATCTAGAGCGGCCGAGAGAACGACTTCGAGTGCATTGGCGCAT GCAGTACTATGTTACTATTCAATTGTAGTGCGTTCCTCCTTGACTGTCAA GACTTGCTGGTCCGCTCGGTCGGGAGGCAGATGTTTTTGGAAAGCTTCGA ACGCGAGCAACAGCAACAGTTTGCGCACATCATTGCGTCGGGCGTCTTCA ACATAATACAGAAGCGGCTAACTGCTGCACGCACGGTAGTAGTACAGTAG TAGTATTGCACTGGGCTCCATACGCTTTGACCAACCAACCCTTTCCTTCC ACCGTGCATTCATTTCTCTTGAACCGACCGGCAGTTCGGGCAGAGGGCGA GGCACCAACTGCTGCTCGACCAAGAGATGAGTGGATGCCCCGGCAGACCA AACCTCCTCCTGGCCGCCCTTGGTCCGGGGCTCTCTGCGTGCCTCCTAGA CCTGTTCATGATGAGCGCTGGCCCGAACCTGCGCGGGAAGATCGCTCACG CGGAGATCGATATATTTAGCGCCTTTCCCCCCCCCCCTGGAACAGGTGGG GACGAAGAGAATGGCCATGTCGTAGACGGCAGGACAGGGCCAGGTACTCC CGGCGTCGTTGCCCTCGCGGCTGTCGTTTTTCTCGTCCTCTGCTGGAGGT ACGACCCCGCTTTACAAACCGCGCACGGCGGCGGCGGCAGCGGCGGTAAC GACGGTGACTTGGAGTGTCACCGTGACGAAGCGACCAAGGGAAGTGATAA TTCACGGCGGCTCAACTCTGACGGGTTCGAGAAGGCCCTTCGGAGCTGCG AAGCCCATTGCTCGGAATGGGTGCCCAGGTTCCACCCCCACGAGCTATTG GAGGTCGACTTGCAGGCTTCTTGGGCCGAGTTTGATCTCCTCGCGTTAGT GCTCGAGGCGCGTACCGTGTCGGTCGAAAGGCTCCCTGAGGGCAAAGACA TCGCACGCATGTCCGTAGCGATATCTCCGCACGCCAATGGCGATGCTGTG GCCGCGGCGGCGGCGTGGAGCACAACAAGGGGCGTAACCGTCCAGGAACA AACTGAGGATGAAGATAGAGACAAGCGGACGTTGGAAGGAAATTATCACC TCGCCACGGAGGAAGGCGCAGCGCGGGGGAACTATTCACTGCCGGTATTT CTGACGGTGATCGATAATGCGAGTAGGTTGATGCCATCCGTCGACGAGGC GGAGATGGGGGCCGCCACCCCGCCGTCCGCGGGAACAGGGGGCCGAGCAA ACAAGAAACAGGCCACGGCCGCCCAGACCGGCCTTTTTCCGACCCTTTTC AGGGTGAACAGGGGCCTTCGAGAGCACGGCGTCGCCTTGGGCGGCCGCTT CGAGCGCACGGCAGCCGTGTATACCCGTGGGCAAAAAGGGGAGTGCCCAC CGTCTAGTAGTTACGCGTCGCTCCACCGTGTGAGTGGAGCGGAGTACCAG CGACCCGAACTACCAGCCTCTAACGGGGAGACGTCAGCATTTGCTACCTA CACGCACTCGAGGCGATGTGTGGACTTTGCGGGGTGTAGCCTCACGTGCC TAGAGGGGGGAAAGGGGAGCTCTCTCGAAGGGGCTCCCATGCTCGCCCGC GCGTTGCCTCAGACGATGGAGTCTTCTGCTGCTGCTGCTGCTGCTACAAA AGGTGTAACAGGGGCCACGATTGCCATCGGCCCTACAAATCTGGGGGCAG AAGATGTCCCCACGAGCCAAAGCACGGATGCAAGTGCGCGATCGTGCCGA GGCGGCCATAATTGCGACACGCGCAGCCCCGAGGACGGCGGCAAGAGATC GGTGAGCGCACGAGATGCCGACGGACCCACACCACCAGGAGAAGATGATG CTACTAGCATGCAGGCTAACGGCTATGCTTCGCCTCAAGCGGGTGACGCG TTCTCGACACCGCGGATTCTCTGGCGGCGAAACCGCGAGCCAAGGCGCAT ATCTCCCCCGACGAACGTGGTCACAGCCGCCCCCTTGCCGCAGATAGCCT GCATGGCCGGAATCTGCCGCGTGTGCGCCGACGTCGCGCGGGGTATCCGA GACAGGATCAACGAGTTAGAAGCGCTGATGACGTCGGGAACTGCGCGATC GGGGCACAGGCGCACTTACGCGGCGACTCTTAGCGTCGCCCCAACCCTCT TGCGCTTCCTCGCGTTGACGCAGGCAGCTGTGGAGGCGTTCGTGATCGAG TGGGACGGACAGGAACTCCAAGGTGCTGGTGGTACTTGCACGACGACTGC TGCCAACAACAGTAGGGGCAAAGGTCCACCGTCTTCCCTTTCAGCGTCGA CCGGGGCCCCCGTGGGCGCGATGCCCGTCGGCCCACCACCACCACCGCTT CTTCCGGGCGACGATGATCGCGGATCACGTGCCGCCGTAGGTCCATCCCC GTCACTTACGACGCAAGCAACAAGAACAGCGCCACCAGGCGCGAAGACGC GCTTGGCATTCCTCCGTCGCCTCGCTGCGGTAAACGGTGCCCTTGGCCTG TGTGTTCTTCAGGGAGCTGGCGGGGGCGGAGGAGGAGCTGTGCAGAGGAA GGGATACGTCCAGGCGTTGGGGGAGTTGGCTTCGTTCCTGGAGACGAAAG CGGCCAGACGAGGGTTCGCCGGATTGTGAAACCTGCGCCGCGGTGGGAGT GAAAACGGCCGCACGAACTAACTAACTGAAGACACGTTACAAGATTATGT TTGAATACAATTAACAATAATAACGTTTATTATGTGTATAATACTGAGAA CGAGACTCAGCGTGGCGTGTGCTGATGCTGCTGGCGCACGGCTTCCCTTC CATCTCGTCGCGGTGCAAGTTACGAGTCACGTCTTGATCGTCCACATCGA GGATTATTGCATCAATCAGTGAATTTGTTTCTTTTTACCGTCGGGCTTAT ATTTATCAGGGACCCTAATTACCCCACGCCATATTTATATTTTTTACGTT TTGGTGGAGCGTGCGCACTCTATCGGAGTCTACCGCTTATATTCAACGCT GCAACAAAGGCAAGACATATATACTTAGTTATATCTATACTTCGTATATG AGTGCTTGGATTGAATTCATTCCGCCCGTGAAGGCTTTATCATGACAATA CACGAGAGGGAGGCGCGCCTGCCAATCAACACACAAGGTGGTGTAAAAAC AACTCGCCGAAGGAAGGTGGTGGTGCATTGTATTGTTAATATGTTACTCG ACCCGACATCCCCGACCGCCAAAAATAGGCCCTCTGCCTGGTGGTGGTCC ATTCACTGCGATTTTCCGGCCGTGTTTCGGTTCTCAATTTGCGTTTTGCT GAGATCCGCCTCCGCCACCGCTCGCCGCGCGCTTCACGTCGCTCACAAAC TAAAAGTGAATACCGTGTGAAAACATCGATACGCATAATAAGCCACAGAA CCTATGCTTAGAGTATAATAGTATAGAGCTATCTGCCGAGGAGAGGGCCT GGCCTTTACACGCACACGCACACACACACACATACACACGTGCTAAGCTC CCCTCCTCCTAAACGCTACACGCCATTCCACAAAAAAAAAAAAAGAGGAC AATTTTGCCAGGTAGAAGGAACGAACGGCTACCCAGACTAGAGAGCCGAA CACCTCATGTAACAATACACCTACGGCACGACTAACGACGTGAGGAGGCG ACGCGGCGGACAGGTACAACTCGAGTGGGGCGTTATCACACAAAAACAAC CTCATACAAAACACAGGCAGCGTCCAGTCGCGCGGAAAACACCCAAACCA TTTTTCTCTTGTGTTACCGCCGCCGGCTTTTACTGATTCCCGCCCGCATT ACGCCCGAGCGGGCCTTACCCAAGGCGCTTGAATGAAAACCTACCACCGC TGATACGAACGACCTATTGTCAAGTCTCCCCGCGACAACCGTGTCGTAAC CCTTGCTTGCATCTTCCATCTATGCATACACGCAGACAAAACTCCTGCCA ACAAAATTGAAACACACTTTCATCAAGTAACAGAACAGGGAGACCCCCAT CATCCACCCACCCTCAGTCCGCGTTTTCTAATTTACAGACCCAAACACAA GAGGCCGAGGAGGCCGCCTCTTCCGCGTGGAGCCCCGTTGTTTGATGTTT CGTACTCCCCGACCAAAACACACACACACACCAAGGCTCCGCTTTCTACA ACGTCTGCCCCGCTGCGGTGCCACCATAAGAAAAAGTACGAATTCGCCCG TACGACGCCACAAGCGCGGCCGGTCTGTGTGAAAAATTTAACCGGATCTT CACGGACACGCATCAAAAACGAGCGATTAACCC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig9634:1357..7589+

>mRNA_S-dermatodea_contig9634.17646.1 ID=mRNA_S-dermatodea_contig9634.17646.1|Name=mRNA_S-dermatodea_contig9634.17646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=7248bp|location=Sequence derived from alignment at S-dermatodea_contig9634:1357..7589+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGATACCAAGAGCGGGACTTTTGCGGCAGACTACTTTCAGTCCAGCCC
ATTTCTGCAGAGTCTCGCCATCTTCGTCCGCTCCCAGACAAGGCAAAGCG
TCGGAAGGGAAGCGGATGCCACCTCTCTCGAGTCCAGCGAAAAGCAGGAA
TCCCTTACTTCCCTGACGCCCGAGGTCCTGGCCCAGCTGCTCGTGGTGAG
GAGAGAGGCCGATTCAGAAAGCCGAGGACGGCCGGGATTGCTGACCACAG
CCACGTTCGACAGCAGCACGAGCGCTGCCTTAGTCGAGGAGGATTGGAGC
ATAAACTGGCCATGCGTTAGAATCGCTCCAGACTCACCAGAGGGAGGCGA
AGAATCCCTCGTTGCGGGCGCGCGACTCGCCGTCGCATGCCATGCGGCGC
TCCGGCGTCGAGAAGAAGACCAACAACTACTGTTGCAAACCATGGAACGA
CTGCCTGGCCTTTCCTTCGTGGTAGAGTGGATCGTGCGAGGCGGGTCCGA
CGATGAAACCTATGTCGCGCTGTGCGTCTGTCTCACAGTCCTCGAAAAGG
CGCTCTTTGATATTGATCGTCGGGCAGAAAGCAGGGAGACGGAGACCAAC
TGCTGCGAAACGGCGAGCGCTCACGCTTACGGCAGCGGTGCGACAACTCG
TTGGGAGACCGGGGATGCGAGCGGTATGGGTGGTGAAGGTGGGACTGCGG
AGGTTGCTCCTGCCATGATCTTGCGGGATCTGATTGCGAGTCCCACCGTG
AAGAAGGCTCTGCCCGAACAGATGATGGCGATTCTGCGGCTTCTCCTTCT
GCCGCTGGGGTTCAACATCCGGAACCTCGTGATGGATACCAAGAGCGGGA
CTTTTGCGGCAGACTACTTTCAGTCCAGCCCATTTCTGCAGAGTCTCGCC
ATCTTCGTCCGCTCCCAGACAAGGCAAAGCGTCGGAAGGGAAGCGGATGC
CACCTCTCTCGAGTCCAGCGAAAAGCAGGAATCCCTTACTTCCCTGACGC
CCGAGGTCCTGGCCCAGCTGCTCGTGGTGAGGAGAGAGGCCGATTCAGAA
AGCCGAGGACGGCCGGGATTGCTGACCACAGCCACGTTCGACAGCAGCAC
GAGCGCTGCCTTAGTCGAGGAGGATTGGAGCATAAACTGGCCATGCGTTA
GAATCGCTCCAGACTCACCAGAGGGAGGCGAAGAATCCCTCGTTGCGGGC
GCGCGACTCGCCGTCGCATGCCATGCGGCGCTCCGGCGTCGAGAAGAAGA
CCAACAACTACTGTTGCAAACCATGGAACGACTGCCTGGCCTTTCCTTCG
TGGTAGAGTGGATCGTGCGAGGCGGGTCCGACGATGAAACCTATGTCGCG
CTGTGCGTCTGTCTCACAGTCCTCGAAAAGGCGCTCTTTGATATTGATCG
TCGGGCAGAAAGCAGGGAGACGGAGACCAACTGCTGCGAAACGGCGAGCG
CTCACGCTTACGGCAGCGGTGCGACAACTCGTTGGGAGACCGGGGATGCG
AGCGGTATGGGTGGTGAAGGTGGGACTGCGGAGGTTGCTCCTGCCATGAT
CTTGCGGGATCTGATTGCGAGTCCCACCGTGAAGAAGGCTCTGCCCGAAC
AGATGATGGCGATTCTGCGGCTTCTCCTTCTGCCGCTGGGGTTCAACATC
CGGAACCTCGTGTGGCACGGTTTTCTGGCTCCTCACGAACTGCCGAAGGA
GCTTGCCTCCCTTATCCTTATGGTGACCCTGAGCATCTACGATTCGGTGG
CGCAAGACCAAGATTTGGGCTTGTCGCCGATCCGATCGCTCACGGCGAGC
GAATCCCGCTCTGTGGTGGATTCTGAACTCCTTCCTATGGGCGTGGCGCC
CGAAGTCCTGATCAGCACCACGTGGCACGGTTTTCTGGCTCCTCACGAAC
TGCCGAAGGAGCTTGCCTCCCTTATCCTTATGGTGACCCTGAGCATCTAC
GATTCGGTGGCGCAAGACCAAGATTTGGGCTTGTCGCCGATCCGATCGCT
CACGGCGAGCGAATCCCGCTCTGTGGTGGATTCTGAACTCCTTCCTATGG
GCGTGGCGCCCGAAGTCCTGATCAGCACCACGAACGCGGAAAGTTTCGGT
TGGGCTCTGGATACCTTCGACGACTGCCTTGCGTGCCCGCCTGCCCTTAC
CTTGGCGCTAGAGCTGTTGTTGAGTGAACAGCACTGCGGCGAGCTGTGTG
CTCTAGTCAGGCACTCCGCGTTCTTGCTTCCAGGGAGAGAAGGCATGGCA
CTGCTAGCCCTGCGAGCGCTCGCGGAGGGACGTCACGCTCTGTTCTTGGT
CGCGGTACTTCCGCTCTTGGAGCACGGGCTCCGGTGCATATTCTCCTGTG
CGAACGCATCCCCGGAGCACCTCTTCGCGCATCTGCGGCAGTACTACTCG
ACGTTGGACGGGAACGCGGAAAGTTTCGGTTGGGCTCTGGATACCTTCGA
CGACTGCCTTGCGTGCCCGCCTGCCCTTACCTTGGCGCTAGAGCTGTTGT
TGAGTGAACAGCACTGCGGCGAGCTGTGTGCTCTAGTCAGGCACTCCGCG
TTCTTGCTTCCAGGGAGAGAAGGCATGGCACTGCTAGCCCTGCGAGCGCT
CGCGGAGGGACGTCACGCTCTGTTCTTGGTCGCGGTACTTCCGCTCTTGG
AGCACGGGCTCCGGTGCATATTCTCCTGTGCGAACGCATCCCCGGAGCAC
CTCTTCGCGCATCTGCGGCAGTACTACTCGACGTTGGACGGGTTCGGGCA
GAGGGCGAGGCACCAACTGCTGCTCGACCAAGAGATGAGTGGATGCCCCG
GCAGACCAAACCTCCTCCTGGCCGCCCTTGGTCCGGGGCTCTCTGCGTGC
CTCCTAGACCTGTTCATGATGAGCGCTGGCCCGAACCTGCGCGGGAAGAT
CGCTCACGCGGAGATCGATATATTTAGCGCCTTTCCCCCCCCCCCTGGAA
CAGTTCGGGCAGAGGGCGAGGCACCAACTGCTGCTCGACCAAGAGATGAG
TGGATGCCCCGGCAGACCAAACCTCCTCCTGGCCGCCCTTGGTCCGGGGC
TCTCTGCGTGCCTCCTAGACCTGTTCATGATGAGCGCTGGCCCGAACCTG
CGCGGGAAGATCGCTCACGCGGAGATCGATATATTTAGCGCCTTTCCCCC
CCCCCCTGGAACAGGGCCAGGTACTCCCGGCGTCGTTGCCCTCGCGGCTG
TCGTTTTTCTCGTCCTCTGCTGGAGGTACGACCCCGCTTTACAAACCGCG
CACGGCGGCGGCGGCAGCGGCGGTAACGACGGTGACTTGGAGTGTCACCG
TGACGAAGCGACCAAGGGAAGTGATAATTCACGGCGGCTCAACTCTGACG
GGTTCGAGAAGGCCCTTCGGAGCTGCGAAGCCCATTGCTCGGAATGGGTG
CCCAGGTTCCACCCCCACGAGCTATTGGAGGTCGACTTGCAGGCTTCTTG
GGCCGAGTTTGATCTCCTCGCGTTAGTGCTCGAGGCGCGTACCGTGTCGG
TCGAAAGGCTCCCTGAGGGCAAAGACATCGCACGCATGTCCGTAGCGATA
TCTCCGCACGCCAATGGCGATGCTGTGGCCGCGGCGGCGGCGTGGAGCAC
AACAAGGGGCGTAACCGTCCAGGAACAAACTGAGGATGAAGATAGAGACA
AGCGGACGTTGGAAGGAAATTATCACCTCGCCACGGAGGAAGGCGCAGCG
CGGGGGAACTATTCACTGCCGGTATTTCTGACGGTGATCGATAATGCGAG
TAGGTTGATGCCATCCGTCGACGAGGCGGAGATGGGGGCCGCCACCCCGC
CGTCCGCGGGAACAGGGGGCCGAGCAAACAAGAAACAGGCCACGGCCGCC
CAGACCGGCCTTTTTCCGACCCTTTTCAGGGTGAACAGGGGCCTTCGAGA
GCACGGCGTCGCCTTGGGCGGCCGCTTCGAGCGCACGGCAGCCGTGTATA
CCCGTGGGCAAAAAGGGGAGTGCCCACCGTCTAGTAGTTACGCGTCGCTC
CACCGTGTGAGTGGAGCGGAGTACCAGCGACCCGAACTACCAGCCTCTAA
CGGGGAGACGTCAGCATTTGCTACCTACACGCACTCGAGGCGATGTGTGG
ACTTTGCGGGGTGTAGCCTCACGTGCCTAGAGGGGGGAAAGGGGAGCTCT
CTCGAAGGGGCTCCCATGCTCGCCCGCGCGTTGCCTCAGACGATGGAGTC
TTCTGCTGCTGCTGCTGCTGCTACAAAAGGTGTAACAGGGGCCACGATTG
CCATCGGCCCTACAAATCTGGGGGCAGAAGATGTCCCCACGAGCCAAAGC
ACGGATGCAAGTGCGCGATCGTGCCGAGGCGGCCATAATTGCGACACGCG
CAGCCCCGAGGACGGCGGCAAGAGATCGGTGAGCGCACGAGATGCCGACG
GACCCACACCACCAGGAGAAGATGATGCTACTAGCATGCAGGCTAACGGC
TATGCTTCGCCTCAAGCGGGTGACGCGTTCTCGACACCGCGGATTCTCTG
GCGGCGAAACCGCGAGCCAAGGCGCATATCTCCCCCGACGAACGTGGTCA
CAGCCGCCCCCTTGCCGCAGATAGCCTGCATGGCCGGAATCTGCCGCGTG
TGCGCCGACGTCGCGCGGGGTATCCGAGACAGGATCAACGAGTTAGAAGC
GCTGATGACGTCGGGAACTGCGCGATCGGGGCACAGGCGCACTTACGCGG
CGACTCTTAGCGTCGCCCCAACCCTCTTGCGCTTCCTCGCGTTGACGCAG
GCAGCTGTGGAGGCGTTCGTGATCGAGTGGGACGGACAGGAACTCCAAGG
TGCTGGTGGTACTTGCACGACGACTGCTGCCAACAACAGTAGGGGCAAAG
GTCCACCGTCTTCCCTTTCAGCGTCGACCGGGGCCCCCGTGGGCGCGATG
CCCGTCGGCCCACCACCACCACCGCTTCTTCCGGGCGACGATGATCGCGG
ATCACGTGCCGCCGTAGGTCCATCCCCGTCACTTACGACGCAAGCAACAA
GAACAGCGCCACCAGGCGCGAAGACGCGCTTGGCATTCCTCCGTCGCCTC
GCTGCGGTAAACGGTGCCCTTGGCCTGTGTGTTCTTCAGGGAGCTGGCGG
GGGCGGAGGAGGAGCTGTGCAGAGGAAGGGATACGTCCAGGCGTTGGGGG
AGTTGGCTTCGTTCCTGGAGACGAAAGCGGCCAGACGAGGGTTCGCCGGA
TTGTGAGGCCAGGTACTCCCGGCGTCGTTGCCCTCGCGGCTGTCGTTTTT
CTCGTCCTCTGCTGGAGGTACGACCCCGCTTTACAAACCGCGCACGGCGG
CGGCGGCAGCGGCGGTAACGACGGTGACTTGGAGTGTCACCGTGACGAAG
CGACCAAGGGAAGTGATAATTCACGGCGGCTCAACTCTGACGGGTTCGAG
AAGGCCCTTCGGAGCTGCGAAGCCCATTGCTCGGAATGGGTGCCCAGGTT
CCACCCCCACGAGCTATTGGAGGTCGACTTGCAGGCTTCTTGGGCCGAGT
TTGATCTCCTCGCGTTAGTGCTCGAGGCGCGTACCGTGTCGGTCGAAAGG
CTCCCTGAGGGCAAAGACATCGCACGCATGTCCGTAGCGATATCTCCGCA
CGCCAATGGCGATGCTGTGGCCGCGGCGGCGGCGTGGAGCACAACAAGGG
GCGTAACCGTCCAGGAACAAACTGAGGATGAAGATAGAGACAAGCGGACG
TTGGAAGGAAATTATCACCTCGCCACGGAGGAAGGCGCAGCGCGGGGGAA
CTATTCACTGCCGGTATTTCTGACGGTGATCGATAATGCGAGTAGGTTGA
TGCCATCCGTCGACGAGGCGGAGATGGGGGCCGCCACCCCGCCGTCCGCG
GGAACAGGGGGCCGAGCAAACAAGAAACAGGCCACGGCCGCCCAGACCGG
CCTTTTTCCGACCCTTTTCAGGGTGAACAGGGGCCTTCGAGAGCACGGCG
TCGCCTTGGGCGGCCGCTTCGAGCGCACGGCAGCCGTGTATACCCGTGGG
CAAAAAGGGGAGTGCCCACCGTCTAGTAGTTACGCGTCGCTCCACCGTGT
GAGTGGAGCGGAGTACCAGCGACCCGAACTACCAGCCTCTAACGGGGAGA
CGTCAGCATTTGCTACCTACACGCACTCGAGGCGATGTGTGGACTTTGCG
GGGTGTAGCCTCACGTGCCTAGAGGGGGGAAAGGGGAGCTCTCTCGAAGG
GGCTCCCATGCTCGCCCGCGCGTTGCCTCAGACGATGGAGTCTTCTGCTG
CTGCTGCTGCTGCTACAAAAGGTGTAACAGGGGCCACGATTGCCATCGGC
CCTACAAATCTGGGGGCAGAAGATGTCCCCACGAGCCAAAGCACGGATGC
AAGTGCGCGATCGTGCCGAGGCGGCCATAATTGCGACACGCGCAGCCCCG
AGGACGGCGGCAAGAGATCGGTGAGCGCACGAGATGCCGACGGACCCACA
CCACCAGGAGAAGATGATGCTACTAGCATGCAGGCTAACGGCTATGCTTC
GCCTCAAGCGGGTGACGCGTTCTCGACACCGCGGATTCTCTGGCGGCGAA
ACCGCGAGCCAAGGCGCATATCTCCCCCGACGAACGTGGTCACAGCCGCC
CCCTTGCCGCAGATAGCCTGCATGGCCGGAATCTGCCGCGTGTGCGCCGA
CGTCGCGCGGGGTATCCGAGACAGGATCAACGAGTTAGAAGCGCTGATGA
CGTCGGGAACTGCGCGATCGGGGCACAGGCGCACTTACGCGGCGACTCTT
AGCGTCGCCCCAACCCTCTTGCGCTTCCTCGCGTTGACGCAGGCAGCTGT
GGAGGCGTTCGTGATCGAGTGGGACGGACAGGAACTCCAAGGTGCTGGTG
GTACTTGCACGACGACTGCTGCCAACAACAGTAGGGGCAAAGGTCCACCG
TCTTCCCTTTCAGCGTCGACCGGGGCCCCCGTGGGCGCGATGCCCGTCGG
CCCACCACCACCACCGCTTCTTCCGGGCGACGATGATCGCGGATCACGTG
CCGCCGTAGGTCCATCCCCGTCACTTACGACGCAAGCAACAAGAACAGCG
CCACCAGGCGCGAAGACGCGCTTGGCATTCCTCCGTCGCCTCGCTGCGGT
AAACGGTGCCCTTGGCCTGTGTGTTCTTCAGGGAGCTGGCGGGGGCGGAG
GAGGAGCTGTGCAGAGGAAGGGATACGTCCAGGCGTTGGGGGAGTTGGCT
TCGTTCCTGGAGACGAAAGCGGCCAGACGAGGGTTCGCCGGATTGTGA
back to top