mRNA_S-dermatodea_contig9617.17631.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9617.17631.1
Unique NamemRNA_S-dermatodea_contig9617.17631.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE)

HSP 1 Score: 629 bits (1623), Expect = 3.250e-207
Identity = 415/682 (60.85%), Postives = 458/682 (67.16%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQK-------SLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALE------------------------ERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRPDGGAGGADYADRLADLERERNSIELEKEQI--------------CALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHSGEGGEMEG-GVDQLLSQERKAAVPITTLP-----------------DAPTQ-------ACGGVVFLSRSPGVHLCKSYSNQQQRPSTAPHPSIASATSPSSHGXXXXXXXXXXXXXXXXXXXMTST--------AVGG----VGNSSAAQVPGTSAKTAGPGDKKRQYPHQDALLTSPRFKPHPLMQPTLFSTDDPAGGVPLNEAGLLA---GGAGGVGEXXXXXXXXXXXXXXDRKGHGKGRDMGKADRGTRMLNAWEKIEELEALVESNRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQV 1794
            QSET YTDE+GE++ P+ LRQ+LRKAGS ERE+LL +LE +ARQTFKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAK+IKNQP+VNEDFDQK       SLLRKYERELKRLRAELEERSRNLVDKRQLL+VEGERRRAEADKMAAIRALE                        ERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR DGGA G DYADRLADLERERN+IELEKEQ+               AL   L  NE    L+EDALDMRTQQLFHLQKALV+H G G E    G DQ+ +    AA   +T+P                 D+P         A G   FLS  P +H  +                  S +S  S                      +ST        +V G      N S  +   T A   G  ++    P ++ L++ PRFKPH LMQPTLFSTDDPAGGV  ++ G+L+   G  GG G+ XXXXXXX       R G G          G ++LNAWEKIEELE LVES+RSHNERLL+DLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQ+
Sbjct:  559 QSETSYTDEKGEKMSPETLRQLLRKAGSQEREALLRKLETNARQTFKVGKLNLVDLAGSERVRLSGATGQRLRESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKVCQKQTDSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALETAWGSCLQDPIDLSRTFVAFAYIQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRL--NERDDALIEDALDMRTQQLFHLQKALVMHGGNGAEGGNVGDDQVCA----AASDASTIPGHSGRSNLDRRTLDGWIDSPGATAAATKVAAGSDKFLSVRPALHNRQQXXXXXXXXXXXXXXXXXSFSSGKSSNVNFEAPEPLGGRRCGDAGVSSSTTPTELHYRSVSGNTIFSPNGSTTKGSATPAAVFGGREEAHNPPLEEELISFPRFKPHALMQPTLFSTDDPAGGVSFHDGGILSREDGEQGGEGDRXXXXXXXGRGEALKRAGVG----------GAKLLNAWEKIEELEGLVESSRSHNERLLKDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQI 1224          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: D7FRU8_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU8_ECTSI)

HSP 1 Score: 473 bits (1218), Expect = 1.790e-161
Identity = 256/281 (91.10%), Postives = 271/281 (96.44%), Query Frame = 1
Query:    1 VQSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRPDGGAGGADYADRLADLERERNSIELEKEQI 843
            +QSET YTDE+GE++ P+ LRQ+LRKAGS ERE+LL +LE +ARQTFKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAK+IKNQP+VNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLL+VEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR DGG  G DYADRLADLERERN+IELEKEQ+
Sbjct:    1 MQSETSYTDEKGEKMSPETLRQLLRKAGSPEREALLRKLETNARQTFKVGKLNLVDLAGSERVRLSGATGQRLRESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGTEGVDYADRLADLERERNTIELEKEQV 281          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A024T9G2_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9G2_9STRA)

HSP 1 Score: 350 bits (897), Expect = 8.590e-106
Identity = 219/381 (57.48%), Postives = 257/381 (67.45%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMI-----GRGRRPDGGAGGA-----------------------------DYADRLADLERERNSIELEK----------------------------EQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHS 960
            QS+T Y D  G+ I P+    ++            S+LE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE++VE+LST+KFA+RAK+IKN+  VNED DQKSLLRKYERELKRLRAELEE++RN+VDKR+LL ++ +RRRAE DKMAAIRALE+RSLEF  EKEEK+ LE RI MLT QM+      +G   DG +                                +Y  RLADLE+ER +IE EK                            EQI AL DELDA + HQ+ LE+ LD +T QL HLQ+  + H+
Sbjct:  247 QSQTTYVDTAGKEIPPEEFTALVNTQARDR-----SKLESLVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVIAALTDTRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAIVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRKYERELKRLRAELEEKNRNVVDKRRLLELDEQRRRAEEDKMAAIRALEQRSLEFMLEKEEKKKLEQRIIMLTSQMLMSHGKQKGANDDGSSXXXXXXXGENEFSTEDPQFRIALKEQQDRIRKEYECRLADLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLNERDEQIMALQDELDAYDRHQKSLEEKLDEKTAQLIHLQRVTMEHN 622          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A482S6I9_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6I9_9ARCH)

HSP 1 Score: 336 bits (861), Expect = 9.750e-105
Identity = 206/363 (56.75%), Postives = 252/363 (69.42%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRPDGGAGGA----------------------DYADRLADLERERNSIELEK----------------------------EQICALNDELDANEAHQELLEDALDMRTQQLFHLQK 942
            QSET Y D+RG  + P+  +Q + K G H RE  ++R+E   +Q FKVGKLNLVDLAGSERV  SGATGQRL+ESK+IN+SL+ LG VISALT+ + RQHIPYR+SKLTR+LEDSLGGNCKTTMMAMISPA+E+M+ET+ST+KFA+RAK+IKN+  VNED DQKSLLRKYERELK+LRAELEERS+N+VDKR+LL ++ +RRRAEADK+AAIRALE RSLEF +EKEEK+ LE RI+ LT QMI RG   D     +                      +Y D+LA LE+ER +IE EK                            EQI AL DELDA + H + LE+ LD +T     LQ+
Sbjct:   50 QSETVYVDDRGNELTPEDFQQFMHKRGIH-REQDMARMEDHVKQAFKVGKLNLVDLAGSERVERSGATGQRLEESKQINKSLTMLGYVISALTEAKDRQHIPYRNSKLTRMLEDSLGGNCKTTMMAMISPAMEAMLETISTLKFANRAKNIKNEAKVNEDLDQKSLLRKYERELKQLRAELEERSKNVVDKRRLLELDEQRRRAEADKIAAIRALEARSLEFMQEKEEKKKLEARISQLTNQMI-RGHHVDTSKLNSSNNSLVDGSNEVVKEQQDRLRQEYEDKLAGLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLVERDEQIMALQDELDAYDRHHKELEEKLDEKTALCIKLQR 410          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A7S1CJY2_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJY2_9STRA)

HSP 1 Score: 339 bits (870), Expect = 6.840e-104
Identity = 212/361 (58.73%), Postives = 253/361 (70.08%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGR--------------RPDGGAGGADYADRLADLERERNSIELEK----------------------------EQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHS 960
            QSET Y D  G+ +  +   +++ K+ +H  ++ L  LE + RQ+FKVGKLNLVDLAGSERVRL+GATGQRL+ESKKINQSLSAL NVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCK+TMMAMISPALE+  E+LST+KFA+RAKSIKN+  +NED DQKSLLR+YERELKRLRAELEERSRN+VDKR++L +E ++RRAE DKMAAIR LE RS  F REK EKR LE RI+ML GQ++  G               R    A   +Y DR+  LERER SIE EK                            EQI AL DELDA + HQ+ LE+ LD +T  L HLQ+  + H+
Sbjct:  349 QSETTYLDNDGKEMSTEDFHKLV-KSRAHG-DAGLKALEANVRQSFKVGKLNLVDLAGSERVRLTGATGQRLEESKKINQSLSALNNVIAALTDPRGRQHIPYRDSKLTRILEDSLGGNCKSTMMAMISPALEAFAESLSTLKFANRAKSIKNEARINEDVDQKSLLRRYERELKRLRAELEERSRNVVDKRKVLELEEQKRRAEEDKMAAIRELEARSRAFMREKAEKRKLEQRISMLQGQVLIGGTPKNMKDTPAFRAALREHQDALRKEYEDRMQRLERERESIEEEKAQVDRYKQLLLKQRDIMIMLTQRLNERDEQIMALQDELDAYDRHQKDLEEKLDSKTAALIHLQRVTMEHA 707          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A2P4XR10_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XR10_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.230e-103
Identity = 255/582 (43.81%), Postives = 324/582 (55.67%), Query Frame = 1
Query:  112 RLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR---PDGGAGGAD-------------------------YADRLADLERERNSIELEKEQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHSGEGGEMEGGVDQLLSQERKAAVPITTLPDAPTQACGGVVFLSRSPGVHLCKSYSNQQQRPSTAPHPSIASATSPSSHGXXXXXXXXXXXXXXXXXXXMTSTAVGGVGNSSAAQVPGTSAKTAGPGDKKRQYPHQDALLTSPRFKPHPLMQPTLFSTDDPAGGVPLNEAGLLAGGAGGVGEXXXXXXXXXXXXXXDRKGHGKGRDMGKADRGTRMLNAWEKIEELEALVESNRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEAR 1773
            +LE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAM+SPALE+M E+LST+KFA+RAK IKN+  VNED DQKSLLRKYERELKRLRAELEERSRN+VDKR+LL ++ +RRRAE DKMAAIRALEERS EF REKEEK+ LE RI+ LT QM+   +R   P  G  GA+                         Y  RLADLE+ER +IE EK Q+                       R +QL   Q+ +++           + Q L++  +                            HL        QR        +A   + +S G                   + +    G G + AA  P  SA + G    +   P  + L+T  +F+PHP+         DP   V +N+       +  +G                               G+ +L+A EKI+EL  LV++  + ++R+ ++LE+V+++KVS+E+ +REKLE+LVQ E+EAR
Sbjct:  186 KLEAMVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVISALTDARGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMVSPALEAMTESLSTLKFANRAKHIKNEARVNEDLDQKSLLRKYERELKRLRAELEERSRNVVDKRRLLELDEQRRRAEEDKMAAIRALEERSREFMREKEEKKRLEQRISALTSQMLMSNQRRLTPTAGLSGAESEALNVEDPLIRDAIKEHQDRIRQEYECRLADLEKERETIEEEKAQVD----------------------RYKQLLLKQRDIMI----------ALTQRLNERDEQITXXXXXXXXXXXXXXXXXXXXXXKTAHLI-----HLQR--------VAMEHNANSPGKIDAEL-------------LKALGDWGGGTAHAAMAP--SATSGG----RVSEPPAELLITHKQFRPHPV---------DP---VIINDNNYSNNNSSHIGS------------------------------GSILLSAEEKIQELRTLVDAQSAEHQRMAKELEDVKSEKVSVEFQMREKLEKLVQVELEAR 661          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A662YDQ5_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDQ5_9STRA)

HSP 1 Score: 346 bits (887), Expect = 6.380e-103
Identity = 257/593 (43.34%), Postives = 323/593 (54.47%), Query Frame = 1
Query:  100 SLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR--PDG---GAGGAD-------------------------YADRLADLERERNSIELEKEQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHSGEGGEMEGGVDQLLSQERKAAVPITTLPDAPTQACGGVVFLSRSPGVHLCKSYSNQQQRPSTAPHPSIASATSPSSHGXXXXXXXXXXXXXXXXXXXMTSTAVGGVGNSSAAQVPGTSAKTAGPGDKKRQYPHQDALLTSPRFKPHPLMQPTLFSTDDPAGGVPLNEAGLLAGGAGGVGEXXXXXXXXXXXXXXDRKGHGKGRDMGKADRGTRMLNAWEKIEELEALVESNRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMH 1788
            +L  +LE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE+M E+LST+KFA+RAK IKN+  VNED DQKSLLRKYERELKRLRAELEERSRN+VDKR+LL ++ +RRRAE DKMAAIRALEERS EF REKEEK+ LE RI+ LT QM+  G+R  P      AGG +                         Y  RLADLE+ER +IE EK Q+                     D   Q L   +  ++  +    E +  +                      +    ++ L R    H                     +A+SP                           A GG  + +A      SAKTAGP         Q+ L+T  +++PH +    +   +D  G   L+ A    G                                        +L+A EK++EL  LV++  + ++R+ ++LE+V+++KVS+E+LLREKLE+LVQ E+EAR+  M+
Sbjct:  457 ALHPKLEAMVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVISALTDARGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAMTESLSTLKFANRAKHIKNEARVNEDLDQKSLLRKYERELKRLRAELEERSRNVVDKRRLLELDEQRRRAEEDKMAAIRALEERSREFMREKEEKKRLEQRISTLTSQMLMSGQRRLPSSTSLAAGGGEAEAFDPEDPLIRDAIKEHQDRIRQEYECRLADLEKERETIEEEKAQV---------------------DRYKQLLLKQRDIMIALTQRLNERDEQITXXXXXXXXXXXXXXXXXXXXXEKTAHLIHLQRVTMEH---------------------NASSPGK---------------INTELLKALGAWGGSASHTAVAPAAASAKTAGP--------PQELLITHKQYRPHAVDPVIVNDNNDSNGNNNLHHASGAPG----------------------------------------LLSAEEKMQELRTLVDTQTAEHQRMAKELEDVKSEKVSVEFLLREKLEKLVQVELEARLKAMN 944          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A0P1ARB4_PLAHL (Kinesin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARB4_PLAHL)

HSP 1 Score: 343 bits (880), Expect = 1.530e-102
Identity = 218/389 (56.04%), Postives = 256/389 (65.81%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHER-----------------ESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRP--DGGAGGAD-----------------------YADRLADLERERNSIELEK----------------------------EQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHS 960
            QS+T Y D +G  + P+    ++    + +                   +L  +LE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAM+SPALE+M E+LST+KFA RAK IKN+  VNED DQKSLLRKYERELKRLRAEL+ERSRN+VDKR+LL ++ +RRRAE DKMAAIRALEERSLEF REKEEK+ LE RI+ LT QM+   +R    G   G +                       Y  RLADLE+ER +IE EK                            EQI AL DELDA + +Q+ LE+ LD +T  L HLQ+  + H+
Sbjct:  371 QSKTAYVDAKGNDVAPEEFMALVNAYQARQNGGSTSTTGTGGKSLNGIAALHPKLESMIRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVISALTDARGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMVSPALEAMTESLSTLKFAHRAKHIKNEARVNEDLDQKSLLRKYERELKRLRAELDERSRNVVDKRRLLELDEQRRRAEEDKMAAIRALEERSLEFMREKEEKKRLEQRISALTSQMLMSSQRRLIPGATEGEETLNVEDPLIKDALKEHQDRIRQEYECRLADLEKERETIEEEKAQVDRYKLLLLKQRDIMIALTQRLNERDEQITALQDELDAYDRYQKELEEKLDEKTAHLIHLQRVAMEHN 759          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A5A8D575_CAFRO (Kinesin-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D575_CAFRO)

HSP 1 Score: 333 bits (854), Expect = 1.190e-101
Identity = 208/365 (56.99%), Postives = 250/365 (68.49%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRPDGGAGGAD------------------YADRLADLERERNSIELEK----------------------------EQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHS 960
            QSET Y DE G+ +  +   +++ K+ +H  + L  RLE + RQ FKVGKLNLVDLAGSERVRL+GATGQRL+ES+KINQSLS+LGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE+ VE+LST+KFA+RAK+IKN+  VNED DQKSLLR+YEREL+RLR ELEERSRN+VDKR+LL ++ +       KMAAIRALE RS EF REKEEK+ LEGRI+ L GQM+       GG G  D                  Y  +L +LE+ER S+E EK                            +QI AL DELDA + HQ  LE+ LD +T  L HLQ+  + H+
Sbjct:  361 QSETTYLDEDGQELSVEQFHRLV-KSRAHGDDGL-KRLEANVRQMFKVGKLNLVDLAGSERVRLTGATGQRLEESRKINQSLSSLGNVIAALTDPRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAFVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRRYERELRRLRTELEERSRNVVDKRRLLELDEQXXXXXXXKMAAIRALEARSREFLREKEEKKRLEGRISALQGQML------TGGEGVTDTPAFRNALKEHQEKIRAKYDAKLHELEKERESMEEEKAQVDRYKQLLLKQRDIMILLTQRLNERDDQIVALQDELDAYDRHQRELEEKLDEKTAALIHLQRVALEHN 717          
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Match: A0A6G0XNB0_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNB0_9STRA)

HSP 1 Score: 337 bits (865), Expect = 4.850e-101
Identity = 259/618 (41.91%), Postives = 329/618 (53.24%), Query Frame = 1
Query:    4 QSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKSIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMI---GRGRRP---DGGAGGA---------------------DYADRLADLERERNSIELEKEQICALNDELDANEAHQELLEDALDMRTQQLFHLQKALVLHSGEGGEMEGGVDQLLSQERKAAVPITTLPDAPTQACGGVVFLSRSPGVHLCKSYSNQQQRPSTAPHPSIASATSPSSHGXXXXXXXXXXXXXXXXXXXMTSTAVGGVGNSSAAQVPGTSAKTAGPGDKKRQYPHQDALLTSPRFKPHPLMQPTLFSTDDPAGGVPLNEAGLLAGGAGGVGEXXXXXXXXXXXXXXDRKGHGKGRDMGKADRGTRMLNAWEKIEELEALVESNRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARV 1776
            QS+T Y D  G  IG D    ++    +H      S+L+   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE++VE+LST+KFA+RAK+IKN+  VNED DQKSLLRKYERELKRLRAELEE++RN+VDKR+LL ++ +RRRAE DKMAAIRALE+RSLEF  EKEEK+ LE RI MLT QM+   G+   P   DG  GG                      +Y  RLADLE+ER +IE EK Q+      L         L   L+ R +Q+                     D+  +Q                     ++ L R    H                     +A+SP+ +                        A+G  G     Q+P                P    L+T+ +F PH          D  A    LN+                                     + KA+    +L+A EKI EL+ +V++  + + R L++L+EV+ +KVS+EY +REKLE+ VQ+E++AR+
Sbjct:  325 QSQTTYVDTAGREIGADEFTALV---NTHHASRDRSKLDSLVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVIAALTDTRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAIVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRKYERELKRLRAELEEKNRNVVDKRRLLELDEQRRRAEEDKMAAIRALEQRSLEFMLEKEEKKKLEQRIIMLTSQMLMSHGKSTAPKDNDGANGGEFSIEDPQFRLALKEQQDRIRKEYECRLADLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLNERDEQIXXXXXXXXXXXXXXXXXXXXXDEKTAQ---------------------LIHLQRVTMEH---------------------NASSPNKNAELIR-------------------ALGEWGFKQTQQLP----------------PGAAQLMTTKQFAPH---------HDGAADNNQLNKT------------------------------------INKAE----LLSAEEKIYELQGVVDARSADHARALKELDEVRAEKVSLEYAMREKLEKRVQAEVDARL 813          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9617.17631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9W7_9PHAE3.250e-20760.85Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D7FRU8_ECTSI1.790e-16191.10Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A024T9G2_9STRA8.590e-10657.48Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A482S6I9_9ARCH9.750e-10556.75Kinesin motor domain-containing protein (Fragment)... [more]
A0A7S1CJY2_9STRA6.840e-10458.73Kinesin-like protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2P4XR10_9STRA2.230e-10343.81Kinesin-like protein n=1 Tax=Phytophthora palmivor... [more]
A0A662YDQ5_9STRA6.380e-10343.34Kinesin motor domain-containing protein n=1 Tax=No... [more]
A0A0P1ARB4_PLAHL1.530e-10256.04Kinesin-like protein n=1 Tax=Plasmopara halstedii ... [more]
A0A5A8D575_CAFRO1.190e-10156.99Kinesin-like protein n=1 Tax=Cafeteria roenbergens... [more]
A0A6G0XNB0_9STRA4.850e-10141.91Kinesin-like protein n=2 Tax=Aphanomyces euteiches... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9617contigS-dermatodea_contig9617:784..8133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.9
Seed ortholog evalue1.7e-132
Seed eggNOG ortholog2880.D7FRU8
KEGG koko:K20196
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG4280@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons10
Model size1797
Cds size1797
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9617.17631.1prot_S-dermatodea_contig9617.17631.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9617 784..8133 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925420.7245092-CDS-S-dermatodea_contig9617:783..9271622925420.7245092-CDS-S-dermatodea_contig9617:783..927Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 784..927 +
1694079921.3959408-CDS-S-dermatodea_contig9617:783..9271694079921.3959408-CDS-S-dermatodea_contig9617:783..927Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 784..927 +
1622925420.7363126-CDS-S-dermatodea_contig9617:1817..20201622925420.7363126-CDS-S-dermatodea_contig9617:1817..2020Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 1818..2020 +
1694079921.41493-CDS-S-dermatodea_contig9617:1817..20201694079921.41493-CDS-S-dermatodea_contig9617:1817..2020Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 1818..2020 +
1622925420.7511444-CDS-S-dermatodea_contig9617:2472..26201622925420.7511444-CDS-S-dermatodea_contig9617:2472..2620Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 2473..2620 +
1694079921.427313-CDS-S-dermatodea_contig9617:2472..26201694079921.427313-CDS-S-dermatodea_contig9617:2472..2620Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 2473..2620 +
1622925420.7660573-CDS-S-dermatodea_contig9617:3061..32171622925420.7660573-CDS-S-dermatodea_contig9617:3061..3217Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 3062..3217 +
1694079921.445421-CDS-S-dermatodea_contig9617:3061..32171694079921.445421-CDS-S-dermatodea_contig9617:3061..3217Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 3062..3217 +
1622925420.776779-CDS-S-dermatodea_contig9617:3764..38871622925420.776779-CDS-S-dermatodea_contig9617:3764..3887Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 3765..3887 +
1694079921.4593112-CDS-S-dermatodea_contig9617:3764..38871694079921.4593112-CDS-S-dermatodea_contig9617:3764..3887Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 3765..3887 +
1622925420.7862246-CDS-S-dermatodea_contig9617:4938..50041622925420.7862246-CDS-S-dermatodea_contig9617:4938..5004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 4939..5004 +
1694079921.4702713-CDS-S-dermatodea_contig9617:4938..50041694079921.4702713-CDS-S-dermatodea_contig9617:4938..5004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 4939..5004 +
1622925420.7958136-CDS-S-dermatodea_contig9617:5996..60441622925420.7958136-CDS-S-dermatodea_contig9617:5996..6044Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 5997..6044 +
1694079921.4807286-CDS-S-dermatodea_contig9617:5996..60441694079921.4807286-CDS-S-dermatodea_contig9617:5996..6044Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 5997..6044 +
1622925420.8129349-CDS-S-dermatodea_contig9617:6367..66041622925420.8129349-CDS-S-dermatodea_contig9617:6367..6604Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 6368..6604 +
1694079921.4927728-CDS-S-dermatodea_contig9617:6367..66041694079921.4927728-CDS-S-dermatodea_contig9617:6367..6604Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 6368..6604 +
1622925420.8225188-CDS-S-dermatodea_contig9617:7150..76951622925420.8225188-CDS-S-dermatodea_contig9617:7150..7695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 7151..7695 +
1694079921.5059924-CDS-S-dermatodea_contig9617:7150..76951694079921.5059924-CDS-S-dermatodea_contig9617:7150..7695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 7151..7695 +
1622925420.8341064-CDS-S-dermatodea_contig9617:8006..81331622925420.8341064-CDS-S-dermatodea_contig9617:8006..8133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 8007..8133 +
1694079921.5196006-CDS-S-dermatodea_contig9617:8006..81331694079921.5196006-CDS-S-dermatodea_contig9617:8006..8133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9617 8007..8133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9617.17631.1

>prot_S-dermatodea_contig9617.17631.1 ID=prot_S-dermatodea_contig9617.17631.1|Name=mRNA_S-dermatodea_contig9617.17631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=599bp
VQSETCYTDERGERIGPDALRQMLRKAGSHERESLLSRLEKDARQTFKVG
KLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQ
HIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAK
SIKNQPVVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLYVEG
ERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR
PDGGAGGADYADRLADLERERNSIELEKEQICALNDELDANEAHQELLED
ALDMRTQQLFHLQKALVLHSGEGGEMEGGVDQLLSQERKAAVPITTLPDA
PTQACGGVVFLSRSPGVHLCKSYSNQQQRPSTAPHPSIASATSPSSHGGG
GLSSLPPSGRRPPNNSTMTSTAVGGVGNSSAAQVPGTSAKTAGPGDKKRQ
YPHQDALLTSPRFKPHPLMQPTLFSTDDPAGGVPLNEAGLLAGGAGGVGE
VGGGGEGGGKGPEGDRKGHGKGRDMGKADRGTRMLNAWEKIEELEALVES
NRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQV*
back to top

mRNA from alignment at S-dermatodea_contig9617:784..8133+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9617.17631.1 ID=mRNA_S-dermatodea_contig9617.17631.1|Name=mRNA_S-dermatodea_contig9617.17631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7350bp|location=Sequence derived from alignment at S-dermatodea_contig9617:784..8133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTTCAGAGTGAGACATGCTACACGGATGAGCGAGGGGAGAGGATAGGCCC CGACGCCTTGAGGCAGATGCTGAGGAAGGCGGGATCTCACGAGCGCGAGT CCCTGCTAAGTAGGCTGGAAAAGGACGCACGGCAGACGTTCAAGGTACGA TTGAAAGAGGCACGAAAGTAAGATACCCGTACTCGATACACAGCCGATCT GCCAGTGTTGGGGCCGGTCCCATACCTCCTGCGGTTACTTCAGCAGTACC AGTGATTTTTCTCTTTCAATAACAGTAGTTTGGCGAAAGAGTCATTTGTT GCTAACGCTCCGCTGGGACGGAAACGTGTTTCCCTTCTCGCTGTGTTTGA GGTCGTTCCCATGGCCCAATTACAGGGTACGTGAAATCAGTGGTGAGCAC CCCACGAACACAAATTTAAGTACCTCTTCCGAACTCCCTGCCTGCTGTGG GGAACGTCCTCTACCGCACGCCCCGCCCCCCTTTCGGCCTAAACGTTCCT ATAAAGCCGGAAGTGAGAAACTCAAAAGGCCTCACCTGGACAGGGTGCAG CGAATCTAGCGCAGTATTTGCATTAACACGATGTGTCCGTTTTGCAGAAG ACGTGTGATAAAAATGTGTGCACTGGGGAGGGCATCCCCTTTCCCCCCTT TTCCCGATAAGGGACCATTTTTCCGCACCCCGTTGGGACGGGTTCAGTGG AGAGATTCCTAACGCCAATTCCTCTCCAAATTGCCGGGAACGTGAAGGAA AACCAGACCTGATCGACCTCGTGCAATGCTTTCTAATTCCTTGTCGAATT CGTTTCATTTTCGAGCTACGGGCGTACTTCAGTTCCCGTCGGTGGTCGCA TGTCGCAAATGAGGTAATTCCACCTCCCATCCCACCCCTTACCTCTTACG TCCACCGTGCATTGAAATATGCGGACTGACTTGCTTAAGGTGCAAATCGT CATCAAGTGTCCATACCGAGGACGCATTTGCAGAGTCCGTTCTTCCCCAC GACAATTGATGCCCCCTGTCTGCCGCCGATAAAGGTCGGGAAGTTAAATC TGGTCGACCTTGCGGGGTCCGAGCGAGTGAGGCTGTCGGGAGCTACGGGC CAGCGCCTGCAAGAGAGCAAGAAGATCAATCAGTCGTTGTCGGCGCTGGG GAACGTCATATCGGCGCTTACGGACCATCGGGGACGGCAACATATCCCGT ACCGAGATTCGAAGCTCACTCGGATATTGGAGGACAGGTACTCGCGGTGG TAGCAGTTGTCATGGGTTGGAGTATGTGCCGTTCGCACAATAACACGTTT TGCACAGAACGTGCCAGTTTTAGGCAACCCGTCCTGCCAATGCCAGATGA AGCGATGTTGCGTTAGAGCTTGCGGCATAAGACAACTTAATATATCAACA TGCTGTTGCTTAATGCTAGCGTTCGCCGAACGGGTGCCGGTAGCCTCTGA AAGTTGCCGTAACATTGCCCCCACCCTGCCCCTTTATGAAACGATCAGGT AGCCCCATTGCATTTGTCAAAGAAGCGCGAGAAGAGTAAAAGGCGGCCAA GAGGCTCCTCCACGACTACTGAATTCGCCGCAGCAATTCCCCCCGCGTCC CTGCTCTGCTCCCCTTGCCAATCGTCCCACCATCCCTTTTTCGCGATTCT TGACGTACGATCTCGTGCGAAAACTGCGACCTAAAGCAGCTTGGGAGGTA ACTGCAAAACTACGATGATGGCAATGATCAGTCCAGCGCTGGAGAGCATG GTCGAAACTCTGTCGACCGTGAAGTTCGCCAGTAGGGCCAAGAGCATCAA GAACCAGCCCGTCGTCAACGAGGATTTTGACCAGAAGGTAGGAGGCGTTC CTGTGATATGGCAAGCGAGAAAGTGGCGGGCAGAGACGTGGAGGCGTCAG GAGGCCTTGGACTAACGAGGGGGGATGGGCACACATCAAAGCGCCAGAAA AATAACGGATGTCAACATGAACCATTAAAGGTGTAACAGTTTTCCGGTAC ATATTTAAAATGTACTCGTTGGAATAGTAGTACGGTGAGTTGAGCGAAAC CATCAACCAGCCGAGTCGTTAGAAAGGGCTAGGCGAGATGTTGTGGAGTG CGGGAAGAGGGAGCTTGATCCAGAAGAGGAGGCCCAAAAAGCTCCTATGA CCCCACAAGCAAGAATAAAATGTGCCTCTTCTATACAGGAAATAACTTTG AGAGGGTAAGAAGAGAAACACCATCGACGAGCCAGGCTATAACCCGCTCC CCGCCTCGGTTTTCGAATCCTTCAACAGTCGTTGCTGAGAAAATACGAAC GTGAACTCAAGCGGCTCAGAGCGGAGCTCGAGGAGCGGAGTCGGAACCTC GTGGACAAGCGGCAGCTGCTGTACGTAGAGGGAGAGAGGCGGCGCGCGGA AGCCGACAAGATGGCTGCCATTCGCGCCTTAGAGGTGAACGACTCAGGCA CATTGTGATTAGTGTAGAGGTGATGTACGGGCACTGCCTTCGTGCGTACT CGGGATGAACCTTCTTTTGCTGGTGACGAGCACGTAGGATGTGGAGCACG TTTTGAGTGCCGTGCAATATTATATCTCATGTAGATGAGGTTTTCGATTG TAATAAACGTGTGTTGGTAGGGGGTTTCGTTCAGAATTTTTGTTTAATTT TCAGCATTTGCGAAGGGTGGGGAGTGCGGAGGATAGGCGTTTTCATGTCT GTCGACTGCGTTGCTGCAAGCGGCCCCGTTGTGCAGGGTAGGATGCCATG GCTCAAGCCCTCTCGTCGAGTTGCCGCGAAACCAGCATGCGGAATGTACG ACACGCAGCAAGGGTGCACGTGCGCCAGTCTACAAAATATTTCGTTCTTG CATCTCACGGGGCCCTCTTGAATTGAAGCGTCGCCTCGCCTTCGGTGTCG AAACCCGAAAGAGTACTCTTCTCCCCGCCACTGGCTACATCCGCCAACGA ATCCTCAATACACCCGACGACCATCTCACAGGAACGGTCACTAGAATTCC AACGAGAAAAGGAAGAGAAACGCCTGCTAGAGGGTCGTATCGCCATGCTC ACCGGACAAATGATCGGAAGGGGCAGGCGTCCAGATGGAGGCGCAGGAGG CGCGGTGAGCGCGGTGAGAGCGAGGAGTGGTGCACCCCCCCCCTGTCGAT GCCGGATGTAGCAAGGCCGTGCACACGTTTTCATCCGCAGCTCGGTTTTG ACATGCGTCATATTTCCATTGCTAAACCATTGCGTAGACCGTACATAATA GCCCCGGTCACAATACGCCCCTAGTCGTCACTCGGTAAGAACTTACACTA CAATACTGTGCTGGGTGCGTGTTCTGGTTGCGTGTCGCCTCCGTGTCAGG CTGTGCTCGGAAAATGTTTCGGTTTCGGTTGCACCCGGTTGCTTTGCATG TAGGGGCGCGACAGGGAAAGGGGTTGCCGCGTCCTTCCTTTCGAAGCTTG GAATTTTGGTTGTGTATTGTATAGCTCAATATATAGTTTAGTGTAGTGGC TTGCTGAAGGAAAAGGCAACGCGATATTATCGGCCGCGATGCCACTGTCG GTGGGGGGTGCTCCGTGGAGTGCTTCCCCTTCCAAACCGCCAAGGGTTTT ACATGTTTTAGAGCTGCCATAACGAATACACCCACGGGCACAAATAAAGT ATATCCTCTCGGGCAACTAGCAGGAGGCCCGGTCGATCAATGCTGCACGG CTGATTTTACGCCGTTATCGTTTCTGCTTCATTAAAACCAATATACGGCA AAATGCTACATCGCTTTACGAGGACGATGATGGTCCAAAAAATGATGAAT TTCAGTGCAGCTCCGGCCGTCATCGTAATGGTTAGGCTATATAAGCGCGA TTATCTCGTGAACGCATACGCGCTGTGCATCAAGAACGAACGTACCTCGA AGTAAGCCTTTCCACGGGACTCGAGCAGTAGATTCATTCGTACCAATGAT TAATTTCAGTGCAACTCCGGCCGTCGTCGTAATGGTTAGGCTATATAAGC ACGATTATCTCGTGAACGCATACGCGCTGTGCATCAAGAACGAACGTTCT TCACTCACCTCGAAATAAGCCTTTCCACGTGACTCGAACAGTCGATTCAT TCGTACCACCTCACGTTAGGAATTTTCACGCGTTGCTTGTCTCGTGCTGC TACAGGACTACGCCGACCGGCTCGCGGACCTAGAGCGTGAGCGAAACAGC ATCGAGTTGGAAAAGGAACAGGTGCGAACGGCACATTTCGACGAGGATAC GCCGGGACGGGACGGGGGGCGGGGTTTGAGTATTGCCTATTTTGTCGTAC CATCTGCGAACTGCCGCCCCAAGGGGTTGCGGCAGCATATATTGCGTGGG GGCACAGGGAGTGGGGGGGGGGGGGTGTCTCCTGAGACAAGTCTCCGCGG TATTCCAATATGCTTTGTTAAAGGGGGCGGCGGGGATCGGCAGCGTATCG CGGCGCTTCTCGGATGCCCCTTTGGCAATTTATAGCTTCGGCCTTGTTTT GGGCTATATATCGCTCTTGGTTTATCGCACCCGGGTCGCGATTCTCGTAC AGCGTTCTGCGCTATTATTGCGGCAAGTTCAAAACACGTACGTAGCTGGA GACTATATCCATGATGGAGCTGATTGTCTCTCCCCTTCCTCTTGTATCGA TGCCTCGTCCTTCATACAACATAAACAGGTGGAGAGGTACAAGCAGCTCT TGATGAAACAGAGAGACATAATGATAGCGTTAACGCAGCGCCTCAACGAA AGAGACGACGCGGTAAGCTCTCGGCCGCAGAGGGACATAATGCATGAAGG GAAGATATATTATACGTCGTGTAATTACTTCGTGTGTACGATGTAGAGAG TTCCGTTGTTTTTCTCGATCTCTAGCTTTCCCATCCGACCACGAGCGGCA TCGGCAACCATTCGCGGCCCGGTCGGTGTTAAGCGTTATAGTAAATCAAA AGCAATGTACCGATCACGTGGCATGGATGCGCAAAGCTGTGCAAGAGAGC AGCTGAAGTCACACCCAAAACCCGCGTTTCTCAACGCCTCTCCGCGTGTA ATCCCGACTGCACTGCGTTTCTCTCCGCGTGTAACCCCGACTGCACTGCG TTTTTCCCAACGCACTCGCGTGCGGTGTACGTGGCAAATCTACTGCTGGC TGATACCCTCCGACACAATTTACGCAACTGCAACTGCCCCCCCCTCCTGG TTGCGTGCAACAGATCTGCGCATTGAACGACGAATTGGATGCGAACGAAG CACACCAGGAGGTATTTATTACTTGCACCCGATATATCCGAATGCCGTCG ATACATTTTCTAGCACGAATACACAACGTGATCGAGGGGGCCTACTGGCT TGCCGGCGTTCTGTCCATGCGCTGACCAAGAACACCTAGAGCTCAGCCAT GCGCAAGCCCTAGTGTCCCTCGTAGACACTTCAACAGGTGCCACTCGTGA AGCGAGATCCTTTGACACAAAAACTTGCTTCGAAGCGGCCGAGGAATAAC CCCGCTATCTCTGGTGGTGATACCAGCCAAACTGCGATATGTGACTGTCA GTGAACGCCGTGTTGCTGCTCCGACTTTTTTCAGCTGTTGGAAGATGCAC TCGACATGCGCACCCAGCAGCTCTTTCACCTTCAGAAGGCTTTGGTGCTA CACAGCGGCGAAGGAGGGGAGATGGAAGGGGGTGTCGACCAGCTGCTATC CCAGGAAAGAAAAGCTGCTGTGCCGATTACCACGCTTCCTGATGCCCCAA CACAAGCTTGTGGGGGTGTTGTTTTCCTTTCTAGGTCGCCGGGCGTTCAC TTGTGCAAATCGTATTCAAACGTCGTGTGCAGCAGCTACTTATATCAAAC GCATGGTCTCAACTAGCCCGCACCCATGTGCATGCGTGCGCACCTTATTT CAGCTTTAAGTGGCAAGCGAGCAATGCGGGGCAGGCATTTAAAGTTGACA ATTCGGACGATAATGTTTGCCGACCTATGAGGTAGCACCGCGTGCTACCG GATAGTAATACCAACAACTGGGCATTTCCCAAAGGGTTCTACGCTAGCAC CGTCGGTAAGTGATGCACGGGCGGAGCAAACCATACGCACAGATATATCA CGGTCAGGATAGGATTGACCCTGCTTGTTCCCCAAGCAGCTCAAGGTCGC CCTATTGCCGTGCCGATTCGTTCAACGAGCTCCTACAGCGCTAGTCACGC TAAAATAATGGCGCCCTTGGAATCCTTCGGCCCAGAAAAATACTGACCAT GCAGTTGAAGGCCCTATACAAGGATTTTAACGTTTTGTCATCCGCGGTGA TCCTCAGGCGTTTGAAGGGACGCTAGGAACAGCAGCCGTGGTGTCTCCAC GCTCCGCTCCGCACCAGCAGCAGCAACGGCCGTCCACGGCCCCCCATCCT AGCATCGCCAGCGCCACAAGCCCCAGCTCCCACGGCGGGGGGGGGCTGTC ATCGCTGCCACCGTCTGGTCGCCGGCCTCCTAACAACAGCACCATGACCT CAACGGCAGTAGGCGGCGTCGGTAACAGTTCCGCGGCGCAAGTACCAGGG ACGTCGGCGAAAACAGCCGGGCCCGGGGACAAAAAGCGTCAATACCCGCA TCAAGATGCCCTCCTCACGTCGCCGAGGTTCAAGCCGCACCCGCTTATGC AACCGACACTGTTCAGTACCGACGATCCCGCAGGTGGAGTTCCCCTAAAC GAGGCCGGTCTTCTTGCAGGAGGGGCCGGGGGGGTCGGGGAAGTCGGCGG CGGCGGAGAGGGGGGGGGGAAGGGTCCGGAAGGCGACCGAAAAGGTCATG GTAAAGGTCGGGATATGGGAAAAGCTGATAGGGGGACAAGGATGCTGAAC GCATGGGAGAAAATCGAGGAGTTGGAAGCGTTGGTCGAGTCAAACCGTTC TCACAATGAGAGGTAAGGAAAAAGAGGATGGAATGGTGATGGGCATCGCG AAAGTTGCGGCTTGTATGTAGGCGCTTCTTACCGTGGCACTTTCTTGCGT TCCTCATGCGATCGCCGCCCTCTGATGCCCCACAGCGTACTGCTCTCTCG AGACGCGCAGAGGAAACACTGTCGCTATCGTACGCGTTTGACACAAAGGC AGGTGGTTCTCTCCCCAACAAGCTTGCGTCAGCAATCCAACTTTAAGGTG GAACCCCAAAACCTTCAGACAGCCAAACTGTGAAACCACGTCGTACTGAG ATAATCCTTTCGTATTTTCGCAGATTGTTGGAAGATCTGGAGGAAGTGCA GACGGACAAGGTTTCCATGGAGTACCTCCTCCGAGAGAAGCTGGAGCGGC TGGTGCAGTCCGAGATCGAGGCCAGGGTCGCCCGCATGCACCAGGTTTGA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig9617:784..8133+

>mRNA_S-dermatodea_contig9617.17631.1 ID=mRNA_S-dermatodea_contig9617.17631.1|Name=mRNA_S-dermatodea_contig9617.17631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3594bp|location=Sequence derived from alignment at S-dermatodea_contig9617:784..8133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTTCAGAGTGAGACATGCTACACGGATGAGCGAGGGGAGAGGATAGGCCC
CGACGCCTTGAGGCAGATGCTGAGGAAGGCGGGATCTCACGAGCGCGAGT
CCCTGCTAAGTAGGCTGGAAAAGGACGCACGGCAGACGTTCAAGGTTCAG
AGTGAGACATGCTACACGGATGAGCGAGGGGAGAGGATAGGCCCCGACGC
CTTGAGGCAGATGCTGAGGAAGGCGGGATCTCACGAGCGCGAGTCCCTGC
TAAGTAGGCTGGAAAAGGACGCACGGCAGACGTTCAAGGTCGGGAAGTTA
AATCTGGTCGACCTTGCGGGGTCCGAGCGAGTGAGGCTGTCGGGAGCTAC
GGGCCAGCGCCTGCAAGAGAGCAAGAAGATCAATCAGTCGTTGTCGGCGC
TGGGGAACGTCATATCGGCGCTTACGGACCATCGGGGACGGCAACATATC
CCGTACCGAGATTCGAAGCTCACTCGGATATTGGAGGACAGGTCGGGAAG
TTAAATCTGGTCGACCTTGCGGGGTCCGAGCGAGTGAGGCTGTCGGGAGC
TACGGGCCAGCGCCTGCAAGAGAGCAAGAAGATCAATCAGTCGTTGTCGG
CGCTGGGGAACGTCATATCGGCGCTTACGGACCATCGGGGACGGCAACAT
ATCCCGTACCGAGATTCGAAGCTCACTCGGATATTGGAGGACAGCTTGGG
AGGTAACTGCAAAACTACGATGATGGCAATGATCAGTCCAGCGCTGGAGA
GCATGGTCGAAACTCTGTCGACCGTGAAGTTCGCCAGTAGGGCCAAGAGC
ATCAAGAACCAGCCCGTCGTCAACGAGGATTTTGACCAGAAGCTTGGGAG
GTAACTGCAAAACTACGATGATGGCAATGATCAGTCCAGCGCTGGAGAGC
ATGGTCGAAACTCTGTCGACCGTGAAGTTCGCCAGTAGGGCCAAGAGCAT
CAAGAACCAGCCCGTCGTCAACGAGGATTTTGACCAGAAGTCGTTGCTGA
GAAAATACGAACGTGAACTCAAGCGGCTCAGAGCGGAGCTCGAGGAGCGG
AGTCGGAACCTCGTGGACAAGCGGCAGCTGCTGTACGTAGAGGGAGAGAG
GCGGCGCGCGGAAGCCGACAAGATGGCTGCCATTCGCGCCTTAGAGTCGT
TGCTGAGAAAATACGAACGTGAACTCAAGCGGCTCAGAGCGGAGCTCGAG
GAGCGGAGTCGGAACCTCGTGGACAAGCGGCAGCTGCTGTACGTAGAGGG
AGAGAGGCGGCGCGCGGAAGCCGACAAGATGGCTGCCATTCGCGCCTTAG
AGGAACGGTCACTAGAATTCCAACGAGAAAAGGAAGAGAAACGCCTGCTA
GAGGGTCGTATCGCCATGCTCACCGGACAAATGATCGGAAGGGGCAGGCG
TCCAGATGGAGGCGCAGGAGGCGCGGAACGGTCACTAGAATTCCAACGAG
AAAAGGAAGAGAAACGCCTGCTAGAGGGTCGTATCGCCATGCTCACCGGA
CAAATGATCGGAAGGGGCAGGCGTCCAGATGGAGGCGCAGGAGGCGCGGA
CTACGCCGACCGGCTCGCGGACCTAGAGCGTGAGCGAAACAGCATCGAGT
TGGAAAAGGAACAGGACTACGCCGACCGGCTCGCGGACCTAGAGCGTGAG
CGAAACAGCATCGAGTTGGAAAAGGAACAGATCTGCGCATTGAACGACGA
ATTGGATGCGAACGAAGCACACCAGGAGATCTGCGCATTGAACGACGAAT
TGGATGCGAACGAAGCACACCAGGAGCTGTTGGAAGATGCACTCGACATG
CGCACCCAGCAGCTCTTTCACCTTCAGAAGGCTTTGGTGCTACACAGCGG
CGAAGGAGGGGAGATGGAAGGGGGTGTCGACCAGCTGCTATCCCAGGAAA
GAAAAGCTGCTGTGCCGATTACCACGCTTCCTGATGCCCCAACACAAGCT
TGTGGGGGTGTTGTTTTCCTTTCTAGGTCGCCGGGCGTTCACTTGTGCAA
ATCGTATTCAAACCTGTTGGAAGATGCACTCGACATGCGCACCCAGCAGC
TCTTTCACCTTCAGAAGGCTTTGGTGCTACACAGCGGCGAAGGAGGGGAG
ATGGAAGGGGGTGTCGACCAGCTGCTATCCCAGGAAAGAAAAGCTGCTGT
GCCGATTACCACGCTTCCTGATGCCCCAACACAAGCTTGTGGGGGTGTTG
TTTTCCTTTCTAGGTCGCCGGGCGTTCACTTGTGCAAATCGTATTCAAAC
CAGCAGCAACGGCCGTCCACGGCCCCCCATCCTAGCATCGCCAGCGCCAC
AAGCCCCAGCTCCCACGGCGGGGGGGGGCTGTCATCGCTGCCACCGTCTG
GTCGCCGGCCTCCTAACAACAGCACCATGACCTCAACGGCAGTAGGCGGC
GTCGGTAACAGTTCCGCGGCGCAAGTACCAGGGACGTCGGCGAAAACAGC
CGGGCCCGGGGACAAAAAGCGTCAATACCCGCATCAAGATGCCCTCCTCA
CGTCGCCGAGGTTCAAGCCGCACCCGCTTATGCAACCGACACTGTTCAGT
ACCGACGATCCCGCAGGTGGAGTTCCCCTAAACGAGGCCGGTCTTCTTGC
AGGAGGGGCCGGGGGGGTCGGGGAAGTCGGCGGCGGCGGAGAGGGGGGGG
GGAAGGGTCCGGAAGGCGACCGAAAAGGTCATGGTAAAGGTCGGGATATG
GGAAAAGCTGATAGGGGGACAAGGATGCTGAACGCATGGGAGAAAATCGA
GGAGTTGGAAGCGTTGGTCGAGTCAAACCGTTCTCACAATGAGAGCAGCA
GCAACGGCCGTCCACGGCCCCCCATCCTAGCATCGCCAGCGCCACAAGCC
CCAGCTCCCACGGCGGGGGGGGGCTGTCATCGCTGCCACCGTCTGGTCGC
CGGCCTCCTAACAACAGCACCATGACCTCAACGGCAGTAGGCGGCGTCGG
TAACAGTTCCGCGGCGCAAGTACCAGGGACGTCGGCGAAAACAGCCGGGC
CCGGGGACAAAAAGCGTCAATACCCGCATCAAGATGCCCTCCTCACGTCG
CCGAGGTTCAAGCCGCACCCGCTTATGCAACCGACACTGTTCAGTACCGA
CGATCCCGCAGGTGGAGTTCCCCTAAACGAGGCCGGTCTTCTTGCAGGAG
GGGCCGGGGGGGTCGGGGAAGTCGGCGGCGGCGGAGAGGGGGGGGGGAAG
GGTCCGGAAGGCGACCGAAAAGGTCATGGTAAAGGTCGGGATATGGGAAA
AGCTGATAGGGGGACAAGGATGCTGAACGCATGGGAGAAAATCGAGGAGT
TGGAAGCGTTGGTCGAGTCAAACCGTTCTCACAATGAGAGATTGTTGGAA
GATCTGGAGGAAGTGCAGACGGACAAGGTTTCCATGGAGTACCTCCTCCG
AGAGAAGCTGGAGCGGCTGGTGCAGTCCGAGATCGAGGCCAGGGTCGCCC
GCATGCACCAGGTTTGAATTGTTGGAAGATCTGGAGGAAGTGCAGACGGA
CAAGGTTTCCATGGAGTACCTCCTCCGAGAGAAGCTGGAGCGGCTGGTGC
AGTCCGAGATCGAGGCCAGGGTCGCCCGCATGCACCAGGTTTGA
back to top