mRNA_S-dermatodea_contig96096.17626.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: D7G0P8_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.310e-31 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYIGEMSP AVRGVLVS+KEAMIVVGML GYSIGW+LEDTV GWR TYGAG+ PAV M GMF MPPSAR
Sbjct: 175 APAYIGEMSPAAVRGVLVSLKEAMIVVGMLFGYSIGWYLEDTVAGWRFTYGAGAFPAVIMFAGMFLMPPSAR 246
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A836CC74_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC74_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.490e-26 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYIGEMSPP++RG+LV MKEA IVVG+L+GY +G+ LEDTVGGWR +YG PA+ LVGM+FMPPSAR
Sbjct: 171 APAYIGEMSPPSIRGLLVGMKEAFIVVGILIGYVVGYLLEDTVGGWRTSYGIAVGPALIQLVGMYFMPPSAR 242
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A7S0STX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STX7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.030e-22 Identity = 43/72 (59.72%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYIGEM+P +RG+LVS+KE +V+GM+ GY+IG++ +TVGGWR TYG GS+ +V ML GM ++P SAR
Sbjct: 39 APAYIGEMAPSQIRGLLVSLKEGFVVLGMVFGYTIGYFFSETVGGWRYTYGFGSIISVIMLFGMIYLPYSAR 110
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A835ZBD5_9STRA (General substrate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.550e-21 Identity = 45/72 (62.50%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYIGEMSPP++RG LV +KEA IVVG+LLGY +G+ E T GGWR+ Y PA+ GMF MPPSAR
Sbjct: 164 APAYIGEMSPPSIRGFLVGLKEAFIVVGILLGYIMGFAFEGTGGGWRVIYALAMGPAILQFAGMFLMPPSAR 235
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A7I3YWM5_PHYPA (MFS domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I3YWM5_PHYPA) HSP 1 Score: 86.7 bits (213), Expect = 2.770e-19 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
AP YI E SP +RG LVS+KEA+IVVG LLGY IGWW D+VGGWR +G ++ A M +GM+++PP R
Sbjct: 4 APMYIAETSPSEIRGTLVSLKEALIVVGTLLGYLIGWWEIDSVGGWRFMFGFSALIAAVMGLGMWWLPPCPR 75
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A7S2UXZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXZ9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.820e-19 Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
AP+YI EM+PP VRG+LVS+KE +IV+G+L+GY +G+ E TVGGW YGA + AV M VG + +PPSAR
Sbjct: 157 APSYIAEMAPPDVRGLLVSLKEGLIVLGILMGYVVGYAYESTVGGWGFIYGASCLMAVIMAVGTWLLPPSAR 228
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A7S2FR46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FR46_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.800e-18 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
AP YI EM+P +RG LV++KEAMIVVGM+LGY IG++L+ G W+ TYGA AV MLVG+ +PPSAR
Sbjct: 148 APTYIAEMAPSEIRGTLVALKEAMIVVGMVLGYGIGFFLQHQSGAWKFTYGASIPLAVFMLVGVTALPPSAR 219
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: F0Y6Q9_AURAN (General sugar transporter n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q9_AURAN) HSP 1 Score: 83.2 bits (204), Expect = 5.530e-17 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
AP+YI EMSP A+RG LVS+KEA IVVG+ LGY +G+ L +T GGWR TY A A+ + G + +PPSAR
Sbjct: 141 APSYIAEMSPAAIRGTLVSLKEAAIVVGICLGYGLGFALRETAGGWRYTYAASIPLALLLYWGAYCLPPSAR 212
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A059LQT5_9CHLO (Sugar transporter n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LQT5_9CHLO) HSP 1 Score: 82.8 bits (203), Expect = 7.890e-17 Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYI E SP VRG+++S+KE ++VVG+LLGY + + D VGGWR YG G++PA+ + GM F+P S R
Sbjct: 174 APAYIAETSPAHVRGLMISLKEGLVVVGILLGYVVSFVFVDAVGGWRWMYGLGALPALALGCGMLFLPESPR 245
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Match: A0A8J9WKA5_9CHLO (D-xylose-proton symporter-like 3, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKA5_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 4.470e-15 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 APAYIGEMSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAVGMLVGMFFMPPSAR 216
APAYI E +P VRG+L+S+KEA +V+G+LLGY + D VGGWR YG + PA+ +L GM ++P S R
Sbjct: 170 APAYIAEAAPAKVRGLLISLKEAFVVIGILLGYLTSYLFIDDVGGWRAMYGLAAGPALILLAGMSWLPDSPR 241 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96096.17626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig96096.17626.1 >prot_S-dermatodea_contig96096.17626.1 ID=prot_S-dermatodea_contig96096.17626.1|Name=mRNA_S-dermatodea_contig96096.17626.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp MSPPAVRGVLVSMKEAMIVVGMLLGYSIGWWLEDTVGGWRITYGAGSVPAback to top mRNA from alignment at S-dermatodea_contig96096:153..371- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig96096.17626.1 ID=mRNA_S-dermatodea_contig96096.17626.1|Name=mRNA_S-dermatodea_contig96096.17626.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at S-dermatodea_contig96096:153..371- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig96096:153..371- >mRNA_S-dermatodea_contig96096.17626.1 ID=mRNA_S-dermatodea_contig96096.17626.1|Name=mRNA_S-dermatodea_contig96096.17626.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at S-dermatodea_contig96096:153..371- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |