mRNA_S-dermatodea_contig9594.17611.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: D8LD91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD91_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.390e-37 Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 2
Query: 20 EADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFSK 241
+AD R ECWFCLASPQLEDHLVCSVADE+YLAQPKGGLVPGHVLIVPVSHQQRYSELSAEG +EAE+YKESF +
Sbjct: 251 KADGRLECWFCLASPQLEDHLVCSVADEIYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGAKEAEQYKESFKR 324
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: A0A836CFA8_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFA8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.420e-22 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 2
Query: 20 EADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYK 226
E D ++ECWFCLASP LE+HLV +VA+E Y+A PKGGLVP HVLIVP++H QRYSELS +E E +K
Sbjct: 600 EGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFK 668
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: A0A7S2F7S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7S3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.420e-19 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 2
Query: 11 HHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFS 238
H+ + R +CWFCLASPQLE HL+ SVA+ VYLA PKGG+VP HVL+VP+ H R S+L E RYK+ +
Sbjct: 114 HNTPSFERHDCWFCLASPQLEAHLIVSVAEHVYLAIPKGGMVPQHVLLVPIDHVTRQSDLGPPVLSELLRYKQGLA 189
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: UPI00097D8B1D (CWF19-like protein 1 n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097D8B1D) HSP 1 Score: 87.4 bits (215), Expect = 8.080e-19 Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESF 235
QP HP+ P CWFCLASPQ+E HLV S+ YLA KGGL P HVLI+P+ H Q ELS+E E E+YK +
Sbjct: 90 QPRRHPQ--PTGPCWFCLASPQVEKHLVISIGSHCYLALAKGGLTPHHVLILPIGHYQSVVELSSEVVEEMEKYKSAL 165
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: UPI00148DF2B5 (CWF19-like protein 1 n=2 Tax=Hippoglossus TaxID=8266 RepID=UPI00148DF2B5) HSP 1 Score: 87.8 bits (216), Expect = 1.940e-18 Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFS 238
QP HP+ P CWFCLASPQ+E HLV S+ YLA KGGL P HVLI+P+ H Q ELS+E E E+YK + +
Sbjct: 333 QPRRHPQ--PTGPCWFCLASPQVEKHLVISIGSHCYLAVAKGGLTPHHVLILPIGHYQSVVELSSEVVEEMEKYKSALT 409
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: A0A3P8UWD1_CYNSE (CWF19 like cell cycle control factor 1 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8UWD1_CYNSE) HSP 1 Score: 87.4 bits (215), Expect = 2.660e-18 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESF 235
QP HHP+ P CWFCLASPQ+E HLV S+ + Y+A KGGL P HVLI+P+ H Q +LS+E E ++YK +
Sbjct: 335 QPRHHPQ--PTGPCWFCLASPQVEKHLVISIGEHCYVALAKGGLTPRHVLILPIGHYQSVVDLSSEVVEEMKKYKSAL 410
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: A0A8D3ADA0_SCOMX (Uncharacterized protein n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3ADA0_SCOMX) HSP 1 Score: 87.4 bits (215), Expect = 2.670e-18 Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFS 238
QP HP+ P CWFCLASPQ+E HLV S+ YLA KGGL P HVLI+P+ H Q ELS+E E E+YK + +
Sbjct: 345 QPRRHPQ--PTGPCWFCLASPQVEKHLVISIGTHCYLALAKGGLTPHHVLILPIGHYQSVVELSSEVVEEMEKYKSALT 421
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: C3Y265_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3Y265_BRAFL) HSP 1 Score: 87.0 bits (214), Expect = 3.570e-18 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query: 17 PEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFSK 241
P P CWFCLASP++E HLV SV D YLA KGGLVP HVLI+P+ H Q E++AE E E+YK + K
Sbjct: 315 PPPKPTGPCWFCLASPEVEKHLVVSVGDHTYLALAKGGLVPDHVLILPIGHYQSMVEVTAEVHEEIEKYKSALRK 389
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: I3JUF7_ORENI (Uncharacterized protein n=27 Tax=Cichlidae TaxID=8113 RepID=I3JUF7_ORENI) HSP 1 Score: 87.0 bits (214), Expect = 3.620e-18 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYKESFSK 241
QP HP+ P CWFCLASPQ+E HLV S+ YLA KGGL P HVLI+P+ H Q +LS+E E E+YK + K
Sbjct: 328 QPRRHPQ--PSGPCWFCLASPQVEKHLVISIGTHCYLALAKGGLTPRHVLILPIGHYQSVVDLSSEVVEEMEKYKSALRK 405
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Match: UPI001BD3DAD1 (CWF19-like protein 1 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD3DAD1) HSP 1 Score: 87.0 bits (214), Expect = 3.630e-18 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query: 2 QPGHHPEADPRQECWFCLASPQLEDHLVCSVADEVYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGTREAERYK 226
QP HP+ P CWFCLASPQ+E HLV S+ YLA+ KGGL P HVLI+P+ H Q +LS+E E E+YK
Sbjct: 336 QPRRHPQ--PTGPCWFCLASPQVEKHLVISIGSHCYLAKAKGGLTPQHVLILPIGHYQSVVDLSSEVVEEMEKYK 408 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9594.17611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9594.17611.1 >prot_S-dermatodea_contig9594.17611.1 ID=prot_S-dermatodea_contig9594.17611.1|Name=mRNA_S-dermatodea_contig9594.17611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp AARAPPRGRSSTGMLVLPRLSAAGGPSRLLGRRRGLPRPTQGRLGPGARAback to top mRNA from alignment at S-dermatodea_contig9594:658..1592- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9594.17611.1 ID=mRNA_S-dermatodea_contig9594.17611.1|Name=mRNA_S-dermatodea_contig9594.17611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=935bp|location=Sequence derived from alignment at S-dermatodea_contig9594:658..1592- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9594:658..1592- >mRNA_S-dermatodea_contig9594.17611.1 ID=mRNA_S-dermatodea_contig9594.17611.1|Name=mRNA_S-dermatodea_contig9594.17611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig9594:658..1592- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |