mRNA_S-dermatodea_contig95691.17590.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 113 bits (283), Expect = 4.630e-27 Identity = 50/98 (51.02%), Postives = 72/98 (73.47%), Query Frame = 3
Query: 15 LDDAEVATFADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWS 308
+D AE +F +A+H+FPTN ADD NW RL LG IA I+A H++ G ++ +DRFR L+ +L+L+ A V +N+NVWT+GG+ANGA G++VHM W+
Sbjct: 1387 VDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWA 1484
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A6S7JG41_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JG41_PARCT) HSP 1 Score: 69.7 bits (169), Expect = 1.120e-11 Identity = 33/94 (35.11%), Postives = 59/94 (62.77%), Query Frame = 3
Query: 30 VATFADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSV 311
+ F DA+ L+ +N+Q + N+++L QL IA+INA H+ +++S + LQ LY+S+ A VM+ N+W + G+ NG+ G +V + ++V
Sbjct: 464 IDEFEDAVRLYYSNKQGAEYNYNKLKQLNQPIAIINACHSGNQAKHISLQQLFGLQPCLYISKGAKVMLTLNLWPSLGLCNGSTGTVVDIIYAV 557
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A8H5KS06_9HYPO (ATP-dependent DNA helicase n=1 Tax=Fusarium pseudoanthophilum TaxID=48495 RepID=A0A8H5KS06_9HYPO) HSP 1 Score: 66.6 bits (161), Expect = 1.400e-10 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 3
Query: 3 MRCELDDAEVATFADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHW 305
++ +L + EVATF DA+ +FPTN Q + N + QL N + I A H+ + + + +L L + A VM+ N+WTA G+ NGA G + + W
Sbjct: 1603 VKSKLTEEEVATFDDALRIFPTNLQVREFNRSHMEQLNNAVIQIAATHSNQFGNDAESSVAGNLHKTLPICIGARVMLTENLWTAMGLVNGAVGIVEDLAW 1703
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A6S7GL72_PARCT (ATP-dependent DNA helicase PIF1 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GL72_PARCT) HSP 1 Score: 62.0 bits (149), Expect = 2.650e-9 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
FADAI L+ + + N+ +L QLG +A I A+H+ G ++D L A L+LS A VM+ NVW G+ NG+ G + + W E+
Sbjct: 4 FADAIRLYFDQKSVAEYNYLKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTKAEVMLTCNVWAEVGLCNGSFGTIEQI-WFAEN 95
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: UPI0010699F95 (ATP-dependent DNA helicase PIF1-like isoform X6 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010699F95) HSP 1 Score: 61.6 bits (148), Expect = 7.520e-9 Identity = 31/93 (33.33%), Postives = 52/93 (55.91%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F+DAI L+ + + N+++L ++G + I A+H+ RG ++D L+A L+LS A VM+ N+W G+ NG+ G V W E+
Sbjct: 361 FSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTKAEVMLTCNLWAEVGLCNGSFG-TVEQFWFAEN 452
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: UPI00106C135D (ATP-dependent DNA helicase PIF1-like isoform X5 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C135D) HSP 1 Score: 61.6 bits (148), Expect = 7.680e-9 Identity = 31/93 (33.33%), Postives = 52/93 (55.91%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F+DAI L+ + + N+++L ++G + I A+H+ RG ++D L+A L+LS A VM+ N+W G+ NG+ G V W E+
Sbjct: 527 FSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTKAEVMLTCNLWAEVGLCNGSFG-TVEQFWFAEN 618
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A6S7HMN7_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HMN7_PARCT) HSP 1 Score: 61.6 bits (148), Expect = 7.750e-9 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F DAI L+ + + N+++L QLG +A I A+H+ G ++D L A L+LS A VM+ N+W G+ NG+ G + + W E+
Sbjct: 651 FTDAIRLYFDKKSVAEYNYEKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTKAEVMLTCNLWAEVGLCNGSFGTIEQI-WFAEN 742
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: A0A6S7FUF4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FUF4_PARCT) HSP 1 Score: 61.6 bits (148), Expect = 7.760e-9 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F DAI L+ + + N+++L QLG +A I A+H+ G ++D L A L+LS A VM+ N+W G+ NG+ G + + W E+
Sbjct: 552 FTDAIRLYFDKKSVAEYNYEKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTKAEVMLTCNLWAEVGLCNGSFGTIEQI-WFAEN 643
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: UPI00106A333B (uncharacterized protein LOC114544315 isoform X1 n=6 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A333B) HSP 1 Score: 61.6 bits (148), Expect = 7.830e-9 Identity = 31/93 (33.33%), Postives = 52/93 (55.91%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F+DAI L+ + + N+++L ++G + I A+H+ RG ++D L+A L+LS A VM+ N+W G+ NG+ G V W E+
Sbjct: 815 FSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTKAEVMLTCNLWAEVGLCNGSFG-TVEQFWFAEN 906
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Match: UPI00106AA32D (ATP-dependent DNA helicase PIF1-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AA32D) HSP 1 Score: 61.2 bits (147), Expect = 9.190e-9 Identity = 30/93 (32.26%), Postives = 52/93 (55.91%), Query Frame = 3
Query: 39 FADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVRGQENVSADRFRSLQAKLYLSRAALVMVNSNVWTAGGVANGAQGDLVHMHWSVED 317
F+DAI L+ + + N+++L ++G + I A+H+ RG ++D L+A L+LS A VM+ N+W G+ NG+ G + W E+
Sbjct: 124 FSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTRAEVMLTCNLWAEVGLCNGSFG-TIEQFWFAEN 215 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95691.17590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig95691.17590.1 >prot_S-dermatodea_contig95691.17590.1 ID=prot_S-dermatodea_contig95691.17590.1|Name=mRNA_S-dermatodea_contig95691.17590.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=105bp MRCELDDAEVATFADAIHLFPTNRQADDQNWDRLTQLGNLIALINAQHTVback to top mRNA from alignment at S-dermatodea_contig95691:47..363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig95691.17590.1 ID=mRNA_S-dermatodea_contig95691.17590.1|Name=mRNA_S-dermatodea_contig95691.17590.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=317bp|location=Sequence derived from alignment at S-dermatodea_contig95691:47..363+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig95691:47..363+ >mRNA_S-dermatodea_contig95691.17590.1 ID=mRNA_S-dermatodea_contig95691.17590.1|Name=mRNA_S-dermatodea_contig95691.17590.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at S-dermatodea_contig95691:47..363+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |