mRNA_S-dermatodea_contig9530.17554.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9530.17554.1
Unique NamemRNA_S-dermatodea_contig9530.17554.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A6H5K346_9PHAE (GB1/RHD3-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K346_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 2.070e-116
Identity = 185/219 (84.47%), Postives = 198/219 (90.41%), Query Frame = 1 
Query:   79 APRENCPLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNA-KASGRRGEEVDEEE---SKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAGD 723
            A RE+CPLQLVSTG+AE+DYSF LCE+NLDRVLSKVP+GMEVSVVSVVGAFRTGKSFLLSFFLR+LNSGS++D S+AWMTADG SLREGNRN+ K  G   + V EEE   S LRSFEWRGGVERMTTGIW+WSEPFVRR EGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKE  +AT  D
Sbjct:   13 AERESCPLQLVSTGDAENDYSFKLCEENLDRVLSKVPDGMEVSVVSVVGAFRTGKSFLLSFFLRYLNSGSEDDTSEAWMTADGPSLREGNRNSVKPVGGGAQGVQEEEGEGSSLRSFEWRGGVERMTTGIWIWSEPFVRRMEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEYALATGAD 231
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A836CGS0_9STRA (Anti-viral guanylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS0_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.170e-79
Identity = 142/216 (65.74%), Postives = 166/216 (76.85%), Query Frame = 1 
Query:   79 APRENCPLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDE--DLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAG 720
            AP    PL++V TG+A+D+YSFTL E+NL  +LS+VP+GM+VSVVSVVGAFRTGKSFLLSFFLR+L++ ++   D  D W+  DG +LREGN N       G   D       SFEWRGG  RMTTGIW+WSEPF RR  GG+ VAVL+VDTQGMFDNETSMGLTA IF +STL+SS QIYNVEKRIQEDHLQQLALFSEYGRMAL  +Q+ A  G
Sbjct:    2 APDRAKPLRIVRTGDAQDNYSFTLEEENLALILSQVPDGMKVSVVSVVGAFRTGKSFLLSFFLRYLHADAETPADTLD-WIKRDGEALREGNANLGVGQVTGGLQDPAGDSPLSFEWRGGQTRMTTGIWMWSEPFFRRAIGGETVAVLLVDTQGMFDNETSMGLTASIFGLSTLISSHQIYNVEKRIQEDHLQQLALFSEYGRMALAHKQDGADGG 216
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A4D9DBZ0_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBZ0_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.330e-70
Identity = 130/206 (63.11%), Postives = 157/206 (76.21%), Query Frame = 1 
Query:   76 PAPRENCPLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKA-SGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMAL 690
            P+PR   PLQ++  G AE+++SF L + NLD ++++VP  M+V+VVSVVGAFRTGKSFLL+F LR+L  GS+ D S+ WMTA G  LREGN N K  +G  G    E      SF+WR G ER TTGIW+WSE FVRR   G+EVAVL++DTQGMFDNETSM LTACIF +STLLSS QIYNV+ RIQED+LQ LALFSEYGR+AL
Sbjct:   19 PSPR---PLQIIRLGTAEENFSFHLEQANLDSIMAQVPSDMKVAVVSVVGAFRTGKSFLLTFLLRYLRYGSELDDSEDWMTAAG-DLREGNINEKVLAGDDGRNALES-----SFQWRAGKERTTTGIWMWSEAFVRRVANGEEVAVLLMDTQGMFDNETSMNLTACIFGLSTLLSSYQIYNVQNRIQEDNLQHLALFSEYGRIAL 215
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A7S2NXQ9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXQ9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.880e-67
Identity = 119/209 (56.94%), Postives = 154/209 (73.68%), Query Frame = 1 
Query:   97 PLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAGD 723
            P+Q+VS GN ED Y+FT  +D L+ +L+KVPE   V+VVSVVGAFRTGKSFLLS+FL++L+S ++ D +  W T          +  K  G  G   D+ +++   F+WRGG ER TTGIW+WSEPF R    G +++VL+VDTQGMFD+ET+M LTA IF +STLLSS QIYNV+KRIQED+LQQLALFSEYGRMAL +E+  ++A D
Sbjct:   61 PVQIVSIGNEEDAYAFTFHKDALNEILNKVPEKEHVAVVSVVGAFRTGKSFLLSWFLKYLHSDANGDAAKDWYT----------KFDKLGGGPGSNPDDTDAETHGFDWRGGSERNTTGIWMWSEPFSRTRADGSKISVLLVDTQGMFDHETTMALTAAIFGLSTLLSSHQIYNVDKRIQEDNLQQLALFSEYGRMALEQEKRESSADD 259
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A7S2D4G1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4G1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.020e-65
Identity = 116/202 (57.43%), Postives = 151/202 (74.75%), Query Frame = 1 
Query:  100 LQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQE 705
            L+   T   E  YSF LC DNLD +L+KVP  M+VSV SVVG FRTGKSFLL+F LRFL +   E   ++W TA+G ++ EGN NA ++  +   V+   +    F+WRGG ERMTTGIW++S PF +    G+++AVL+VDTQG+FDNET+M LT+CIF +STL+SS QIYNV++RI ED+LQQLALFSEYGRMAL++E+E
Sbjct:    3 LKETVTEEGEKSYSFDLCGDNLDSILAKVPADMKVSVCSVVGNFRTGKSFLLTFMLRFLRNRGCE--GNSWQTAEGDNISEGNNNAASTAAK--TVESNGADCHGFDWRGGHERMTTGIWMYSRPFFQDVFNGEKIAVLIVDTQGLFDNETTMLLTSCIFGLSTLMSSYQIYNVKERIAEDNLQQLALFSEYGRMALSQEEE 200
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: K0TPQ6_THAOC (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPQ6_THAOC)

HSP 1 Score: 220 bits (561), Expect = 9.530e-63
Identity = 117/207 (56.52%), Postives = 154/207 (74.40%), Query Frame = 1 
Query:  103 QLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAGD 723
            Q+VS GN+E++Y+FT  ED L+ +LSKVP G +V VVSVVGAFRTGKSFLLS+FLR+L +       D    +DG+       + K   +R + +++ E    SF+WRGG ER TTGIW+WS+P+  + +GG++VAVL+VDTQGMFD+ET++GLTA IF +STLLSS QIYNV+KRIQED+LQQLALF+EYGRMA   E++ A   D
Sbjct:  466 QIVSIGNSENEYAFTFHEDELNGILSKVPAGWKVCVVSVVGAFRTGKSFLLSWFLRYLEANCTMRAKDDTAGSDGS-------DGKPWHQRVQTLNQHEG---SFDWRGGKERNTTGIWMWSDPYYLKRDGGEDVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFTEYGRMAFENEEKAAATKD 662
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: B8C0C1_THAPS (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0C1_THAPS)

HSP 1 Score: 215 bits (547), Expect = 2.800e-62
Identity = 119/207 (57.49%), Postives = 150/207 (72.46%), Query Frame = 1 
Query:  103 QLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEP-FVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAG 720
            Q+VS G A D Y+FT  E+ L+ +L+KVP G +VSVVSVVGAFRTGKSFLLS+FLR+L         +   T  GA     +   K    R + +++ E    SF+WRGG ER TTG+W+WS+P F+ R+E G+EVAVL+VDTQGMFD+ET++GLTA IF +STLLSS QIYNV+KRIQED+LQQLALFSEYGRMA   E++ A  G
Sbjct:   90 QIVSIGTATDSYAFTFHEEELNTILAKVPPGWKVSVVSVVGAFRTGKSFLLSWFLRYL---------EGHCTRRGAGAANKDEGGKKWYERVQTLNQHEG---SFDWRGGTERNTTGMWMWSDPYFLPRSENGEEVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFSEYGRMAFEAEEKAAAMG 284
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A7R9YAI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI8_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.110e-60
Identity = 115/207 (55.56%), Postives = 148/207 (71.50%), Query Frame = 1 
Query:   97 PLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSD--EDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRT--EGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQE 705
            PLQ++ T    ++ SF   E+NL +VL ++ + M+V+VVSVVG+FRTGKSFLLSFFLR+L        D S  WM   G  L+EGN N   SG     VD        F+WRGG ER TTGIW+WS+PF R++  EGG ++AVL+VDTQGMFDNET+M LT+CIF +STL+SS QIYNVEKRI ED+LQ LA+FSEYGR+ ++ E++
Sbjct:    9 PLQIIRT---TEENSFAFEEENLAQVLDQISDDMKVAVVSVVGSFRTGKSFLLSFFLRYLEYSKQFPNDTSMDWMQFRGERLQEGNSN---SGVDSPTVDF------GFKWRGGTERQTTGIWMWSKPFFRQSAIEGGAKIAVLLVDTQGMFDNETTMALTSCIFGISTLISSHQIYNVEKRISEDNLQHLAMFSEYGRVGVSSEED 203
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BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A7S1Z6N7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z6N7_TRICV)

HSP 1 Score: 197 bits (501), Expect = 1.180e-59
Identity = 120/206 (58.25%), Postives = 143/206 (69.42%), Query Frame = 1 
Query:  100 LQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEE---VDEEESKLRS-FEWRGGVERMTTGIWVWSEP-FVRR----TEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMAL 690
            +Q+VS GN  D Y+FT  E+ L+ VL KVP G +VSVVSVVGAFRTGKSFLLS+FLR+L+  SD   S   + AD              G+ GEE    D   +     F+WRGG ER TTGIW+WS P F+RR    T   + VAV++VDTQGMFD+ET+M LTA IF +STLLSS QIYNV+KRIQED+LQQLALFSEYGRMAL
Sbjct:   46 VQIVSVGNESDAYAFTFHEERLNSVLQKVPPGWKVSVVSVVGAFRTGKSFLLSWFLRYLSYHSD---SRGKVGAD-------------KGKDGEEKKWYDHFHTLGNDGFDWRGGAERNTTGIWIWSHPSFLRRSNPQTGEDENVAVVLVDTQGMFDHETTMALTASIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFSEYGRMAL 235
[Close]
BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Match: A0A7S3ZYD4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYD4_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.340e-59
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 1 
Query:   97 PLQLVSTGNAEDDYSFTLCEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDLSDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTTGIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQE 705
            PL L+  G+A DDY+F L E  LD VL KVP G +V+VVSVVGAFRTGKSFLL+  LR+L      D    W+   G +L EGN N   +           S+  +FEWRGG  RMTTGI VWSEPF   +  G+ ++V+++DTQG+FDNET MGLT+CIF +STL+SS Q+YNV  RIQED+LQQLALF+EYGRMAL+ +++
Sbjct:   14 PLTLIRCGDATDDYAFVLDEACLDEVLKKVPSGRKVAVVSVVGAFRTGKSFLLTLVLRYLREKGGRD----WLEK-GGTLSEGNANEGVN-----------SQKDAFEWRGGRNRMTTGITVWSEPFEVTSNKGELLSVIILDTQGLFDNETPMGLTSCIFGLSTLMSSFQVYNVANRIQEDNLQQLALFTEYGRMALDAQRQ 200
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9530.17554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K346_9PHAE2.070e-11684.47GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
A0A836CGS0_9STRA2.170e-7965.74Anti-viral guanylate-binding protein n=1 Tax=Tribo... [more]
A0A4D9DBZ0_9STRA1.330e-7063.11GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
A0A7S2NXQ9_9STRA1.880e-6756.94Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2D4G1_9STRA1.020e-6557.43Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
K0TPQ6_THAOC9.530e-6356.52GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
B8C0C1_THAPS2.800e-6257.49GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
A0A7R9YAI8_9STRA9.110e-6055.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1Z6N7_TRICV1.180e-5958.25Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3ZYD4_9STRA4.340e-5955.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9530contigS-dermatodea_contig9530:1137..6186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.5
Seed ortholog evalue5.1e-96
Seed eggNOG ortholog2880.D7FX45
KEGG koko:K17339
EggNOG free text desc.GTPase activity
EggNOG OGsKOG2037@1,KOG2037@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size728
Cds size726
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9530.17554.1prot_S-dermatodea_contig9530.17554.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9530 1137..6184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925414.6561792-CDS-S-dermatodea_contig9530:1136..11721622925414.6561792-CDS-S-dermatodea_contig9530:1136..1172Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 1137..1172 +
1694079917.875342-CDS-S-dermatodea_contig9530:1136..11721694079917.875342-CDS-S-dermatodea_contig9530:1136..1172Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 1137..1172 +
1622925414.6701043-CDS-S-dermatodea_contig9530:3261..34081622925414.6701043-CDS-S-dermatodea_contig9530:3261..3408Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 3262..3408 +
1694079917.8880522-CDS-S-dermatodea_contig9530:3261..34081694079917.8880522-CDS-S-dermatodea_contig9530:3261..3408Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 3262..3408 +
1622925414.679962-CDS-S-dermatodea_contig9530:4289..43901622925414.679962-CDS-S-dermatodea_contig9530:4289..4390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 4290..4390 +
1694079917.8984158-CDS-S-dermatodea_contig9530:4289..43901694079917.8984158-CDS-S-dermatodea_contig9530:4289..4390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 4290..4390 +
1622925414.689768-CDS-S-dermatodea_contig9530:4989..52991622925414.689768-CDS-S-dermatodea_contig9530:4989..5299Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 4990..5299 +
1694079917.9111993-CDS-S-dermatodea_contig9530:4989..52991694079917.9111993-CDS-S-dermatodea_contig9530:4989..5299Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 4990..5299 +
1622925414.7101932-CDS-S-dermatodea_contig9530:6052..61841622925414.7101932-CDS-S-dermatodea_contig9530:6052..6184Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 6053..6184 +
1694079917.9235668-CDS-S-dermatodea_contig9530:6052..61841694079917.9235668-CDS-S-dermatodea_contig9530:6052..6184Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9530 6053..6184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9530.17554.1

>prot_S-dermatodea_contig9530.17554.1 ID=prot_S-dermatodea_contig9530.17554.1|Name=mRNA_S-dermatodea_contig9530.17554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
RTACSPAKPATMVASASSGAAPGAGPAPRENCPLQLVSTGNAEDDYSFTL
CEDNLDRVLSKVPEGMEVSVVSVVGAFRTGKSFLLSFFLRFLNSGSDEDL
SDAWMTADGASLREGNRNAKASGRRGEEVDEEESKLRSFEWRGGVERMTT
GIWVWSEPFVRRTEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLS
SCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEQEIATAGDE
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mRNA from alignment at S-dermatodea_contig9530:1137..6186+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9530.17554.1 ID=mRNA_S-dermatodea_contig9530.17554.1|Name=mRNA_S-dermatodea_contig9530.17554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5050bp|location=Sequence derived from alignment at S-dermatodea_contig9530:1137..6186+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGTACAGCGTGCAGTCCAGCTAAGCCGGCAACCATGGTGAGCCCAGCTGT
CAGCAGCAGGAGTGCCAGCATGAAGTCGTTACTTGGGGGGAATGGGGTGG
GGCGGGGTCCGGTGTGTGTGTTCCGAAAGACGAAAGAGTATTTATCAGAT
ATGTTATTCGAGATCGATGTCCATTGTAACACCTTCTCTTCGGGCAAACC
TCCACACAGACTCGCTGGTACGGGCCGCCCAGGTCGGAGAGCAGCAGCTA
ACAGCTTGTCCACGGTGCCTGCTCTTTGGCCAGCCTTGTCCGACCCTGTG
ACGCAATGCCGCCAATTGGTGTTGCGTCTTTTTGGGTCGGTTCGCTGCTG
CGGAAAATTGATACCATCAGTGTCGAACTCGTTATACCGTTCTGCTTCTC
TGCTGTATGCAACTTGCACTACTGTATACACAAATACATATATGTATACC
CACCCCTTGAATACTACTTGTAGAATACTGTTGTCTGTCGCGGATGGTTC
ATTTAGTTTGCTCGCTCTCGCGCTCTTACTGATCAACGGCTCGCTCTCGA
GCAAAGGTCGGGGTGGCATTCCTATCCGCATTCCCACATTGCCGCGGCTT
AACGAAGCATTGCCGATCAGGCCATATGGGTGTCTATTTGTTCCATGTCG
TATTTTCACTGCTGTGTACTTGTGTACCGAGGTATTATAGGCAGATCCAG
ATCATCACATCATACAATATGGCATCGGCTGACCGGACGGAGCCCATGTC
TCTGTACTCTGTACTCGTAGCTGTACAAGTAATTCCCTCGCTTTCGCGCT
TTTACTGAGCGAAGGCTCGCTCTCGAGCGAAGCTCGGGGTGGCATTCCTG
TGGGCATTCCCACCATGTCGCGGCTCAATGAGGCATGGCCGACCTGGCTA
CCCCGGGTGTCTCCTTGGATGATGTCGTATTTTTACTACAGAAGTACAAG
GCATCTCATGCAATACAACATGCATCTGACATCGGCTGACATGGAGCCCA
TGTATCTCCAGCTGTCCGTACGTATTACCAGCAGTATACGAGGTATACAG
ACAGTATATGTCGATGCTCTGGCGTCTCGTCTGTTACACCCCACTGAACT
ATTCCCCGCGCGTTCCTCTCATGTATGTGGTGGCGAGCATCACGCCGTGG
CGTAGAGTACAGGCGGCCGGCGTTTGCAGGCACGCCCACTCCAACAGAGC
CCGTGCTGTATGATAGCACCAAAAACCGCGCAGTCCTCGCCCGCTTTTTT
TGCGTGCCTATGTGGGCTGTAGACTGAATGATAGAAAAAAACATTTCCGG
AAGAAAGCAGATGGTGTGATTTACATTATGATCCGTTGCGTATTCGTGAC
CTGTTGCGTGTGTGATGCCACTTGCGTCGCTCGAATGACACAGGCAAGAG
GGCCCTGTGGCAAGCCCGCTCGTGGTACTATGAGGTTGGCTGTGTTTTTT
TTCTGGGCCGTCCCTCTGCCGCAGTGTCCTGCACGATTTATACACGGTAT
GATGCAAGTATCCTATTCGGGTTTACGGTATGTAATTTAGTGCACGGGCA
GAACAAGCCTGCGACTATTATATACCTTCCGGTATGCAATACAGCCACCG
GAGACGATTACAAAGAGACAAAAGTCCGAAAGAAAACGCAATATTTGGTT
GGGCCCCCATCGCGCCACCGAGCCCCACCATGAATAGTTTACAGTGTGTA
CAGAGGGTGTTCGAGCAGCCCTAGTCGTGTGGATGCCCTTGTAGCTTTAC
CGCTATCACGGTAGAGTATGTCGAGAACTGGGATGAGACAGAAGTACCGT
GCGCACGCACGATCGGTCGAAACGTGGGCTACTACAGCAGGCTACTGTCT
CCCACCACAGGAGTTCACCGGTCTATTGGTATGCTTAATCAGTCTTGTTC
GCTTCGCATGTCTTGATAAACCTCACTCAGGGAAGTCAGGGAGCTACTTG
TAGTTTTTTTTTCTGTTCCTGCAAACGCCTCTCCCGAGAGCCTCCAACCC
CCACTCCCCAACAGGCCCTGTGTCCATCTACACATCACTATATACCATAT
CGCCGCTTGCTTTGTCGGGGTAACGCCCAACGCCTGAACCGTGTGCTGCT
GCGACCTACTTTTATTGAACGACAGGTGGCTTCAGCATCAAGCGGTGCGG
CGCCGGGGGCGGGACCGGCTCCACGAGAAAACTGTCCCTTGCAGCTCGTC
AGCACGGGCAACGCCGAGGACGACTACTCCTTCACTCTGTGCGAAGACAA
CCTCGACCGCGTGCTGTCCAAGGCGAGCGCGCTGTTTTACCTACTTGTCG
TGAAAAACTCAGCTCCCTCGCCGTGCGGTGTCTAGCCCTTACTGTGGCGG
TAAAAAGTACAACCAACTGAGGCCATGGTTGGTCTGGCGCGATCCATACG
ACCGTCTTAGCGTTGTACGCGCGTGTAGTTGACACCTCCTTGTGTGTGCC
CGGGGCGGGTACTCGTGGACGGCTCTGACGCTGTCCCTCTCGGGAGGCGC
TCTTGCAGACCGAAGAGGCGCCCTTTGCCTAAGTCGCGCGAGCCTTCGAC
CTTTACAATCAGGCATAATGTTCATGGCGATGTCTCTGCTGTCATCGCCG
TTGGTGTTCTCCCTCCCTCTTTTGATTGCTATATCTCGTTGTCCTTCCTC
GAGCGGGTGTTTTCGATCTTCGTTTTTTTTTTTTTTCGGTATTTGTTCCT
GGTTATACCATATATACTCTGTAGCATGTGTTCCACTATATGGCTCCGTT
AGTATATCGTTTGTGGCTACGGCTGGTCATTGCAATGCGGGAATAACAAC
ATCAAGGTTGTGCACCGGTGTTTTTCGATACAGGACGAGGCAGAACAGTC
ATCGCAATTTTTCGCACGCAAAATAGTAGAACCGAGCGATGCGTCGTAGG
GCGCGACAATCCCCCGAGTGCGGCGAGTAGCTTTAGAGCACTTGCTCACG
GGCCGGGCTGGTGGGTCTCTCTGTTCGTGTGACTGCTTTCTCCCGGCGGA
ACACTCGAAAAGCAGTCGCATTGCTCTCCGAACGGGGACTCTCGTCTCTG
GTTGGTTCTTGTTGCATAAGTTCACGCCACGACGCTGTAACTTATCTTTG
AGCGATTGGCGGGCGGTGCACGCGCGTGCACGCGGGGGGTCGGGTTTCCG
CAGGTTCCAGAAGGGATGGAGGTGTCCGTCGTGTCCGTCGTGGGCGCCTT
CCGCACCGGAAAATCGTTCCTCCTCAGCTTTTTCCTTCGGTTCCTGAACA
GCGGGTGAGCACTGCTCAGGTTTCCTGTGAGATGTATTTCGCCACTGTGT
TGTGTTAATTTAGATCGTCGGACTTTCACAGCTACGCGCAGGTATTTAGT
AGGTTTGGAGTGCGTTTAGGTGGAATCCAACCCAACGCCCGTACCGCAGC
GTGTGCGCACACTGCAGGAATTACTTCGCGGCCGATGCAGGCGTACACGG
CCGAGTGAATTTGTGCTTAAATATCGAACAAGATCATAACAATTCCACGC
TATCTTCGCGCGCGAGACTCAGGCAAAATTCGATCGCCTTCGTAACCATC
GTGCACCATATCACCATCAACCACGGGAGAATGGTGTCCCACGGCTGCGC
GCATTATACGTGCGACGGGTTTCGCGCACCGGATCCCCCTTCCGAGAGCA
AAGCGCCCCCGGAGGGCTTAACCTTGATACTGCCCTTTCCCGCCCGCGGA
CAACAAGCACATAGAGAGCGCCACCAACTCGCGTTGTCTAGACACCATTC
ATGTTAGTGAGGCCGCGCGCGCAGCCGTCGCCGCCTGTCCCCCTCCCTCC
TTCACGCGCGCTAATTTCGCCGCTGCCCTCCCGCATTGGTCCTCTTCCCC
AAGGTCGGATGAAGACCTGTCGGATGCCTGGATGACAGCTGACGGGGCGA
GCCTGCGAGAGGGTAACCGTAACGCTAAGGCGTCCGGGCGGCGTGGGGAG
GAGGTGGACGAGGAGGAGTCGAAGCTGCGGAGCTTCGAATGGAGGGGCGG
GGTGGAGCGCATGACGACGGGGATCTGGGTGTGGTCGGAGCCTTTTGTGC
GGCGGACGGAAGGGGGCAAGGAGGTGGCCGTCCTGGTGGTGGACACCCAG
GGTATGTTCGACAATGAGACGTCCATGGGGCTAACGGCGTGCATCTTCGC
CGTCAGCACCTTGGTGAGAGGGCGGGGTTAGATTACGCGGGTGTTTGTTT
TGTGTGGTGTTGCGTTCGCGTCAAGAGGTGTTGGGGTGTCAGGTCTCCAG
GACGGGCCGTCGTTGTGGGGTCAATTTGTTGGGAGGGTTTATGTCGCCAG
CAAGAGAGCTTCCGCTTGGGTGAAGAGGCAGGCTTACGGGTGGAAGAAGG
GCAATGTTTTGTGACCGCTTCTACCGCCCTGTGCTATATGTGGTGTGCGT
CGGAGAAGGTGTGGTTGTGTCGATAGCGCCGGCTTTCGATGTCTGCTGGC
CTGATTATAAAGCTATGCTATTTACTAAACTAAACTAAAACCGAAGACCC
GACGTCGCGCTCTTGTGTTTTAGGAAAGTGAACAGAGAGATTTACGTAAT
CCGTTGGTCAGGATGATACCCAGGGGGCGTTCGTTGTACACAAAATTCCA
AGGACCATTTATTCATCAGCCCCCTCGCGACAAGAGCTCATTGGTATGAA
AAGAGCATGGCTAAACGACTCCCCATATATCGAAGCCTGGGTCAGCAGGG
CATCCACGAGGTCATTATATGAGCTTCAACTCTTCCTCCTATTTTACTTC
GTATTAAGACCACCTGGTTAGAACTACGCCACTCGGAAAACATCGCAGAA
CCCGGCCATCCGAAGGCTTAAAGCACATCACGCCCGCGGCCGCGCCGCCC
CCACCTCGCACACGCCTCCTAACCCACACCCCCCGGGACTCTCGGTCGTG
ACATTCTCGCGTGTAGCTGAGCTCGTGCCAGATCTACAACGTGGAGAAGC
GAATCCAGGAAGACCACCTCCAGCAGCTGGCCCTCTTCTCCGAGTACGGT
CGGATGGCGCTCAACAAGGAGCAGGAGATCGCCACCGCCGGCGACGAGGT
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Coding sequence (CDS) from alignment at S-dermatodea_contig9530:1137..6186+

>mRNA_S-dermatodea_contig9530.17554.1 ID=mRNA_S-dermatodea_contig9530.17554.1|Name=mRNA_S-dermatodea_contig9530.17554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at S-dermatodea_contig9530:1137..6186+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGTACAGCGTGCAGTCCAGCTAAGCCGGCAACCATGCGTACAGCGTGCAG
TCCAGCTAAGCCGGCAACCATGGTGGCTTCAGCATCAAGCGGTGCGGCGC
CGGGGGCGGGACCGGCTCCACGAGAAAACTGTCCCTTGCAGCTCGTCAGC
ACGGGCAACGCCGAGGACGACTACTCCTTCACTCTGTGCGAAGACAACCT
CGACCGCGTGCTGTCCAAGGTGGCTTCAGCATCAAGCGGTGCGGCGCCGG
GGGCGGGACCGGCTCCACGAGAAAACTGTCCCTTGCAGCTCGTCAGCACG
GGCAACGCCGAGGACGACTACTCCTTCACTCTGTGCGAAGACAACCTCGA
CCGCGTGCTGTCCAAGGTTCCAGAAGGGATGGAGGTGTCCGTCGTGTCCG
TCGTGGGCGCCTTCCGCACCGGAAAATCGTTCCTCCTCAGCTTTTTCCTT
CGGTTCCTGAACAGCGGGTTCCAGAAGGGATGGAGGTGTCCGTCGTGTCC
GTCGTGGGCGCCTTCCGCACCGGAAAATCGTTCCTCCTCAGCTTTTTCCT
TCGGTTCCTGAACAGCGGGTCGGATGAAGACCTGTCGGATGCCTGGATGA
CAGCTGACGGGGCGAGCCTGCGAGAGGGTAACCGTAACGCTAAGGCGTCC
GGGCGGCGTGGGGAGGAGGTGGACGAGGAGGAGTCGAAGCTGCGGAGCTT
CGAATGGAGGGGCGGGGTGGAGCGCATGACGACGGGGATCTGGGTGTGGT
CGGAGCCTTTTGTGCGGCGGACGGAAGGGGGCAAGGAGGTGGCCGTCCTG
GTGGTGGACACCCAGGGTATGTTCGACAATGAGACGTCCATGGGGCTAAC
GGCGTGCATCTTCGCCGTCAGCACCTTGGTCGGATGAAGACCTGTCGGAT
GCCTGGATGACAGCTGACGGGGCGAGCCTGCGAGAGGGTAACCGTAACGC
TAAGGCGTCCGGGCGGCGTGGGGAGGAGGTGGACGAGGAGGAGTCGAAGC
TGCGGAGCTTCGAATGGAGGGGCGGGGTGGAGCGCATGACGACGGGGATC
TGGGTGTGGTCGGAGCCTTTTGTGCGGCGGACGGAAGGGGGCAAGGAGGT
GGCCGTCCTGGTGGTGGACACCCAGGGTATGTTCGACAATGAGACGTCCA
TGGGGCTAACGGCGTGCATCTTCGCCGTCAGCACCTTGCTGAGCTCGTGC
CAGATCTACAACGTGGAGAAGCGAATCCAGGAAGACCACCTCCAGCAGCT
GGCCCTCTTCTCCGAGTACGGTCGGATGGCGCTCAACAAGGAGCAGGAGA
TCGCCACCGCCGGCGACGAGCTGAGCTCGTGCCAGATCTACAACGTGGAG
AAGCGAATCCAGGAAGACCACCTCCAGCAGCTGGCCCTCTTCTCCGAGTA
CGGTCGGATGGCGCTCAACAAGGAGCAGGAGATCGCCACCGCCGGCGACG
AG
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