mRNA_S-dermatodea_contig9489.17520.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9489.17520.1
Unique NamemRNA_S-dermatodea_contig9489.17520.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.010e-88
Identity = 135/219 (61.64%), Postives = 162/219 (73.97%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRITGY 659
            SN H+C+YRS +D+SVPL  +  F  LA VA  +R FF T KG++YLSGHGS ERMS+VPL D A+GV+ S+HCFE H EHLLP N ++C  L DRY  +SY  LMNSTFGLVPAGRSPG +RL EVMSAG+IPVF+G DLV PF+EL DW SFSF F PDQVGP M+R LRAVP   L +MQR SL+A+ KIFG     F   AR I+ E++QR  G+
Sbjct:    5 SNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSAR-IMLEILQRRLGH 222
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BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 5.000e-88
Identity = 134/216 (62.04%), Postives = 161/216 (74.54%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRI 650
            +N H+C+YRS YD+SVPL P  VF +LA V P +R FF T KGS+YLSGHGS ERMS+VPL D A+GV+ S+HCFE H EHLLP N ++C  L D+YD +SY  LMN+TFGLVPAGRSPG +RL EVMSAG+IPVF+G DLVPPF EL DW SFSF F PDQV   M+R LRAVP   L +MQR SLEAY +IFG     F   AR +++ L +R+
Sbjct:  210 TNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRL 425
[Close]
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.020e-87
Identity = 130/216 (60.19%), Postives = 158/216 (73.15%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRI 650
            +N H+C+YRS YD+SVPL P  V  +LA V+P +REFF T K ++Y+SGHGSEER+S++PL D  +GVV +MHCFE H EHLLP NA+FC  LKD+Y+GY Y  LMNSTFGLVPAGR P  +RL EVMSAG+IPVF+GRDLVPPF E  DW S SF F PD+V   M+  L AVPP  L EMQR SLEAY ++FG     F   AR I+  L +R+
Sbjct:   22 TNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRL 237
[Close]
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 3.310e-85
Identity = 130/216 (60.19%), Postives = 157/216 (72.69%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRI 650
            +N H+C+YRS YD+SVPL P  V  +LA VAP +REFF T K ++Y+SGHGSEER+S++PL D  HGVV +MHCFE H EHLLP NA+FC  LKD+Y+GY Y  LMNSTFGLVPAGR P  +RL EVMSAG IPVF+GRDLVPPF E  DW S SF F PD+V   M++ L AVP   L EMQR SLEAY K+FG     F   A+ I+  + +R+
Sbjct:  207 TNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRL 422
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BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 6.500e-85
Identity = 134/219 (61.19%), Postives = 159/219 (72.60%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRITGY 659
            SN  +C+YRS +D+SVPL     F  LA VA  +R FF T KGS+YLS HGS ERMS+VPL D A+GV+ S+HCFE H EHLLP N ++C  L DRY  +SY  LMNSTFGLVPAGRSPG FRL EVMSAG+IPVF+G DLV PF+EL DW SFSF F PDQVGP M+R LRAVP   L +MQR SL+A+ KIFG     F   AR I+ +++QR  G+
Sbjct:  114 SNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSAR-IMLKILQRRLGH 331
[Close]
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.360e-80
Identity = 127/216 (58.80%), Postives = 155/216 (71.76%), Query Frame = 3 
Query:   15 SCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRITGYY 662
            SCYYRS YD+S+PL P  VFP+ A     +R++F T KG++YL G+G EER +V  +HDPA+GVVS + C   HG+  LP N D+C + + RYD Y Y +LMN+TF LVPAGRSPG+FRL EVMSAGAIPVF+ RD + PF+E  DW SFSF F PD VGP M+  LRAV P  L EMQR SL AYWKIFGG T  +  IA N +D L+QRI GY+
Sbjct:  314 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVT-NYSVIASNAIDMLVQRI-GYH 527
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BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 3.370e-73
Identity = 120/220 (54.55%), Postives = 154/220 (70.00%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRITGYY 662
            SN  SC+YRS YD +VPL     F  L  +AP  R++F TVKG++YLSG G +ERMSVVPLH    GV+  ++CFE H EHLLP N +FC  L +    + Y  LMN+TFGLVPAGR P  +RLAEVMSAGAIPVF+ RD+V PF E  DW + SF FPP++VGP M+  LR+V P  L  MQR S++A+++IFG    G++ IAR +VDEL+ R+ GY+
Sbjct:  318 SNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEP-GYDRIARVVVDELVLRV-GYH 535
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BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.290e-69
Identity = 108/197 (54.82%), Postives = 135/197 (68.53%), Query Frame = 3 
Query:   15 SCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGF 605
            SCYYRS YD+S+PL P  VFP+ A     +R++F T KG++YL G+G EER +V   HDPA+GVVS + C   HG+ +LP N D+C + + RYD Y Y +LMN+TF LVPAGRSPG+FRL EVMSAGAIPVF+ RD + PF+E  DW SFSF F PD VGP M+  LRAV P  L EMQ + +     +   T C F
Sbjct:    9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQVDIVGVGLCVGDATFCSF 205
[Close]
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.850e-58
Identity = 101/177 (57.06%), Postives = 116/177 (65.54%), Query Frame = 3 
Query:   27 RSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSV--YLSGHGSEERMSVVPLHDPAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQ 551
            R+ YD+SVPL P  VF +LA VAP +R FF T   S+  YL  HGSEE M ++PL D  +GV  SMHCFE H +HLLP N +F     D Y G  Y  LMNSTFGLVPAG S G +RL EVMSAG+IPVF+GRDLVP F E  DW S SF F PD+V    +  L AVP E L  MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
[Close]
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.040e-43
Identity = 99/243 (40.74%), Postives = 129/243 (53.09%), Query Frame = 3 
Query:    3 SNTHSCYYRSDYDMSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHD--------PAHG------------------VVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGY-SYGRLMNSTFGLVPAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQVGPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELIQRI 650
            SN   CYYR  YD+++PL        L  VAP +R++FAT KG +YLSG+G  ER +V+ L          PA G                  V+    C   H E LL  N   C   +  YD   SYG LMN+TF L+PAGRSP  +RLAE +SAGA+PVFI +D V PF     W  FSF FPP++V P M++ LRAVP   L +MQ  +LE +   FG    G + +   ++D L  R+
Sbjct:  345 SNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQATALEVFDTYFGP---GMDNMLHTVLDILEDRL 583
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9489.17520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4H3_ECTSI2.010e-8861.64Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JGQ8_9PHAE5.000e-8862.04GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H7_ECTSI1.020e-8760.19Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE3.310e-8560.19GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI6.500e-8561.19Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5L9T2_9PHAE1.360e-8058.80GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JRU9_9PHAE3.370e-7354.55GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D8LQY4_ECTSI2.290e-6954.82Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI1.850e-5857.06Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI2.040e-4340.74Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9489contigS-dermatodea_contig9489:1496..7846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.6
Seed ortholog evalue1.3e-63
Seed eggNOG ortholog2880.D7G4H3
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size860
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9489.17520.1prot_S-dermatodea_contig9489.17520.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9489 1682..7805 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925411.8308918-UTR-S-dermatodea_contig9489:1495..16811622925411.8308918-UTR-S-dermatodea_contig9489:1495..1681Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9489 1496..1681 -
1694079915.9259787-UTR-S-dermatodea_contig9489:1495..16811694079915.9259787-UTR-S-dermatodea_contig9489:1495..1681Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9489 1496..1681 -
1622925411.891066-UTR-S-dermatodea_contig9489:7805..78461622925411.891066-UTR-S-dermatodea_contig9489:7805..7846Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9489 7806..7846 -
1694079915.981625-UTR-S-dermatodea_contig9489:7805..78461694079915.981625-UTR-S-dermatodea_contig9489:7805..7846Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9489 7806..7846 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925411.8427186-CDS-S-dermatodea_contig9489:1681..18041622925411.8427186-CDS-S-dermatodea_contig9489:1681..1804Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 1682..1804 -
1694079915.943044-CDS-S-dermatodea_contig9489:1681..18041694079915.943044-CDS-S-dermatodea_contig9489:1681..1804Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 1682..1804 -
1622925411.8561013-CDS-S-dermatodea_contig9489:3814..39851622925411.8561013-CDS-S-dermatodea_contig9489:3814..3985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 3815..3985 -
1694079915.953598-CDS-S-dermatodea_contig9489:3814..39851694079915.953598-CDS-S-dermatodea_contig9489:3814..3985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 3815..3985 -
1622925411.867087-CDS-S-dermatodea_contig9489:5899..61511622925411.867087-CDS-S-dermatodea_contig9489:5899..6151Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 5900..6151 -
1694079915.9634447-CDS-S-dermatodea_contig9489:5899..61511694079915.9634447-CDS-S-dermatodea_contig9489:5899..6151Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 5900..6151 -
1622925411.8782113-CDS-S-dermatodea_contig9489:7718..78051622925411.8782113-CDS-S-dermatodea_contig9489:7718..7805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 7719..7805 -
1694079915.9720867-CDS-S-dermatodea_contig9489:7718..78051694079915.9720867-CDS-S-dermatodea_contig9489:7718..7805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9489 7719..7805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9489.17520.1

>prot_S-dermatodea_contig9489.17520.1 ID=prot_S-dermatodea_contig9489.17520.1|Name=mRNA_S-dermatodea_contig9489.17520.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=211bp
MSVPLFPHMVFPELAGVAPDEREFFATVKGSVYLSGHGSEERMSVVPLHD
PAHGVVSSMHCFEAHGEHLLPNNADFCGQLKDRYDGYSYGRLMNSTFGLV
PAGRSPGAFRLAEVMSAGAIPVFIGRDLVPPFRELFDWGSFSFFFPPDQV
GPDMIRALRAVPPETLREMQRNSLEAYWKIFGGTTCGFETIARNIVDELI
QRITGYYHTI*
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mRNA from alignment at S-dermatodea_contig9489:1496..7846-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9489.17520.1 ID=mRNA_S-dermatodea_contig9489.17520.1|Name=mRNA_S-dermatodea_contig9489.17520.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6351bp|location=Sequence derived from alignment at S-dermatodea_contig9489:1496..7846- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGAGCAATACTCACAGCTGTTACTACAGATCCGACTACGATATGTCGGTG
CCCCTCTTCCCGCACATGGTGTTTCCCGAGCTCGCGGGCGTTGCCCCGGA
CGAGCGAGAATTCTTTGCTACCGTGAAGGTGCGTGAGTCGCTCTCGAGTC
GTTCAACGATGGTGCCCGGGGTGGTTTCGGTAGGCTTAGGAAACTCTCGA
TTACCGGGGACCATAGTTAACAGGTCCAAATTTGCCACAAGTCTCGACCT
AGTATACTGTAAAAAAATCAAAATAGGCTGGAAATATCGAGATTTCAAGG
TCGACGTGGCCATATCTCGTGTGTGTATTTGTGTTTCACGACTTTTTTTT
CGTTTGGGTACGTATGATATTCATCGTCGGAATGCAGTACCGTAGGTGGG
TAATCGTGCTCATGATATTTGGTCCTGATTAGTATGAAACCTCCGTAGTA
GGGACCTACTAGACCGGGAGTTATTTCGGTAGGCTGAGGAAGCTCTCTGG
GAGCTAGAACGGATGAAATATCGAAGCATCCCTTCCCTGGCGAAGCTAAT
GGCTCGAGCGCGCCCCCCTCTTACCCTTGGTGTATCGGTTGGCGTCGCGA
ACGCAAGGAAGAGCTGGTACAATATCATCCTTGTGAAAAGCAGCCTAGCC
TGGCCGGCGAAAACCCGGCATATCGCTCCGTCCCGGCATTGTTGGGACGC
GTGGTCTATGCCCGTCGGGGTTCGACATGATGCGTTAAACAGAAGTTCAT
AAGTACCCCCCCCTCTTGAGCCTGGTCCGACGAAAACACGGCATGCTCCG
TCCCGGCTTTGTAGGGATGCGAGGTCTATGGTCTTACGACTTCGGCATGC
ACGATCAATGAGTACACCCCCCCCCCCCTCTTACCCTGTGGTACCCAAAT
GCGTATCTTTGTTAGTTGATGCCGCTTTGCACACGTTTTATAATAGCGAT
TTAGAGTTGTATTTGATGCCGAATTTCCTATATGACGCCAAAATATCATA
GGGATTTTAGAGGTTTACCTCACAGAGTAGTAATTTTATGCCAACATAAA
CCTCACGGGCGTATGGTAGCCGTCTCTACAGTACCCACTATAGTATCAAA
ATTGGGCTCGGCAATAGAGGGGACGAGATATGAGCATCCACAAATGATAC
TTGTTCTAAAGAACCACTCCTTTTTTTTCCCTCCCCCCCTATCGATTGGC
CATCGGCGATAGATCGATCCTGTGGAAACAGTGCTCCGTCTTGTCAATGG
TCTAACAGCTAAGGCTGACTTAGCCCAGTGGTTTAAGATTTTCCACTTAA
TAATATCAACCAATACACGCTATGAAGTTAATAGTGTGGGCTATTTTTAC
AATTTTACTCCACGTAGAGACCATAATAATTTAACATGGAACCACTATAC
GCATTGAAGTTTATAATGCGGCCTCTACTGTTTTTCTGTACGCAGAGGCC
ATCGTCACTTAACATGGACCACTACACGCAATGGAGTTGATTAAGTGTGA
CCTCTCATTGCTGTACGTCAGAACCCATCGTCTCGGGGGCAGAAGATTCA
AACTCCTTTCGACGCCCCGCATCGCGCGCAAAATAGACGCACGATTCTCG
ACAACCTGATTTTAGAAGCAAGAACAAAAAAAGGACACCCGCTTACACCG
CTCCTGACGCTGCTACTGCTGCTGCTACCATCACTCGCCTCGCAGGGCAG
CGTCTACCTGAGCGGACATGGGTCGGAGGAGAGAATGTCAGTCGTTCCCC
TTCACGACCCGGCCCACGGTGTCGTGTCATCGATGCACTGCTTTGAAGCA
CACGGCGAGCACCTGCTGCCAAACAACGCCGATTTCTGCGGACAGCTGAA
GGATCGATACGACGGCTACAGCTACGGAAGGCTGATGAACTCGACGTTCG
GTCTGGTGCCTGCGGGAAGGTCTCCCGGGGCGTTTAGGCTGGCGGAGGTG
AGCACGCTCGGCGACCTGAACCCTTGTGGTGCTGGTATGATTACTGGATC
CGTTTGTTGGGATTAGGCCATCTACCCACACCGTGTTCGACATGGAACGG
GTACAGCAGTAACACCGTATTCGACATAGAAGAGGTACAGGAGAAGCACT
GTATTCGGCATAGAAGAGGCACAGCAGTTGCACCGTATTCGACATAGAAG
AGGTGCAGGAGTGACACCGTAATCGACATAAAAGAGGTGCAGGAGTGACA
CCGTAATCGACATAAAAGAGGTACAGCATTGACACCGTAATCGACATGAA
AGAGGTTAACAGTTATGACACCGTAGTCGCCTAAGCCTGGGGACGAAGCC
TGTTTTCGGGTAACTGTTGGCTACCATAATAGCAAACAGTTACCCGAAAA
CGTCCTTAGTCCCAAAACAAAAGGGTATATAGTAATAGCAAACAGTAACC
CGAAAGCAGCCTTGGGTTACGTTAAGCACTGAGTTGTGTTACCGTAACGT
GAAGCACTCAGTTATGTTACCGCAACGTTGAGCACTCAGTTGTGTTAATG
TAACGTGAATGACTCAGTTATGTTACCGTAACGGGAATCAGGCAGTAACG
TTACCGTAAGTTGGAGCACTCAGTTATGTTACCGTAATGTGAAGCACTCA
GTAACGTTACCGTAACGGGAATCAGTCAGTAACGTTACCGTAACGTGAAG
CACTCAGTTACGTTACCGTAATTTGAAGCATTCAGTTATGTTACCGTAAC
GGGATTCAGTCAGTAACGTTACCGTAAGTTGGAGCACTCAGTTACGTTAG
CCGTAGCGTTAAGCACTCAGCTAAGCTACCGCAAAGTAAAGCACGCAGTT
ATGTAACCGTAACATGAAGCACTCAGTTGCGTTACCGCATACTTCGAACG
GTGAGGACCCTCCTGGCGCGCGGGAGAATGTGCCATCGTATCATAGTGCC
AGAAGAAGGATTTGGCGACATACGACCCCGGCGTAATGTAGGAGTAGAAA
CATGCGAGCATGGATCCTGTTACGTGAAGCCCTCAGTTACGTACCCGTAA
CGTGAAGCACTCAGTTATGTTACCGTAACGGGAATCAGTAAGTAACGTTA
CCTTAAGTTGGAGCACTCAGTTATGCTACCGTAATGTGAAGCACTCAGTT
ATGTTACCGTAACGTGAATCAGTCAGTAGCGTTACCATAACGTGAAGCAC
TCAAGTCATGTTACCGTAATGTGATTCACTCAGTTACGTTGCCGAAACGG
GAATCAGTCAGTAACGTTACCGTAAGTTGAAGGACTCAGTTACATTAGCC
GTAGCGTTAAGTACTCAGCTAAGCTACCGCAACGTAAAGCACCCAGTTAT
GCAACCGTAGCGTGAAGCACTCAGTTACGTTACCGCATACTTCGGAAGGT
GAGGACCCTCCTGGCGCGCGGGGGAACATGTCATCGTAGTGCCAGGAGAG
GGATAATTGAAACACACCACCCCGGTGTACTGTAGGAGTAAAACTCTGCG
AGCGTGGATCCTGTTACGTGAAGCACTCAGTAGCGTTACCGTAACGTGAA
GCACTCAGTCACGTTACCGTAACGTTAAGCACCTAGCTCAGTTATGTTAC
CGTCACGTGAAGCACTCAGCTACCTTACGGTCACATGAACCGCTCAGTAA
CGTTACCAGTGCGCTAAGCACTCAGCTAAGTTACCTCCTTACCGTTACCG
TATACCTCGAAACGTGACGATCTTCCTGGCGCGCGGAGGGATACACCATC
GAAGCGCTAAGACGGGATTCTTTTTTTTTTAACACATGCCAACCCGGGGT
ACGGTAGCAGTATCAATGCTGCCATCATGAATCCTTACATTGCTTACAGG
TAATTTGCCCACCCTGCTAAAAAACCGTTTCCCTCCCGCTATCATCGAAC
GGGCGCCTCAGGTGATGAGTGCTGGAGCGATCCCCGTCTTCATCGGCCGC
GACCTGGTCCCGCCGTTTCGAGAGCTGTTTGACTGGGGCTCGTTTTCGTT
CTTCTTCCCGCCTGACCAGGTCGGGCCTGATATGATCAGGGCTCTCAGAG
CCGTCCCGCCCGAGACTCTCCGAGAAATGCAGGTAGGTCAGCGGCGTCGG
CGGCAAGGACGCAACTGCATGATGCCTCAAATGTAGTGCCGGGCTGCTGC
CTCGTACGCCTTGGTTCGTGTGATGGGAGAAGGAAGGTGCTCGTATCTTC
GCTCCAAACGTCAGTATAGGCCTCCTGGTGTGGTGTTCGGTCTTGTTTGA
GTCCGTGGAGATCTCATGTCGATGTGCATGCGCATGTGCATGCGCATTGT
TTCCTCTCGGATGAAGAAGAGCGCTTGTAGCCCCGTGTCGCATTTAAACA
GCAGGGTAGTCTCGCTCTTTGTCACGCATGTATATGTATCACGCGCGGCT
AATGATAGGAGGATTATGCTTGGGGAACATTACGGCAGCACGTACGCAAC
AGCAGTTGTCAGGACCGAGTATATCCATAAATGTTCTGATGTAAAGGTTG
TAAAGGACCTCGAATAGACGATCTAATAGACGATCTAGTCCCCCCCCACC
TATAATAGTATCAGTTGCTCGGTTCACCTCGTCTATTATTAGGACTCTAA
GATCAAGTGAGTGATCTAGGAAAACAGAGAGAATAAAGTAGACCGTTACC
CAGTCTCCTTGGCACATTTTGCGTCGACGGCAGGCCTACAGCATGAATTC
TTGTGTCACAAATCACAACTGAAGAGTTGGCATTACGGAGGTAGACGGTG
ACCAGGACCTAATGCCTCGAAACGAATAGCACTATACGTTTTTCCCGACA
TAAGTATTATATTACGGAGGGAGGACCGTACTTAACAGGTCCACATTTTC
AGGGGTCCTCACAGTGCCTGTTGGGAGAAAAAATAATCTGACAGTGCCGT
GTACCAGTGCCGGCTGGAAATCTTACAGTGCCGAACCAGTGCCGGTTGAG
AAAAAACAATCTGACAGTGCCGTACAGTACCGAAAACCGGCACTGGCGCT
GGTACTGTGAAAAGGCATGTGTAATTGCCGGCACTGTGAGGGCCCCTGAA
ATTTTTAGCACAAAAGTCTCAACTTAACCCTTTTGGTACTATTAAATTAG
TATGAATAATTAATAGGGCTCTCCAAAACGACCAAAACCTCTCTTGACGC
CAGCCGACAGCTACAGCCCCGTTTCCGTTGCGCTCCGTTCTCTCTTTCTC
ATTCCGGCGTCATAACCCATGTAGTTCCCCAAGGCCCCGCTTCAAGCACG
CCTCATTACGTACTAACAGGCGCTCTAAACAGGGGGCTAGTACCTAAAGG
GTAAAAAAGAAAAAACATACTGGAGTTATCGAGATTTTCATGGTCGATTT
TGTTTGAATAACGCCATCAGACCTCGTGCTTTTTTTGTTCGTGTTATTTT
GTTGTTGTTGTTGTTTGGGTATTAATGGTCGGAATACTTGGGTAGTCATG
GTCGTGATGTTTGGTCCCGATTATAGTCTGTAACTCTCCGTAATATTAAT
AATATTAATACTGTAGGTAATGTTACATTGCAATATCTTCAATCTTGCGG
CCTGATCCGTCAACAGAAAAAACTGTATATATATATATATGGTACTGTTT
TACTTAGGTGTTCGGGCCAATGTTTAAGAAACAAAACTCGAATACGGTAC
AAGAAATAAGCAGACGTTTGACCCTGATTAATATCATACTAATATCATAC
TAATATCATACTATTATAATATCACTGTGTACCTCCGCACTAGCGTCCGA
GTGCTGCGGTATTTACTACAGTGTTCCGAAGTGCTGCTAAGACCCAGTAT
TTACTACAGTGGTCCAACTGCAGAGCTGCTGCTACGTACCAAATATTAGG
CAACTCAGAGCTGTATCACCGCCGTCTGATGCCCGGAATACTAGGAGTGC
TACTCCTTTGGATCCAAACTACAGAATGCTGCGGCGTACCAAAGATTAGC
CAACTCAAAGCTGTATCACCGCTGCGCGAAGAGCTGTCAAATCAATGCGT
GAACGATACATCTGTTAACACTGTGCCCCCCGCCCCCCCCCGCCCCGCGC
CCAACAACCGTGTGCTGTTTTTGCCGGCCTTCGTCTGAGCAGCGGAATTC
GCTCGAGGCGTACTGGAAAATCTTCGGCGGCACGACGTGCGGCTTCGAAA
CGATTGCCCGCAACATCGTTGATGAGCTCATTCAAAGAATAACCGGATAC
TATCACACAATATAACCCTCCTGTCCTATTAATATTGATACAGTACTTCG
AAGTATCTCATTTCGCCTCGGGTGTTCTGGAATGGAATCTAAGATAGTAA
ATACCTTCGTCATCCTCTCCGCCCCCACGAATTGGTTTGACACATGGCTA
TTAACAATTGTTCTGGTGGTTGTGTAAAAGTTGTTTTACCGTTCGAAGGG
G
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Coding sequence (CDS) from alignment at S-dermatodea_contig9489:1496..7846-

>mRNA_S-dermatodea_contig9489.17520.1 ID=mRNA_S-dermatodea_contig9489.17520.1|Name=mRNA_S-dermatodea_contig9489.17520.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at S-dermatodea_contig9489:1496..7846- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGGTGCCCCTCTTCCCGCACATGGTGTTTCCCGAGCTCGCGGGCGT
TGCCCCGGACGAGCGAGAATTCTTTGCTACCGTGAAGATGTCGGTGCCCC
TCTTCCCGCACATGGTGTTTCCCGAGCTCGCGGGCGTTGCCCCGGACGAG
CGAGAATTCTTTGCTACCGTGAAGGGCAGCGTCTACCTGAGCGGACATGG
GTCGGAGGAGAGAATGTCAGTCGTTCCCCTTCACGACCCGGCCCACGGTG
TCGTGTCATCGATGCACTGCTTTGAAGCACACGGCGAGCACCTGCTGCCA
AACAACGCCGATTTCTGCGGACAGCTGAAGGATCGATACGACGGCTACAG
CTACGGAAGGCTGATGAACTCGACGTTCGGTCTGGTGCCTGCGGGAAGGT
CTCCCGGGGCGTTTAGGCTGGCGGAGGGCAGCGTCTACCTGAGCGGACAT
GGGTCGGAGGAGAGAATGTCAGTCGTTCCCCTTCACGACCCGGCCCACGG
TGTCGTGTCATCGATGCACTGCTTTGAAGCACACGGCGAGCACCTGCTGC
CAAACAACGCCGATTTCTGCGGACAGCTGAAGGATCGATACGACGGCTAC
AGCTACGGAAGGCTGATGAACTCGACGTTCGGTCTGGTGCCTGCGGGAAG
GTCTCCCGGGGCGTTTAGGCTGGCGGAGGTGATGAGTGCTGGAGCGATCC
CCGTCTTCATCGGCCGCGACCTGGTCCCGCCGTTTCGAGAGCTGTTTGAC
TGGGGCTCGTTTTCGTTCTTCTTCCCGCCTGACCAGGTCGGGCCTGATAT
GATCAGGGCTCTCAGAGCCGTCCCGCCCGAGACTCTCCGAGAAATGCAGG
TGATGAGTGCTGGAGCGATCCCCGTCTTCATCGGCCGCGACCTGGTCCCG
CCGTTTCGAGAGCTGTTTGACTGGGGCTCGTTTTCGTTCTTCTTCCCGCC
TGACCAGGTCGGGCCTGATATGATCAGGGCTCTCAGAGCCGTCCCGCCCG
AGACTCTCCGAGAAATGCAGCGGAATTCGCTCGAGGCGTACTGGAAAATC
TTCGGCGGCACGACGTGCGGCTTCGAAACGATTGCCCGCAACATCGTTGA
TGAGCTCATTCAAAGAATAACCGGATACTATCACACAATATAACGGAATT
CGCTCGAGGCGTACTGGAAAATCTTCGGCGGCACGACGTGCGGCTTCGAA
ACGATTGCCCGCAACATCGTTGATGAGCTCATTCAAAGAATAACCGGATA
CTATCACACAATATAA
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