mRNA_S-dermatodea_contig948.17513.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig948.17513.1 vs. uniprot
Match: D7FP75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP75_ECTSI) HSP 1 Score: 219 bits (557), Expect = 6.670e-58 Identity = 202/625 (32.32%), Postives = 281/625 (44.96%), Query Frame = 3
Query: 210 MKTPEETKRRQVLRGHEAYAKAERDLQKIRAS---RKYTTPTGGSSVAANGVQGGAARAAPMDDRGLRAARLTSVRSKRREQDKSREEADRVAQAMKDAPIKRKLERARRAAEELEAKERLALENTREMVRSSWQQREVPDVNPPDLTAGRVTEVDSN--EQDLESQQIEEAIMNSITDMEDGKGSTPSA-------VSSGGIVLDRPEKTTV--------------YWDPVLDGPIEDEKATESASRFSARGGEXXXXXXXXXXXAAPLAAENVEQGSADDSALRGYGGSSGSGRGGGRGQDWNTAMADALSVVEWDVTHEISSGSERESLRRTLLTLVKNALGGDDRRRRVRDNNAFFWENVGRWACGRCLMRLAGFVMERAPHGTATHSFAALADEDGGDDGGG----RADYVWVANAPNSIGQINMLQCLVATLEAHTTPGTTSSGDRDRRSPTSREPQLVVSIVPVYWV-------PGWKAQLEVDMAELVRGATDALAAGARVSPAGE-EHEFTRLRNQQDMEFQEALRQD------------------TAIVGKAAPVTTDSENPEDDIDGSQSVGGVKDEGEAGAA--------VPAPETTQERREKISASYARLGL 1892
MK P + KR+QV+RG A + ER+ ++ R + R YTTP G +V NG + A AAP+ + LR AR+ R+ + E+ +REEA+R A ++ VRSSWQQR + + N L + + + D ES+Q E A+ S+ D+E+G+G P A + + P T+ YWDPVLDGPI T++A AA AEN E W+ +A+ALSVVE+DV+ EI +G+ RE RRTL+ L++N L G++RRRRVR++N F EN+GRWACGR LMR+AGF MER + + +DGGD G R YVWVA S G++ M+Q LV LE GTT++ D PG A G+ AL R+SPA E + +F+R+R +QD F+EALR+D T VG+ +S+ P + +G + VGG + G G PA ETT++RR KI+ SYARLGL
Sbjct: 1 MKAPTQKKRQQVVRGLHAAERVEREREQERRAHRGRTYTTPRQGQAVVTNGARSAVA-AAPLTEDELRGARIRRDRTDKYERKLAREEAERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLKQTVRSSWQQRSLDNNNDKPLGGTDTDNANGDVADSDFESRQFEAAVRKSLADLENGEGGAPPAPPAALPRATPAYAIQTPPHVETLHGTPRAFGNREIAEYWDPVLDGPIP-AGLTDNAG------------------VAADAGAENRE---------------------------WDAVLAEALSVVEFDVSDEIPAGANREEFRRTLIVLLRNILAGNERRRRVRNDNVVFQENIGRWACGRQLMRMAGFTMERE----------SSSRDDGGDADWGVNEQRGSYVWVARERRSRGRLAMVQGLVEALEGQ---GTTATEDXXXXXXXXXXXXXXXXXXXXXXXXXSARQDPGEPLARTGWYAFAATGSRAALPPPLRLSPAVEADDDFSRVRREQDEAFEEALRRDREAPASRKTKAPAFGDDDTQHVGENDNRQEESQGPPPEAEGDEDVGGGRSLGGIGVGHGDGSTDPPPAEETTEQRRAKIALSYARLGL 565 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig948.17513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig948.17513.1 >prot_S-dermatodea_contig948.17513.1 ID=prot_S-dermatodea_contig948.17513.1|Name=mRNA_S-dermatodea_contig948.17513.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=562bp MKTPEETKRRQVLRGHEAYAKAERDLQKIRASRKYTTPTGGSSVAANGVQback to top mRNA from alignment at S-dermatodea_contig948:16104..23142- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig948.17513.1 ID=mRNA_S-dermatodea_contig948.17513.1|Name=mRNA_S-dermatodea_contig948.17513.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7039bp|location=Sequence derived from alignment at S-dermatodea_contig948:16104..23142- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig948:16104..23142- >mRNA_S-dermatodea_contig948.17513.1 ID=mRNA_S-dermatodea_contig948.17513.1|Name=mRNA_S-dermatodea_contig948.17513.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3372bp|location=Sequence derived from alignment at S-dermatodea_contig948:16104..23142- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |