mRNA_S-dermatodea_contig9443.17473.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig9443.17473.1
Unique Name	mRNA_S-dermatodea_contig9443.17473.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.880e-60
Identity = 125/230 (54.35%), Postives = 148/230 (64.35%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADS---DHDCEKPAESDASXXXXXXXXXXXEKGDGAGKP--KRVIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDKDSEL LA+RLCP +LEISAA KEKK  E P  + R+YK+AAR +REY+GVPSM+PPKL+ TLA LKL P RLV QGLAP+ LL R        AK S VPLG    G+ NEDL E+  + MELM++EDDKKEWNDGF  V     PAD+   D+D E                   EK D       K +IH  F+A GI++RPRE +PLL+AL V P R
Sbjct:   78 PDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGD---GKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSV----EPADTSSPDNDNE-------------------EKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCR 281

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.410e-59
Identity = 121/226 (53.54%), Postives = 146/226 (64.60%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKR-VIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDKDSELNLALRLCP +LEISAA KE K  + P  ++ +YK+AAR +REY+GVPSM+PPKL+ TLA LKL P RLV QGLAP+ LL R        AK S V LG    G+ NEDL E   + ME M+VEDDKKEWNDGF  V              +PAE+ +S           E  D A + K+ +IH  F+A GI++RPRE +PLL+AL V P R
Sbjct:   89 PDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGD---GKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSV--------------EPAETSSSDNGNEE-----ENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWR 292

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.720e-59
Identity = 120/226 (53.10%), Postives = 146/226 (64.60%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKR-VIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDK+SEL LALRLCP +LEISAA KE K    P  ++++YK+AAR +REY+GVPSM+PPKL+ TLA LKL P RLV QGLAP+ LL R        AK S VPLG    G+ NEDL E+  + MELM+VED KKEWNDGF  V              +PAE               EK D A + K+ +IH  F+A GI++RPRE +PLL+AL V P+R
Sbjct:   80 PDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGD---GKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSV--------------EPAE------ISFPANDNEEKNDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYR 282

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 9.500e-58
Identity = 120/227 (52.86%), Postives = 145/227 (63.88%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKP--KRVIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDKDSELNLA+RLCP +LEISAA KE K   KP  + R+YK+AAR +REY+GVPSM+P KL+ TLA L+L P RLV QGLAP+ LL R        AK S VPLG    G+ NEDL E+  + MELM+VEDDKKEWNDGF  V              +PA++ +            EK D       K +IH  F+A GI++RPRE +PLL+AL V P R
Sbjct:   62 PDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGD---GKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSV--------------EPADTSSPGNDNE------EKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCR 265

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.460e-57
Identity = 117/226 (51.77%), Postives = 144/226 (63.72%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKR-VIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDKDSEL LA+RLCP +LEISA +KE +  +KP  + R+YK+AAR +REY+GVPSM+ PKLI TLA LKL P RLV QGLAP+ LL R        AK S VPLG    G+ NEDL E+  + MELM+VEDDKKEWNDGF           ++ D    A    +           E  D A + K+ +IH  F+  GI++RPRE +PLL+AL V P R
Sbjct:   80 PDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGD---GKNNEDLAESVAAGMELMSVEDDKKEWNDGF---------VSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCR 293

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.830e-54
Identity = 118/226 (52.21%), Postives = 141/226 (62.39%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKR-VIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            PDGDDIVFDKDSELNLA+RLCP +LEISAA KE K   KP  + R+YK+AAR +REY+GVPSM+ PKLI TLA LKL P RLV QGLAP+ LL R         K S V LG    GE NEDL E+  + MELM+VEDDKKE N+GF           +  D    A    +           E  D A + K+ +IH  F+A GI++RPRE +PLL+AL V P R
Sbjct:   62 PDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGD---GENNEDLAESVAAGMELMSVEDDKKECNNGF---------VSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWR 275

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 2.050e-53
Identity = 114/222 (51.35%), Postives = 140/222 (63.06%), Query Frame = 1

Query:    1 PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMR-------TAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKR-VIHAVFLAAGIKIRPRETKPLLLALGV 642
            PDGDDIVFDKDSEL LA+RLCP +LEISAA+KE K   KP  + R+YK+AAR +REY+GVPSM+PPKLI TLA LKL P RLV QGLAP+ LL R        AK S VPLG    G+ NEDL ++  + MELM+VED KKEWNDGF           ++ D    A    +           E  D A + K+ +IH  F+A GI++RPRE   LLL + +
Sbjct:   77 PDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGD---GKNNEDLADSVAAGMELMSVED-KKEWNDGF---------VSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPREG--LLLGVSI 283

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.070e-18
Identity = 63/173 (36.42%), Postives = 85/173 (49.13%), Query Frame = 1

Query:  136 VYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMRTAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKRVIHAVFLAAGIKIRPRETKPLLLALGVHPHR 654
            +YK  AR +REYHGVPSM+   L  T+ LL+L P RLV QGLAP+KLL           G S      +  + +G+S  E+   + D  + +D            D++HD         +            K     + K  +HA  +AAGI +RPRET+PLL ALGV PHR
Sbjct:   26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLK----------GFSAADAHADTTDSSGSSGSEVEPEQADDNQVSDDXXXXXXXS--GDTEHD---------NIRKHNSLGFETNK-----RSKHPVHAALVAAGITLRPRETRPLLRALGVGPHR 172

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 5.480e-13
Identity = 61/164 (37.20%), Postives = 79/164 (48.17%), Query Frame = 1

Query:  136 VYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMRTAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKRVIHAVFLAAGIKIRPRETKPLL 627
            ++K AAR +REYHGVPS++P  L  T+ LL+L P RLVAQGLAP+ LL           G+S  G                  V+ D  + + GFE      N   S HD    + SD               G  A   K  I AVF+A G+++RPRET+PLL
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK----------GNSTAG------------------VDADSTDGSGGFEAEEEQANNQFS-HDLSSNS-SDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLL 174

[Close]

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.260e-12
Identity = 58/165 (35.15%), Postives = 78/165 (47.27%), Query Frame = 1

Query:  136 VYKVAARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLM-RTAKKSPVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPADSDHDCEKPAESDASXXXXXXXXXXXEKGDGAGKPKRVIHAVFLAAGIKIRPRETKPLL 627
            +YK AAR + EYHGVPSM+   L  T+ LL+L P RLVAQGLAP++LL  ++A                    E      +   V DD             +++  D +HD    A  D+                  G  K  IHAVF+AAG+++RPRET+PLL
Sbjct:   51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNT---------NSRDGTDIEHD--HVATQDSIDIE-------------TGASKHPIHAVFVAAGVQLRPRETRPLL 191

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9443.17473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
D8LN66_ECTSI	1.880e-60	54.35	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KAY7_9PHAE	6.410e-59	53.54	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JPU3_9PHAE	6.720e-59	53.10	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LN68_ECTSI	9.500e-58	52.86	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JQ17_9PHAE	2.460e-57	51.77	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KB69_9PHAE	1.830e-54	52.21	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LN82_ECTSI	2.050e-53	51.35	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KVV7_9PHAE	3.070e-18	36.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCG1_9PHAE	5.480e-13	37.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3J2_9PHAE	2.260e-12	35.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9443	contig	S-dermatodea_contig9443:1645..5817 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	655
Cds size	654
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925408.2847805-CDS-S-dermatodea_contig9443:1644..1749	1622925408.2847805-CDS-S-dermatodea_contig9443:1644..1749	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9443 1645..1749 +
1694079913.492693-CDS-S-dermatodea_contig9443:1644..1749	1694079913.492693-CDS-S-dermatodea_contig9443:1644..1749	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9443 1645..1749 +
1622925408.2949958-CDS-S-dermatodea_contig9443:5267..5816	1622925408.2949958-CDS-S-dermatodea_contig9443:5267..5816	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9443 5268..5816 +
1694079913.5020626-CDS-S-dermatodea_contig9443:5267..5816	1694079913.5020626-CDS-S-dermatodea_contig9443:5267..5816	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9443 5268..5816 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9443.17473.1	prot_S-dermatodea_contig9443.17473.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig9443 1645..5816 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig9443:1645..5817+
coding sequence from alignment at S-dermatodea_contig9443:1645..5817+

protein sequence of mRNA_S-dermatodea_contig9443.17473.1

>prot_S-dermatodea_contig9443.17473.1 ID=prot_S-dermatodea_contig9443.17473.1|Name=mRNA_S-dermatodea_contig9443.17473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=218bp
PDGDDIVFDKDSELNLALRLCPRTLEISAAVKEKKEPEKPVDDDRVYKVA
ARTMREYHGVPSMSPPKLINTLALLKLGPDRLVAQGLAPQKLLMRTAKKS
PVPLGSSIGGEKNEDLEETGTSDMELMTVEDDKKEWNDGFEPVGGAQNPA
DSDHDCEKPAESDASAAVSSSEDESEEKGDGAGKPKRVIHAVFLAAGIKI
RPRETKPLLLALGVHPHR

mRNA from alignment at S-dermatodea_contig9443:1645..5817+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig9443.17473.1 ID=mRNA_S-dermatodea_contig9443.17473.1|Name=mRNA_S-dermatodea_contig9443.17473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4173bp|location=Sequence derived from alignment at S-dermatodea_contig9443:1645..5817+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCTGATGGAGACGACATCGTGTTCGATAAGGACTCCGAGCTCAACCTGGC
GCTCAGGCTGTGCCCCAGGACGCTGGAGATCTCGGCCGCAGTCAAGGAGA
AGAAGGTCAGTGCTTGTTGTGCCTTGATTTTGGAGAGGTGCGTTTGGCCT
CCAGCTCGCGTTGGCTCTATTGTTGATTGACGGTTCCTACCGAGCATGCA
CAGCGCGGTTCATCTAGCGTGTGATAGCTCGTGCGCATTCCAGATGCCAA
GACGTCTTTCAGGCTCGAGCAAGGGCGCTCCGTACAGAGGCGATGTGGCC
GTGGGTCGAATCCCGCGGTAGCGGTGTACCTGCAATTCCTTCAATCGTGG
GTTCGACAGAGTATATACAGCAGTACTTCTGTACTTGTGTATGACTAATT
CTTCTCGAGAGGTCTGTGGTAGCTTGTATACAAGCAGTTTATACTGTATG
ACCGTCATTTACTTGTAGTACAAGTATACTGATTTTGTCGAGCGGGTGAC
CCGAGCGGCTCTTGCCCCTGGATGAACTGCTGGGAACTTGTCGCACAGGG
CGCGGTTCGAATAAGAGGGAATGTAGCCCGTACTTACACGTACACACTTA
CAACAACAACAGCAGTACCGTTCTAGATGTGCATCAAACTCGAGTGTGCT
CCTTCCACCACATAGTTCAAGTATGGGGTATTGGGTTTGTTGCATTACTG
CTGTCGAATGCGGGTGATTCTTGTCGGGTTGATTTATTTTTGAGATTTGA
CAACAAAATTTAGATGTCAGTACAACTTCTTGAGCTGTATACACTTAGTG
GTGTATACTGCTGTTGTGTTTTTTTTAGCAGGGATGTCCATAACCCGAAA
CCGGGGTAAAATCGGGGTTATTTTCTACTCCGGAGTATTTTGTATTTTAA
CCATAGATGCGGTATTTAAAAAGTCAACCCATATTAATTCATGAATATGG
CCTATTCTCGGTTTGCCATATTCATTCATCAAATATTCACTAAACGGGGA
TATTTCCTACCATCCCCGGGGGGGGGACAGATAAGAATCATCCCCTCCCA
CGCATACATGAAAAAAAGTGTGGAAACCCAGAAAAATTGAAGTTTGAATT
TTGAATTTTGCCAAGGCTTGTCACGAATCACGAGGGTCAAATGGAAAATT
TCCATACGGGGAAACCATGGAAAACCCATGGTTTACGGGGCACCCCAGCC
GTTTCGGGCCCCATTTCCAGCTCCATACCACCCCAGGACCAACAGCCAAG
CGAATCCCAGCCCTCTGTGCGGCGAGAAGCAGCTGCCCATCGTCGTCGAC
GTTGAGCACTCTCTCACACTGAAACTGGGTCATGTTGGTGGCGTGGTAAG
ACTGTGAGACAGAGAAACCTCACACACAAAAATCGTCATACCCCTTTGCA
AGCTTGTGCACTCTGGGGTTTCCACATTTTTTTCTGCGGCGTGTTTTGAA
TATTTTCTTATTCAGGGCAAAACCAATATTCATTCTGAATATGAATACTG
TATTGAATATTAATATTGAATATTGAATACCGCATGTGTCGAGCAAAAAA
ATAAGGGCAACCCTGCACCCTGCCCGATGACGATCTGATGAACTATGAGG
CCGACTCTTATCGCAACAGAAAACGAAAACGAAAATGGACGATTTTCGAT
ATTTGTTTTCGATCACAGAAAATCCAAAAATCGCTGTCTTATCGGCTCCG
TTTTGTGTTGTATTTGAACCACCAGCTGTACAGCTGTAAATGCCAACGTT
GTTTTTTCCTCTGTGCCAGACAGAGAGAGACCCCACAGAACAGCAGCCCC
TTGGCAGGGCGAGACAGAGCAAGCGGCCGCGGGCGACACGGCAACGCACC
ATGACTGGCGCGTCTTGTCCACGCCCGCGTTTCTCCAGCAGTGTGCTCTG
CTGCGTCGGCAGTGTTGTTTGCAGGATGCATGTACATACACGATGATACT
TTGTCGTTGTACACGCGTGTGAGATTGGGAGCGGAAAGAGACTGCTCAGC
TCCACACCTGCGTTCAGCAGTCTTTGCACACGAACAGCAGTCTTTGCACA
CGAACAGCAGTCTTTGCGCGGCAGGGGTGGCTTTGTCCAGGCGCCACGCC
CGTGCGCATATGCCGTCCGCAGCCTGGCACTGTCTGTGTGGGCCTGTCTG
ATGTCCTACCCGTGTTACAAGACCCCTACTATGATGTGAAAATACCCATA
CTATGACGACAAAAGCAGAGTCTCGCGCCCCAGATGGGTTTACGCCTTCG
ACTAACTTACTGCATCGAAAATGAATATCGAAAATCGTCCATTTTCGATA
TCGATTTCTGTTGCGGTAAGAGTCGGCCTGAAACCATGAAACACAAAACA
AGCGTGCTGTACTGCTGGACGCCCAATCGTCACACTTTTTTATGGACGCA
AAACAACCACATCTCTTTCTAAAAAATAAAGAAACCATAACTTTGCAAAC
GACTGGCAGTCACAACATAAAAAATATACATTTTGGGGTGGTGTACCCAA
ACTACTACAAGCAGCACGCAGCAAAGCGGAAAAAAATATTGGAAACCCCG
GGGATGGGGATTTTCATCCCCTGTTCTCAACGGTTATAACCGGTTTTGGG
GGAAAGCTAATTCCCGGTTATAGCCGGTAGGTTTGGGGTCAGTTTGGTGT
TGTGGACATGCATGATTTTTATGTGATACAAGGTAGTACCTGGTACTACT
GTACGTTAATAAGCACCTTGTAGTTTACTTTCATTGAGCGAGTGAGTAGT
GGTACTTATATTGCAGTACCTGTATATGACAGCGATTATGATAGACCTAC
AAGTACAGCAGTATATTTACAGCGATTATTATTCGAGCTTGCGCATGGAG
GCATGGCAGTTTTATGGAAAACAAAGCCTAAATACGTATTATACGTACAA
GGTACATAAACAGTGGTTCTATATACTTGTACAAACGATACTTGTACTTG
TACAGATTATGTGCATCCCTACTTGTACTTGTAACCCTCACAGGCGCAAG
TTTCTCTAAAATAGGCGCGCTCCCAAACGGTCGGTCTCTTAAATACTGCG
GTCCTGTTATCTTATGTACGTTCCTACAAACAATGTGTTAAGTATTAGGT
GATTTGTGGTGGCATACACCTCTTCCCCGTACTGTTGAAAACTAGCCTCA
TCTTTGTCCTGGATCTCAAGCTTTGACAGCGAATATTTCTCGGTACGGTA
CGATACTGGCATTGCTGAGTCTGAGCTCTGGCGGCGCGTTCAGGACCGTC
TAGGAGATGTACTTGCTTTTTGCATAGTACAATGTCACTACAGTACAGCG
TTGCAAGTGGCCTGCCAAAAACAAAGCAGCGGATTCGTTGAAAAAATCGA
ATCCCTTTCCTCCTGCTGAAGGGCTCATACAGCAAAAACATGTCTACACT
CTTGATTTATCGCTTTTTTGCCCTTCGCGTATCGTTAGGCTGCTGTCCTA
ACGTCACACCAAAACATTATCAATAAAAGAGAAGAAGTAGAATTTAATGT
ATCTGGTGCGCTCACCATTCCCAACGACCCAAACAATTACCCTGACCTAG
CCTGACATCCTCCCGTTTTCCACCCCCCCCTGCCCTCCCTCCCTTCCCTC
CCCACTCCCCACGCCACCCTCAGGAGCCCGAAAAGCCTGTCGATGACGAC
AGGGTCTACAAAGTCGCCGCCCGCACAATGCGCGAGTACCACGGTGTGCC
CTCCATGAGCCCGCCCAAGCTCATCAACACCCTGGCTCTCTTGAAGCTGG
GGCCCGACCGGCTCGTCGCCCAGGGCCTGGCTCCTCAGAAGCTCCTGATG
CGTACGGCGAAGAAGTCGCCGGTGCCCCTCGGTAGCAGCATCGGTGGCGA
GAAGAACGAGGACCTCGAGGAGACGGGTACCTCCGACATGGAACTGATGA
CCGTCGAGGACGACAAGAAGGAGTGGAACGATGGTTTCGAACCGGTCGGT
GGCGCTCAAAACCCCGCCGACAGCGACCACGACTGCGAAAAGCCCGCCGA
AAGCGACGCCTCCGCTGCGGTGTCTTCCTCCGAAGACGAGAGCGAAGAGA
AAGGCGACGGCGCTGGCAAGCCCAAGAGGGTCATCCACGCCGTCTTCCTC
GCCGCCGGCATCAAGATCCGCCCCCGCGAGACCAAGCCCCTGCTTCTCGC
GCTCGGCGTCCACCCCCACCGGC

Coding sequence (CDS) from alignment at S-dermatodea_contig9443:1645..5817+

>mRNA_S-dermatodea_contig9443.17473.1 ID=mRNA_S-dermatodea_contig9443.17473.1|Name=mRNA_S-dermatodea_contig9443.17473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at S-dermatodea_contig9443:1645..5817+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCTGATGGAGACGACATCGTGTTCGATAAGGACTCCGAGCTCAACCTGGC
GCTCAGGCTGTGCCCCAGGACGCTGGAGATCTCGGCCGCAGTCAAGGAGA
AGAAGCCTGATGGAGACGACATCGTGTTCGATAAGGACTCCGAGCTCAAC
CTGGCGCTCAGGCTGTGCCCCAGGACGCTGGAGATCTCGGCCGCAGTCAA
GGAGAAGAAGGAGCCCGAAAAGCCTGTCGATGACGACAGGGTCTACAAAG
TCGCCGCCCGCACAATGCGCGAGTACCACGGTGTGCCCTCCATGAGCCCG
CCCAAGCTCATCAACACCCTGGCTCTCTTGAAGCTGGGGCCCGACCGGCT
CGTCGCCCAGGGCCTGGCTCCTCAGAAGCTCCTGATGCGTACGGCGAAGA
AGTCGCCGGTGCCCCTCGGTAGCAGCATCGGTGGCGAGAAGAACGAGGAC
CTCGAGGAGACGGGTACCTCCGACATGGAACTGATGACCGTCGAGGACGA
CAAGAAGGAGTGGAACGATGGTTTCGAACCGGTCGGTGGCGCTCAAAACC
CCGCCGACAGCGACCACGACTGCGAAAAGCCCGCCGAAAGCGACGCCTCC
GCTGCGGTGTCTTCCTCCGAAGACGAGAGCGAAGAGAAAGGCGACGGCGC
TGGCAAGCCCAAGAGGGTCATCCACGCCGTCTTCCTCGCCGCCGGCATCA
AGATCCGCCCCCGCGAGACCAAGCCCCTGCTTCTCGCGCTCGGCGTCCAC
CCCCACCGGGAGCCCGAAAAGCCTGTCGATGACGACAGGGTCTACAAAGT
CGCCGCCCGCACAATGCGCGAGTACCACGGTGTGCCCTCCATGAGCCCGC
CCAAGCTCATCAACACCCTGGCTCTCTTGAAGCTGGGGCCCGACCGGCTC
GTCGCCCAGGGCCTGGCTCCTCAGAAGCTCCTGATGCGTACGGCGAAGAA
GTCGCCGGTGCCCCTCGGTAGCAGCATCGGTGGCGAGAAGAACGAGGACC
TCGAGGAGACGGGTACCTCCGACATGGAACTGATGACCGTCGAGGACGAC
AAGAAGGAGTGGAACGATGGTTTCGAACCGGTCGGTGGCGCTCAAAACCC
CGCCGACAGCGACCACGACTGCGAAAAGCCCGCCGAAAGCGACGCCTCCG
CTGCGGTGTCTTCCTCCGAAGACGAGAGCGAAGAGAAAGGCGACGGCGCT
GGCAAGCCCAAGAGGGTCATCCACGCCGTCTTCCTCGCCGCCGGCATCAA
GATCCGCCCCCGCGAGACCAAGCCCCTGCTTCTCGCGCTCGGCGTCCACC
CCCACCGG