mRNA_S-dermatodea_contig9435.17465.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A6H5JKX8_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX8_9PHAE) HSP 1 Score: 171 bits (433), Expect = 2.250e-50 Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 2
Query: 8 SSMAGLYRYVLCLVGLGLRSVEGFAVPTMALKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKV 358
S MAGL + LC++ LG +GF P+MALK PA P VVI PGFGNDARDYTNP+DGGE+ AFASALERRGL TFVV V RSDWL VA AVLT +FWKGTCRP+GPAYSWYLQKV
Sbjct: 6 SRMAGLLLW-LCVMALGCGGAQGFISPSMALKLPAKFP-VVILPGFGNDARDYTNPLDGGEDKAFASALERRGLKTFVVAVERSDWLKVASAVLTLDFWKGTCRPNGPAYSWYLQKV 120
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A0G4FYU4_VITBC (GPI inositol-deacylase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FYU4_VITBC) HSP 1 Score: 113 bits (282), Expect = 2.500e-27 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 2
Query: 86 PTMALKAPA-NCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKV 358
P++A P+ P+VI PGFGNDA DYTNP+ GE+ + +ALERRG + +VVP+AR +WL+VA LT FW G CRPDGP + WYL +V
Sbjct: 78 PSLAAAGPSLKQHPIVILPGFGNDALDYTNPMKMGEDTSLKAALERRGYNVYVVPIARREWLSVARDFLTRRFWTGECRPDGPGFRWYLDRV 169
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: W7T4S9_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4S9_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.740e-25 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 2
Query: 5 SSSMAGLYRYVLCLVGLGLRSVEGFAVPTMALKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKV 358
S+ +AG+ ++ C L + FA A P + PPVVICPGFGND DY NP++ GEE AL RRG +VVPV R+DWL A + TP FW T P ++ WYL KV
Sbjct: 7 SAVIAGVVFFLSCKHLLTSAWIGPFATAPSA-SLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKV 123
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A7S0GBY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GBY2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.360e-20 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 2
Query: 122 PVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDT---FVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKVS 361
P+VICPGFGNDA DY+ P+ EV F SALERRG D V+ + RSDW+ VAG + F++ P G Y WY++K++
Sbjct: 21 PIVICPGFGNDAIDYSEPLQQPREVGFVSALERRGCDPQSISVLDIKRSDWIRVAGGLFDVNFYRNCAEPTGGGYGWYVKKLT 103
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: K0SND7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SND7_THAOC) HSP 1 Score: 93.2 bits (230), Expect = 1.140e-19 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 2
Query: 95 ALKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDT---FVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKV 358
A KA + PVV+CPGFGNDA DY+NP++ G E F +AL +RG D V+P+ R +W VAG +L +F+ GT +P G Y WY++++
Sbjct: 45 AAKADVSKVPVVVCPGFGNDAIDYSNPLEQGREKGFVTALVKRGFDPELISVLPLKRYEWARVAGGLLELDFYLGTAKPTGLGYGWYVRRL 135
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A835WC61_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WC61_CHLIN) HSP 1 Score: 92.4 bits (228), Expect = 1.370e-19 Identity = 49/101 (48.51%), Postives = 60/101 (59.41%), Query Frame = 2
Query: 59 LRSVEGFAVPTMALKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKVS 361
LR AVP + AP + PP+VI PGFGN A DYT P G EE A A+ L RG FVVPV R DW VA A+ T +FW + P Y+WYL++V+
Sbjct: 64 LRWARPAAVPRV--DAPVDAPPIVILPGFGNAATDYTAPF-GNEEAAIATRLAVRGWRPFVVPVERKDWFKVARAIFTRKFWSSQLTTE-PGYTWYLERVA 160
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A2K3E6B5_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E6B5_CHLRE) HSP 1 Score: 91.3 bits (225), Expect = 2.650e-19 Identity = 49/101 (48.51%), Postives = 59/101 (58.42%), Query Frame = 2
Query: 59 LRSVEGFAVPTMALKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKVS 361
LR VP + APA+ PPVVI PGFGN DYT P G EE A A+ L RG FVVPV R DW VA A+ T +FW + P Y+WYL++V+
Sbjct: 29 LRWARPSTVPRV--DAPADAPPVVILPGFGNATTDYTAPF-GNEEAAIATRLAVRGWRPFVVPVERKDWFKVARAIFTRKFWSSQLTTE-PGYTWYLERVA 125
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A836B6Z5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B6Z5_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 6.250e-19 Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 2
Query: 98 LKAPANCPPVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDTFVVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKVS 361
+ APA+ PP+VI PGFGN DYT P G +E A A+ L RG FVVPV R DW VA A+ T +FW + P Y+WYL++V+
Sbjct: 36 VDAPADAPPIVILPGFGNATTDYTAPF-GNKEAAIATRLAVRGWQPFVVPVERKDWFKVARAIFTRKFWSSQLTTE-PGYTWYLERVA 121
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A7S2KQC6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KQC6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 6.880e-19 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2
Query: 122 PVVICPGFGNDARDYTNPVDGGEEVAFASALERRGLDT---FVVPVARSDWLNVAGAVLT-PEFWKGTCRPDGPAYSWYLQKV 358
PVVICPGFGNDA DY NP+D GE+ F +AL +RG + V+P+ R +W+ VAG + P F+ TC P+G Y WY++++
Sbjct: 8 PVVICPGFGNDAIDYLNPLDQGEDYGFVNALIKRGFNPDLITVLPLKRYEWIRVAGGLFDIPNFYTMTCTPEGLGYGWYIKRL 90
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Match: A0A7S0HMT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HMT8_9EUKA) HSP 1 Score: 51.6 bits (122), Expect = 4.250e-6 Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 2
Query: 239 VVPVARSDWLNVAGAVLTPEFWKGTCRPDGPAYSWYLQKV 358
VVP+ R+DW+NVA +F G +P+GPA+ WYLQK
Sbjct: 8 VVPIVRTDWINVAKGAADLKFITGDAQPEGPAFRWYLQKA 47 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9435.17465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9435.17465.1 >prot_S-dermatodea_contig9435.17465.1 ID=prot_S-dermatodea_contig9435.17465.1|Name=mRNA_S-dermatodea_contig9435.17465.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=117bp MAGLYRYVLCLVGLGLRSVEGFAVPTMALKAPANCPPVVICPGFGNDARDback to top mRNA from alignment at S-dermatodea_contig9435:5281..8545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9435.17465.1 ID=mRNA_S-dermatodea_contig9435.17465.1|Name=mRNA_S-dermatodea_contig9435.17465.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3265bp|location=Sequence derived from alignment at S-dermatodea_contig9435:5281..8545+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9435:5281..8545+ >mRNA_S-dermatodea_contig9435.17465.1 ID=mRNA_S-dermatodea_contig9435.17465.1|Name=mRNA_S-dermatodea_contig9435.17465.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at S-dermatodea_contig9435:5281..8545+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |