mRNA_S-dermatodea_contig9428.17460.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A6H5JJI9_9PHAE (SPRY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI9_9PHAE) HSP 1 Score: 401 bits (1031), Expect = 6.350e-128 Identity = 267/599 (44.57%), Postives = 332/599 (55.43%), Query Frame = 1
Query: 250 LLLLSSEWLFVKDLLECRRVDRSFQAASKETSLWKRLAHHLWVQALVDGDTAGAMAEEGTT--LHPDAPADTTMEDVCRCMVGAWPTHIDLTDRRSRDGPFQAIVDGVLQPV-AGTTSSTLGGVPLPIKS--DTPSASSRGKCTGLVFRGTLGGDRAVKANVPFPWMENLPRSRVAFAPQGASSSQGK--VNTLSANGSVEASIKYPHSFLAHVRSGSPFATRWPGHAAHKDAGPEGGAGGAAVARGVGILDKPAWPGLWPGGSAQLDELREELIANGVGIYGGDGYWNGSGMADSAKTEEFRATLDRIPSSGPSASFRAGYTAYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNG----PAKVDNRTPFGPGDTVGCGLLYPPALAQY---LRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNAFKFDVPAFEAQIFERESTQSDACLPREPFDHTAAIRKVYSSAQGITNPRLLSPYLRLHTLEMEAGDLGA----------PGSSGVLDSESEILRRSLKNVKTRVP 1974
+LL ++ WL ++DLL V+RSF+ +K+ LWK A L+ ALVDG + EG + LH DAP + T++D+CRCMVGAWPTHID R D QA + GVLQP+ AG + G ++ +A + G C G+VFRG LGGDRAV+ANVPFPW R+R P GA S+G V + YP LA V++G+PFA WPGHAA AGG G GGS + + R + +G G+ D + E R ++R+PSSGP+ F AGYTAYFEI++G+ + PL + F L+QCVAIGLA FP+ ++QPGWD+ SWGLHSDDG HH G PA D T FGPGDTVGCGLLYP LA Y L R G L +G SG G +FFTKNGR+LGMA V+V +PLYPCVGLDSH V NFG F FDVPAFEA +F + S A RE HT I+ VY G TNPRLL P+LRL E G A P GVL SESE+LRRSLK++++ P
Sbjct: 48 VLLSAATWLPIRDLLALGTVNRSFRDLTKDDMLWKSAAVFLFRSALVDGQNS---LVEGVSVGLHKDAPGNLTLQDICRCMVGAWPTHIDRHWRA--DELLQASIGGVLQPLQAGAAGGGVSGSGADPENAQQADTALAAGLCDGVVFRGGLGGDRAVRANVPFPWA-GCGRTRTQ-PPCGADMSRGARLVRMELTTYDRPVYLHYPDVVLARVKAGAPFALLWPGHAAA--------AGG----------------GEGEGGSGE--DSRGGNVGHG-------------GLVD--ENERVRLKVERLPSSGPAPFFHAGYTAYFEITLGDTMAPLEQPRDEDFHLEQCVAIGLAHDNFPLEDKQPGWDRNSWGLHSDDGCFHHRGAIALPATADPTT-FGPGDTVGCGLLYPRGLAHYEHWLSGRGGALPT--AGENDSG----GNNGAVFFTKNGRYLGMASRRVNVKRPLYPCVGLDSHCCVTVNFGVKPFAFDVPAFEA-LFTGAALGS-APPVRERRCHTDDIKNVYCGRNGFTNPRLLCPHLRLQPPVDEEGQDDARVPKTTRGSVPKGVGVLASESELLRRSLKSIRSSSP 589
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: D7G760_ECTSI (SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G760_ECTSI) HSP 1 Score: 278 bits (711), Expect = 1.160e-82 Identity = 223/593 (37.61%), Postives = 276/593 (46.54%), Query Frame = 1
Query: 250 LLLLSSEWLFVKDLLECRRVDRSFQAASKETSLWKRLAHHLWVQALVDGDTAGAMAEEGTT--LHPDAPADTTMEDVCRCMVGAWPTHIDLTDRRSRDGPFQAIVDGVLQPV-AGTTSSTLGGVPLPI----KSDTPSASSRGKCTGLVFRGTLGGDRAVKANVPFPWMENLPRSRVAFAPQGASSSQGKVNTLSANGSVEASIKYPHSFLAHVRSGSPFATRWPGHAAHKDAGPEGGAGGAAVARGVGILDKPAWPGLWPGGSAQLDELREELIANGVGIYGGDGYWNGSGMADSAKTEEFRATLDRIPSSGPSASFRAGYTAYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVD---NRTPFGPGDTVGCGLLYPPALAQY---LRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNAFKFDVPAFEAQIFERESTQSDACLPREPFDHTAAIRKVYSSAQGITNPRLLSPYLRLHTL--EMEAGDLGAPGSS-------GVLDSESEILRRSLKNVK 1962
+LL ++ WL ++DLL VDRSF+ +K+ LWK A L+ ALVDG ++ EG + LH DAP + T++D+CRCMVGAWPTHID R D QA + GVLQP+ AG S + G ++DT A + G C G+VFRG LGGDRAV+ANVPFPW R+R + P+GA S+G ++ EL T DR A A TA E+S G G+ T K ++QPGWD+ SWGLHSDDG HH G + + T FGPGDTVGCGLLYP LA Y L R G L +G SG + G IFFTKNGR+LGMA V+V +PLYPCVGLDSH V NFG F FDVPAFEA +F + S A RE HT I+KVYS G TNPR+L P+LRL E D P ++ GVL SESE+LRRSLK+++
Sbjct: 24 VLLSAASWLPIRDLLALGTVDRSFRDLTKDDMLWKLAAVFLFRSALVDGQSS---LVEGVSVGLHKDAPGNLTLQDICRCMVGAWPTHIDRHWRA--DELLQASIGGVLQPLQAGAASGGVSGSDADPENAQRADT--ALAAGLCDGVVFRGGLGGDRAVRANVPFPWA-GCGRTR-SQRPRGADMSRGS-----------------------------------------------------------------------------SLVKMELT-----------------------------TYDR-------AKAAAARTAAVEMS-----------GTAGWS--------TRTRK----DKQPGWDRNSWGLHSDDGCFHHRGAIALSATADPTTFGPGDTVGCGLLYPRGLAHYEHWLSGRGGALPT--AGENDSG----GSKGAIFFTKNGRYLGMASRRVNVKRPLYPCVGLDSHCCVAVNFGAKPFAFDVPAFEA-LFTGAALGS-APPVRERRCHTDDIKKVYSGRNGFTNPRVLCPHLRLQPPVDEERQNDARVPKTTRNVPKGVGVLASESELLRRSLKSIR 463
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A5A8DVX2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DVX2_CAFRO) HSP 1 Score: 108 bits (270), Expect = 1.180e-20 Identity = 75/225 (33.33%), Postives = 101/225 (44.89%), Query Frame = 1
Query: 1090 WNGSGMADSAKTEEFRATLD---RIPSSGPSASFRAGYT----------AYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVDNRTPFGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGG-IFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNA---FKFDVPAF 1713
+NGSG A+ R TL +P P+A+ AYFE+S+G W CVA+GL T +F + PGWD+ S+G HSDDGF H+ FGPGD VGCGL P L P+ + ++++ IFFT NGR +G A+ VD + +P VG+D A V NFG +A F F + F
Sbjct: 171 FNGSG----ARLAHLRRTLPGVITVPQRAPAAALGGARAPPVRLLPAALAYFEVSIGRAHRD------WTPGRSSCVAVGLCTRRFVLAGCLPGWDRHSYGWHSDDGFVFHSSGHGSPFGPAFGPGDVVGCGLDTLPCL-------------------PTDSRGFDSSAARIFFTLNGRMVGYAFEAVDAARRWHPVVGIDGPAPVRVNFGSDAREPFAFPLARF 366
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: L8H244_ACACA (SPRY domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H244_ACACA) HSP 1 Score: 106 bits (264), Expect = 5.410e-20 Identity = 68/178 (38.20%), Postives = 90/178 (50.56%), Query Frame = 1
Query: 1201 YFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVDNRTPFGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHAT-VDFNFGKNAFKFDVPAFEAQIFE 1731
YFEI+V ++ G G+ +A+GL +P+ N+QPGW K S+G H DDG +HN + + FG GDTVGCGL+Y TG +FFTKNG+FLG+ Y + K L+P VGL S A V FN GK FKF+ FEA++ E
Sbjct: 120 YFEITVLDQ-------GLKGY-----IAVGLTDVNYPL-NKQPGWVKHSYGYHGDDGMAYHNQGSGIPFGPRFGTGDTVGCGLIYE-------------------------------TGEVFFTKNGKFLGVGYSNAQ-GKELFPSVGLHSSAEKVVFNLGKKPFKFN---FEAEVVE 249
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A813CPA2_9DINO (Ranbp9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPA2_9DINO) HSP 1 Score: 105 bits (261), Expect = 6.150e-20 Identity = 74/225 (32.89%), Postives = 100/225 (44.44%), Query Frame = 1
Query: 1090 WNGSGMADSAKTEEFRATLD---RIPSSGPSASFRAGYT----------AYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVDNRTPFGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGG-IFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNA---FKFDVPAF 1713
+NGSG A+ R TL +P P+A+ AYFE+S+G W CVA+GL T +F + PGWD+ S+G HSDDGF H+ FG GD VGCGL P L P+ + ++++ IFFT NGR +G A+ VD + +P VG+D A V NFG +A F F + F
Sbjct: 169 FNGSG----ARLAHLRRTLPGVITVPQRAPAAALGGAPAPPVRLLPAALAYFEVSIGRAHRD------WTPGRSSCVAVGLCTRRFVLAGCLPGWDRHSYGWHSDDGFVFHSSGHGSPFGPAFGQGDVVGCGLDTLPCL-------------------PTDSRGFDSSAARIFFTLNGRMVGYAFEAVDAARRWHPVVGIDGPAPVRVNFGSDAREPFAFPLARF 364
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A7S4RS47_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RS47_9DINO) HSP 1 Score: 103 bits (258), Expect = 8.700e-20 Identity = 73/210 (34.76%), Postives = 100/210 (47.62%), Query Frame = 1
Query: 1159 SSGPSASFRAGYT--AYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFP---ITNRQPGWDKKSWGLHSDDGFTHHN--------------------GPAKVD-NRTPFGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRA--PSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNAFKFDV 1704
SS P +R + +Y+E+S+ E R P + +QCV++GLAT I Q GW++ SW LH DDG +H GP ++ R FG GD VGCG+L + SR G A PS + T GIFFT NG LG+ + VD + L+PCVG+D+H ++FNFG F FD+
Sbjct: 216 SSSPVRQWRLAHRLRSYYEVSILPSPE---RERP---QTEQCVSVGLATRHLSARSIRREQAGWNRSSWALHGDDGNLYHGSGQGWPLGTNRPFSLCCPWAGPRRIAAGRRLFGAGDIVGCGILA-------VGSRTTSPTSSAPGEAAPPSSRRGSRTRTGIFFTLNGDLLGVHFV-VDQQRTLWPCVGIDAHWLLEFNFGGKPFYFDL 411
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.920e-19 Identity = 67/181 (37.02%), Postives = 85/181 (46.96%), Query Frame = 1
Query: 1186 AGYTAYFEISVGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVDNRTP-FGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNA-FKFDVPAFEAQ 1722
A +YFE+S+ R G G + +C+AIGL+ +F + + PGWD S+G HSDDG HN + + P FG GD VGCGL Y IFFT NGR+LG+A+ V LYP VG+DS A V N G A F F V AFE +
Sbjct: 1271 ARVVSYFEVSIAP------RTGARGAGVPECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFRYGPTFGRGDVVGCGLDYS--------------------------HGGGVCADIFFTLNGRYLGVAFAGVRAGG-LYPTVGIDSAAPVRINLGGAAPFAFGVGAFERE 1418
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A813KQF0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KQF0_POLGL) HSP 1 Score: 99.4 bits (246), Expect = 2.580e-18 Identity = 70/237 (29.54%), Postives = 98/237 (41.35%), Query Frame = 1
Query: 1198 AYFEIS-VGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITN--RQPGWDKKSWGLHSDDGFTHHNG------------------------------------PAKVDNRTP--FGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKP-LYPCVGLDSHATVDFNFGKNAFKFDVPAFEA-QIFERESTQSDACLPREPFD 1779
+Y+E++ V E P + P QCV++GLAT+ I N Q GW+ SW LH DDG +H P + +R P FG GD VGCG++ P + + GIFFT NG FLG+ + DV KP +PCVG+D+H +DFNFG + F F V + + Q+F + + P D
Sbjct: 198 SYYEVTIVPEPSAPRMSRPP--LRRSQCVSVGLATSGLTIQNLRSQAGWNPSSWALHGDDGQLYHGRGQGSRFQVLMGRQPQQELGPKDGNSAAAAFLDVHRHPRSLSSRNPPSFGAGDVVGCGVIDLPLAHE------------------------DGCQGIFFTLNGEFLGVCFLLSDVDKPRFWPCVGIDAHWLLDFNFGSSPFSFRVDSLHSSQLFASQPLHTQVIARNPPVD 408
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A813GFJ7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GFJ7_POLGL) HSP 1 Score: 97.1 bits (240), Expect = 3.780e-18 Identity = 70/237 (29.54%), Postives = 99/237 (41.77%), Query Frame = 1
Query: 1198 AYFEIS-VGEKLEPLVRAGPWGFELDQCVAIGLATAKFPITN--RQPGWDKKSWGLHSDDGFTHHN-------------------GPA-----------------KVDNRTP--FGPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKP-LYPCVGLDSHATVDFNFGKNAFKFDVPAFEA-QIFERESTQSDACLPREPFD 1779
+Y+E++ V E P + P QCV++GLAT+ I N Q GW+ SW LH DDG +H GP + +R P FG GD VGCG++ P + + GIFFT NG FLG+ + D+ KP +PCVG+D+H +DFNFG + F F V + + Q+F + + P D
Sbjct: 68 SYYEVTIVPEPSAPRMSRPP--LRRSQCVSVGLATSGLTIQNLRSQSGWNPSSWALHGDDGQLYHGRGQGSRFQALMGRNPQQELGPKDGNSAAAAFLDVHRQQRSLSSRNPPSFGAGDVVGCGVIDLPLAHE------------------------DGCQGIFFTLNGEFLGVCFLLSDLDKPRFWPCVGIDAHWLLDFNFGSSPFSFRVDSLHSSQLFASQPLDAQVIARNPPVD 278
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Match: A0A7S3RFF7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RFF7_EMIHU) HSP 1 Score: 97.8 bits (242), Expect = 4.360e-18 Identity = 64/182 (35.16%), Postives = 81/182 (44.51%), Query Frame = 1
Query: 1198 AYFEISVGEKLEPLVRAGPWGFELD-----QCVAIGLATAKFPITNRQPGWDKKSWGLHSDDGFTHHNGPAKVDNRTPF-GPGDTVGCGLLYPPALAQYLRSRLGRLDPMLSGRAPSGMKSWETTGGIFFTKNGRFLGMAYCDVDVTKPLYPCVGLDSHATVDFNFGKNAFKFDVPAFEAQI 1725
AYFE+++ + G EL+ CVA+GL + FP+ RQPGWD S+G HSDDG H A P PGD VG G +LS R +FF++NG FLG Y PLYP VGLDS A V+FNFG + F D + +
Sbjct: 224 AYFEVTIWPR-------GGGAAELEWLPQSDCVAVGLGSRDFPLDGRQPGWDSASFGYHSDDGQAFHGHGASGRPLGPACSPGDVVGAGY------------------SLLSRR-------------VFFSRNGVFLGAPYVAPAQLMPLYPLVGLDSRAPVEFNFGASPFALDTASLPPSL 367 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9428.17460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9428.17460.1 >prot_S-dermatodea_contig9428.17460.1 ID=prot_S-dermatodea_contig9428.17460.1|Name=mRNA_S-dermatodea_contig9428.17460.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=657bp MSRPRDDLPTENRLEKRQRHSAGVCVAERQQLCQNYTIEAPVDSSDPISTback to top mRNA from alignment at S-dermatodea_contig9428:2786..8489+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9428.17460.1 ID=mRNA_S-dermatodea_contig9428.17460.1|Name=mRNA_S-dermatodea_contig9428.17460.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5704bp|location=Sequence derived from alignment at S-dermatodea_contig9428:2786..8489+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9428:2786..8489+ >mRNA_S-dermatodea_contig9428.17460.1 ID=mRNA_S-dermatodea_contig9428.17460.1|Name=mRNA_S-dermatodea_contig9428.17460.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3942bp|location=Sequence derived from alignment at S-dermatodea_contig9428:2786..8489+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |