mRNA_S-dermatodea_contig9424.17456.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 1.740e-134 Identity = 265/526 (50.38%), Postives = 319/526 (60.65%), Query Frame = 1
Query: 1 MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAKRRTLERAHKNMHTRRDP-INKDTGERTNIPQNRTVSYYCTCXXXXXXXXXXXALKASKHRKIELVSCSS------------APSAEQPVPGGGRRVG------------KGRDSIPEGDG------DETTRLTEEESLSDSPSSGGGLDVATDDRTELLAKSRRSSFSLRKNDTKSGGRNGRVSNGKGRTKEGASAGGEFDEHSGVRRRTLSCSPRHLLLGKAGCERRAG-------------EGYEYEMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
MVQKWAIG +INISGSIAINLGTN+MKLSHK+ + G DNT A R L+ + + +P IN++ + XXX + K ++H +E+ + + P +E P+ GG R G RD G+G +E LTEE SL+DSPSS G+ ++DDR ++ R+ + + E + GGE+D GVR+R LS SP G+ G R G +E +P W ALWYLGA+LLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGK ILRE+VT+RII GTATIILGNTLTLCFSPHQDDN++T +LKAFYD +YN LL ELA ALAMHA YK+FK SKE G+P+R+SDL MPLAYAICSAIVGTQSV+ AKCLSELLT+TF+GENQ+ S FTYLV +WLGTT+FWL RMNRALAMFHGLFIIPALQV
Sbjct: 1 MVQKWAIGTMINISGSIAINLGTNLMKLSHKMKKGEYRQHGDDNTSNNAIRSGLKSSDDDDLEAAEPMINREAND---SXXXXXXXXXXXXXXXHFFPSSLRSAKGAQHG-VEMTAYPADALVQERGGPGRVPDSE-PITNGGARAGGIGKLRGGGAGGSSRDLRGSGEGRGGADEEEMVGLTEE-SLTDSPSSTTGVSTSSDDRAAQHSRGRKXXXXXXXXXXXXXXXXXXX---QAKGAEPPTGGGEYDARPGVRKRPLSISPNQDGGGEEGFAERGGLEASGGSXXXXXXXXXAWEQQPPP--------EWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFRGENQLGSIFTYLVFAIWLGTTIFWLVRMNRALAMFHGLFIIPALQV 509
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 1.030e-127 Identity = 271/534 (50.75%), Postives = 320/534 (59.93%), Query Frame = 1
Query: 1 MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAKRRTLERAHKNMHTRRDPINKDTGERTNIPQNRTVSYYCTCXXXXXXXXXXXALKASKHRK--IELVSC------------SSAPSAEQPVPGGGRR---VGKGRDSIPE---------------GDGDETTRLTEEESLSDSPSSGGGLDVATDDRTELLAKSRRSSFS-----LRKNDTKSGGRNGRVSNGKGRTKEGASAGGEFDEHSGVRRRTLSCSPRH---------------LLLGKAGCERRAGEGYEYEMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
MVQKWAIGA+INISGSIAINLGTN+MKLSHK+ + G DNT A R L+ P + D E NR + XXXXXXXXXXX ++++ + +E+ + P +E GG R +GK R D +E LTEE SL++SPSS G+ ++DDR ++ R++ S G + G G K GE+DEH GVR+R L+ SP +E P W ALWYLGA+LLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGK ILRE+VT+RII GTATIILGNTLTLCFSPHQDDN++T +LKAFYD +YN LL ELA ALAMHA YK+FK SKE G+P+R+SDL MPLAYAICSAIVGTQSV+ AKCLSELLT+TFQGENQ+ S FTYLV +WLGTT+FWL RMN+ALAMFHGLFIIPALQV
Sbjct: 1 MVQKWAIGAMINISGSIAINLGTNLMKLSHKMKKGEYRQHGDDNTSNNAIRSGLK-----------PSDDDDLEAAEPMINRAANDXXXXXXXXXXXXXXXXSRSAQRAQHGVEMTAYPIDALVQERGGPGRVPDSESITNGGARAGGGIGKLRGXXXXXXXXXXXXXXXXRGGADEEEMVGLTEE-SLTESPSSTTGVSTSSDDRAAQHSRGRKALASPXXXXXXXXXXXXXXXKGGHAKGTGPPKRA----GEYDEHPGVRKRPLNISPNQGGXXXEXGFAXXXXXXXXXXXXXXXXXXXXXXWEQPPTT------PPEWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFQGENQLGSIFTYLVFAIWLGTTIFWLVRMNQALAMFHGLFIIPALQV 512
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7R9YAD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD8_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.080e-46 Identity = 97/230 (42.17%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 763 EMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATY-KAFKTSKEMGK-PKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
++E RVG + T +WY+G L+V G ++ F S GFAPQSLLA LGS+QF+SNV+ G+ +L+E VT+R I T ++LG+ L + F H++ +Y L+ Y + Y L L A +H Y K K +KE G Y PL+Y SAI+GTQ I AK S ++ T G+NQ+ P +++ I + ++FWL RMN AL MF GLFIIPALQV
Sbjct: 36 QLEARVGSAPSAESKVPTPKIWYIGVFLMVFGGILVFGSLGFAPQSLLAPLGSIQFVSNVIMGRFLLKETVTRRTIIATVLLMLGSALAVVFGDHEEQSYTLSDLEGLYTVGYVIFLVLVLLLAALLHFVYVKYHKYAKEGGPIAPPYHKYVYPLSYCNTSAIIGTQGAIFAKAASHIVDETISGDNQLKFPLSWVFIFGAIAGSIFWLVRMNSALKMFAGLFIIPALQV 265
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7S1U9L0_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9L0_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.190e-44 Identity = 86/209 (41.15%), Postives = 133/209 (63.64%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFY-DLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKR-YSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W++G + + GSL+ FASFGFAPQS+LA+L +VQFI+N+ FGK +L E +TKR++ GT ++ G +L + FS H+ Y+++ L++ Y +L Y L F +A + + ++ G Y +L P++Y SA++GTQ ++ AKC+S LL +T G+NQ + FTY I VWL + ++W+ RM+ L +F G FIIP LQV
Sbjct: 80 WFIGTSIFICGSLLLFASFGFAPQSVLAALEAVQFITNIFFGKFVLGEAITKRMVLGTVALVGGMSLVVAFSKHETSLYSSEDLQSLYGELAYIVFLAFAGVTLIASRVLFNVYGARRQQGLENLPYHNLVYPISYCYFSAMIGTQQLLMAKCISNLLRLTGDGDNQFTHWFTYFCIAVWLLSAIYWVYRMDLGLKLFKGPFIIPVLQV 288
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A2R6W3B2_MARPO (Probable magnesium transporter n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W3B2_MARPO) HSP 1 Score: 158 bits (400), Expect = 1.380e-39 Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD----LDYNALLFFELAFALAMHATYKAFK----TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W G ++ +G+ +NF SFGFA QSLLA+LGSVQF+SNV F +L E VT RI+F TA I++GN + F HQ Y ++L A Y L Y ALL + ++ H YK + T E + + +PL+YAI S +GT SV+ AK LS L+ +T GE Q+ + FTYL+ ++LGT FW+ R+N LAMF + I+P LQ+
Sbjct: 73 WRFGVIVFSLGNCLNFISFGFAAQSLLAALGSVQFVSNVGFAYLVLNETVTGRILFATAFIVVGNIFLVAFGNHQSSTYTNEELLANYKDPLYLGYCALL---ILIVISQHFVYKRGRHLVMTRGEEAVGTFWRTM-VPLSYAIVSGAIGTHSVLFAKSLSILMRLTLSGETQLDAFFTYLIFFLFLGTASFWMARLNEGLAMFDAILIVPMLQI 283
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A6U2SCF9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2SCF9_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.050e-39 Identity = 90/219 (41.10%), Postives = 132/219 (60.27%), Query Frame = 1
Query: 793 GRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFY-DLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQG-ENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQ 1443
G D+ +W +G L+ V GSL NFAS+ F QS+LASL S+QF++N++FGK +L VT R+ GT I+ G L++ FS ++ + + Y + Y A + F +A + + + F+ + +P +Y+D A+PL Y++ SA+ GTQSV+QAK L+ELL + +G EN S F Y I +WL T V WL R+N AL F+ LFIIP LQ
Sbjct: 117 GEDIKPSESNIWLVGTLIFVSGSLFNFASYAFGAQSMLASLESIQFVTNLIFGKYMLGCTVTGRMALGTFLIVTGTVLSVQFSSKDRLDFTIDDIISLYQNPKYIAYMVFVVALLVILQIAFDRFELAVLKNRPMKYTDSAVPLIYSVWSALFGTQSVVQAKVLAELLEVQSRGKENIFQSWFLYFTILMWLSTVVVWLKRLNNALRKFNPLFIIPLLQ 335
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A2K1K606_PHYPA (Probable magnesium transporter n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K606_PHYPA) HSP 1 Score: 154 bits (390), Expect = 2.500e-38 Identity = 88/210 (41.90%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLD-YNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W +G ++ +G+++NF SFG+A QSLLA+LGSVQF+SNV F +L EIVT+RII T I++GN + F HQ Y QL A Y Y LF L A H+ Y+ + + P + +P YA+ S VG+ SV+ AK LS LL T +G+NQ+ FTY+V +++GT FW+ R+N LAMF + I+P LQ+
Sbjct: 60 WRIGVIVFSLGNILNFISFGYAAQSLLAALGSVQFVSNVFFAYLMLNEIVTRRIILATVFIMVGNGFLVAFGNHQSVIYTHGQLLASYKGHIYLTYLFILLCIVAAHHSIYRRGRQLAASRGEDPVGVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGDNQLDGWFTYIVFFLFVGTASFWMARLNDGLAMFDAILIVPMLQI 269
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7I4DFZ4_PHYPA (Probable magnesium transporter n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DFZ4_PHYPA) HSP 1 Score: 152 bits (385), Expect = 5.820e-38 Identity = 85/210 (40.48%), Postives = 121/210 (57.62%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD-LDYNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W +G + G+++NF SFG+A QSLLA+LGS+QF+SNV F +L E+VT+RI+ T+ I++GN + F HQ Y ++QL Y Y F L HA Y+ + T P + +P YA+ S VG+ SV+ AK LS LL T +GENQ+ FTYLV ++ GT FW+ R+N LA+F + I+P LQ+
Sbjct: 58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQI 267
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7I4DHS0_PHYPA (Probable magnesium transporter n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DHS0_PHYPA) HSP 1 Score: 152 bits (385), Expect = 1.310e-37 Identity = 85/210 (40.48%), Postives = 121/210 (57.62%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD-LDYNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W +G + G+++NF SFG+A QSLLA+LGS+QF+SNV F +L E+VT+RI+ T+ I++GN + F HQ Y ++QL Y Y F L HA Y+ + T P + +P YA+ S VG+ SV+ AK LS LL T +GENQ+ FTYLV ++ GT FW+ R+N LA+F + I+P LQ+
Sbjct: 58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQI 267
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A8J5R4_CHLRE (Probable magnesium transporter (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J5R4_CHLRE) HSP 1 Score: 147 bits (372), Expect = 4.370e-37 Identity = 80/213 (37.56%), Postives = 128/213 (60.09%), Query Frame = 1
Query: 826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD----LDYNALLFFELA--FALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
W +G VG+++NF SFGFA QSLLA+LGS+QF+SNV+F +L E + + +I T I+ G L + F Y +QL Y + Y L+ + + L +H + K K P+ + +P+AYA+ SA++GTQSV+ +K +S +L +TF GENQ+ + +T+LV+ ++L T VFW++R+N+ L MF + I+P +Q+
Sbjct: 48 WVVGMSFFSVGNILNFTSFGFAAQSLLAALGSIQFVSNVIFAYFVLHEQINRMVIIATTCIVGGCVLLVVFGNQSGATYTVKQLTQLYGKPAYVVYLCLMGVGVVGGYMLYLHGSKKVAKNG-----PRGFWYAILPVAYAVFSALIGTQSVLFSKSMSVILRLTFTGENQLGNWYTWLVLPLFLATAVFWISRLNKGLRMFPAMIIVPVMQI 255 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9424.17456.1 >prot_S-dermatodea_contig9424.17456.1 ID=prot_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=492bp MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAKback to top mRNA from alignment at S-dermatodea_contig9424:5090..8567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9424.17456.1 ID=mRNA_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3478bp|location=Sequence derived from alignment at S-dermatodea_contig9424:5090..8567+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9424:5090..8567+ >mRNA_S-dermatodea_contig9424.17456.1 ID=mRNA_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2952bp|location=Sequence derived from alignment at S-dermatodea_contig9424:5090..8567+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |