mRNA_S-dermatodea_contig9424.17456.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9424.17456.1
Unique NamemRNA_S-dermatodea_contig9424.17456.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 1.740e-134
Identity = 265/526 (50.38%), Postives = 319/526 (60.65%), Query Frame = 1
Query:    1 MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAKRRTLERAHKNMHTRRDP-INKDTGERTNIPQNRTVSYYCTCXXXXXXXXXXXALKASKHRKIELVSCSS------------APSAEQPVPGGGRRVG------------KGRDSIPEGDG------DETTRLTEEESLSDSPSSGGGLDVATDDRTELLAKSRRSSFSLRKNDTKSGGRNGRVSNGKGRTKEGASAGGEFDEHSGVRRRTLSCSPRHLLLGKAGCERRAG-------------EGYEYEMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            MVQKWAIG +INISGSIAINLGTN+MKLSHK+ +      G DNT   A R  L+ +  +     +P IN++  +                XXX        + K ++H  +E+ +  +             P +E P+  GG R G              RD    G+G      +E   LTEE SL+DSPSS  G+  ++DDR    ++ R+                      + +  E  + GGE+D   GVR+R LS SP     G+ G   R G                 +E +P           W   ALWYLGA+LLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGK ILRE+VT+RII GTATIILGNTLTLCFSPHQDDN++T +LKAFYD +YN LL  ELA ALAMHA YK+FK SKE G+P+R+SDL MPLAYAICSAIVGTQSV+ AKCLSELLT+TF+GENQ+ S FTYLV  +WLGTT+FWL RMNRALAMFHGLFIIPALQV
Sbjct:    1 MVQKWAIGTMINISGSIAINLGTNLMKLSHKMKKGEYRQHGDDNTSNNAIRSGLKSSDDDDLEAAEPMINREAND---SXXXXXXXXXXXXXXXHFFPSSLRSAKGAQHG-VEMTAYPADALVQERGGPGRVPDSE-PITNGGARAGGIGKLRGGGAGGSSRDLRGSGEGRGGADEEEMVGLTEE-SLTDSPSSTTGVSTSSDDRAAQHSRGRKXXXXXXXXXXXXXXXXXXX---QAKGAEPPTGGGEYDARPGVRKRPLSISPNQDGGGEEGFAERGGLEASGGSXXXXXXXXXAWEQQPPP--------EWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFRGENQLGSIFTYLVFAIWLGTTIFWLVRMNRALAMFHGLFIIPALQV 509          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 1.030e-127
Identity = 271/534 (50.75%), Postives = 320/534 (59.93%), Query Frame = 1
Query:    1 MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAKRRTLERAHKNMHTRRDPINKDTGERTNIPQNRTVSYYCTCXXXXXXXXXXXALKASKHRK--IELVSC------------SSAPSAEQPVPGGGRR---VGKGRDSIPE---------------GDGDETTRLTEEESLSDSPSSGGGLDVATDDRTELLAKSRRSSFS-----LRKNDTKSGGRNGRVSNGKGRTKEGASAGGEFDEHSGVRRRTLSCSPRH---------------LLLGKAGCERRAGEGYEYEMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            MVQKWAIGA+INISGSIAINLGTN+MKLSHK+ +      G DNT   A R  L+           P + D  E      NR  +     XXXXXXXXXXX  ++++  +  +E+ +                P +E    GG R    +GK R                     D +E   LTEE SL++SPSS  G+  ++DDR    ++ R++  S                 G  + G G  K      GE+DEH GVR+R L+ SP                                  +E  P           W   ALWYLGA+LLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGK ILRE+VT+RII GTATIILGNTLTLCFSPHQDDN++T +LKAFYD +YN LL  ELA ALAMHA YK+FK SKE G+P+R+SDL MPLAYAICSAIVGTQSV+ AKCLSELLT+TFQGENQ+ S FTYLV  +WLGTT+FWL RMN+ALAMFHGLFIIPALQV
Sbjct:    1 MVQKWAIGAMINISGSIAINLGTNLMKLSHKMKKGEYRQHGDDNTSNNAIRSGLK-----------PSDDDDLEAAEPMINRAANDXXXXXXXXXXXXXXXXSRSAQRAQHGVEMTAYPIDALVQERGGPGRVPDSESITNGGARAGGGIGKLRGXXXXXXXXXXXXXXXXRGGADEEEMVGLTEE-SLTESPSSTTGVSTSSDDRAAQHSRGRKALASPXXXXXXXXXXXXXXXKGGHAKGTGPPKRA----GEYDEHPGVRKRPLNISPNQGGXXXEXGFAXXXXXXXXXXXXXXXXXXXXXXWEQPPTT------PPEWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFQGENQLGSIFTYLVFAIWLGTTIFWLVRMNQALAMFHGLFIIPALQV 512          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7R9YAD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD8_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.080e-46
Identity = 97/230 (42.17%), Postives = 135/230 (58.70%), Query Frame = 1
Query:  763 EMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLDYNALLFFELAFALAMHATY-KAFKTSKEMGK-PKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            ++E RVG     +    T  +WY+G  L+V G ++ F S GFAPQSLLA LGS+QF+SNV+ G+ +L+E VT+R I  T  ++LG+ L + F  H++ +Y    L+  Y + Y   L   L  A  +H  Y K  K +KE G     Y     PL+Y   SAI+GTQ  I AK  S ++  T  G+NQ+  P +++ I   +  ++FWL RMN AL MF GLFIIPALQV
Sbjct:   36 QLEARVGSAPSAESKVPTPKIWYIGVFLMVFGGILVFGSLGFAPQSLLAPLGSIQFVSNVIMGRFLLKETVTRRTIIATVLLMLGSALAVVFGDHEEQSYTLSDLEGLYTVGYVIFLVLVLLLAALLHFVYVKYHKYAKEGGPIAPPYHKYVYPLSYCNTSAIIGTQGAIFAKAASHIVDETISGDNQLKFPLSWVFIFGAIAGSIFWLVRMNSALKMFAGLFIIPALQV 265          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7S1U9L0_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9L0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.190e-44
Identity = 86/209 (41.15%), Postives = 133/209 (63.64%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFY-DLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKR-YSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W++G  + + GSL+ FASFGFAPQS+LA+L +VQFI+N+ FGK +L E +TKR++ GT  ++ G +L + FS H+   Y+++ L++ Y +L Y   L F     +A    +  +   ++ G     Y +L  P++Y   SA++GTQ ++ AKC+S LL +T  G+NQ +  FTY  I VWL + ++W+ RM+  L +F G FIIP LQV
Sbjct:   80 WFIGTSIFICGSLLLFASFGFAPQSVLAALEAVQFITNIFFGKFVLGEAITKRMVLGTVALVGGMSLVVAFSKHETSLYSSEDLQSLYGELAYIVFLAFAGVTLIASRVLFNVYGARRQQGLENLPYHNLVYPISYCYFSAMIGTQQLLMAKCISNLLRLTGDGDNQFTHWFTYFCIAVWLLSAIYWVYRMDLGLKLFKGPFIIPVLQV 288          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A2R6W3B2_MARPO (Probable magnesium transporter n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W3B2_MARPO)

HSP 1 Score: 158 bits (400), Expect = 1.380e-39
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD----LDYNALLFFELAFALAMHATYKAFK----TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W  G ++  +G+ +NF SFGFA QSLLA+LGSVQF+SNV F   +L E VT RI+F TA I++GN   + F  HQ   Y  ++L A Y     L Y ALL   +   ++ H  YK  +    T  E      +  + +PL+YAI S  +GT SV+ AK LS L+ +T  GE Q+ + FTYL+  ++LGT  FW+ R+N  LAMF  + I+P LQ+
Sbjct:   73 WRFGVIVFSLGNCLNFISFGFAAQSLLAALGSVQFVSNVGFAYLVLNETVTGRILFATAFIVVGNIFLVAFGNHQSSTYTNEELLANYKDPLYLGYCALL---ILIVISQHFVYKRGRHLVMTRGEEAVGTFWRTM-VPLSYAIVSGAIGTHSVLFAKSLSILMRLTLSGETQLDAFFTYLIFFLFLGTASFWMARLNEGLAMFDAILIVPMLQI 283          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A6U2SCF9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2SCF9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.050e-39
Identity = 90/219 (41.10%), Postives = 132/219 (60.27%), Query Frame = 1
Query:  793 GRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFY-DLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQG-ENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQ 1443
            G D+      +W +G L+ V GSL NFAS+ F  QS+LASL S+QF++N++FGK +L   VT R+  GT  I+ G  L++ FS     ++    + + Y +  Y A + F +A  + +   +  F+ +    +P +Y+D A+PL Y++ SA+ GTQSV+QAK L+ELL +  +G EN   S F Y  I +WL T V WL R+N AL  F+ LFIIP LQ
Sbjct:  117 GEDIKPSESNIWLVGTLIFVSGSLFNFASYAFGAQSMLASLESIQFVTNLIFGKYMLGCTVTGRMALGTFLIVTGTVLSVQFSSKDRLDFTIDDIISLYQNPKYIAYMVFVVALLVILQIAFDRFELAVLKNRPMKYTDSAVPLIYSVWSALFGTQSVVQAKVLAELLEVQSRGKENIFQSWFLYFTILMWLSTVVVWLKRLNNALRKFNPLFIIPLLQ 335          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A2K1K606_PHYPA (Probable magnesium transporter n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K606_PHYPA)

HSP 1 Score: 154 bits (390), Expect = 2.500e-38
Identity = 88/210 (41.90%), Postives = 124/210 (59.05%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYDLD-YNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W +G ++  +G+++NF SFG+A QSLLA+LGSVQF+SNV F   +L EIVT+RII  T  I++GN   + F  HQ   Y   QL A Y    Y   LF  L    A H+ Y+  +   +     P     + +P  YA+ S  VG+ SV+ AK LS LL  T +G+NQ+   FTY+V  +++GT  FW+ R+N  LAMF  + I+P LQ+
Sbjct:   60 WRIGVIVFSLGNILNFISFGYAAQSLLAALGSVQFVSNVFFAYLMLNEIVTRRIILATVFIMVGNGFLVAFGNHQSVIYTHGQLLASYKGHIYLTYLFILLCIVAAHHSIYRRGRQLAASRGEDPVGVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGDNQLDGWFTYIVFFLFVGTASFWMARLNDGLAMFDAILIVPMLQI 269          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7I4DFZ4_PHYPA (Probable magnesium transporter n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DFZ4_PHYPA)

HSP 1 Score: 152 bits (385), Expect = 5.820e-38
Identity = 85/210 (40.48%), Postives = 121/210 (57.62%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD-LDYNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W +G  +   G+++NF SFG+A QSLLA+LGS+QF+SNV F   +L E+VT+RI+  T+ I++GN   + F  HQ   Y ++QL   Y    Y    F  L      HA Y+  +  T      P     + +P  YA+ S  VG+ SV+ AK LS LL  T +GENQ+   FTYLV  ++ GT  FW+ R+N  LA+F  + I+P LQ+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQI 267          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A0A7I4DHS0_PHYPA (Probable magnesium transporter n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DHS0_PHYPA)

HSP 1 Score: 152 bits (385), Expect = 1.310e-37
Identity = 85/210 (40.48%), Postives = 121/210 (57.62%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD-LDYNALLFFELAFALAMHATYKAFK--TSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W +G  +   G+++NF SFG+A QSLLA+LGS+QF+SNV F   +L E+VT+RI+  T+ I++GN   + F  HQ   Y ++QL   Y    Y    F  L      HA Y+  +  T      P     + +P  YA+ S  VG+ SV+ AK LS LL  T +GENQ+   FTYLV  ++ GT  FW+ R+N  LA+F  + I+P LQ+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQI 267          
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Match: A8J5R4_CHLRE (Probable magnesium transporter (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J5R4_CHLRE)

HSP 1 Score: 147 bits (372), Expect = 4.370e-37
Identity = 80/213 (37.56%), Postives = 128/213 (60.09%), Query Frame = 1
Query:  826 WYLGALLLVVGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQDDNYNTQQLKAFYD----LDYNALLFFELA--FALAMHATYKAFKTSKEMGKPKRYSDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVITVWLGTTVFWLTRMNRALAMFHGLFIIPALQV 1446
            W +G     VG+++NF SFGFA QSLLA+LGS+QF+SNV+F   +L E + + +I  T  I+ G  L + F       Y  +QL   Y     + Y  L+   +   + L +H + K  K       P+ +    +P+AYA+ SA++GTQSV+ +K +S +L +TF GENQ+ + +T+LV+ ++L T VFW++R+N+ L MF  + I+P +Q+
Sbjct:   48 WVVGMSFFSVGNILNFTSFGFAAQSLLAALGSIQFVSNVIFAYFVLHEQINRMVIIATTCIVGGCVLLVVFGNQSGATYTVKQLTQLYGKPAYVVYLCLMGVGVVGGYMLYLHGSKKVAKNG-----PRGFWYAILPVAYAVFSALIGTQSVLFSKSMSVILRLTFTGENQLGNWYTWLVLPLFLATAVFWISRLNKGLRMFPAMIIVPVMQI 255          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9424.17456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6Y8_9PHAE1.740e-13450.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H4_ECTSI1.030e-12750.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YAD8_9STRA2.080e-4642.17Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1U9L0_9STRA1.190e-4441.15Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A2R6W3B2_MARPO1.380e-3942.79Probable magnesium transporter n=2 Tax=Marchantia ... [more]
A0A6U2SCF9_9STRA3.050e-3941.10Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2K1K606_PHYPA2.500e-3841.90Probable magnesium transporter n=2 Tax=Physcomitri... [more]
A0A7I4DFZ4_PHYPA5.820e-3840.48Probable magnesium transporter n=1 Tax=Physcomitri... [more]
A0A7I4DHS0_PHYPA1.310e-3740.48Probable magnesium transporter n=4 Tax=Physcomitri... [more]
A8J5R4_CHLRE4.370e-3737.56Probable magnesium transporter (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9424contigS-dermatodea_contig9424:5090..8567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.9
Seed ortholog evalue6.7e-111
Seed eggNOG ortholog2880.D7G9H4
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0012505,GO:0015693,GO:0016020,GO:0030001,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0070838,GO:0071944,GO:0072511,GO:0097708
EggNOG free text desc.magnesium ion transmembrane transporter activity
EggNOG OGsKOG2922@1,KOG2922@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons6
Model size1476
Cds size1476
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9424.17456.1prot_S-dermatodea_contig9424.17456.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9424 5090..8567 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925406.7756267-CDS-S-dermatodea_contig9424:5089..52091622925406.7756267-CDS-S-dermatodea_contig9424:5089..5209Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 5090..5209 +
1694079912.45975-CDS-S-dermatodea_contig9424:5089..52091694079912.45975-CDS-S-dermatodea_contig9424:5089..5209Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 5090..5209 +
1622925406.7873468-CDS-S-dermatodea_contig9424:6021..61741622925406.7873468-CDS-S-dermatodea_contig9424:6021..6174Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 6022..6174 +
1694079912.4754-CDS-S-dermatodea_contig9424:6021..61741694079912.4754-CDS-S-dermatodea_contig9424:6021..6174Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 6022..6174 +
1622925406.8042116-CDS-S-dermatodea_contig9424:6402..70831622925406.8042116-CDS-S-dermatodea_contig9424:6402..7083Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 6403..7083 +
1694079912.48555-CDS-S-dermatodea_contig9424:6402..70831694079912.48555-CDS-S-dermatodea_contig9424:6402..7083Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 6403..7083 +
1622925406.8152301-CDS-S-dermatodea_contig9424:7392..74881622925406.8152301-CDS-S-dermatodea_contig9424:7392..7488Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 7393..7488 +
1694079912.4984431-CDS-S-dermatodea_contig9424:7392..74881694079912.4984431-CDS-S-dermatodea_contig9424:7392..7488Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 7393..7488 +
1622925406.826676-CDS-S-dermatodea_contig9424:7785..80581622925406.826676-CDS-S-dermatodea_contig9424:7785..8058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 7786..8058 +
1694079912.507642-CDS-S-dermatodea_contig9424:7785..80581694079912.507642-CDS-S-dermatodea_contig9424:7785..8058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 7786..8058 +
1622925406.8408067-CDS-S-dermatodea_contig9424:8414..85671622925406.8408067-CDS-S-dermatodea_contig9424:8414..8567Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 8415..8567 +
1694079912.5169964-CDS-S-dermatodea_contig9424:8414..85671694079912.5169964-CDS-S-dermatodea_contig9424:8414..8567Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9424 8415..8567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9424.17456.1

>prot_S-dermatodea_contig9424.17456.1 ID=prot_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=492bp
MVQKWAIGAIINISGSIAINLGTNIMKLSHKVSQNNLYHAGADNTETRAK
RRTLERAHKNMHTRRDPINKDTGERTNIPQNRTVSYYCTCTSVEQQHQHQ
HALKASKHRKIELVSCSSAPSAEQPVPGGGRRVGKGRDSIPEGDGDETTR
LTEEESLSDSPSSGGGLDVATDDRTELLAKSRRSSFSLRKNDTKSGGRNG
RVSNGKGRTKEGASAGGEFDEHSGVRRRTLSCSPRHLLLGKAGCERRAGE
GYEYEMEPRVGGVVGRDLAWRTKALWYLGALLLVVGSLVNFASFGFAPQS
LLASLGSVQFISNVVFGKAILREIVTKRIIFGTATIILGNTLTLCFSPHQ
DDNYNTQQLKAFYDLDYNALLFFELAFALAMHATYKAFKTSKEMGKPKRY
SDLAMPLAYAICSAIVGTQSVIQAKCLSELLTMTFQGENQMSSPFTYLVI
TVWLGTTVFWLTRMNRALAMFHGLFIIPALQVKEGSGSVSA*
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mRNA from alignment at S-dermatodea_contig9424:5090..8567+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9424.17456.1 ID=mRNA_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3478bp|location=Sequence derived from alignment at S-dermatodea_contig9424:5090..8567+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTTCAGAAGTGGGCGATCGGCGCCATAATCAACATTTCCGGCTCCAT CGCGATTAACTTGGGCACCAACATTATGAAGCTATCCCACAAGGTCAGCC AAAACAATCTATATCATGCAGTCGTTGTTTCACATACATACATGGAGCTA TATACGGAGCTCCGGAAGTGAGTGTATCCTTACCTGTGTGCTGCTGTCTG TGCCATACTCTCTGCGTACTCCGGGCCCGTCAACCTCCGGTACGGCTGTG TGGCCCAGTCCCATCTGCCAGCGAGGTGGTACAGTACACGCTGGCTGTTG GCGCACCGGCCAGCACGAAGGGTTTTGGCTGTTTGCCCTTGCGATGATGG AACCATCCTCCCAACAACCGTTGTTATCTTGTGTCACTCACAAAGAGCTA CATAAATGCTTGTATGATACTAAATTAGATTATGAGAGATTTGCGTTCGA GTATCGTTTTCCACGTTGTACCTGCTGTCATACCAGTATACACACCTGTA TGCATGTACAGAGTATACGTAGATAATAATCTCGCGCGAGGCAGAGGTCG ATGTAGGGCTGGCTGCTGTACGCTGAGCGGTGGTTGGACAGCTATGGCGC ACATCGGTTCGATGCAGGCCATGTCAGCGGGCCGTCCTTCGTGGCGGAAA TATTTGGTGTCGGAAGGCACTCACTGCACTCACTGCAAGTAGCCCACCAT ACTTGTGCTCTTGCAAGGTTGCGATGCTTCTCTAGGCGTGTTCTGTGCCA GGCAGACCTGCATGCAGGGTGTCGTTGCCAGATGTCTAGAGTCAGTACTT GTATCGATCGTAGCATATTAATGCTTGAGCTTCTGCCTCATCGCGGTAGT CTGGTTTTGTATGGATTGCCGTCCAACAAAATGCAGGAGGGTATGTAGGA GGTGGAGCATGCATAGATGCAGCTCCGGGCAGGGTGCAGATAACACCGAG ACAAGAGCCAAGAGACGAACGCTGGAAAGAGCACATAAGAATATGCATAC ACGCAGAGACCCGATTAATAAAGATACTGGTGAACGCACGAACATACCAC AAAATCGTACTGTATCATATTACTGTACATGTACTGTTGTGTACATGAAC ATATTCATGCACCTCATACTGTATACTTGTACCATAGAGCTTTACATTAT GCTGTATATACACTTGCATATATATTCCAACACACCACACACGGTGTTCG TGCCCACACGCCAGATGGAAAAGGGAGAGCTGCCGCCGGGAACCTTCGGC TCTGGCCACGCACCCTCTGAAGCGGCGCAAAGCGACGTAGAAGTCGGCGC TGGCAGCAGTGAGAGTGTCGAGCAGCAGCACCAGCACCAGCACGCCCTCA AAGCCTCCAAGCACCGCAAAATCGAACTCGTCTCTTGTTCTTCTGCCCCG TCCGCGGAGCAGCCGGTACCGGGTGGAGGACGACGGGTGGGCAAAGGTAG GGATTCGATCCCCGAAGGCGACGGGGATGAGACAACGAGACTGACGGAAG AAGAATCCCTCTCGGACTCGCCGTCTTCAGGGGGAGGGTTAGACGTTGCT ACGGACGACAGAACGGAGCTCCTGGCCAAGTCGCGGCGCTCCTCGTTTTC CTTGAGAAAAAACGACACGAAGAGCGGCGGTCGAAATGGAAGGGTTTCTA ACGGGAAGGGCCGCACCAAAGAGGGGGCGTCGGCTGGGGGAGAGTTTGAC GAACACTCCGGCGTGCGGCGGAGAACGCTCAGCTGCAGCCCCCGGCACTT GTTGCTGGGCAAAGCTGGCTGCGAGAGACGGGCCGGGGAGGGGTATGAGT ACGAGATGGAACCGAGGGTGGGAGGGGTGGTCGGGAGGGACTTGGCGTGG AGAACGAAGGCGCTGTGGTACCTGGGGGCGCTGCTGCTGGTCGTCGGGAG CCTTGTAAATTTTGCGTCTTTTGGGTTCGCGCCGCAGAGCTTGCTAGCCA GTCTGGGTTCGGTGCAGTTCATCTCGAACGTCGTCTTCGGGAAGGTGAGG AGTCGACGCGACCACGGGTCTCTTCCGTGGGTTACGGCTGCGGATTGGTG TGCTGCCGCATGTTTTGTTCCGCGGGCTGGGCTTTGCAGCCGCGCCGGGC CTGAGATAGATGCGCTGTTCAGCTTTTGGGCGGGAAACCCAGGTCAGCCG TGCGAGTAAGCCGACACAGAGCACGCGCGTTATCTGCCAACAGCAAACCA GGGGGGCACAAGTTACGACACGTTGTTGTACATATTGGAGCGATGCGAAC GTGTGCCTTGCTCCTCCCGCGTCGCTATTCCTCGTTACGCCTGCGTGTTT CAGGCGATACTGCGCGAGATCGTTACGAAGAGAATCATCTTCGGGACCGC CACCATAATCCTGGGGAACACGCTCACGCTGTGCTTCAGCCCCCATCAGG TAGGGGGGGGCGGGGGGGAGGTTTCGGTGCAGTGAACCCTGCCACGCCCT TCGTCTGGTTTCGTGCCAACCGTTTTGATTTCGAAGAGACGCGGCTCTGG CCCGTGAATCGTACCCCTCGGACACGTAAATCATAGCTGCCGGCGAAACC GCACACGTCAGTATTTGGAGGCGTTATTTAACCCTGCGCGCGAGGCCGAT GTGTGCACCACGCGAAACCCATTTTTTGTTGTGCTATTTTTGAGCATCGC TCCGTGCGCGCGGTTGTTCGGCGTGGACAACCTGGAACTGGTGCAGGATG ACAACTACAACACGCAGCAGCTGAAGGCGTTTTACGACCTGGACTACAAC GCGCTCCTCTTTTTCGAGCTGGCTTTCGCGCTGGCTATGCACGCCACGTA CAAGGCGTTCAAGACCAGCAAGGAGATGGGGAAGCCCAAGCGCTACTCCG ACCTCGCAATGCCCCTCGCCTACGCCATCTGCTCCGCAATCGTCGGCACG CAGAGCGTCATCCAGGCGAAATGCTTGAGCGAGCTCCTGACCATGACGTT CCAAGGAGAGAATCAGATGGTGAGAACCGCCGACACTGCTGCCCCAAAAC TGTCAAAAGATGGTTCGCGTGGTGACGTTTCCCCCCGGACTGAAGACCCT CCGCGTTTTCGTGTTCGCCTTGGATGGGGTTTATTCTCATACTACGAAAG GTGTGTTCGTGTTACCCGCGAACCCGCCCTTGTACACTACGTACCCCCCG TTAGGAATCTGAACGCGTAACGCCTCGTTGACGAACTCCTCGAGTTTGGT CCGTTGTTGCAGTCTTCCAAAATGCGTCCATGTGTTTGTAACCCGCCGGA ATCCTTTCTCGGCACGTTTGCCGGCTGCCGTCTCCCCCGTCGCTTTTGCA CCCCGGTATCGTACGCGCGCGGCAGAGCTCCCCATTCACCTACCTAGTGA TCACGGTTTGGCTAGGCACTACCGTTTTCTGGCTCACGCGGATGAATCGC GCGCTGGCGATGTTCCACGGACTGTTCATCATCCCCGCATTGCAGGTGAA GGAAGGGTCAGGCTCGGTATCCGCCTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9424:5090..8567+

>mRNA_S-dermatodea_contig9424.17456.1 ID=mRNA_S-dermatodea_contig9424.17456.1|Name=mRNA_S-dermatodea_contig9424.17456.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2952bp|location=Sequence derived from alignment at S-dermatodea_contig9424:5090..8567+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTTCAGAAGTGGGCGATCGGCGCCATAATCAACATTTCCGGCTCCAT
CGCGATTAACTTGGGCACCAACATTATGAAGCTATCCCACAAGGTCAGCC
AAAACAATCTATATCATGCAATGGTTCAGAAGTGGGCGATCGGCGCCATA
ATCAACATTTCCGGCTCCATCGCGATTAACTTGGGCACCAACATTATGAA
GCTATCCCACAAGGTCAGCCAAAACAATCTATATCATGCAGGTGCAGATA
ACACCGAGACAAGAGCCAAGAGACGAACGCTGGAAAGAGCACATAAGAAT
ATGCATACACGCAGAGACCCGATTAATAAAGATACTGGTGAACGCACGAA
CATACCACAAAATCGTACTGTATCATATTACTGTACATGTACTGGTGCAG
ATAACACCGAGACAAGAGCCAAGAGACGAACGCTGGAAAGAGCACATAAG
AATATGCATACACGCAGAGACCCGATTAATAAAGATACTGGTGAACGCAC
GAACATACCACAAAATCGTACTGTATCATATTACTGTACATGTACTAGTG
TCGAGCAGCAGCACCAGCACCAGCACGCCCTCAAAGCCTCCAAGCACCGC
AAAATCGAACTCGTCTCTTGTTCTTCTGCCCCGTCCGCGGAGCAGCCGGT
ACCGGGTGGAGGACGACGGGTGGGCAAAGGTAGGGATTCGATCCCCGAAG
GCGACGGGGATGAGACAACGAGACTGACGGAAGAAGAATCCCTCTCGGAC
TCGCCGTCTTCAGGGGGAGGGTTAGACGTTGCTACGGACGACAGAACGGA
GCTCCTGGCCAAGTCGCGGCGCTCCTCGTTTTCCTTGAGAAAAAACGACA
CGAAGAGCGGCGGTCGAAATGGAAGGGTTTCTAACGGGAAGGGCCGCACC
AAAGAGGGGGCGTCGGCTGGGGGAGAGTTTGACGAACACTCCGGCGTGCG
GCGGAGAACGCTCAGCTGCAGCCCCCGGCACTTGTTGCTGGGCAAAGCTG
GCTGCGAGAGACGGGCCGGGGAGGGGTATGAGTACGAGATGGAACCGAGG
GTGGGAGGGGTGGTCGGGAGGGACTTGGCGTGGAGAACGAAGGCGCTGTG
GTACCTGGGGGCGCTGCTGCTGGTCGTCGGGAGCCTTGTAAATTTTGCGT
CTTTTGGGTTCGCGCCGCAGAGCTTGCTAGCCAGTCTGGGTTCGGTGCAG
TTCATCTCGAACGTCGTCTTCGGGAAGAGTGTCGAGCAGCAGCACCAGCA
CCAGCACGCCCTCAAAGCCTCCAAGCACCGCAAAATCGAACTCGTCTCTT
GTTCTTCTGCCCCGTCCGCGGAGCAGCCGGTACCGGGTGGAGGACGACGG
GTGGGCAAAGGTAGGGATTCGATCCCCGAAGGCGACGGGGATGAGACAAC
GAGACTGACGGAAGAAGAATCCCTCTCGGACTCGCCGTCTTCAGGGGGAG
GGTTAGACGTTGCTACGGACGACAGAACGGAGCTCCTGGCCAAGTCGCGG
CGCTCCTCGTTTTCCTTGAGAAAAAACGACACGAAGAGCGGCGGTCGAAA
TGGAAGGGTTTCTAACGGGAAGGGCCGCACCAAAGAGGGGGCGTCGGCTG
GGGGAGAGTTTGACGAACACTCCGGCGTGCGGCGGAGAACGCTCAGCTGC
AGCCCCCGGCACTTGTTGCTGGGCAAAGCTGGCTGCGAGAGACGGGCCGG
GGAGGGGTATGAGTACGAGATGGAACCGAGGGTGGGAGGGGTGGTCGGGA
GGGACTTGGCGTGGAGAACGAAGGCGCTGTGGTACCTGGGGGCGCTGCTG
CTGGTCGTCGGGAGCCTTGTAAATTTTGCGTCTTTTGGGTTCGCGCCGCA
GAGCTTGCTAGCCAGTCTGGGTTCGGTGCAGTTCATCTCGAACGTCGTCT
TCGGGAAGGCGATACTGCGCGAGATCGTTACGAAGAGAATCATCTTCGGG
ACCGCCACCATAATCCTGGGGAACACGCTCACGCTGTGCTTCAGCCCCCA
TCAGGCGATACTGCGCGAGATCGTTACGAAGAGAATCATCTTCGGGACCG
CCACCATAATCCTGGGGAACACGCTCACGCTGTGCTTCAGCCCCCATCAG
GATGACAACTACAACACGCAGCAGCTGAAGGCGTTTTACGACCTGGACTA
CAACGCGCTCCTCTTTTTCGAGCTGGCTTTCGCGCTGGCTATGCACGCCA
CGTACAAGGCGTTCAAGACCAGCAAGGAGATGGGGAAGCCCAAGCGCTAC
TCCGACCTCGCAATGCCCCTCGCCTACGCCATCTGCTCCGCAATCGTCGG
CACGCAGAGCGTCATCCAGGCGAAATGCTTGAGCGAGCTCCTGACCATGA
CGTTCCAAGGAGAGAATCAGATGGATGACAACTACAACACGCAGCAGCTG
AAGGCGTTTTACGACCTGGACTACAACGCGCTCCTCTTTTTCGAGCTGGC
TTTCGCGCTGGCTATGCACGCCACGTACAAGGCGTTCAAGACCAGCAAGG
AGATGGGGAAGCCCAAGCGCTACTCCGACCTCGCAATGCCCCTCGCCTAC
GCCATCTGCTCCGCAATCGTCGGCACGCAGAGCGTCATCCAGGCGAAATG
CTTGAGCGAGCTCCTGACCATGACGTTCCAAGGAGAGAATCAGATGAGCT
CCCCATTCACCTACCTAGTGATCACGGTTTGGCTAGGCACTACCGTTTTC
TGGCTCACGCGGATGAATCGCGCGCTGGCGATGTTCCACGGACTGTTCAT
CATCCCCGCATTGCAGGTGAAGGAAGGGTCAGGCTCGGTATCCGCCTAGA
GCTCCCCATTCACCTACCTAGTGATCACGGTTTGGCTAGGCACTACCGTT
TTCTGGCTCACGCGGATGAATCGCGCGCTGGCGATGTTCCACGGACTGTT
CATCATCCCCGCATTGCAGGTGAAGGAAGGGTCAGGCTCGGTATCCGCCT
AG
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