mRNA_S-dermatodea_contig9419.17450.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9419.17450.1
Unique NamemRNA_S-dermatodea_contig9419.17450.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: D7FN02_ECTSI (5\'-AMP-activated protein kinase subunit gamma-1 (AMPK gamma-1 chain) (AMPKg) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN02_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.250e-86
Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            +FLVT FREQ+RLFDDPI+ELRIGIFSDSVVTV+E A LS+VLDLLELH IGAVPIVD +GRVVGIYSRSDITFLATAADP  VL+NL+ KLSDILGQPGNEGLRDRLITCSP DTLQTVFEKFADFRFKRIV VDE++RCKGIISVSDLLAYFL
Sbjct:  191 EFLVTMFREQQRLFDDPIAELRIGIFSDSVVTVQEHACLSEVLDLLELHRIGAVPIVDADGRVVGIYSRSDITFLATAADPGGVLENLDRKLSDILGQPGNEGLRDRLITCSPQDTLQTVFEKFADFRFKRIVVVDEEARCKGIISVSDLLAYFL 345
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A836CIU9_9STRA (5'-AMP-activated protein kinase subunit gamma-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.930e-77
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            +FLV TFREQRRLFDDPI EL IG+F D+VVTV++ ARLS+VLDLLELH IGAVPIVD  GRVV IYSRSDITFLATAADP++VL+NL+ KL DIL QPGNE LRD L+TC+P+DTLQ++FEKFA+ +FKRIVCVD D RCKG+ISVSDLLAYFL
Sbjct:  153 EFLVNTFREQRRLFDDPIGELPIGVF-DNVVTVQQHARLSEVLDLLELHRIGAVPIVDAAGRVVNIYSRSDITFLATAADPDSVLRNLDAKLCDILAQPGNEVLRDSLVTCAPSDTLQSIFEKFAEVKFKRIVCVDADHRCKGLISVSDLLAYFL 306
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7S2SVN1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVN1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.370e-49
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGL-RDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYF 462
            ++LV  FREQRRLF+D I++L IG F + V+TVR+ A LS VLD +E   + AVP+VD   RVVG+YSRSDITFLATA D ++VL NL   L  IL Q   E + RDRL TCS + +LQ++FE+FA+  F R+VCVD++ RC GI+S  DL+ YF
Sbjct:  177 RYLVDNFREQRRLFEDSIADLGIGTFGEEVLTVRKTAVLSDVLDAMEARDVSAVPVVDESDRVVGLYSRSDITFLATATDADSVLSNLRVTLQQILEQKPTEDVPRDRLETCSVHASLQSIFERFAEVGFHRLVCVDDERRCLGIVSARDLILYF 331
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7S1BKI0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKI0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.750e-44
Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQP--------GNEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            + LVT FREQRRLFDD I +L IG +++ V+TV  +  LS+ L LL+ H + +VP+VD EGRV+ +YSRSDITFLATA+D +  ++NLN  L +IL Q          +    DRL TC+P+ TLQ++FE FA  +F R++  D+D RC G++S  DL+AYF+
Sbjct:  178 EHLVTHFREQRRLFDDTIYDLGIGTYNN-VITVCTNQSLSECLHLLQTHELSSVPVVDQEGRVINVYSRSDITFLATASDADDAIRNLNLTLGEILDQQREILTTQRADVSTPDRLHTCTPSHTLQSIFEYFAQLKFNRLIVTDDDHRCVGVVSARDLVAYFV 339
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7S2XY98_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY98_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.930e-44
Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 1 
Query:    4 FLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYF 462
            +LV+TFREQ+RLF+D ++ L IG + + +VTV+  ARL +VL +LE   I  VP+VD   RVV IY  SD TFLA A + EAV +NL   +SD+L     + + DRL TC   DTLQTVFE FA+ RF+ +VCVDE   C GIISV DLL+YF
Sbjct:  167 YLVSTFREQQRLFEDSVASLGIGTYQN-LVTVQHSARLREVLSVLEQFDIQTVPVVDEHNRVVNIYQHSDFTFLAQAENQEAVARNLEAVVSDVLNTRREQEMPDRLHTCLATDTLQTVFEMFAEVRFRTLVCVDEAFHCVGIISVHDLLSYF 318
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7S0GL11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GL11_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.840e-44
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDV-EGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            + LVT FREQRRLFDD I +L IG +   VVT+  +  L++ L L  +H + A+PIVDV  G V+ +YSRSDITFLATA D +  +QNLN  LS+IL +   +    DRL TCSP+ TLQ++FE FA  RF R++  DE  RC G+IS  DL+AYF+
Sbjct:  211 EHLVTHFREQRRLFDDTIYDLGIGTYGADVVTIDVNQTLAECLHLCHVHDLSAIPIVDVPNGSVINVYSRSDITFLATATDADDAIQNLNLTLSEILAEQRTDVTTPDRLHTCSPSHTLQSIFEYFAHHRFNRLIVTDERQRCMGVISARDLVAYFI 367
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A8J2WX77_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX77_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.920e-42
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            ++ V TFRE+RRLFD PI EL IG F D V+TV     L  VL LL    + +VP+VD  GR+V +Y+ SDITFLATA D ++V+ NL   + D++ Q  ++   + L TCS   TLQ VFE FAD +F+R++C+D D R  GIISV DLL+YF+
Sbjct:   30 EYFVATFREERRLFDQPIQELGIGTF-DEVMTVNTTTSLEDVLKLLCRRNLSSVPVVDKSGRIVSLYNHSDITFLATATDADSVVVNLGSSIEDVIAQRRSD---EPLHTCSQCATLQFVFEFFADVKFRRLICLDVDRRPVGIISVRDLLSYFV 180
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7R9WWZ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWZ1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.550e-41
Identity = 79/157 (50.32%), Postives = 104/157 (66.24%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEG-RVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            + LVT FRE RRLFDD I +LRIG + D++VTV     L+Q L+L+ LH +GA+P+VD E  +++G+YSRSDITFL  A D E  + NL+ +L DIL Q   +    D L TCS   TLQ +FE FA  RF R+  V+E  R  G++S  DL+AYFL
Sbjct:  212 EHLVTHFRENRRLFDDSIYDLRIGTYHDNLVTVGPTQTLAQALELMRLHNLGALPVVDAETQKIIGVYSRSDITFLTRATDAEDAVANLDLQLQDILQQQRTDVTTPDALHTCSTTHTLQAIFEYFAQLRFNRLYIVNEQDRLVGVVSAHDLVAYFL 368
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: A0A7S4JD72_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4JD72_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.870e-41
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            + LVT FREQRRLFDD   +L IG +   VVTV+    L++VL  L  +G+ AVP+VD  G+VVG+YSRSDITFLA A D E  + NL+  L  +L Q   +    D L TC+P  TLQ++FE FA ++F R+V VDE+ R  G+IS  DL+AYFL
Sbjct:  294 EHLVTHFREQRRLFDDTAYDLGIGTYDADVVTVQATQTLAEVLHTLHTNGLSAVPVVDSSGKVVGVYSRSDITFLAAATDAEDAVANLDVPLESLLAQRRTDVTTPDALHTCTPRHTLQSIFEYFAQWKFNRLVVVDEEERPVGVISARDLVAYFL 449
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BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Match: B7FUD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUD1_PHATC)

HSP 1 Score: 149 bits (377), Expect = 3.220e-41
Identity = 79/157 (50.32%), Postives = 105/157 (66.88%), Query Frame = 1 
Query:    1 QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHGIGAVPIVDV-EGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDLLAYFL 465
            + LVT FREQRRLFDD I +L+IG + DS+V+V  +  LS  L L++ H + A+P+VD    ++VG+YSRSDITFL  A D E  ++NL+  L+DIL Q   +    D L TCSP+ TLQ +FE FA  RF R+  VD + R  GI+S  DL+AYFL
Sbjct:  178 EHLVTHFREQRRLFDDSIVDLKIGTYGDSLVSVTPNQTLSDALGLMKKHKLSALPVVDAGTHKIVGVYSRSDITFLTKAIDAEDAVRNLDMPLADILSQTRQDVTTPDALRTCSPSHTLQAIFESFAQLRFHRLYVVDTEERLVGIVSARDLVAYFL 334
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9419.17450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN02_ECTSI1.250e-8687.105\'-AMP-activated protein kinase subunit gamma-1 (... [more]
A0A836CIU9_9STRA1.930e-7777.425'-AMP-activated protein kinase subunit gamma-1 n=... [more]
A0A7S2SVN1_9STRA3.370e-4955.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BKI0_9STRA2.750e-4449.08Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2XY98_9STRA2.930e-4453.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0GL11_9STRA3.840e-4452.23Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J2WX77_9STRA1.920e-4250.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9WWZ1_9STRA1.550e-4150.32Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4JD72_9STRA2.870e-4151.28Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]
B7FUD1_PHATC3.220e-4150.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9419contigS-dermatodea_contig9419:242..7502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.9
Seed ortholog evalue5.8e-69
Seed eggNOG ortholog2880.D7FN02
Preferred nameSNF4
KEGG koko:K07200
KEGG Pathwayko04068,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,map04068,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410
GOsGO:0000166,GO:0001302,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005737,GO:0005829,GO:0005886,GO:0006109,GO:0006111,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007031,GO:0007154,GO:0007165,GO:0007568,GO:0007569,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010675,GO:0010676,GO:0010906,GO:0010907,GO:0012505,GO:0016020,GO:0016043,GO:0016208,GO:0016310,GO:0017076,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0023052,GO:0030234,GO:0030295,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031588,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032147,GO:0032268,GO:0032270,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033674,GO:0035639,GO:0036094,GO:0036211,GO:0042325,GO:0042327,GO:0043085,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043539,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045722,GO:0045859,GO:0045860,GO:0045913,GO:0045937,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061695,GO:0062012,GO:0062013,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1902911,GO:1903506,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.cellular response to glucose starvation
EggNOG OGsCOG0517@1,KOG1764@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCBS domain
Ec32 orthologEc-25_002950.1
Exons4
Model size468
Cds size468
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9419.17450.1prot_S-dermatodea_contig9419.17450.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9419 242..7502 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925406.4329076-CDS-S-dermatodea_contig9419:241..3551622925406.4329076-CDS-S-dermatodea_contig9419:241..355Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 242..355 -
1694079912.2350261-CDS-S-dermatodea_contig9419:241..3551694079912.2350261-CDS-S-dermatodea_contig9419:241..355Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 242..355 -
1622925406.4455173-CDS-S-dermatodea_contig9419:1393..14891622925406.4455173-CDS-S-dermatodea_contig9419:1393..1489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 1394..1489 -
1694079912.2487721-CDS-S-dermatodea_contig9419:1393..14891694079912.2487721-CDS-S-dermatodea_contig9419:1393..1489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 1394..1489 -
1622925406.460519-CDS-S-dermatodea_contig9419:3242..33521622925406.460519-CDS-S-dermatodea_contig9419:3242..3352Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 3243..3352 -
1694079912.2644203-CDS-S-dermatodea_contig9419:3242..33521694079912.2644203-CDS-S-dermatodea_contig9419:3242..3352Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 3243..3352 -
1622925406.4713824-CDS-S-dermatodea_contig9419:7354..75021622925406.4713824-CDS-S-dermatodea_contig9419:7354..7502Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 7355..7502 -
1694079912.276131-CDS-S-dermatodea_contig9419:7354..75021694079912.276131-CDS-S-dermatodea_contig9419:7354..7502Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9419 7355..7502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9419.17450.1

>prot_S-dermatodea_contig9419.17450.1 ID=prot_S-dermatodea_contig9419.17450.1|Name=mRNA_S-dermatodea_contig9419.17450.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=156bp
QFLVTTFREQRRLFDDPISELRIGIFSDSVVTVREDARLSQVLDLLELHG
IGAVPIVDVEGRVVGIYSRSDITFLATAADPEAVLQNLNCKLSDILGQPG
NEGLRDRLITCSPNDTLQTVFEKFADFRFKRIVCVDEDSRCKGIISVSDL
LAYFL*
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mRNA from alignment at S-dermatodea_contig9419:242..7502-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9419.17450.1 ID=mRNA_S-dermatodea_contig9419.17450.1|Name=mRNA_S-dermatodea_contig9419.17450.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7261bp|location=Sequence derived from alignment at S-dermatodea_contig9419:242..7502- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCCTGGTGACGACGTTTCGGGAACAGCGACGTCTTTTCGACGACCC
AATCTCGGAGCTGCGGATAGGGATCTTTTCGGACAGCGTGGTGACGGTGC
GCGAGGATGCCCGCCTGTCTCAGGTTCTCGATCTTCTCGAGCTCCACGGT
GCGTGTCCCCCTTTTTGGAATTTCGCTGCCTTAGGGCTTTTACCGTTCAT
AGCGTCGTCGTAAAGACTAACCAACTTTTACTTTATCCTTCCTGCACTTG
GCAGGCGTAGCGTCAGCCCCCATATCATACGTTGCCTGGTATTGTAATCC
TGGTTTTTGGCCCAGTTCTAAAAAAACTATTACGGAGGAACGTAGTTAAC
AGGTCCAAATCTCATGGCCAATAATACCCAACTATTCCGACCATTATTAC
CCAAACAACAAAAATATCATGAAAAACAAAACAAAAGAACGAGATATGGC
CATATTCAAGAATTTCGACCTTGAAATATCGATAATTCCGGCCTATTTTC
GTTTTTCTAGGTTGAGACTTGTGGCAAATTTTGGACCTGTTAACTATGGT
ATAGTCCTCCGTAATAGTATGGTACTGTAGTATATTTACCAGTAATACGA
TCCACGGTAATTTTCTTTTTTCGAGGCTCCTGTGTGCCCGGGAGGGACCC
TTTGTGTTTTTCACGTCGGGCGGTCACCGAGACCGAGGGGGAGCTACTCA
TCGCCGCAGTGGCGGCAGACAGCGGGATAAAGAGGTTAGCATCGAGCGTG
CCACATCAAGTCTTGATGGCACAGTATAATATTATAAGGTGCACAGTAGT
CAAGTAATCAGACCCCAACATCATGACCATGAATACAATACCCAACTAGT
CTATTCCGACCATACCATGATTTTAATACCATACCCAAACGACGATAACC
TCACGAAAAAAGATAAAAAGCGCGAGATATGGCCGTACACAAGAACATGG
ACGTTGAAGTATCGATAATTCCAACCTATTTTGATTTTTCTAGGTTGAGA
TTTGTGTAATAGCAAATTTGGACCTGTTGACTAGGGTATGGTATAGTCCC
CCGTAATAGTCATAGTAATAGTAATAGTAATAGTAATAGTAATAGTAATA
GTAATAGTAATAGTAATAGTAATAGTAATAGTAATAGTAATAGTAATAGT
AATAGTAATAGTACGTGTAGGAGCTATTGTATGTACGTGGAGCGGGAAGT
CGGCGTATACTTGAAGTATCATTTTTACAGGTACACTATAGATAACAAAT
ATTGCTAAGGAGGCAGGCATTCGTTAACCCTTTTGGTACTGTTATAGCCC
ACTGTTTGGAGCGCCGGTTAGCACGTAATGAGGCGTACTTGAAGCGGAAC
CCCGGGTAACCCCATGGGTTATGACGCAGGAATGGGAGAGAGAGAACGGA
ACCCAAGGGAAGCGGGGCTGTAGCTGTCGACTGCAATCGATATACAGTTT
CTGGTCGTTTCGGAGAGCCCTGTTAATACTAATATAATACTATAATATAA
TAGTGTTAAAGTACCACAAGGGTTAATGCCAGTTGGATGTTGCAGACTCA
TTGGTGCGATGGTTGTGTGTGAGGGAGGGAGGGAGGGAGGGAGGAAGCCT
TCAGGGAAGGTTGTCTTTTCGACTGCATTTGCGAATGCAGTCTCCAAGTA
ACGTTGACCCTCGTGATGCACGCCGCGTCGCCCTCGGTATCTCCGTCCAG
CCCCCATCGACACCCAAAAGTTATCGACACATCGACACGCTCGCCGCGTT
TAGCTCGCATGCATGGTGGTGCACTTCTGCGTGTAAGCACGTCGCCGCGA
TGTACAGTATATACAGTACCGGCCCGCTCATAAGAAACTGAAAATCAGGC
TGTGCCTGAGTTTCTTAGATGGGGCGAACACTATTATATAGGGTTTAGTG
TAACACTTGGCGCTGAGGCTCCACCTTTCTTGCTGTTTTCAAAAAGCGCA
GCCTGATTTTTTTACAAGCGCGTTTCTTATGATATGAGCGGGCCGGTCCT
GTAGTATAGAGTATGCAGTATACAGTGTACAGTATATAGTATACATATAT
ACAAGGGCTTCGCCGGAGGGGGCTAGCGGCCCCCTCGGCTCCGCGCAAGG
CAATCGAAGATAGCGTGTGTTCGACGTCGAGGTTCGGTATCCAAGGCGCG
AAAACGTGCTTCCTTCCAAAAATAAATGATTTCAATATACTTGATAGTAT
AGAGAGGTCTCTCTCATAGTATGGCGTTGGAAAGCGAGACTCTTAAAAAC
AGCTCCAAGATGTATATATCCAGAGGCCAAAGGAGGAGAGGATGCATATA
AGTACATACTTGACTCCGTAGCGTTGTCCTCGCATCAGTCTTTGGCGCGT
GGATTCGGTGAGGACGGAGTACGACCGCCGACGAGCGAGGTGCGATGGCT
GGACCCCGTTGCGCGAGAAAACCGAAGGCAAGAATCGGGAGGCATATAGG
TTTAGAAGAGCACTTTGTTATCCTGGCATGGACAACATCAACTGGAGGAC
TGGCTTGACAGGGCTACGGAGGGGACAGCCCGGATGTTGGGCTGACGGTC
GAGGGGGTGGCTGGTGCACCAATGCTCAAGTGGTAAGACCTGGCTGGCGC
GACAACGAGCAAGACCAAGGCCGACGTCGCCGAGCAAGGGACGGAGCTTG
TTTTTCTTCGTTTTTCCTGGGAAGTAAATTTTATGACGTCATCATGCCAA
ACCCAACAAATAGCAGGACGGAGTTCGGAAAACGCAGGATTCCGAAATAC
TGCGTTATCCGAGCCCTCAGGATCGAACAAGCAACTTGCGAAATTTCGTT
TCTAGGCGGAAAGAGCCTCCTGAACGCTAGCTTCGAGTAAGGTTTTATTT
TATTTTCAATTGCCACAGCACGGAGGCCTGAGAGCGCAGTATTCCCATAT
GCCTGCATTTTCCGAAACCCCGAAGCTCGATATATATTATGGATAGGTTT
ACATAGTATATAGCGATATCATCATATACCCTTAGTGAAGACGTTCGACG
CTAAACGACCTCAGCCCCCCCGGTGGCGTCGCAAACGCAAGGATGGTGGC
TAGCAGCTGGTATCATCCTTGTGAAACGCAGCCTAGCCGGTGAAAACCAG
GCATACCGCTCCGTCTCGGCATTGGTTGGGCGCGTGGTCTACGTCCGTTT
GGATACGACACGCGTTTTTAACATAAGTACCCCCTAAAAAAATAAGGAAT
TCAAAAAAATAGAGCGAGCGTTGGGGTCCCACCTTTTCAAGAGGGAAGAT
GGTCCAGTCCAAGCTACACCTATGGAGGCTAGGCTCACTTGTTGCATATG
ATGCTATGGTGTCGCATCGTGTATTATGTTACATGGTTATGTTCTCATAC
AGGACATGAGTCTTTGTCCTGAACTATATCCTGGTGATGTATCTTTGCTT
GCGTTTTTATGGGCTTATCATATTAAATTTCCCCCCCCTCCCAAGCCCCC
CCCCCCCCCCCAAATTGTTTACTGATTAAAAGGACATAAAGTGAGCGCTG
GGGTCCTCCAACCTTTGTGAAGGGAGGAGAGATGGTCCAAGCTGTTATAC
ACACCTATGTTATACACACTTATGTTATACACACCTATGTTTTACACACC
TACGGAGGCTTCCGTTATGTACGATATGATGCTATGGTTTTATGTCGTGT
ATGGTATGATGCTTTGGGATCGCTCACGGCACAAGTGTCTTTTGTCCTAT
TAATTATGAATAGGCGATTTCCTGGTATCAATTAATAGGATAACTTTGAT
GTGCTTTGTGAGCCGAATACTTGCTCCGACTACACCCCCCCCCCCGTGGC
CCCCTCAGCAAAGAGGCGAGAAGTGATGTAGACAGGATAGGAAAACATTT
TAGCGCCACCTTTGACAGAGTAGGAAAGAACGATTGGCGAGCGATCGATT
GATCCTGTGAGAACATATCAATGCTCCGTCCTACCTCTCGAGGACGCGTG
GTCAAGGATAGGCCTAACAGCTAAGGCATGCAAAACATGAGTAACCCCCG
GCCGCCCGCCCCCCCGCCGCCCACCCCCCCCCTACCCTCGGGCGAGCGTG
GGGAAAGAAAAGAAAGAACACCAAAACACAGAAAAACACCCCACCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCACCACCACCACCACCACCACCACCCAG
GTATTGGAGCGGTTCCTATCGTGGACGTGGAGGGGCGAGTAGTGGGGATA
TACAGCCGATCGGATATCACTTTTTTGGCGACAGCGGCGGACCCAGAAGC
AGTGCTTCAGGTGAGCATGGCCCCCTTTTTTCTCGCCTAACGAATGGTAA
TGGCATGTGCCACGGCAGGGCACCCCATCGCGCGCGCTGTTTTTTGCCCC
GATGCTTGGGCCGTTTCGCTCAAGGTGCGTTTCCGCCAGCGAGCGCGCCC
GGCCCCCCGCTGTGGCTGCTATCTTTGAAGGTGTTTTCAACTCTATTTCC
TAGTACACGATTTGGAGGCCGATAGTGTACACTAAACTCCTATACGGTTG
TTGAGGCCGATTTTGTACACTAAAATCCTATTATATTTCGGAGGACCATA
GTAAACAGGTCCAAATTCGTCACAAAAATCTTACCTTAGCACAAACAAAA
TAGGCCGAAACGACTGGGTATTCACGGTCAGTGTTTGTCTCATAGGGTAG
GCCAGGCCTCGTGTTCTTTTTTGGTTGGTGAGGTGGGTTTGGTGTTGTGT
GGGTGTTCATGGTCGGAACAGTGGCGTGTTTATGGTCGTGAGATTTGGTC
CTGATTACTTGATTATAGTGTACCTCCGCAATATGCGATTTTGAGGCCGG
TTTTGTACACTAAAATACTGCACGATTTTGAGGCCAAAACAACTTGATGT
TTGTGTTAAAGAGTGTAGGAGTTTTCACCTCACCGTGAGGGGCGGAGCCT
TGTCTACCTACTACTTTAGTGTATTACTGTAATACATATGGTAAGTCAAT
GTCGCGATGTGCCCTGGGATCGGGGTGTGCTGTTGTTTTTCCTGCGTCAA
AAGCACCCTATGGAAGCTCACATGTTACTTATGATGCTCTTGGTGTCATG
CTGGTCATATTCCCGTGGAAAACGACAACGTATTATAGAATATGACTATC
GCACAACATTCTAGTTTTCATGGAAATGCCCTGAGATGCGCTCGGCTCCA
GCCGTTTGTTGTTTTTTATGACGATAACAAATGATGTACAGTAGTTACCG
TGGGTGTGCTGTACTGGCTGTGATGCGCGTTTTGCCCCCGCCATATGTCC
TGGCAGAAGAATGCGTGAGCAATCGGAAGATAGGGGGGCTAGGCTGAGTA
GGATTCTTTGGCCGGACAGGCACGATAATGATGTTGCATTCCGGAACGTA
TTGAGTGCGACCTTCTAAACCTCGGAACGGGATAATCTGAGATGGGCTGG
CCAATCACGCGCGAGGCGCGAGCACAGGAAAAATGGAAAAACGCGCCTCT
CTAAAATATCTCCTGCGCGACAGACAAAACAAAGACGATTTTTCTTACCT
TACCCCCCCCCCTTTATCTTTGGATTATTATACTACTAATATTACTATCC
TAATACTATGTTTATACTATTACTCGACTATTACTCTACTATTACTATAC
TATTAATAGTTCTCTACTGTTGCTCTACTCGCGTATCAGGCGGGAAACGT
CAAGGTGCAGAGTTGGTTGCACTGCGGTCGGTGACGAGTAGTCGAAAGTC
GAAACGGACGCTCGTTCCGCCGCATTTTGTTTTTTATTTCGAGTTCTTGC
GATGCGCTTGTTTTTCTGGACCGTGGCTCCCCCCCCCCCCTAAAAATATA
ATGATGTGTATAACATATAGCGAGCGTTGGGGTCCCACCTGTTCAACAGG
GAAGACGGACCAAGCTACACCTATGGAGGCTAGGCTCACTTGTTACATAC
CAGTATGATGCTATGGTGTCTAATTATGTGGTATGCTGTTAGATGGTTAT
GGTATCATACAGGACACCCCCTCCCCCCCCCCCCCCTCTCCCCAATCCTC
CTGGCGGCGGCAGAACCTGAACTGTAAGCTGAGCGACATTTTGGGGCAGC
CGGGGAACGAGGGTCTGAGGGATCGACTAATCACGTGCTCACCAAATGAC
ACATTGCAGGTGATATTTGATTTGCTTTCGAAGGTTGCGGTACAGGCGTT
TTGTATTATTGACTGCATGGTTTTTTGTTTTTTGTTTCTTAATGACACTT
TTAAACGACCTCTGCCCCGCCAAAATGGTAGCCGATCCGATCTCGCTCGT
GATTTGTCATATGAGAACTATCGAGAAATGGGAAAAAAGTACGACAACCT
TAGTATAACTTGCGTTTTTAATACTTGATAAATAAGTAACATGCGTGTGG
GTTGTAGTATGGGCAGAACCCACTCCCCGGGCAGAACCCGAAGTGTAAGG
CGATGCCATAGGCGACCGAATTATTTATTTGTGATGGGTGGCGTGGAGTA
CACACCGAGGTGGGGTCTTGGATTACGACCCTGAGAATATAAATAAAAGG
AGAGCATGACTTTTCATGTTGGGGTCTCAGAGCAAAATGCTCCAGCCGAA
GCTCACGCAGAGCGAGGCGCGCCCACCCCCCATGCTCTCACTCCCTCATC
GACACCTCTGAACTGCTCCCAGTTCATCGTTATCAGATTTTCTTGGCCCG
AAGCGCGACCTTTCAATCAAGTATGTCCAACTCATGATTCTTCAGCCGCA
CCAGCGCGTGCAAGCACGGCAGTCTAGCCGCTGCCAGCGCCAGCCTCCGC
TGCTGCCTCCGCGGGTACAGGCACAGGCACCTGCATATCTCAATAGTTAT
TATAAATGTTAATTTATGTTCGTTTATGTTCTTTTATGTTAGTTTATGTT
AGTTTTTCGTTGACGTTGCAGGTCGGAAGAGTAAGATTTTCAGACGTTGG
AAGGCCAGACGAGACTGATTTGTGACGTATCATGTTGGGTATAGTACACT
GTTTGGCATATTTGGTCCTGATTTGCCATCGTACTACTCTGTACCTCTCT
AATAGTAATAGTTGTGGAACAGGATTAGGTTATACTATTAATAATACTAT
TAGTCATATTTATATTTGTTCCTACGCGCGCACTTTCCTGCCCCGGTGTG
CCGCCCGACGATGTCGCCGTTTCCTGCTTTTTCCCTCCTCCCTGCAGACG
GTCTTCGAGAAGTTTGCCGACTTTCGGTTTAAGCGAATCGTGTGCGTGGA
TGAGGACTCTCGATGCAAAGGCATTATCTCCGTCAGTGATCTACTGGCCT
ACTTCCTGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig9419:242..7502-

>mRNA_S-dermatodea_contig9419.17450.1 ID=mRNA_S-dermatodea_contig9419.17450.1|Name=mRNA_S-dermatodea_contig9419.17450.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at S-dermatodea_contig9419:242..7502- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCCTGGTGACGACGTTTCGGGAACAGCGACGTCTTTTCGACGACCC
AATCTCGGAGCTGCGGATAGGGATCTTTTCGGACAGCGTGGTGACGGTGC
GCGAGGATGCCCGCCTGTCTCAGGTTCTCGATCTTCTCGAGCTCCACGCA
GTTCCTGGTGACGACGTTTCGGGAACAGCGACGTCTTTTCGACGACCCAA
TCTCGGAGCTGCGGATAGGGATCTTTTCGGACAGCGTGGTGACGGTGCGC
GAGGATGCCCGCCTGTCTCAGGTTCTCGATCTTCTCGAGCTCCACGGTAT
TGGAGCGGTTCCTATCGTGGACGTGGAGGGGCGAGTAGTGGGGATATACA
GCCGATCGGATATCACTTTTTTGGCGACAGCGGCGGACCCAGAAGCAGTG
CTTCAGGTATTGGAGCGGTTCCTATCGTGGACGTGGAGGGGCGAGTAGTG
GGGATATACAGCCGATCGGATATCACTTTTTTGGCGACAGCGGCGGACCC
AGAAGCAGTGCTTCAGAACCTGAACTGTAAGCTGAGCGACATTTTGGGGC
AGCCGGGGAACGAGGGTCTGAGGGATCGACTAATCACGTGCTCACCAAAT
GACACATTGCAGAACCTGAACTGTAAGCTGAGCGACATTTTGGGGCAGCC
GGGGAACGAGGGTCTGAGGGATCGACTAATCACGTGCTCACCAAATGACA
CATTGCAGACGGTCTTCGAGAAGTTTGCCGACTTTCGGTTTAAGCGAATC
GTGTGCGTGGATGAGGACTCTCGATGCAAAGGCATTATCTCCGTCAGTGA
TCTACTGGCCTACTTCCTGTGAACGGTCTTCGAGAAGTTTGCCGACTTTC
GGTTTAAGCGAATCGTGTGCGTGGATGAGGACTCTCGATGCAAAGGCATT
ATCTCCGTCAGTGATCTACTGGCCTACTTCCTGTGA
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