mRNA_S-dermatodea_contig94.17436.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 4.670e-138 Identity = 323/765 (42.22%), Postives = 373/765 (48.76%), Query Frame = 2
Query: 158 KLPSGEPISAAFLSTVL---------PCGVIAPVVGFRVDEDSVIEGRHSTTFRLLLDRQWRQPPARDGGREEEPRADGDDVVAAAQLAHMSVFVKRMICKELPPRSLSKWRTSIASYRAEATFVKKLSSAKTLDGIAPDTFWVHVDDRLGYYPYAPPSLPLPPGGRGEGSAVEAAGGAGE--------MMESCFMMITEDLGAEPAIICSSETSGGIFSPGDASAKRH-DGRIR-TEASSWEQVGAVDLERAKLALSSAARLHASFWANLSPPPSQTANRIGEQSSNRNGTPTSASEPTVSVSADTAMHQSVGNPSVGVSTGKEGVGGXXXXXXXXATAMETQATAAAPAPAAMEVKERQGSDPRVRVEENDARPQSG-GIHGTRVGGRYARGLHEQGTFWSLEKRDPGDLPGLEEEYGKLLRRFRTLLPGAWFEEEQENGGSGSGPSR-------GREAALGRRLTARARELDAAAHDSEVTAAAQGEG---SGGRAEWEKRGSGRGRTLVHGDLKTWNVFF-SKDRAEATATIAGAAA-ARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNSERDLLEHYHAELVAGLENRVRSPGNPEAAATRAGSDSPSPCDASASITFAGARRAEALEGRVEESGADVQPPGLGASLAENGARATSAGGEVAVSPLYPWEQFVDDYRVAFLDYMRCVVGTLWKGLSPEKLEKNRATGPGMSLINRSLDHVRWMIEKATRLLDELDELEGDK 2356
K+PSG+ IS +L++VL A + F+VDE S I+GRHS TFRLLLD + A D G A G V + A SVFVKRM C+ELP RSL+KWRTSIASYRAEATF + ++ LD I P FWVHVDDRLG GG G+A A G E + ESCFMMITEDLG + PG R D R + + WEQVGA+D RAK LS+AA LHASFW PPP+ GG + + Q E P G G H RYARGLH+QGTFWSLEKRD GDL GLEEEY KL+R FR LLP AWFE Q+ G + +R G E LGRRL ARA LDAA H A G+G S G G RGR+LVHGDLKTWNVFF + AE GAAA G DA P+ AR VK IDWQWCGEGLAA D AY+ICTS+E S L+ ER+LL+HYHAEL GLE R P PE GG + YP QF DDYRVAFLDYMRCVV TLWKGL+PEK+++NR++GPGMSLINRS H++WMIE+ATRLLDELD LE +K
Sbjct: 10 KVPSGDLISVEWLNSVLLQKQQQQHNSGSTQATITRFKVDEGSTIKGRHSVTFRLLLDWSSSRVEAADDGN-----ATGRGRVCSGPWA--SVFVKRMTCRELPARSLTKWRTSIASYRAEATFFETVAGYAALDAIVPHAFWVHVDDRLG-------------GGEETGTAAAAGTGGTEADATIVEALRESCFMMITEDLGT-------------VSHPGCGENDREADAESRGPKKADWEQVGALDPGRAKAVLSAAAHLHASFWPE--PPPA--------------------------------------------------AGGWEPRGHCQPQSPQRQ---------------------EDHGREQQRHPDLGSGHHHCDGEWRYARGLHKQGTFWSLEKRDAGDLAGLEEEYRKLMRNFRPLLPAAWFEAPQQGGDAVGDAARRPELCAEGDERHLGRRLAARALSLDAAVH-------ANGDGVLASSG-------GGKRGRSLVHGDLKTWNVFFKTAGWAEPGGQGEGAAARGDGGGDAKGPAAAARR-NVKIIDWQWCGEGLAAADAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPPAPE-------------------------------------------------------------GGGDSDGAWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSPRHMQWMIERATRLLDELDSLEKEK 592
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI) HSP 1 Score: 311 bits (798), Expect = 1.140e-91 Identity = 229/545 (42.02%), Postives = 258/545 (47.34%), Query Frame = 2
Query: 803 IRTEASSWEQ--VGAVDLERAKLALSSAARLHASFWANLSPPPSQTANRIGEQSSNRNGTPTSASEPTVSVSADTAMHQSVGNPSVGVSTGKEGVGGXXXXXXXXATAMETQATAAAPAPAAMEVKERQGSDPRVRVEENDARPQSGGIHGTRVGGRYARGLHEQGTFWSLEKRDPGDLPGLEEEYGKLLRRFRTLLPGAWFEEEQENGGSGSGPSR-------GREAALGRRLTARARELDAAAHDSEVTAAAQGEG---SGGRAEWEKRGSGRGRTLVHGDLKTWNVFFSKDR-AEATATIAGAAAARGSN-DAPPPSPTARSGRVKFIDWQ-------------WCGEGLAATDVAYMICTSVEVSALNSERDLLEHYHAELVAGLENRVRSPGNPEAAATRAGSDSPSPCDASASITFAGARRAEALEGRVEESGADVQPPGLGASLAENGARATSAGGEVAVSPLYPWEQFVDDYRVAFLDYMRCVVGTLWKGLSPEKLEKNRATGPGMSLINRSLDHVRWMIEKATRLLDELDELEGDK 2356
+R A W Q VGA+DL RAK LS+AA LHASFW P P P + + H +P RQ R + D P G H GGRYARGLH+QGTFWSLEKRD GDL GLEEEY KLL FR LLP AWFE + G + +R E LGRRL ARA LDAA H A G+G S G G RGR+LVHGDLKTWNVFF AEA GAAA G DA P+ A G+VK IDWQ WCGEGLAATD AY+ICTS+E S L+ ER+LL+HYHAEL GLE R P PE GG + YP QF DDYRVAFLDYMRCVV TLWKGL+PEK+++NR++GPGMSLINRS H++WMIEKATRLLDELD LE DK
Sbjct: 78 LRNTAGQWPQLKVGALDLGRAKAVLSAAAHLHASFW----PEP-----------------------PAAAAGWEPRRHSQPQSPK------------------------------------------RQEDHGREQQRHPDLGP---GHHHCDGGGRYARGLHKQGTFWSLEKRDAGDLAGLEEEYQKLLGNFRPLLPAAWFESPHQGGDAVGDAARHPGVCAGADERHLGRRLAARALSLDAAVH-------ANGDGVLASSG-------GGKRGRSLVHGDLKTWNVFFKTGGWAEAGEQGEGAAARDGGGVDAQGPA-AAAGGKVKIIDWQVWFVLEVGVVTNEWCGEGLAATDAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPSAPE-------------------------------------------------------------GGGGSDGAWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSARHMQWMIEKATRLLDELDSLEEDK 474
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: D8LDB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB7_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 2.600e-18 Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 2
Query: 422 MICKELPPRSLSKWRTSIASYRAEATFVKKLSSAKTLDGIAPDTFWVHVDDRLGYYPYAPPSLPLPPGGRGEGSAVEAAG-GAGE--------MMESCFMMIT-EDLG 715
M C+ELP RSL+KWRTSIASYRAEATF K ++ + LD I P FWV+VDDRLG GG G+A AAG G E + ESCFMMIT ++LG
Sbjct: 1 MTCRELPARSLTKWRTSIASYRAEATFFKTVAGSAALDAIVPHAFWVYVDDRLG-------------GGEETGTAAAAAGTGDTEADAAVVEALRESCFMMITGQELG 95
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A5J4XP26_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XP26_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 2.550e-11 Identity = 69/221 (31.22%), Postives = 97/221 (43.89%), Query Frame = 2
Query: 1271 ARGLHE-QGTFWSLEKRDPGDLPGLEEEYGKLLRRFRTLLPGAWFEEEQENGGSGSGPSRGREAALGRRLTARA----RELDAAAHDSEVTAAAQGEGSGGRAEWEKRGSGRGRTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSAL-NSERDLLEHYHAELVAGLENRVRSPGN 1915
A GL+ QG +WSLEKR DL G+ ++ K F P + + + AL RL A A +EL + D+ V A+W RT++HGD KT N+FFS TA A A+A P V D+QWCG GL TDV Y++ TSV+ L + E +LL Y++ L+ L+ + G+
Sbjct: 21 ALGLNSAQGCYWSLEKRQ-SDLAGMPRQWAKTCSAFEIDFPETFAKASVQ--------------ALAERLLAVATAVHQELSLDSTDTSV------------AQW--------RTIIHGDFKTANLFFSP-----TAEAASASA---------PQHGGEPAMVSACDFQWCGGGLGVTDVMYLLWTSVQPQVLFDQEEELLRCYYSSLMHQLQEQHHIDGS 192
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A7S3C5E1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C5E1_9VIRI) HSP 1 Score: 73.6 bits (179), Expect = 2.830e-10 Identity = 72/256 (28.12%), Postives = 93/256 (36.33%), Query Frame = 2
Query: 1580 GSGRG-RTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNS----ERDLLEHYHAELVAGLENRVRSPGNPEAAATRAGSDSPSPCDASASITFAGARRAEALEGRVEESGADVQPPGLGASLAENGARATSAGGEVAVSPLYPWEQFVDDYRVAFLDYMRCVVGTLWKGL--SPEKLEKNRATGPGMSLINRSLDHVRWMIEKATRLL 2326
G G G +TLVHGD K+ N+FF + P A +V +ID QW G GLAATDVA+ I +++ L++ E LL+HYHA LVA L V G PEA A R L P E Y A LD R V W + SP L KN A G + N+S+DH W++ + +L
Sbjct: 117 GCGEGAKTLVHGDPKSANIFFRQG----------------------PGSAADDVQVGYIDMQWSGFGLAATDVAHHIVAGLDIECLSADGCKEEALLDHYHASLVAQL---VELGGFPEAQAAR----------------------------------------------------------------LLPRETLQAQYEAAVLDMCRVVFAYQWARVKASPATLAKN-APSMGRNSYNKSVDHACWLVRQCDNML 282
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A7S3TKA6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TKA6_EMIHU) HSP 1 Score: 71.6 bits (174), Expect = 6.360e-9 Identity = 55/155 (35.48%), Postives = 71/155 (45.81%), Query Frame = 2
Query: 1463 LGRRLTARARELDAAAHDSEVTAAAQGEGSGGRAEWEKRGSGRGRTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNSERDLLEHYHAELVAGLENRVRSPGNPEAA 1927
LG+RL AR+ A +H + AA G G+GG A + R RTL+HGD K N+ + G V FID+QW G GLAATDVA+ +C + AL E LL+HYHA L+A +P P A
Sbjct: 486 LGQRLQRVARDAAAESHPFDDVAAGAG-GAGGNA------ARRFRTLIHGDPKAANLLLHE-----------------------------GGAVGFIDFQWTGWGLAATDVAHHVCAAFAPDALAQEGALLDHYHASLLAAAAEFGGAPSLPSRA 604
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: R1DR41_EMIHU (APH domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DR41_EMIHU) HSP 1 Score: 71.6 bits (174), Expect = 6.590e-9 Identity = 55/155 (35.48%), Postives = 71/155 (45.81%), Query Frame = 2
Query: 1463 LGRRLTARARELDAAAHDSEVTAAAQGEGSGGRAEWEKRGSGRGRTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNSERDLLEHYHAELVAGLENRVRSPGNPEAA 1927
LG+RL AR+ A +H + AA G G+GG A + R RTL+HGD K N+ + G V FID+QW G GLAATDVA+ +C + AL E LL+HYHA L+A +P P A
Sbjct: 519 LGQRLQRVARDAAAESHPFDDVAAGAG-GAGGNA------ARRFRTLIHGDPKAANLLLHE-----------------------------GGAVGFIDFQWTGWGLAATDVAHHVCAAFAPDALAQEGALLDHYHASLLAAAAEFGGAPSLPSRA 637
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A7S2F1X9_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F1X9_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 2.930e-7 Identity = 80/297 (26.94%), Postives = 108/297 (36.36%), Query Frame = 2
Query: 1457 AALGRRLTARARELDAAAHDSEVTAAAQGEGSGGRAEWEKRGSGRG-RTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNS----ERDLLEHYHAELVAGLENRVRSPGNPEAAATRAGSDSPSPCDASASITFAGARRAEALEGRVEESGADVQPPGLGASLAENGARATSAGGEVAVSPLYPWEQFVDDYRVAFLDYMRCVVGTLWKGL--SPEKLEKNRATGPGMSLINRSLDHVRWMIEKATRLL 2326
A +G RL A E+ A AH T G+G G + L+HGD K NVFF R E T+ V FID+QWCG GLAATDVA+ I ++ + L++ E LL+HYH L +E+ VR GA+ + AR L P + Y A LD RCV W + SP L NR + G + N+S+DH W++ +A +L
Sbjct: 45 ATIGERLQRIAAEVGAEAHPFGST-----------------GNGVGCKCLIHGDPKQGNVFF---RDEDDGTVG----------------------VGFIDFQWCGFGLAATDVAHHIVAALRIECLSADGSKEEALLDHYHTCL---MESFVR----------------------------------------------------YGAADNIDEARL-----------LLPRDVLSQQYESAVLDMCRCVFAYQWARVKASPTTLAANRKS-LGRNSYNKSVDHACWLVRQADNML 232
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A662X3W2_9STRA (CHK domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3W2_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.260e-6 Identity = 58/200 (29.00%), Postives = 81/200 (40.50%), Query Frame = 2
Query: 1298 FWSLEKRDPGDLPGLEEEYGKLLRRFRTLLPGAWFEEEQENGGSGSGPSRGREAALGRRLTARARELDAAAHDSEVTAAAQGEGSGGRAEWEKRGSGRGRTLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNSERD---LLEHYHAELVAGL 1888
+W+ KR +L + +LR FR+ E E+ G PS A+LG+R+ A + A+ ++ R +TLVHGDLK+ N+FF RS V DWQW G GL A DVA ++ TSV +S L+ +RD LL+ YH L L
Sbjct: 547 WWAYPKRGELELAQAASVWPGVLRHFRSFF-------EAEDSGL---PSMAELASLGQRMIQHAAYISASLSEAP----------------------RLQTLVHGDLKSANLFFET----------------------------RSREVVAFDWQWSGLGLGALDVANLLNTSVSISLLSDDRDEQELLQFYHTCLTEKL 686
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Match: A0A7S1SYQ0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SYQ0_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 1.460e-6 Identity = 36/101 (35.64%), Postives = 48/101 (47.52%), Query Frame = 2
Query: 1598 TLVHGDLKTWNVFFSKDRAEATATIAGAAAARGSNDAPPPSPTARSGRVKFIDWQWCGEGLAATDVAYMICTSVEVSALNS-ERDLLEHYHAELVAGLENR 1897
T+VHGD K N+ FS D R D+Q+CG GL A DVAY+ C+ ++ + L + E +LL HYHAEL+A L R
Sbjct: 10 TVVHGDFKEENLLFSAD----------------------------GRRCAAHDFQYCGRGLGAKDVAYLFCSGLDSALLPAREAELLGHYHAELMARLSPR 82 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94.17436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig94.17436.1 >prot_S-dermatodea_contig94.17436.1 ID=prot_S-dermatodea_contig94.17436.1|Name=mRNA_S-dermatodea_contig94.17436.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=770bp MQPSPAHTATAAGSPRPKYLEQPTSRGLNDRRLKLPSGEPISAAFLSTVLback to top mRNA from alignment at S-dermatodea_contig94:33711..43131+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig94.17436.1 ID=mRNA_S-dermatodea_contig94.17436.1|Name=mRNA_S-dermatodea_contig94.17436.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9421bp|location=Sequence derived from alignment at S-dermatodea_contig94:33711..43131+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig94:33711..43131+ >mRNA_S-dermatodea_contig94.17436.1 ID=mRNA_S-dermatodea_contig94.17436.1|Name=mRNA_S-dermatodea_contig94.17436.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4620bp|location=Sequence derived from alignment at S-dermatodea_contig94:33711..43131+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |