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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1010 |
| Cds size | 1008 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9399.17434.1 >prot_S-dermatodea_contig9399.17434.1 ID=prot_S-dermatodea_contig9399.17434.1|Name=mRNA_S-dermatodea_contig9399.17434.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=336bp
MGAGACLITLAEVPLSPPPGEVVAIVSDRAATGAGELPAGTATSATAATA
SASSTAPPETSVNAVEAAASTALNTGKEPEVDSLPLAKKTATSPMPSAAA
AAPTVPAAATRSAAEGAVAAPAVGNGETVEPERSLAPAGGARLKLSRKIA
GAKSTGPKKTTAGRARSEKKAARNAFRGADQQKTLATTQARTNTAQALVS
LYDKYKEHRPLLSQQGEGIGGLVDGERVAQVPADLPAPAGTLAQPHSSPS
RRIANAGAMSATASAAQAQRPPPQGGRLQFRPAKELGMFRGRSRLSQPTP
TMPGTGPPRAVGARPSQQPDQAAGAKGGASPWADVS back to topmRNA from alignment at S-dermatodea_contig9399:687..6730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig9399.17434.1 ID=mRNA_S-dermatodea_contig9399.17434.1|Name=mRNA_S-dermatodea_contig9399.17434.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6044bp|location=Sequence derived from alignment at S-dermatodea_contig9399:687..6730- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGGGCGGGGGCTTGTTTGATCACCTTAGCGGAGGTGCCGCTGTCGCC
GCCGCCGGGCGAGGTAGTCGCGATCGTTTCCGACAGGGCTGCGACGGGGG
CGGGCGAATTGCCTGCAGGAACCGCAACCTCTGCTACCGCTGCTACCGCT
TCTGCCTCTTCTACCGCTCCGCCGGAGACGAGCGTCAACGCCGTTGAGGC
CGCCGCCTCAACCGCCCTTAACACGGGCAAGGAACCGGAGGTGGACAGCT
TACCATTGGCGAAGAAGACAGCGACATCGCCGATGCCTTCAGCAGCGGCG
GCAGCACCGACAGTCCCGGCTGCAGCAACGAGATCGGCGGCGGAAGGGGC
AGTGGCGGCGCCGGCTGTAGGAAATGGTGAGACGGTCGAGCCAGAGCGTA
GCCTCGCTCCCGCAGGTGGTGCGCGGCTAAAGCTTAGCCGTAAAATTGCG
GGCGCGAAGTCGACTGGTCCCAAGAAAACAACAGCAGGCCGGGCCAGGTC
CGAGAAGAAGGCGGCTAGGAACGCTTTCCGCGGCGCTGACCAGCAAAAAA
CTTTAGCCACGACCCAAGCCAGAACCAATACCGCTCAGGCGCTAGTGTCC
TTGTACGACAAGTACAAGGAACACCGACCCCTACTCTCCCAGCAGGGGGA
AGGTATTGGGGGGCTGGTCGACGGCGAAAGAGTGGCGCAGGTGAGTTGCG
GGTTGAGTACCTAGGTGGGCAAACATGCTTCAGTGCAAACATGGATCTAC
CCGCTCGTCAGTCACGGTTGGGAAGGCGACGAGTTCGTACAAACCGAAGA
ATCGGCGGAAGTGCAGTCGCCCCCTTAGCCATTGGAAATGTTACCTTGTG
TTCTCAATGGCGTGGAGTGCGGGGCCGTCCCTGTAGCAGACACACAAGAC
CGCGCGATGGACAGCATGCTAGTTTGTTGAGACAAAAGTCTCTCGTCTAG
ACATAGGTGGCACATGAGAAAGCCATTTGACCCTCTCATAGTAGTGCCAT
TCGACTTCGAGCGTGCACTACGTTTGTGCGAGCTGCAGGGGCAACCCATG
AGCCATGTCCTCTAGTCACCCGCCTCTCTCCTGGATGCGTTCCCGATGGA
TAGGTGCCCGCGGACTTACCAGCGCCAGCGGGTACCCTTGCCCAGCCGCA
CTCATCTCCATCCCGGCGGTGAGTGGGACGACGGGGGCATGTAAGGCGGG
AAAATTGTGACAGCGGATGACATACTACAACCCCCCCGTGCCTCGGCTGC
TTGTACTGAATAGCAATCAGGCGTGGTTTCGCGCTGTTTCCCGCGCTTTT
TCTCTTTTATTTTATGCTGCCTCGAGAAGCCCGGATATGTCCTGTGCTGC
CTGAATTGATACGTGTTTTGGAGCTGCACTCCTCCTTTCGTGGCATCACC
ACCTTTTTGTGGTAAAAGTATGTGGAGGTGTATTGCTGCAGATTATACTT
GTTTGCAGGGCGCGTGAGTGTCTGCGTTATTTCCTCGTGTCCCCAGTTCT
CCTTACCCTTTCCCGAAGGCACACATAGCATGGGCGCTGTGCCGACCCCG
ATCCTGCACGCCATGTGCCCGTCAAGCGCGGACATGCAGCAAATCGATCG
AGGTCGGAGTGATGACGTTTAGCGATTTCCCGCGGGCTGAATGGACTCCA
GCGTATTAAGCTGTCCTTATCTTTTGTCAGACGGTGGTGTGCCACTTGTC
GGGCATGGCTTGATCCTACTTGCAGAACTCGTACCGAGCGGTCGAGCAGG
CGGGTCGAGACGTAGAGAACTTCGCACGCTTGTCTAGTGGAAGGTACACC
AGGCCCCGAGCAGAGGCGTTAATAACACCGACCGTACCCCGTGCACCGCA
CCACCCCCATCGGTGCAAAATCCGTCCTACAGGATAGCCAACGCCGGGGC
CATGTCTGCAACGGCAAGCGCGGCCCAGGCCCAGAGGCCACCACCTCAGG
TAAAGTCGCCAAGATAGAGCTGGAGTTCTCTAGTGTAGCTTCCAGCCTGT
AATTTGAGCTTCGGCGTTTCGACGGTGTCCGGCGATCACGGCGATGGTTG
GGATCAAAACATGACCATCATGAGTATCTTCCCTTGGTTGTTCCGAGACC
TCGATGCACCGCTGCGACCTGCGAACGCCCTGCAGTGACCTGCATACGCC
GTGACTAGCGAGCGTTAATATTTCCCGCCGGCCTCTTGGTTCTGCTTCTG
TGTGTCGTGGTATCGAATTTCGATGGCGTAACAGGGTGGCCGCCTACAAT
TCAGGCCGGCCAAGGAATTGGGGATGTTCCGAGGAAGATCGCGCTTAAGT
CAGGTACGTACGTACACTCCACGGAGCGCACCCAGGCGACCAGGAATACT
ATCGTGTGGGAATTAGAAGGCATGCTGCGTGCGACACGTTCGAATGAGCA
GGCGCGCGATACCTTTGCTCGCTCGAGCTTACCTACTCCGGGGGACGCGC
AATGCGTTGCCGTCATCGTGTGCTTCCATATGTATGGTTTCAAGGTTGGG
TTTTACTCTCGCTGGCTAAACGTCCCCCCGTACTCTAGATTGTGGTCGCC
ATTCTAACCTAACCTTCGTTCTCCCCGATCAGTGCCACAATGGCGCGGAA
CACACCGTGCTTACAATAGTATGGAGCGGACGACGTTGATATATACTGTT
GAGGATATCGTAGTACGAAAGCGCCTTGCGCTGCCGGGCCTCGGGTTTAA
GGTCTGCATAACTTATTTCAGGTTTCCACGCAAGATTGGGCACATAACCG
AGAAAAAGTCAAAATCCTCCAAAGTATACATCGTGGATGCTTGAAACAGT
GGGTAGAACAACCTAAGGGCGTGAGAAAACACAGAGCGCACCCACATGAA
GCGCAAGAGCAACAAGAGAAGGTACAGGTTGAAGGCTAGGCTTCCAGCAA
GCGAGACTGAATCAATCCTCCTGAACAATCCCCACCATAGAGACGCCACA
GAGAGATGCGGTAGAGATCCACGAAAAGAGCGAAAAATCTAAAGTATTAA
TAGAGGCAATAGGCCGCAGGGAAAAGGGCATGTGGAGATCACTAGACCCA
AGAACAGCTCTCTCACTGCAGTAGTATCGACGTCAAGGAAAACAGCAAAT
ATAACTTCAAAAGCAGCACTTTGCAGGAGGGTATACCGAAACAGAAGAGG
CCAGGGGTAGCTCAAATATACCCGGCCAGTTTTCACGGCGTTTACCTGTC
TGATGCAATAGAAACATCTCTCGGCGAGGATATATAATCATTTGACGGGA
GTCAGAGATTCAAGCCAAAGGGAATCATTGGAATAATTCCCTCCACTGAC
ACCGTGTCAAGGACGAGTAGAAGGAAGAGCGCTGCGAAAACTACGAATAA
TACAAATGTATTACTTAGTTCCGTAATGTGTTATGATGCTCGTGAACAGC
AGCGCTAGCGATGAGGAGGCAACGGCCAACAGTGACAATGGAACAAAGGC
CACTGTGCACCCAAGCGTGTATTGTCAAACGGCTTAGCTCGAGCCCCGGT
TTACAGTTCCCGCTAGGATGAATCGTCTGGGGAAAGGCACCAAACCACTC
CCCTGCTCCCCAACAGTCAGGTCGGTTCATTGGATGCCACATTAAACATC
ACCATGGAAAGGCAGTCTTCATGAACTAAACATGTGTACGATGCGATACG
TTTCAAAATTTGCTACACGTTGACTGCGTTGGGGGCCAGGTGTTGCTTGC
AGAAATCGCTGCTGGTCGCTTTTTCCGGCACTCATCAATATTCATCAAGT
TCAAGGAAACTCGCGACCAGTTATCACGACAGTCCGAGTGCGTTGTGCTT
AAAGCACTGATTTATTGTACATAATAACACTACCGCCGCGGGCATTTTCG
TTGACGCGCCGACCGTTTACTATCGAGACAGACCACATTTCGGAGGGTTC
AAATGTTTTCGCCCATTCGATGATGACCCGATGGCAGTCCCACAAAGCCC
AGCCCATCAGAGCAATGCCCGATGAGCAAGACTTGTGTGTTGCTGTTGCG
GTGCGGAAGTGAGCAGCGGCGATGTTCTGTATCACAAAGAAAACACAGCT
GTCGTTGTTGCGGACATCATGTTAGGCATAGGTCTGTGTATCTTTGGGCT
TTGAAACTTGGTCAAGCGCTACTTAGACCATCACTTACGGGGTCAACAAT
TGGGGTCAAAATCAGAATTTCGCTGAATTGTTTACCGAAAATTTTACTAA
CCAAATTTATGGGGCAGTCAGAATCAGAATTGGGCCCAAAATGTTTTGTC
CAGCCCGCCCACACCACCCAGCTGGTCAAAGTTTCACCTGAAATTTTGAC
CAACTCGGCCCCCGGTCAAAGGTTATGCGGAAGCTGCGCCGCATATTTTA
CCACTCTGTGGTGTGTGTACACCATAATCCATCCCAGAACAGCCAACAGA
CCTATGGTACAAGAGTACAATTTTATGATACAACAAAGGAGAGTACTTGT
GGGCGGCCGGGACGGCTGTTATTGCTCCGATCGGCACACGCCGAGGGACG
GCGGCACGATGCCCCGCGGCTACTGTGCCGCGCCAGCCCGTGGGTCGTGT
TGCTGAGTAAGGGAGGATGGCGAGCGCCTGAGGAACCCAAGACCACCTCT
CGGAGCATACAGTAAAAGGCCTACTTCGTATAATCTTAATAATGATAGTA
GTTGTCCATGCTCGTCGGCGCTCACAGCAGTAGCAAGCGCGCGCGTTAAA
TAGGCCTCTCCGCTCGTGTGCCAGCTGTTTCCTTGCCGTGGCGGGCGTCA
ACACGGGAAAGCGCGCCGAGGAGCCGGGTGACTCACAAAAGTCCTGAGCC
TTCTTGCTAATCCCAACGGGCAGTGCTTGTTATTTCAACCCAAGCTTTGG
ACCCAATCAATTTTGACTCCCATATACCGCTGCGAGTCAAAATTTCCCAC
CTTGGCATGTTCAGTCAAAATTGTGCAAATTTTGACCAGCTCAGCAATTT
TCATTTTGACCCCATGAGGGATGGTGTTAGACCGGAGATAAACATCTTCT
CCCACTGTGAAGTTTCGACTGTCGGTAGTCCGAGCGAAAGTGTAAGATGT
AGTAAAACTTTTGTTTTTGATTACATCGTCTTGCTGTCAAATTGCGGTCT
ATTGAATTCCCCCTGTACAACAATCAAGTCTTTTTTTCGAAAGTGCCATT
ATATTAATCGGACTTGGGGCGGCGGGGCCGTCCCTTGTCCTAGGGCCAAT
CTAAAGGTGGTGTCAGGAAAATTAAAGTATGTTTATCTACAGGACGTTTG
CACAATCAACGAGAGTAGACGCATAGGTGTAGTGATTTGTTCTACAGCAA
TGGCTGCGCCGACACGTGGAGCGCAGTGTATGTAGCACATCAAACAGAGA
AGCGCAGCCGGGCACCAATAGCACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCCTGTTCGTTTTGAGCAAACGGTCGATGGGGTCAGACGCCACAC
AGTAAAACGCCGATGTGCATTAACCGAATCGTGTTCCGCTCAGCTTTGCA
GCGTATTTCTGGTGTCATGTCGAAATATCCGACGAAAACACTTGTCGGAA
TTTTCCCGCAAATCACTTCCGATGTCGCTGCGATGCCTGGTGCACTGTTT
GGAATAGAATAGAGGCGCATCCCGACGTTTGCTTTCCTCTTCTCAGCACG
AATGCGGGGAACCCAGCGTTGTAAAAGAAAATTGCGAACCTCCGATGCCC
TTTCCCTGTTTTCGATTGCGGCACGTTGTCCTTATGAGCCCTTGAAGTTG
GACTTGCGCGCACGCTCCTAGCGCAACCTTCCCCCCATTGTCCCGCGCTG
GCAAGTAGAGCAACGCCATTTGAACGGCGGTGGGGCGATTTAAACTAAAG
CATGTCCTCATGGCAAACCAGCTAAGCCTTTTCCCGTATCCTCGCTGCGC
CCTCGCGCTTGGACCATCTTCTTCCAGCCAACACCAACAATGCCTGGCAC
TGGGCCACCTCGAGCTGTAGGCGCGCGTCCTTCGCAACAGCCCGACCAGG
CCGCTGGGGCCAAGGGCGGCGCCTCTCCCTGGGCGGATGTCTCG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig9399:687..6730- >mRNA_S-dermatodea_contig9399.17434.1 ID=mRNA_S-dermatodea_contig9399.17434.1|Name=mRNA_S-dermatodea_contig9399.17434.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at S-dermatodea_contig9399:687..6730- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGGGCGGGGGCTTGTTTGATCACCTTAGCGGAGGTGCCGCTGTCGCC
GCCGCCGGGCGAGGTAGTCGCGATCGTTTCCGACAGGGCTGCGACGGGGG
CGGGCGAATTGCCTGCAGGAACCGCAACCTCTGCTACCGCTGCTACCGCT
TCTGCCTCTTCTACCGCTCCGCCGGAGACGAGCGTCAACGCCGTTGAGGC
CGCCGCCTCAACCGCCCTTAACACGGGCAAGGAACCGGAGGTGGACAGCT
TACCATTGGCGAAGAAGACAGCGACATCGCCGATGCCTTCAGCAGCGGCG
GCAGCACCGACAGTCCCGGCTGCAGCAACGAGATCGGCGGCGGAAGGGGC
AGTGGCGGCGCCGGCTGTAGGAAATGGTGAGACGGTCGAGCCAGAGCGTA
GCCTCGCTCCCGCAGGTGGTGCGCGGCTAAAGCTTAGCCGTAAAATTGCG
GGCGCGAAGTCGACTGGTCCCAAGAAAACAACAGCAGGCCGGGCCAGGTC
CGAGAAGAAGGCGGCTAGGAACGCTTTCCGCGGCGCTGACCAGCAAAAAA
CTTTAGCCACGACCCAAGCCAGAACCAATACCGCTCAGGCGCTAGTGTCC
TTGTACGACAAGTACAAGGAACACCGACCCCTACTCTCCCAGCAGGGGGA
AGGTATTGGGGGGCTGGTCGACGGCGAAAGAGTGGCGCAGATGGGGGCGG
GGGCTTGTTTGATCACCTTAGCGGAGGTGCCGCTGTCGCCGCCGCCGGGC
GAGGTAGTCGCGATCGTTTCCGACAGGGCTGCGACGGGGGCGGGCGAATT
GCCTGCAGGAACCGCAACCTCTGCTACCGCTGCTACCGCTTCTGCCTCTT
CTACCGCTCCGCCGGAGACGAGCGTCAACGCCGTTGAGGCCGCCGCCTCA
ACCGCCCTTAACACGGGCAAGGAACCGGAGGTGGACAGCTTACCATTGGC
GAAGAAGACAGCGACATCGCCGATGCCTTCAGCAGCGGCGGCAGCACCGA
CAGTCCCGGCTGCAGCAACGAGATCGGCGGCGGAAGGGGCAGTGGCGGCG
CCGGCTGTAGGAAATGGTGAGACGGTCGAGCCAGAGCGTAGCCTCGCTCC
CGCAGGTGGTGCGCGGCTAAAGCTTAGCCGTAAAATTGCGGGCGCGAAGT
CGACTGGTCCCAAGAAAACAACAGCAGGCCGGGCCAGGTCCGAGAAGAAG
GCGGCTAGGAACGCTTTCCGCGGCGCTGACCAGCAAAAAACTTTAGCCAC
GACCCAAGCCAGAACCAATACCGCTCAGGCGCTAGTGTCCTTGTACGACA
AGTACAAGGAACACCGACCCCTACTCTCCCAGCAGGGGGAAGGTATTGGG
GGGCTGGTCGACGGCGAAAGAGTGGCGCAGGTGCCCGCGGACTTACCAGC
GCCAGCGGGTACCCTTGCCCAGCCGCACTCATCTCCATCCCGGCGGTGCC
CGCGGACTTACCAGCGCCAGCGGGTACCCTTGCCCAGCCGCACTCATCTC
CATCCCGGCGGATAGCCAACGCCGGGGCCATGTCTGCAACGGCAAGCGCG
GCCCAGGCCCAGAGGCCACCACCTCAGGATAGCCAACGCCGGGGCCATGT
CTGCAACGGCAAGCGCGGCCCAGGCCCAGAGGCCACCACCTCAGGGTGGC
CGCCTACAATTCAGGCCGGCCAAGGAATTGGGGATGTTCCGAGGAAGATC
GCGCTTAAGTCAGGGTGGCCGCCTACAATTCAGGCCGGCCAAGGAATTGG
GGATGTTCCGAGGAAGATCGCGCTTAAGTCAGCCAACACCAACAATGCCT
GGCACTGGGCCACCTCGAGCTGTAGGCGCGCGTCCTTCGCAACAGCCCGA
CCAGGCCGCTGGGGCCAAGGGCGGCGCCTCTCCCTGGGCGGATGTCTCGC
CAACACCAACAATGCCTGGCACTGGGCCACCTCGAGCTGTAGGCGCGCGT
CCTTCGCAACAGCCCGACCAGGCCGCTGGGGCCAAGGGCGGCGCCTCTCC
CTGGGCGGATGTCTCG back to top
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