mRNA_S-dermatodea_contig93884.17430.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: D7G8S4_ECTSI (Serine O-acetyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S4_ECTSI) HSP 1 Score: 145 bits (366), Expect = 5.860e-40 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
+V +LM DM+ADEP LDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLM+WLWRR+R NLARYLQS+CSEV
Sbjct: 222 EVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 299
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A835ZGB2_9STRA (Serine O-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.250e-18 Identity = 40/79 (50.63%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSL-PDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
+V +M +MF +P ++ ++A D+LAHA++D+ D+L+ +LFHKGF AL TYRL HWLW++ R+ LAR+ QSV SEV
Sbjct: 64 EVGTIMTEMFEADPEVEEIMAADILAHALRDSDDGTDLLSVLLFHKGFHALATYRLAHWLWQQGRRQLARFFQSVNSEV 142
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A023D2Z9_ACIMT (Serine acetyltransferase n=1 Tax=Acidomonas methanolica NBRC 104435 TaxID=1231351 RepID=A0A023D2Z9_ACIMT) HSP 1 Score: 71.2 bits (173), Expect = 5.660e-13 Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 4 VSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSE 231
++AL+ A P + D++A +D + PD +TA LF KG+ A+ +R+ HWLWR +RQ+LAR++QS+ SE
Sbjct: 72 LTALVASALAHSPAIAEAACADMIAVQERDAACPDYVTAFLFFKGYHAIQAHRIAHWLWRHDRQHLARHIQSLVSE 147
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A1M6MFJ3_9BACT (Serine acetyltransferase n=1 Tax=Rubritalea squalenifaciens DSM 18772 TaxID=1123071 RepID=A0A1M6MFJ3_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 4.200e-12 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
++ L+ D+F + P + A D++A +D + + MLF KGF A+ TYR+ H+LW+ +R +LA Y QS+CSEV
Sbjct: 76 ELMPLLKDVFVNNPMVTRSAAADMMAIYERDPACKSPMEPMLFFKGFMAMATYRVSHFLWKMDRTSLALYFQSICSEV 153
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: W7TD91_9STRA (Serine O-acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD91_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 6.840e-12 Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
++ L+ +F +EP + + EDLL M+D+S+P +L A LF KG+ A+ TYR+ H ++ + R++LARYLQS+ SE+
Sbjct: 155 KMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSEL 232
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: D5EHU8_CORAD (Serine acetyltransferase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EHU8_CORAD) HSP 1 Score: 66.6 bits (161), Expect = 2.590e-11 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 10 ALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
++ D F +P + VA D+ A +D + PDVLT +L+ KGF +L YR+ H+LW +ER+ LA YLQS+ SE
Sbjct: 65 SVFIDAFESDPQILQRVACDMNAVKERDPACPDVLTPLLYFKGFQSLVCYRVSHYLWHQERRELALYLQSLISET 139
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A0P0EXP5_AZOBR (Serine acetyltransferase n=24 Tax=Azospirillaceae TaxID=2829815 RepID=A0A0P0EXP5_AZOBR) HSP 1 Score: 66.6 bits (161), Expect = 3.350e-11 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
Q++ L+ AD P + DL A +D + + LT L++KGF AL +R+ HWLWRRER++LA +LQS SEV
Sbjct: 89 QLAMLVRSAVADAPCIVEEACSDLQAICTRDPAADNCLTPFLYYKGFHALEWHRIGHWLWRRERRDLAHFLQSRVSEV 166
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A5N3PA95_9HYPH (Serine acetyltransferase n=1 Tax=Microvirga brassicacearum TaxID=2580413 RepID=A0A5N3PA95_9HYPH) HSP 1 Score: 65.9 bits (159), Expect = 5.640e-11 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 22 DMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
+ FAD+P + D++A +D + VL +L+ KGF A+ T+RL HWLW R+RQ+ A YLQS SEV
Sbjct: 81 EAFADDPSIREAFRADIVAVMDRDPACTRVLEPVLYFKGFHAIQTHRLAHWLWNRKRQDFALYLQSRSSEV 151
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: UPI001A9FFC56 (Serine O-acetyltransferase n=2 Tax=Acetobacter garciniae TaxID=2817435 RepID=UPI001A9FFC56) HSP 1 Score: 65.9 bits (159), Expect = 6.030e-11 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 13 LMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
L+ + F EP + A DLLA +D + PD +T LF KG+ A+ TYR+ HWLW R++LA +LQS SE+
Sbjct: 83 LVQEGFDAEPDIVCAAAADLLAIRERDPACPDFVTPFLFFKGYQAVQTYRVAHWLWHEGRRHLALHLQSRASEL 156
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Match: A0A2E5XGG8_9BACT (Serine acetyltransferase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A2E5XGG8_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 6.070e-11 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 1 QVSALMCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRERQNLARYLQSVCSEV 234
++S L + D P L A DL A +D + L ML++KGF A+TTYR+ H+LW RQ +A YLQS+ +EV
Sbjct: 77 ELSPLFGGLLRDHPGLVHSAAADLAAIVQRDPACSSPLEPMLYYKGFLAITTYRVSHYLWHNGRQAMALYLQSLANEV 154 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig93884.17430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig93884.17430.1 >prot_S-dermatodea_contig93884.17430.1 ID=prot_S-dermatodea_contig93884.17430.1|Name=mRNA_S-dermatodea_contig93884.17430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=75bp MCDMFADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLback to top mRNA from alignment at S-dermatodea_contig93884:197..436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig93884.17430.1 ID=mRNA_S-dermatodea_contig93884.17430.1|Name=mRNA_S-dermatodea_contig93884.17430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at S-dermatodea_contig93884:197..436+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig93884:197..436+ >mRNA_S-dermatodea_contig93884.17430.1 ID=mRNA_S-dermatodea_contig93884.17430.1|Name=mRNA_S-dermatodea_contig93884.17430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at S-dermatodea_contig93884:197..436+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |