mRNA_S-dermatodea_contig9386.17428.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FIR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.470e-46 Identity = 68/113 (60.18%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 1 AGFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
+G+ RR G+ILA+C+ E F+SWSTLCVH ++FF+R+YR WRIL+KHDDKMW + +QIL +SS+SLIPV ATWA+P TG FDE AN C+T+ S + LG+DA GF I +LW
Sbjct: 71 SGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRTWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAIVVLGMDALGFLAICYLW 183
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 155 bits (393), Expect = 9.470e-42 Identity = 68/107 (63.55%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 19 REGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
R G+ILA+C+ E F+SWSTLCVH +AFF+R+YRMWRIL+KHDD+MW + +QIL +SS+SLIPV ATWA+P TG FDEVAN C+T+ S + LG+DA GF I +LW
Sbjct: 66 RPGDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLW 172
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE) HSP 1 Score: 128 bits (322), Expect = 6.220e-33 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 4 GFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
G FRR EG+ILA C LE ++W LC H+ AFF+R+YRMWRILVKHD+ MW ++ QI+LLSS+SL P +P FDE N C T+ S+ +TL ++A GF+ I ++W
Sbjct: 71 GLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIW 182
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI) HSP 1 Score: 119 bits (299), Expect = 9.170e-30 Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 4 GFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
GF R +G++LA C+LE ++WSTLC+H+ AFF+R+Y MWRI+V+HD+ + + QI LLSS+SL+P +P FDE N C T+ S+ + LG++A GF+ I FLW
Sbjct: 71 GFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLW 182
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI) HSP 1 Score: 117 bits (294), Expect = 3.510e-29 Identity = 53/113 (46.90%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 1 AGFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
+G R EG+ LA C ++ +SWSTL VH+M+F VR+YRMWRIL+KHDD MW ++ Q++++SS+SL P+ A +P FDE N C T+ S+ + L ++A GF+ I +LW
Sbjct: 54 SGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLW 166
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: A0A6H5K025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE) HSP 1 Score: 114 bits (285), Expect = 7.270e-28 Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 4 GFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMW-----------------RSEN---------QILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
G RR EG++LA C LE F++WS LC H+ AFF+R+YRMWRILVKHDD MW RS + QI+LLSS+SL+P +P FDE N C T+ S+ + L ++ GF+ + +LW
Sbjct: 172 GLIRRSEGDLLAKCYLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKFLSVTFALDKVDLSRSTSPVLTTPVRYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLW 309
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: A0A6H5KB09_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB09_9PHAE) HSP 1 Score: 113 bits (283), Expect = 4.670e-27 Identity = 59/130 (45.38%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 52 EYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMW----------------------------------RSENQILLLSSVSLIPVAATWAIPQTGEFDEVANKCATSPVSQFITLGLDAWGFFGIGFLW 339
+ F++WSTLCVH +AFF R+YRMWRIL KHDD+MW R +QIL +SS+SLIPV A WAIP TG+FDEV N C T VS + LG++ GF I +LW
Sbjct: 4 QSFLAWSTLCVHTVAFFFRVYRMWRILTKHDDQMWHTVREYQLSERFGRLDARRMRHLLCASYISFSMQRHSDQILSMSSLSLIPVVAAWAIPNTGDFDEVENACFTLSVSTVVILGMNGLGFLMIFYLW 133
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FU03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU03_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.720e-17 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 4 GFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMW 156
G RR EG+ILA C LE F++WS LC H+ AFF+R+YRMWRILVKHD+ MW
Sbjct: 71 GLIRRTEGDILAKCPLERFLAWSALCTHMFAFFIRVYRMWRILVKHDENMW 121
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 4.710e-16 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 4 GFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRSENQILLLSSVSLIPVAATWAI 225
G R EG+ LA+C E SWSTL H+M+F VR+YRMWRIL+KHDD MW ++N +L ++++ + W +
Sbjct: 71 GIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRILIKHDDHMWPAKNVVLAMNALGFYAICYLWFV 144
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Match: D7FIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR9_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 8.240e-10 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 58 FMSWSTLCVHVMAFFVRMYRMWRILVKHDDKMWRS 162
F++WSTLCVH AFF R+YRMWRIL+KHDDKMW +
Sbjct: 3 FLTWSTLCVHTAAFFFRVYRMWRILIKHDDKMWNT 37 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9386.17428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9386.17428.1 >prot_S-dermatodea_contig9386.17428.1 ID=prot_S-dermatodea_contig9386.17428.1|Name=mRNA_S-dermatodea_contig9386.17428.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=114bp AGFFRRREGNILASCNLEYFMSWSTLCVHVMAFFVRMYRMWRILVKHDDKback to top mRNA from alignment at S-dermatodea_contig9386:1163..8553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9386.17428.1 ID=mRNA_S-dermatodea_contig9386.17428.1|Name=mRNA_S-dermatodea_contig9386.17428.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7391bp|location=Sequence derived from alignment at S-dermatodea_contig9386:1163..8553+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9386:1163..8553+ >mRNA_S-dermatodea_contig9386.17428.1 ID=mRNA_S-dermatodea_contig9386.17428.1|Name=mRNA_S-dermatodea_contig9386.17428.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at S-dermatodea_contig9386:1163..8553+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |