mRNA_S-dermatodea_contig9383.17424.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9383.17424.1
Unique NamemRNA_S-dermatodea_contig9383.17424.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: D7G017_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G017_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.720e-55
Identity = 112/165 (67.88%), Postives = 124/165 (75.15%), Query Frame = 3 
Query:   72 MASFSQSSSQRDLLDLGFDEVE---HSSGPEDSRSATNTYSASYGAGGEGKGEDRGDAGQHASLSTISFNAADEAKELARREG-TSHGGSFLDNLTDPSASAREYEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVDGRMGPAQACGLICVGDVLVAVG 554
            MA+F QS  Q DLLDLGFD VE    S G  DS++  +T   + G GG G+G       Q ASLSTISFNAADEA++  +R   TSHGGSFLDNLTDP ASAREY+VVFGLS    GRPDLGLTMQADY G QAIVKGF+LVDGR+GPAQA GLICVGDVLVAVG
Sbjct:    1 MAAFGQSGKQVDLLDLGFDSVEIDGPSDGATDSQAGGST---NEGGGGAGQG-------QPASLSTISFNAADEARQQEQRSSETSHGGSFLDNLTDPRASAREYDVVFGLSGGASGRPDLGLTMQADYYGNQAIVKGFSLVDGRVGPAQASGLICVGDVLVAVG 155
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A2D4C602_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C602_PYTIN)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-6
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 3 
Query:  351 PSASAREYEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVDGRMGPAQACGLICVGDVLVAV 551
            P  +   Y+V F        +  +GL ++ D+ G+QA+VKGF  V+G  GPA+ CG+I VGDVL A+
Sbjct:  186 PPRNYDSYDVTFE-------KGPIGLELETDWYGRQAVVKGFKRVNGEDGPAKNCGVIRVGDVLTAI 245
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: D0P3I1_PHYIT (ATP-binding Cassette (ABC) superfamily n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P3I1_PHYIT)

HSP 1 Score: 56.2 bits (134), Expect = 5.390e-6
Identity = 42/118 (35.59%), Postives = 57/118 (48.31%), Query Frame = 3 
Query:  249 SLSTISFNAADEAKELARREGTSHGGSFLDNLTD----------PSASARE-----YEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            S  T S   + EAK  A        G  LD L            PS+SA +     Y+V F        R  +GL ++ D+ G+QA+VKGF  ++  G  GPA+ CG+I VGDVL A+
Sbjct:   41 SRQTFSSTRSGEAKGFA--------GILLDRLLSLGSPSSRPNKPSSSAAKRNYDSYDVTFA-------RGPVGLDLETDWYGRQAVVKGFRAINAAGDEGPAKRCGMIRVGDVLTAI 143
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A833SSX8_PHYIN (Tub family n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SSX8_PHYIN)

HSP 1 Score: 56.2 bits (134), Expect = 5.710e-6
Identity = 42/118 (35.59%), Postives = 57/118 (48.31%), Query Frame = 3 
Query:  249 SLSTISFNAADEAKELARREGTSHGGSFLDNLTD----------PSASARE-----YEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            S  T S   + EAK  A        G  LD L            PS+SA +     Y+V F        R  +GL ++ D+ G+QA+VKGF  ++  G  GPA+ CG+I VGDVL A+
Sbjct:  219 SRQTFSSTRSGEAKGFA--------GILLDRLLSLGSPSSRPNKPSSSAAKRNYDSYDVTFA-------RGPVGLDLETDWYGRQAVVKGFRAINAAGDEGPAKRCGMIRVGDVLTAI 321
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: G5AI69_PHYSP (PDZ domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI69_PHYSP)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-5
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 3 
Query:  309 GTSHGGSFLDNLTDPSASAREYE---VVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            G+S       N T P+A  R Y+   V F      D  P +GL ++ D+ G+QA+VKGF  ++  G  GPA+ CGLI VGDVL A+
Sbjct:   44 GSSSPRPGTPNSTLPAAPRRNYDSYDVTF------DHGP-VGLDLETDWYGRQAVVKGFRAINSAGDDGPAKRCGLIRVGDVLTAI 122
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A8K1C842_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C842_PYTOL)

HSP 1 Score: 53.9 bits (128), Expect = 3.430e-5
Identity = 48/164 (29.27%), Postives = 72/164 (43.90%), Query Frame = 3 
Query:  105 DLLDLGFDEV--EHSSGPEDSRSATNTYSASYGAGGEGKGEDRGDAGQHASLSTISFNAADE----AKELARREGTSHGGSFLDNLTDPSASARE---------YEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVDGRMGPAQACGLICVGDVLVAV 551
            DL   G+ ++  EHS G ++    TN Y+  Y        E R       S+S+     A+E     K L  R  +    S +D     S+ A           Y+V F        +  +GL ++ D+ G+QA+VKGF  +    G A+ CG+I VGDVL A+
Sbjct:   84 DLAHHGWSQLQQEHSEGEDEDEEVTNDYAGGYAP---RPYESR-------SISSRDLARANEPPSFTKSLLARLASFGSTSNIDRRGSVSSQASSSLPLRSYDSYDVTFA-------KGPIGLELETDWYGRQAVVKGFKQIKNEDGVAKTCGVIRVGDVLTAI 230
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A6A3R5U5_9STRA (PDZ domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R5U5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.530e-5
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 3 
Query:  309 GTSHGGSFLDNLTDPSASAREYE---VVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            G+S   + +   T P A  R Y+   V F      D  P +GL ++ D+ G+QA+VKGF  V+  G  GPA+ CGLI VGDVL A+
Sbjct:  243 GSSSPRTSMPISTFPPAPRRNYDSYDVTF------DHGP-VGLDLETDWYGRQAVVKGFRAVNSAGDDGPAKRCGLIRVGDVLTAI 321
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BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A225X0F5_9STRA (ABC transporter n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0F5_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.760e-5
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3 
Query:  321 GGSFLDNLTDPSASAREYEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            G      +  P  +   Y+V F      D  P +GL ++ D+ G+QA+VKGF  ++  G  GPA+ CG+I VGDVL A+
Sbjct:  244 GTPLSSPIAAPKRNYDSYDVTF------DHGP-VGLDLETDWYGRQAVVKGFRAINTAGDEGPAKRCGMIRVGDVLTAI 315
[Close]
BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Match: A0A662YJH7_9STRA (PDZ domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJH7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.720e-5
Identity = 34/90 (37.78%), Postives = 46/90 (51.11%), Query Frame = 3 
Query:  294 LARREGTSHGGSFLDNLTD--PSASAREYEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVD--GRMGPAQACGLICVGDVLVAV 551
            LAR        S   N +D  P  +   Y+V F           +GL ++ D+ G QA+VKGF  ++  G  GPA+ CGLI VGDVL A+
Sbjct:  226 LARLLSLGSSSSPRSNTSDSAPKRNYDSYDVSFEHG-------PVGLDLETDWYGHQAVVKGFRAINTAGDEGPAKRCGLIRVGDVLTAI 308
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9383.17424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G017_ECTSI2.720e-5567.88Tub domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2D4C602_PYTIN2.780e-641.79Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0P3I1_PHYIT5.390e-635.59ATP-binding Cassette (ABC) superfamily n=1 Tax=Phy... [more]
A0A833SSX8_PHYIN5.710e-635.59Tub family n=1 Tax=Phytophthora infestans TaxID=47... [more]
G5AI69_PHYSP1.330e-541.86PDZ domain-containing protein n=1 Tax=Phytophthora... [more]
A0A8K1C842_PYTOL3.430e-529.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3R5U5_9STRA3.530e-541.86PDZ domain-containing protein n=4 Tax=Phytophthora... [more]
A0A225X0F5_9STRA4.760e-537.97ABC transporter n=1 Tax=Phytophthora megakarya Tax... [more]
A0A662YJH7_9STRA8.720e-537.78PDZ domain-containing protein n=2 Tax=Nothophytoph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9383contigS-dermatodea_contig9383:1824..8397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.4
Seed ortholog evalue8.4e-47
Seed eggNOG ortholog2880.D7G017
KEGG koko:K19600
EggNOG free text desc.phosphatidylinositol binding
EggNOG OGsKOG2502@1,KOG2502@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTubby, C-terminal
Ec32 orthologEc-22_003270.1
Exons6
Model size555
Cds size483
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925404.4797778-UTR-S-dermatodea_contig9383:1823..18941622925404.4797778-UTR-S-dermatodea_contig9383:1823..1894Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9383 1824..1894 +
1694079910.7942388-UTR-S-dermatodea_contig9383:1823..18941694079910.7942388-UTR-S-dermatodea_contig9383:1823..1894Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9383 1824..1894 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925404.494049-CDS-S-dermatodea_contig9383:1894..19541622925404.494049-CDS-S-dermatodea_contig9383:1894..1954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 1895..1954 +
1694079910.8057377-CDS-S-dermatodea_contig9383:1894..19541694079910.8057377-CDS-S-dermatodea_contig9383:1894..1954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 1895..1954 +
1622925404.5090804-CDS-S-dermatodea_contig9383:3453..35591622925404.5090804-CDS-S-dermatodea_contig9383:3453..3559Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 3454..3559 +
1694079910.8164093-CDS-S-dermatodea_contig9383:3453..35591694079910.8164093-CDS-S-dermatodea_contig9383:3453..3559Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 3454..3559 +
1622925404.5206804-CDS-S-dermatodea_contig9383:6298..63701622925404.5206804-CDS-S-dermatodea_contig9383:6298..6370Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 6299..6370 +
1694079910.8467717-CDS-S-dermatodea_contig9383:6298..63701694079910.8467717-CDS-S-dermatodea_contig9383:6298..6370Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 6299..6370 +
1622925404.5320683-CDS-S-dermatodea_contig9383:6934..70021622925404.5320683-CDS-S-dermatodea_contig9383:6934..7002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 6935..7002 +
1694079910.860399-CDS-S-dermatodea_contig9383:6934..70021694079910.860399-CDS-S-dermatodea_contig9383:6934..7002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 6935..7002 +
1622925404.5412967-CDS-S-dermatodea_contig9383:7675..77921622925404.5412967-CDS-S-dermatodea_contig9383:7675..7792Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 7676..7792 +
1694079910.871607-CDS-S-dermatodea_contig9383:7675..77921694079910.871607-CDS-S-dermatodea_contig9383:7675..7792Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 7676..7792 +
1622925404.5504208-CDS-S-dermatodea_contig9383:8337..83971622925404.5504208-CDS-S-dermatodea_contig9383:8337..8397Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 8338..8397 +
1694079910.8884344-CDS-S-dermatodea_contig9383:8337..83971694079910.8884344-CDS-S-dermatodea_contig9383:8337..8397Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9383 8338..8397 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9383.17424.1prot_S-dermatodea_contig9383.17424.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9383 1895..8397 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9383.17424.1

>prot_S-dermatodea_contig9383.17424.1 ID=prot_S-dermatodea_contig9383.17424.1|Name=mRNA_S-dermatodea_contig9383.17424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp
MASFSQSSSQRDLLDLGFDEVEHSSGPEDSRSATNTYSASYGAGGEGKGE
DRGDAGQHASLSTISFNAADEAKELARREGTSHGGSFLDNLTDPSASARE
YEVVFGLSRSNDGRPDLGLTMQADYNGKQAIVKGFTLVDGRMGPAQACGL
ICVGDVLVAVG
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mRNA from alignment at S-dermatodea_contig9383:1824..8397+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9383.17424.1 ID=mRNA_S-dermatodea_contig9383.17424.1|Name=mRNA_S-dermatodea_contig9383.17424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6574bp|location=Sequence derived from alignment at S-dermatodea_contig9383:1824..8397+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGCCTGCGTGTGGCGATACCAGTCTGTGGAGTCTGCGAGGTACTGGGGC
GTCGGTGGCGCGGGTTGATCCATGGCGTCATTCAGCCAGTCCAGCTCGCA
ACGGGATCTGCTTGATCTCGGATTCGACGAGGTGAGGACCTTCCTTGCTT
GCTTCTCAGTTGGTATGTCACCTACAAAACTTGTTTCGCGGTTGGCATCC
ACCTGCTTGTCGGTTGGCGTTATACGGTGGTAGTGCACGGGCCGCTCTAT
CGCCGTCCACCCTGATTTAGAAGCTTCGCCTCCGATGTGTGTGTGTGTCT
GTGTGTCTATCTGACTCGCGTCTGTGGTGTCGAGGGATCGATGTTGGGAT
AACCATCCCTTCTCTCTCTACCCGGTTCTTGGCTTAAGTTTTTACTAAGG
CTTGTGATGATTAGACGGTGCACAAATATCGCTTGGGAAGGGTGTGCACT
TGCTTTTACTGCAACCCATCTCGTATCCAGTCGGACGTAGACTACGCATC
CCAACATAGCCGAAACGGGCGATATGTACTTGTATATGCCGGGTTCTAGC
CGGCCAAGCTGCGTTTCACAAGGCTGATGTTGTATCATACGAGCTGCTTG
TTATCACGCTTGCGGTTGCGCCTTCAAGTCGGATATGCCATGGGTTGGTT
GGACATACCGGGTATCCAAATGTTGCACGTTCAGCAGGCGTGACTTAACT
CCAAGTATCGCAAAGGGACTTTGAACTTTGATTTCCGCACTAACGCTCAA
GCGCCGCACGCTCACAACATAAGCGACGGTGTGCGTGTTATACTAGATTC
TGCGCATGGGTTCTCCTGGCGGAGTTGCCAATCATAAGTCCACGGTTGCT
CTCAGGCGTTGCAATAAATTCAGTGTTCTGAGGGCGAATTATAGGATGCG
CAATCTCTTTGGGGAGAAACAAGACTCTTCGACCGAGGTATCTCAGCTCA
CAGGGCACACTGCGTGCAGTCCCCCATGCCCTGTAAATGGATACAGCAGT
GTATAGCAGTTGTACAGCTTCGCCAACCCTACTCGGCCAAACCTCGCCAG
GAACCCAACGCGCCTTGCGCTCAAGTTCAACCTGGCTGTTTGTTGTTGAC
TTCGCGACGGTACAAGTATTTACATTGATTCGATATTTTGTTTTTTGACA
CGCACCTTATTTTGTGCCGATCGGCTCATTCCAAGTACTCGTGTTGAGAT
GGTTTTGCAAGGAAGAGTCAAGGGTAAAACGCTTTTCTATTGCTATACAA
ACCGAATAAGGTATCAACGTGTCTATTAATACATGGAACCCTACAGGACT
ACTTATTGTGGAAGGGAGTGTTACACTCTGAAAAAAAGTTAAAGTCTAAA
TACACCAAACCAAGGGGATAATTTATTGATTGCATTGATTGATTGATTGA
TTGGTTGATTGATTGATTGATTGGTTGATTTATTCATTCATTCATTCATT
CATTCATTCATTCATTCATTCATGCATTCATTCATTCATTCATTCATTCA
TTTGCACACGTATAGCCGATCGGCTTAGTCCGACCCGAGATATGGTCCGA
TGCGCAAAAGAGCCTCGGAGAAAATAAGTAATAACTAATCATCATGGTGG
TGGCTTAACGATCTGCTTGTCGCAACGCAGGTAGAACACTCGAGTGGGCC
GGAGGACAGCCGCAGTGCTACTAACACCTACAGTGCCAGCTATGGAGCCG
GCGGAGAGGGGAAAGGGGAGGACCGCGGGGATGCAGGTTAGGTCGGAGCC
GAGCTTTTGTTGTGTAATGCGGCGCCGGCGTTTGTTGGGGTGTGTTTTGT
TTTTTTTCGTTGGTACCGGCCGGTTGTATCATACGGGTACTGGCTTTTTC
ATTTAGATGTTGATGGATGGTGGAGTGTTTTCCTTGCTTATTTTCCTCGG
TTGTTCGTCGAGCCTGTGGACCTTGACGGCACCCCCGGGTTTCGACCTCA
TGTGCGGTATTATGAGACCGGCATCATTTTTGCCACCCCCACCACCACCA
CGAGGTCTATGGTCTAACGCCTACGGCATGCACGATCAATGAGTACAATG
AGTACACACCCCCCACCACCATCATCATCATGACCAACACCACACTAGTT
TTCAGCACACCATTATTATCACCTACCATGATCACCATTACCACCATCAT
CATCAGAATCGTCCACTAGTGTGTTATTTGCTCCATTACCGTCATCATCA
TCATCATCATCACCAACACCACCATAGTTTTCAGCACACCGTTATTATCA
CCTGCGCGAGAGCGTGAGTAAGCAAAATCCGAGAAATCGGCGAGCTGCGG
GAGTGCCGAACCCAATGCATTCGCGANNNNNNNNNNAAAAAAAAAAAAAA
AAAAGAGGAAAAAAAGAAATGGAATGAACCATAAGAAAAAAAAAAAAAAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGCACCAGTACCATTATCATTATAATCATCCTTTAGTGTGCTA
TTTGCTGCGGTATTTGGCCTCCCTTTCTATTAATGGTATACCCTCCACAC
CGGTGCCCACTGCTGATCGTCCTTCCGTAAAAAACTCACGAGCCTGACCC
GCTGGACTACAAGTATGGTGCGTAACCTCCTTTCATATGCGCCACAGCGG
GCATCCCCGTGCGGTCTTGCCTAGAGCCTCTTGGCGTTGGTACTATGCCT
ACTGCTGTCGCCAGATGTACTTGTTATCAGCTCCATGTGGGCGCGATGTG
GCGATTGCGCTTGCTTGCGACGGCCTGTGCTACCCCTTCAGGCACCTATT
ACCGACTTGAGCCTATTGAAATAATAGATGTTTTAAGCTTTTTGTGGGGA
TCGTCGGCGAGAGAGCTCTCAACCCGCCGCCGATATGTACTGAAAAATGT
TGAAAGATCAGGCTGGCTATTTTAGCTAGCCTTTAGATCAAATCAATCAA
ATAGATATTTCAACCCTCTTGCTTGGAAGTTATTGCCCGTTTTCGGGGCC
ATCTGATCGCTACTGTTTCACATCCAACAAGTCCTTGTACCCTAACCTTA
CGCAGTGGCGGTGAAGAGTGAAGATTGAAGAGGTGGTGATAAAAGCTATT
AACCCTTTTGGGACTAAGGCTGTTTTCGGGTAACTGTTTGCTATTGTGAT
TTACCCTTTTGGGACTAAGCCTGGNNNNNNNNNNTGTTTTCGGGTAACTG
TTGGCTACCATAATAGCAAACAGTTACCCGAAAACAGCCTTAGTCCCAAA
AGGGTTAACAGGCCCAAATTTGCCACGAGTCCCAACCTAGAAAAATCTAA
ATGGGCTGGAATTGTCGAGATTCCAATGTCGATGTTCTTGTGTATGGCGA
TATCTCGTGTCTCTATTTGTTTTTCGTGAGATTTTGTTGTTGTGTGGGTA
TTGTATTCATGGTGATAATAGTTGGGTATTCATGGTCATGAGATTTTGTC
CTGATTACTCGATTATAGTGTACCTCCTATATATTAATAACATGTCTTCC
GGCCTTATCTTGCATGCCCTCTACAGTATTAGCCCTTTTGGTACTATAAA
ATTAGTATTGATAATCAGTAGGGCTACCCGAAACGACCAAAAACTCTCTC
GATGCCAGTCGACAGCTACAGNNNNNNNNNNCCGCTTCAAGCACGCATCA
CTACGTACTAACAGGCGCTCCAAACAGTATAGGGGGCTATTAATAGTACC
AAAAGGGTTAAGAGTGTTAATATTACAGTAACTACTATTGTAGTAGTAGG
TACAGTAGCCACAGTAAGGCTAGGCTACGCCAGTGAGGTGAATAGTCCTA
CTTTTTTCAACTCTTGGCGCTCAACGCAAGCGTCAAGTTGGTTGGCATCA
CTTTTCCCTAAATAATTCCGGCCTCACAAAATTGTTCTATAAATTCGCTA
TCTTATTAATTAATGCAACAGTGACCGATTTTGTTTATTGATTTTAGACA
AGGACGCTGTCTGATGCCAAACAACTTGATGTTTGCGTTGAGCGATTATT
TTATTATACAAAAAGCGAAGACACAGCAGCGACACGCACAGTAGCTCGAC
CGCGTTCGACCTCCGTGTCGCGTTCCGTCGGCAGATCGTCCTGCCAATGC
ACACCTCACACGGGCGTAGCCGTGGCTACCCACTAGTTAATATTAAAAAT
CGGTCGAAGCAGTATTTATTAATCAAGATACTGACGGTATTCGGCGCAAT
AGCGGACTCAGGCTTAAACAGGGTTATCATACAAATATTACATTGCTTAT
AGTAGTAAAAAATTCATAGTAAATAACACCGTGGAGAGAGCGAGAGAGAG
ATGGAATGGTCAATATCATGTTACATGTCGTGTGAACAAGAACTGAACAC
GGCAATCGGATTAAGGCCAGCCAGTATGTATACAAGTATATGTACGTATG
TATTTGCTGAAACCGTCGCTCGCTCGGTGCCCCCTTGCTCGTGCGATGCT
ATGTGATGGAATGGGATGGGAGCAGGGCAGCACGCGTCGCTGTCGACGAT
ATCGTTCAATGCCGCGGACGAGGCGAAGGAGCTGGCTCGACGAGAGGGTG
AGGCGGCTAGTAGTACTGATATTGGTATTATCACGTGAGTGTTACGGTGT
GTCGTTGATATATTTGTTGGTAGCTGACCCGACCAACCACGCCGCGTCAC
AGGTTTCACGCCCCGCTGGATGAGGCTTGTTTTTTTTTAGTATAATCCTA
AGCCCATCCCTCAACAATTGCTATACTTGCTTATACGAGTGTGCTGGTAT
CTATTATTGCTTGCCTCTACACTACTACTGTGTCGCAGATTTTCTCGTTG
GTATTAGAGCTCTATAGTTGGCTCGAATAGCTGGCAATACCACACACGCA
CCGTCACGGGCCTCACGCGCCGCTGGATTCATTTATTTGCTTTTACTCTT
TTTTCGTCAAATTCTAACTGCAACCCTCAGGAATTGCTTCGCTTTTTTCA
AATATAGTATTTTTGATTGGTGTATTGCGTGGCCGTTGTGTCGCAGCTCC
ATTTTTTGCTATCTGACAAAAACCACGCAAGCGGCGTGACGGGCCTCACG
GCGTCACTCGATGGTGTTTTATTTTTGTTTTTGTTTTTCGTCGAATCGCC
GGCCGTCCCAGGTACTTCACACGGAGGGTCATTCCTCGATAACCTCACGG
ACCCGAGCGCAAGCGCTAGGGAATACGAGGCAAGTTTACTTGTGCTATCA
TATTGTATCATAGTGTATCATAGTTTATCGTAGTTTATCATTTTGTATCA
TGTTTCATGTTGTATCATAGTGTATGTATCGTAGTGTATCATATTGTATC
ATGTTGTATCATGTTGTATCATGTTGTATCATGTTGTACAGTATCATGTT
GTATCATGTTTCATGTTGTATCATAGTGGATGTATCATATTGTATCATAG
TCTATCATAGTCTATCATATTGATGCCGTCTTCTCGCCGTTTCATTTTTG
GCATTATCGTTTCGAAATATTTCACGGTAGTGTAGTGTTGTTGCGCAAGT
TCTGTTTTCTTGTAATGTAGTGTAGTGTGTGTGTGTATGTGTGTGTGTGT
GTGTGTGTGTGTTTATTTTTATGTTTTTCCTCTGTGGTTCATTGGTCGAT
CTTGTAACTGGCCAACGCGAGCTGAATTGTGAGATCGGTCTATCGGTTCA
CTACTAGGCGATACCGTCACCATCATCATCATCAGCATGGAGCCATCAAT
TTCAATACCATCAAAACCTCAATGACGTCATCATGACCAATACGTCATCA
CATTCATGACGCCATCGATCCAGTCAATATCACCATGGCGTCATCGTCGC
CAATACCTCATACTATGAATGACCGTCACTATGGCCGTTACGCGGCGTGC
AGGTGGTGTTCGGGCTTAGCAGGAGCAACGATGGTCGGCCAGACCTGGGT
CTGACGATGCAGGCAGACTACAACGGCAAGCAGGCGATCGTTAAGGGCTT
CACGCTCGTCGACGGGCGGGTGAGCTGCCCCTTTTGCTGGCACACAGCGC
CTTGCTTTCATTGGTCGGTTGTTACTATTGGTTGATTCATACAGATATAC
AGATTTGATTGGTCGGGTGACTGTTCGATTGATTGATTTGATTGGTTGGC
TGGCTGGTTCAAGCCGATACCCTGTGTTCCTCCTGGTACCGCTCCCTCCG
ACCGAACTATAACACTTGTAAAACACCCCTTTTTACCCCGGTACCGCCCC
CTTGACCGACCTATAACGCTTACGAAAAGTACCAAATACCCTATTTGACC
CGGTACCGCTCCCTCCGACCGAACTATATCACTTATTAAATACCCTCTTT
TACCCCGGTACCGCCCCCTTGACCGACCTATAACGCTTACGAAAAGTACC
AAATACCCTACTTTGACCCGCTACCGCTGCCTGCGACTGAGCTATACCGC
TTACTAAACCCCCTGTTTCTTCTTCATGCCCTATTTCGCCCCCGACACCG
TTTTTTCCAACCGGACGAATAAACGAACGATGGCGATTATGCTGGGGGAC
GCTGGTGGGTGCAGATGGGACCCGCGCAGGCGTGCGGGCTGATCTGCGTT
GGCGACGTGTTGGTTGCCGTCGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9383:1824..8397+

>mRNA_S-dermatodea_contig9383.17424.1 ID=mRNA_S-dermatodea_contig9383.17424.1|Name=mRNA_S-dermatodea_contig9383.17424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at S-dermatodea_contig9383:1824..8397+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGTCATTCAGCCAGTCCAGCTCGCAACGGGATCTGCTTGATCTCGG
ATTCGACGAGATGGCGTCATTCAGCCAGTCCAGCTCGCAACGGGATCTGC
TTGATCTCGGATTCGACGAGGTAGAACACTCGAGTGGGCCGGAGGACAGC
CGCAGTGCTACTAACACCTACAGTGCCAGCTATGGAGCCGGCGGAGAGGG
GAAAGGGGAGGACCGCGGGGATGCAGGTAGAACACTCGAGTGGGCCGGAG
GACAGCCGCAGTGCTACTAACACCTACAGTGCCAGCTATGGAGCCGGCGG
AGAGGGGAAAGGGGAGGACCGCGGGGATGCAGGGCAGCACGCGTCGCTGT
CGACGATATCGTTCAATGCCGCGGACGAGGCGAAGGAGCTGGCTCGACGA
GAGGGGCAGCACGCGTCGCTGTCGACGATATCGTTCAATGCCGCGGACGA
GGCGAAGGAGCTGGCTCGACGAGAGGGTACTTCACACGGAGGGTCATTCC
TCGATAACCTCACGGACCCGAGCGCAAGCGCTAGGGAATACGAGGTACTT
CACACGGAGGGTCATTCCTCGATAACCTCACGGACCCGAGCGCAAGCGCT
AGGGAATACGAGGTGGTGTTCGGGCTTAGCAGGAGCAACGATGGTCGGCC
AGACCTGGGTCTGACGATGCAGGCAGACTACAACGGCAAGCAGGCGATCG
TTAAGGGCTTCACGCTCGTCGACGGGCGGGTGGTGTTCGGGCTTAGCAGG
AGCAACGATGGTCGGCCAGACCTGGGTCTGACGATGCAGGCAGACTACAA
CGGCAAGCAGGCGATCGTTAAGGGCTTCACGCTCGTCGACGGGCGGATGG
GACCCGCGCAGGCGTGCGGGCTGATCTGCGTTGGCGACGTGTTGGTTGCC
GTCGGGATGGGACCCGCGCAGGCGTGCGGGCTGATCTGCGTTGGCGACGT
GTTGGTTGCCGTCGGG
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