mRNA_S-dermatodea_contig9382.17422.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE) HSP 1 Score: 230 bits (587), Expect = 3.140e-67 Identity = 108/138 (78.26%), Postives = 124/138 (89.86%), Query Frame = 2
Query: 8 AAAKRKKKARVKT-EPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFL-KGRCEKGDKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEVPD-RKRPRESSMQGDQG 412
+AA K+K+ KT EPCLFFC+FGKCS+SDE+CR+VHD+AKVAVCRAFL KG C+KGDKCLLTHAVQAEKMPVC++FEKGMCFTPNCPYLHVKVS+NAAVCP FLKG+CPDGTACRLKHE+PD RKR ++ S GD G
Sbjct: 770 SAAAAKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHG 907
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.540e-65 Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 2
Query: 47 EPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFL-KGRCEKGDKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEVPD-RKRPRESSMQGD 406
EPCLFFC+FGKCSKSDE+CR+VHD+AKVAVCRAFL KG C+KG+KCLLTHAVQAEKMPVC++FEKGMCFTPNCPYLHVKVS+NAAVCP FLKGYCPDGTACRLKHE+PD RKR R+ + GD
Sbjct: 769 EPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARDVTTGGD 890
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.170e-35 Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 2
Query: 41 KTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHE-------VPDRKRPRESSM 397
+TE C+F+ K G+C K + C FVHD K+A+CR FL+G C G KC L+H + KMP C F KGMC C Y HV VSR+AA+C F KGYCPDG CRLKHE +P KRP ++M
Sbjct: 203 RTEYCMFYNKLGECKKKNA-CLFVHDSRKIAICRKFLRGACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKHEFPKSCQLLPSWKRPPAAAM 327
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA) HSP 1 Score: 135 bits (340), Expect = 2.440e-34 Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 2
Query: 53 CLFFCKFGKCSKSDED-CRFVHDKAKVAVCRAFLKGRCEKG-DKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEVPDR 373
C+FF KFG+C K + C ++HD AKVAVCR FL+G C K D+CLLTH V +KMP C FF+ G C +CPY HVKVS +AA+CP F +GYCP G AC L+H + D+
Sbjct: 306 CMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQGSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAMSDQ 414
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE) HSP 1 Score: 125 bits (314), Expect = 1.240e-30 Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 2
Query: 2 VEAAAKRKKKARVKTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHAV-QAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 358
++ A K KKK + CL++ +FGKC+ D+ C+++HDK+K+ C FL G C+ + C L H + E+MP+C + KGMC NCPYLHV VS+NA +CP+F KGYCP+G+AC +KH
Sbjct: 336 IKDAIKSKKK-----QYCLYYNRFGKCNSGDK-CKYIHDKSKIRTCPKFLSGTCQDSE-CHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKH 448
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A7S1I654_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I654_9EUGL) HSP 1 Score: 123 bits (309), Expect = 8.090e-30 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 2
Query: 23 KKKARVKTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHAVQAEKMPVC-VFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEVPDRKRPRESS 394
KKK R E C+F+ +FG C K DC+++HD KVAVCR FL G C D C L H + KMP C +F G+CF CPYLHVKVS +A VCP F KG+CP G AC+ +HE R P S+
Sbjct: 408 KKKGR---EYCIFYNRFGAC-KRGADCKYIHDPQKVAVCRRFLLGECTAAD-CPLWHKLDQAKMPHCKIFITTGLCFRKQCPYLHVKVSPDAPVCPAFQKGHCPKGEACKKRHEYTRRPPPAPSA 527
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: Q54X64_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54X64_DICDI) HSP 1 Score: 119 bits (299), Expect = 2.490e-28 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 2
Query: 2 VEAAAKRKKKARVKTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 358
+E + K+KKK + CLFF +FGKC+ + DCR+ H+ +V +C F+ G C+ D C L H++ + MP+C F MC NCPYLHV +S++ VCP+F+ GYCP G+ C LKH
Sbjct: 352 LEVSEKKKKKKQY----CLFFNRFGKCNNGN-DCRYEHEPKRVRICPKFIAGNCDDPD-CKLQHSLDLDLMPICHLFLNRMCTNDNCPYLHVNLSKDTEVCPDFISGYCPKGSKCELKH 464
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A1X7VEH9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VEH9_AMPQE) HSP 1 Score: 113 bits (282), Expect = 6.060e-26 Identity = 51/126 (40.48%), Postives = 80/126 (63.49%), Query Frame = 2
Query: 11 AAKRKKKARVKTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGD-KCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEV--PDRKR 379
+AKR ++++ CL++ +FG+C++ D+ C+++HD ++A+C FL+G+CE D C +H + EKMPV +C NCPYLHV V NA +C +F+KGYCP G C+ +H + PD R
Sbjct: 504 SAKRNGPHILRSQYCLYYNRFGRCNRGDQ-CQYIHDPKRIAICSKFLRGKCENIDGSCPFSHNISKEKMPVXXXXXXXVCTRDNCPYLHVSVGPNAELCMDFIKGYCPLGEDCKKQHTLTCPDYSR 628
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: A0A1Q3F581_CULTA (Uncharacterized protein n=2 Tax=Culex tarsalis TaxID=7177 RepID=A0A1Q3F581_CULTA) HSP 1 Score: 112 bits (281), Expect = 6.990e-26 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 2
Query: 50 PCLFFCKFGKCSKSDED-CRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHAVQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHE 361
PC + + GKCS + C +HD V +C FLKG C D+CLL+H V EKMPVC FF +G C +CPYLH KVS +C +FL+GYCP C+ +HE
Sbjct: 353 PCQIYRRLGKCSAQLKGKCPRLHDPKHVVICPRFLKGECTLADRCLLSHDVSLEKMPVCRFFLEGRCVKNDCPYLHKKVSETERICEDFLRGYCPLAAKCQRRHE 457
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Match: F0ZNC3_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZNC3_DICPU) HSP 1 Score: 107 bits (268), Expect = 4.050e-24 Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 2
Query: 2 VEAAAKRKKKA------RVKTEPCLFFCKFGKCSKSDEDCRFVHDKAKVAVCRAFLKGRCEKGDKCLLTHA--VQAEKMPVCVFFEKGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 358
++ A +RKKK + K CLFF +FGKC+K E C + HD +V VC F+ +C L H + E+MP+C + +G+C CPYLHVK S++ +CP+FL GYCP+G+ C L+H
Sbjct: 382 IKEAIERKKKIDNLEKKKKKKNYCLFFTRFGKCNKG-EKCTYEHDPQRVRVCTKFISASGCDDVECKLRHPKDLDYEQMPICHMYLRGVCMNDPCPYLHVKFSKDTEICPDFLLGYCPNGSKCNLQH 507 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9382.17422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9382.17422.1 >prot_S-dermatodea_contig9382.17422.1 ID=prot_S-dermatodea_contig9382.17422.1|Name=mRNA_S-dermatodea_contig9382.17422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=169bp GGGGSQEEEKGEGEDGAVPVLLQVRQVLQVRRGLPLRARQGEGGGVSGVPback to top mRNA from alignment at S-dermatodea_contig9382:620..2269- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9382.17422.1 ID=mRNA_S-dermatodea_contig9382.17422.1|Name=mRNA_S-dermatodea_contig9382.17422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1650bp|location=Sequence derived from alignment at S-dermatodea_contig9382:620..2269- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9382:620..2269- >mRNA_S-dermatodea_contig9382.17422.1 ID=mRNA_S-dermatodea_contig9382.17422.1|Name=mRNA_S-dermatodea_contig9382.17422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at S-dermatodea_contig9382:620..2269- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |