mRNA_S-dermatodea_contig9341.17389.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: D7FIZ2_ECTSI (Amidophosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ2_ECTSI) HSP 1 Score: 240 bits (612), Expect = 2.300e-74 Identity = 116/132 (87.88%), Postives = 128/132 (96.97%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQLSATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVVQ 396
RGQDAAGIATS+GRKM+LRKDKGLARDVFGVE+MAGL GAYGVGHVRYPTSG NSVEEAQPFRNNVP+G+CVAHNGH+SNGQLLRDQLSATRHLN+DSDTEL+SE+FGME+AARRP+IGP VT ELLF+VVQ
Sbjct: 30 RGQDAAGIATSNGRKMFLRKDKGLARDVFGVESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQ 161
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A835YNQ4_9STRA (Amidophosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ4_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.120e-35 Identity = 70/121 (57.85%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 1 RGQDAAGIAT---SDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQLSATRHLNSDSDTELISELFGMEMAARRPSI 354
RGQDAAGIAT + GR +YL KDKGL RD + M L G+YGVGHVRYPT+G N+ EEAQPF +P G+ +AHNGHI+N LRDQLS + H+N+DSD+E++S LF E+A PS+
Sbjct: 43 RGQDAAGIATCHHTSGR-LYLHKDKGLVRDALPPQTMLSLRGSYGVGHVRYPTAGCNTREEAQPFLMTMPTGFALAHNGHITNVASLRDQLSTSCHINTDSDSEVLSHLFARELAVHWPSL 162
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A084IQ96_SALHC (Amidophosphoribosyltransferase n=4 Tax=Salinisphaera TaxID=180541 RepID=A0A084IQ96_SALHC) HSP 1 Score: 134 bits (336), Expect = 2.080e-34 Identity = 71/133 (53.38%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQL--SATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI T+DGR+MYLRK GL RDVF ++M L G GVGHVRYPT+G +S EAQPF N P G C++HNG+++N L+D+L S RHLN+DSDTE++ +F E+ S + PE +FE V
Sbjct: 27 RGQDAAGIVTTDGRRMYLRKANGLVRDVFRTDHMLRLVGNAGVGHVRYPTAGLDSSAEAQPFYVNTPYGICLSHNGNLTNADQLKDELYRSDRRHLNTDSDTEILLNVFAHELMQ---SESLQLAPEDIFEAV 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: UPI000DBE0AE1 (amidophosphoribosyltransferase n=1 Tax=Salifodinibacter halophilus TaxID=2723847 RepID=UPI000DBE0AE1) HSP 1 Score: 131 bits (329), Expect = 2.110e-33 Identity = 65/133 (48.87%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQLSAT--RHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI T+DGR+MYLRKD GL RDVF ++M L+G G+GHVRYPT+G + EAQPF N P G C+AHNG+++N + L D+L T RHLN++SD+E++ +F E+ + ++P +F+ +
Sbjct: 27 RGQDAAGIVTTDGRRMYLRKDNGLVRDVFRTDHMLRLAGNAGIGHVRYPTAGVETSAEAQPFYVNTPYGICLAHNGNLTNAEQLSDELYRTDRRHLNTNSDSEILLNVFAHELMRH---VDLELSPSEIFKAI 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A1F6TS09_9PROT (Amidophosphoribosyltransferase n=3 Tax=Candidatus Muproteobacteria TaxID=1817795 RepID=A0A1F6TS09_9PROT) HSP 1 Score: 130 bits (328), Expect = 3.020e-33 Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQL--SATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI TSDG ++YLRKD GL RDVF +M GL G G+GHVRYPT+G +S EAQPF N P G +AHNG+++N + L+D+L RH+N+DSD+E++ +F E+ A +TPE LF V
Sbjct: 27 RGQDAAGILTSDGGRIYLRKDNGLVRDVFLQRHMLGLKGNTGIGHVRYPTAGCDSPAEAQPFYVNSPFGLALAHNGNLTNAEQLKDELFREDLRHINTDSDSEILLNVFAHELQAVAKL---RLTPEQLFRAV 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A1F6TV60_9PROT (Amidophosphoribosyltransferase n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_65_34 TaxID=1817760 RepID=A0A1F6TV60_9PROT) HSP 1 Score: 130 bits (327), Expect = 4.320e-33 Identity = 67/133 (50.38%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQL--SATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI TSDGR++YLRKD GL RDVF +M L G G+GHVRYPT+G +S EAQPF N P G +AHNG+++N + L+D++ RH+N+DSD+E++ +F E+ A +TPE +F V
Sbjct: 27 RGQDAAGILTSDGRRVYLRKDNGLVRDVFQQHHMLALKGQMGIGHVRYPTAGCDSPAEAQPFYVNSPFGLALAHNGNLTNAEQLKDEIFREDLRHINTDSDSEILLNVFAHELQAVAKL---RLTPEHVFRAV 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A7C5TKL6_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TKL6_9GAMM) HSP 1 Score: 130 bits (326), Expect = 5.710e-33 Identity = 66/133 (49.62%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQL--SATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI T +GR++YLRKD GL RDVF +M L G+ G+GHVRYPT+G+ S EAQPF N P G +AHNG+++N + L+ +L + RH+N+DSD+E++ +F E+ + S G +TPE +F V
Sbjct: 27 RGQDAAGIMTCEGRRLYLRKDNGLVRDVFHTRHMLRLRGSMGIGHVRYPTAGNASSAEAQPFYVNSPFGISLAHNGNLTNAEALKRELFLADRRHINTDSDSEILLNVFAQEL---QRSAGLRLTPEAVFAAV 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A539DZ92_9GAMM (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A539DZ92_9GAMM) HSP 1 Score: 124 bits (311), Expect = 8.130e-33 Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQLSAT--RHLNSDSDTELISELFGMEM 333
RGQDAAGI T DG K+YLRKD GL RDVF +M L G+ G+GHVRYPT+G +S EAQPF N P G +AHNG+++N + L+ + A RH+N++SD+E++ +F EM
Sbjct: 27 RGQDAAGIVTCDGHKLYLRKDNGLVRDVFSTRHMLDLRGSMGIGHVRYPTAGCSSSAEAQPFYVNSPFGITLAHNGNLTNAEQLKQHMFAEDRRHINTESDSEVLLNVFAHEM 139
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: A0A1C2G4I8_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Acidiferrobacter TaxID=986106 RepID=A0A1C2G4I8_9GAMM) HSP 1 Score: 129 bits (324), Expect = 1.080e-32 Identity = 67/133 (50.38%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQL--SATRHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI TSDG+++YLRKD GL RDVF +M L G G+GHVRYPT+G S EAQPF N P G +AHNG+++N LRD+L RH+N++SD+E++ +F EM + G +TPE +F +
Sbjct: 27 RGQDAAGIITSDGKRVYLRKDNGLVRDVFQASHMMALRGDMGIGHVRYPTAGCASSAEAQPFYVNSPFGLAIAHNGNLTNAAELRDELFREDQRHINTESDSEVLLNVFAHEM---QKVGGVTLTPEHVFRAI 156
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Match: UPI000A5A43CC (class II glutamine amidotransferase n=2 Tax=Acinetobacter calcoaceticus/baumannii complex TaxID=909768 RepID=UPI000A5A43CC) HSP 1 Score: 121 bits (304), Expect = 2.150e-32 Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 1 RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTSGSNSVEEAQPFRNNVPMGYCVAHNGHISNGQLLRDQLSAT--RHLNSDSDTELISELFGMEMAARRPSIGPAVTPELLFEVV 393
RGQDAAGI T +++LRKD G+ RDVF +M L G YG+GHVRYPT+GS+S EAQPF N P G +AHNG+++N + + D L T RH+N+DSD+E++ +F E+ + ++ P TPE +F V
Sbjct: 27 RGQDAAGIVTCHEGRLFLRKDNGMVRDVFHTRHMRALLGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQ-KIGTLNP--TPEDIFHTV 156 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9341.17389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9341.17389.1 >prot_S-dermatodea_contig9341.17389.1 ID=prot_S-dermatodea_contig9341.17389.1|Name=mRNA_S-dermatodea_contig9341.17389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=132bp RGQDAAGIATSDGRKMYLRKDKGLARDVFGVENMAGLSGAYGVGHVRYPTback to top mRNA from alignment at S-dermatodea_contig9341:4443..6806+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9341.17389.1 ID=mRNA_S-dermatodea_contig9341.17389.1|Name=mRNA_S-dermatodea_contig9341.17389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2364bp|location=Sequence derived from alignment at S-dermatodea_contig9341:4443..6806+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9341:4443..6806+ >mRNA_S-dermatodea_contig9341.17389.1 ID=mRNA_S-dermatodea_contig9341.17389.1|Name=mRNA_S-dermatodea_contig9341.17389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at S-dermatodea_contig9341:4443..6806+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |