mRNA_S-dermatodea_contig934.17386.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: D7G9C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C3_ECTSI) HSP 1 Score: 644 bits (1662), Expect = 5.410e-211 Identity = 428/909 (47.08%), Postives = 506/909 (55.67%), Query Frame = 1
Query: 1 QAFFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLDMSGPEPLLSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYMQDAEIDAKEAAKKVDVRLQASHGVGDAKGGWVADFGLSYREPVPFQSPFEVQPRQGVVEPRSDGIFKVILPVHMEGVMAARLVADAYWLPA---GGGTSSRACRSLGIVH-EETENRKCTILTVTHRDRAR-VDFAVHKPE----MISSLAQKKISTVERGPGDSPSAI----LGSAERTPADNQSWFGAGATSAAKPPTPEEAPCQPTPSCGGETTSTSSLGSQLPGDGTSEAPPGGPRGS--------------------------------STKSQLSNALVAATSVHKAVETIVANTINRKHGRSTTAAVFLKANALGIEPWLALDKKTHAALLIAPITAATRASPTVTSLTSILKGRAVVGLSLKGAGGVYSKPCGKQFLKFEVWSTRAGA-SSPWAAHPTMRRQARIHPRTIWGGGGTLISHISLSNMLTIPVSFRAETLGPFAINPAPSKKRLTKHGGTASGKTDPT------------------------------ATKRTR--------KRGEMAETTVASK--------------------LATLLPGQTLQLELVFLPARASNEMAAAIHSSFAPGSEDIPNLTLRAEGELNISFLTGHSQTIWLRGEVTRPMITVAPATHTFGSIHAELSGNATLYLGNPTRTDAEWSLSHVPAPPPKHRL--SDNITSSSGVNSAPYS-PTRGSRNGAXXXXXXXXXXXXXXSAKPATARVA-------IDDPSVFVFGEESGVAAGAKLPLASSAACLPEDWNRLD 2385
+AFFSA GRARTKAQ+DQREDC+ LK GLGAAFLVEP GTL PWGV +++T FNDTPGRY+DK+++ GAP AS PMK+VV+GSPLSLKREALGLDMSGPEPLL+FGEVFV+GG TFR+IKVKNEGTLPA+LTW MQDA IDAKEAAKKVDV L+ GGW+AD +SYR P PFQSPF VQPRQGVVEPRSDG FKV+LP H +G M+ARLVADAYW+P G+S+ C + I + T+++ + D R V+ + PE +S L+Q +R P P A+ L ERTP S F G AA PE GS P G +P G S +V A T+V+NTINRKHGR+T AV LKA A GIEP LALDKKTHA+L +S V + T + G G + GAG +QFLKFE WSTRA A SSPWAAHP+MRRQ ISLSN LTIPVSFR ET GPF IN P KKRL + G S +T + + KR R RG+ + + ++ L +LLPGQ QLE+VFLP RAS +M + SSF+PG+E IP L LR GEL I+F TGH Q I+LRGEV RPMITVAPATH+FG+IH E GNATL+LGNPT DAEWSL H+PAPPPK RL S+N ++ + P S P R + S + VA +DDPSVFVFGEE GV G KLPL SSAACLPEDWNR +
Sbjct: 402 EAFFSAGGRARTKAQIDQREDCFALKEGLGAAFLVEPSSGTLAPWGVATVAVTVFNDTPGRYTDKMDITLTGAPTASLPMKVVVEGSPLSLKREALGLDMSGPEPLLNFGEVFVHGGKTFRIIKVKNEGTLPAMLTWGMQDANIDAKEAAKKVDVCLKIVPSADG--GGWLADVSVSYRPPKPFQSPFVVQPRQGVVEPRSDGAFKVLLPQHEKGEMSARLVADAYWMPVPLPSDGSSASPCGNSAISSLKPTKSKSKDVAPAAAADLPRTVEGGSYGPENGDPSMSPLSQG--GKPDRNPCSDPVAVGKEGLTGNERTPKLVASGFPLG-NGAAVATIPES-------------------GSDKPAAGNRVSPAHGGGASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLAARTLVSNTINRKHGRTTNGAVVLKATAWGIEPRLALDKKTHASLQHDVGGGGGASSAGVAARTGLDVG--ATGATRDGAGXXXXXXXXQQFLKFESWSTRASAASSPWAAHPSMRRQ------------------ISLSNPLTIPVSFRVETSGPFVINRCPPKKRL--NSGKTSFETQLSGXXXXXXXXRCQGRRRQQSQLADNHNQAMRSPKRRRAGDGASCANRGQRTASVMDTQDHNQHQKQHRPERQHRRTNDLISLLPGQNRQLEVVFLPLRASAKMLECLKSSFSPGTEGIPRLVLRTTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGTIHTERRGNATLFLGNPTFADAEWSLVHIPAPPPKKRLIHSNNADKATATGTTPTSNPARAASGAYVKGRHTGKPGGTDGSGSSGCSSVAGLFNPLVVDDPSVFVFGEEGGVLTGVKLPLKSSAACLPEDWNRFE 1264
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A835YLF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF8_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.830e-34 Identity = 103/289 (35.64%), Postives = 138/289 (47.75%), Query Frame = 1
Query: 1 QAFFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMA----------------------FVGAP--PASSPMKIVVDGSPLSLKREALGLDMSGPEPLLSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYMQDAEIDAKEAAKKVDVRLQA-------SHGVGDAK---------------GGW-------VADFGLSYREPVPFQSPFEVQPRQGVVEPRSDGIFKVILPVHMEGVMAARLVADAYWLPAGGGTSS 708
+AF S GRAR AQ+ +RE + L+ GLG A LV P L PWGV E+S+ +NDTPGRY D + FV A P P+K+ V G PLSL+ E+LGL+ S P+LSFG+V GG R ++V+N GT A L W + A D + + V+V+++ S G A+ GG + L+YRE F S F V P V PR + FKV +P H+ MAA L+ADA W+ G +S
Sbjct: 1491 EAFSSGQGRARLAAQLGEREAMFALRRGLGMALLVSPAAVRLAPWGVAELSVACWNDTPGRYFDDIVCRVRTDLPNAAIADGCPPLIPMPFFVSAENAPLKVPVKVEVSGCPLSLRAESLGLNTSCTPPVLSFGDVLAFGGGAARALRVRNSGTQTAELHWSLHPAG-DTGDEGRIVEVKIETAPPLPPDSAAAGGARXXXXXXXXXXXXXXXGGGRSTPQAPLVSLSLAYREQAAFTSAFVVDPPVTRVPPRGEATFKVTIPSHLHQHMAAVLIADATWIAPGSENAS 1778
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: F0YJY4_AURAN (MSP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY4_AURAN) HSP 1 Score: 117 bits (294), Expect = 3.570e-23 Identity = 84/242 (34.71%), Postives = 122/242 (50.41%), Query Frame = 1
Query: 7 FFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLDM-SGPE-PLLSFGEVFVNGGNTF-RVIKVKNEGTLPALLTWYMQDAEIDAKEAAKKVDVRLQASHGVGDAKGGWVADFGLSYREPVPFQSPFEVQPRQGVVEPRSDGIFKVILPV--------HME-----GVMAARLVADAYWL 684
F S GRA + ED VL GG G AF V P G L PWGV+ +++TA+N+ G ++D LE P + P+++ V G PL+L+ E GLD+ + PE P+L+FG++ V + ++V+N G + ALLTW + A + + VDV A+ VG G + + E V + PF V P + V DG F V L H+E G + A +VADA W+
Sbjct: 1686 FTSVGGRAHNAKRRVAAEDSEVLGGGNGVAFSVSPAAGVLVPWGVLVVTVTAYNNMAGLFTDALECDVESVPASRLPIRLSVRGCPLTLRPECAGLDLITSPERPILNFGQMCVGSPQALAKHVRVRNSGPVDALLTWRVVPEGGGAGDEDRAVDV---AARYVG---GDDPVRLTIKWHEQVEYDPPFTVDPPELKVPAHGDGAFVVRLRPDTVAPGSRHLEDAGPSGTVRAMMVADALWV 1921
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A7S2CNM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNM2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.170e-19 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 103 VEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLDMSGPEPL---LSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYMQDAE 429
V P GTLPPWGV E+ +TAFN+ PG YSD LE GAP A +K++V G PLSL + + G+++ P PL L F +V V ++++V+NEG + AL+ W +++ +
Sbjct: 1 VSPAQGTLPPWGVAEVVVTAFNEMPGSYSDDLECHVEGAPLARLNLKMMVKGCPLSLVKGSAGVEVV-PPPLPSWLRFSDVLVGSPEVTKLVRVRNEGPIGALVNWTVREPD 111
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A2R5GNA6_9STRA (Deleted in lung and esophageal cancer protein 1 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNA6_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.080e-18 Identity = 73/240 (30.42%), Postives = 103/240 (42.92%), Query Frame = 1
Query: 7 FFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLDMSGPEPLLSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYM------------QDAEIDAKEAAKKVDVRLQASHGVGDAKGGWVADFGLSYREPVPFQSPFEVQPRQGVVEPRSDGIFKVIL--PVHMEGVMAARLVADAYWL 684
+ S GR +A+V ED VL G G AFL P+ G L PW V I + FN+ PGRY +L G P+ +P+K V GSPL L +GL E L FG V ++VIKV N G + A ++W + D + A+ +D R+ L + PF V+P + P + G F+V E +AA ++ADA W+
Sbjct: 176 YASKSGRKYIEAKVQAFEDREVLSAGRGVAFLALPKTGMLRPWQAVIIDVYCFNNMPGRYRSELHCLVDGLNPSVAPIKASVQGSPLCLASNTVGLVKRQGESRLHFGHPLVGTEPVYKVIKVSNNGPVAAKVSWRVVAKRGPKADLLETSIAFDEHKMAEDIDARVHVK---------------LRPHADLSKAPPFVVEPHTLQIRPYASGSFRVTFFPDSAEEAEVAAIMIADADWV 400
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A7S2AJL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJL7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.040e-13 Identity = 48/152 (31.58%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 175 PGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLD-MSGPEPLLSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYMQDAEIDAKEAAKKVDVRLQASHGVGDAKGGWVADFGLSYREPVPFQSPFEVQPRQGVVEPRSDGIFKVIL 627
PG +SD+LE GAP A +K+ + G PLSL +E +G+D M+G P L FG+V V + ++++++NEG + AL+ W ++D +D +KVDV + + + E + +P++V P ++ P +D F V+L
Sbjct: 2 PGAHSDELECVIEGAPLARLNLKMQITGCPLSLVKENVGIDVMTGDVPWLRFGDVVVGSPDVTKLLRIRNEGPISALVNWQVKDL-LDVGSEDRKVDVLFEPTADPFKQP----IQLKIRIHETKHYDAPYQVSPVSQLIPPHADAKFNVVL 148
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A0N7L3F5_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3F5_PLAHL) HSP 1 Score: 81.6 bits (200), Expect = 4.970e-12 Identity = 78/322 (24.22%), Postives = 128/322 (39.75%), Query Frame = 1
Query: 7 FFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYSDKLEMAFVGAPPASSPMKIVVDGSPLSLKREALGLDMSGP---------EPLLSFGEVFVNGGNTFRVIKVKNEGTLPALLTWYMQDAEIDAKEAAKKVDVRLQASHGVGDAKGGWVADFGLSYR---EPVPFQS----PFEVQPRQGVVEPRSDGIFKVIL--PVHMEGVMAARLVADAYWLPAGGGTSSRACRSL-------GIVHEETENRKCTILTVTHRDRARVDFAVHKP----EMISSLAQKKISTVERGPGDS 885
+ S+ GR + +V++ E +L+ G AF + P ++PPW + I FN+ PG Y D + GA P + V GSPL+ KR +GL + P P L FG V V + + V N G A L W + ++ + +E +V +R+ DF P S PF ++P+ +V S F++ P + G L+ADA+W + + ++ + E + + + H+ R AV K M ++L +K + R PG S
Sbjct: 1331 YQSSSGRKYLRQRVEEDEARQILRDNRGVAFDISPSSVSIPPWEQQVVQILCFNNMPGTYVDDIICRATGALPIILHTHVNVVGSPLTFKRNCVGLYFNKPLIEDNPVNSRPTLKFGAVCVRSNAITKTLSVINRGPQQARLVWKLVESGSEDQEV--RVTLRV---------------DFASKLHLQITPCDHDSQAILPFTIEPKTAMVPAFSLVPFRITFQPPSNTLGPSRIVLLADAHWYDPKNEDTKHSDTNIKSNATLSDVASSENSQLDASSINLKHQSNNRRATAVGKAFAVVRMANALGRKSGPVMGRAPGSS 1635
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A5D6YPA6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YPA6_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.490e-11 Identity = 88/320 (27.50%), Postives = 130/320 (40.62%), Query Frame = 1
Query: 1435 LKFEVWSTRAGASSPWAAHPTMRRQARIHPRTIWGGGGTLISHISLSNMLTIPVSFRAETLGPFAINPAPSKKRLTKHGGTASGKTDPTATKRTRKRGEMAETTVASKLATLLPGQTLQLELVFLPARASNEMAAAIHSSF-APG--SEDIPNLTLRAEGELNISFLTGHSQTIWLRGEVTRPMITVAPATHTFGSIHAELSGNATLYLGNPTRTDAEWSLSHVPAPPPKHRLSDNITSSSGVNSAPYSPTRGSRNGAXXXXXXXXXXXXXXSAKPATARVAIDDPSVFVFGEESGVAAGAKLPLASSAACLPEDWNRLD 2385
+KF WST +SP AA RQ +S N L+ V+FR E++GPFA+ A S KH S P A +R + GE + L TL P ++++L F P R + +A A+ +S A G + P L+ G+L I F QT+ L ++ P + V+P+ + FG +H S L + NPT A ++++HVP P P + + + + A DDPSVF F +GV AG L S+ LP + D
Sbjct: 1752 IKFTTWSTVV--ASPNAAAHAFHRQ-----------------ELSFVNRLSTRVTFRLESVGPFAVVRADSL--APKH--PLSSADLPPAHRRAQ--GE-------AFLFTLPPHMAVRVDLRFDPTRIGSAVAPALTASGRATGVVPQPPPRLSAHVAGQLLIKFTNRSVQTVALGTDILWPRVVVSPSVYFFGHVHVSQSRAVVLRVANPTVVPAAFAVAHVPLPTPVSKAQQHEFARHHAHYA-------------------------------------DDPSVFTFSATTGVVAGPTTSLQSAGGALPAATSTRD 2002
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A6G0X5N2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5N2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.170e-10 Identity = 80/313 (25.56%), Postives = 119/313 (38.02%), Query Frame = 1
Query: 1435 LKFEVWSTRAGASSPWAAHPTMRRQARIHPRTIWGGGGTLISHISLSNMLTIPVSFRAETLGP-FAINPAPSKKRLTKHGGTASGKTDP-TATKRTRKRGEMAETTVASKLATLLPGQTLQLELVFLPARASNEMAAAIHSSFAPGSEDIPNLTLRA-EGELNISFLTGHSQTIWLRGEVTRPMITVAPATHTFGSIHAELSGNATLYLGNPTRTDAEWSLSHVPAPPPKHRLSDNITSSSGVNSAPYSPTRGSRNGAXXXXXXXXXXXXXXSAKPATARVAIDDPSVFVFGEESGVAAGAKLPLASSAACLP 2364
L F W+T AAHPT I L N L +SFR ET G F+I A T SG P +A+ + + + TL PGQ++Q+++ F N+ A G + + ++ G+L++ + G +QTI L+G V RP + +AP+ FG +H S N T+YL NPT DA +++ HV P + + DDP+VF +GV G LPL +S+A +P
Sbjct: 1394 LIFTTWATHD------AAHPTR------------------FQTIQLVNRLGTKLSFRLETTGAAFSIKEA-----------TTSGSHHPLSASNLPSTQRSLTFNQYPTPSFTLAPGQSVQVQVHFQAPDHDNDEAPL------DGRRRLNSSMVQVTNGQLDVRYSQGSTQTIALQGRVLRPRVVLAPSQFKFGRVHCTQSTNVTIYLSNPTEVDARFAVQHV---------------------------------------------------PQVSTLTTDDPAVFHMAIRNGVVRGPSLPLYTSSALVP 1614
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Match: A0A7S2AIB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIB4_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.040e-7 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 7 FFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEISITAFNDTPGRYS 189
+FS GRA ++ +ED L+ G G AF V P G L PWGVVE+++TAFN+ PG YS
Sbjct: 205 YFSDKGRAHILRRLHAKEDQKKLQAGHGVAFDVSPATGILEPWGVVEVTVTAFNEMPGAYS 265 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig934.17386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig934.17386.1 >prot_S-dermatodea_contig934.17386.1 ID=prot_S-dermatodea_contig934.17386.1|Name=mRNA_S-dermatodea_contig934.17386.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=795bp QAFFSADGRARTKAQVDQREDCYVLKGGLGAAFLVEPEMGTLPPWGVVEIback to top mRNA from alignment at S-dermatodea_contig934:1327..23559- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig934.17386.1 ID=mRNA_S-dermatodea_contig934.17386.1|Name=mRNA_S-dermatodea_contig934.17386.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=22233bp|location=Sequence derived from alignment at S-dermatodea_contig934:1327..23559- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig934:1327..23559- >mRNA_S-dermatodea_contig934.17386.1 ID=mRNA_S-dermatodea_contig934.17386.1|Name=mRNA_S-dermatodea_contig934.17386.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4770bp|location=Sequence derived from alignment at S-dermatodea_contig934:1327..23559- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |