mRNA_S-dermatodea_contig9326.17375.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: D8LMB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB5_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 1.120e-133 Identity = 187/235 (79.57%), Postives = 212/235 (90.21%), Query Frame = 1
Query: 1 PALVSQALSSFAHGVMLPGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGDGRKLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAALK 705
P +ALSSF HG+MLPG +L+N++VL+DEE GLATMLC HQ+HLM+ WPMPGTDDDKKHAFFKQ VQTLHDTYPA+GGLATYI+RA++LL ASQ+GSNPLSGWK SVPEGQRLELG+E YD LE++GL+QVK+CGFVLVAGGLGERLGYGDIKLRLPSE+CTMTTYLQLYI QILHLQ+ YGDGRK PL IMVSDDT DRT+EMLEQGGWFGMEE Q+TLMKQEKVAA++
Sbjct: 13 PKSTGEALSSFKHGLMLPGAILNNSSVLNDEECGLATMLCEQHQAHLMDGWPMPGTDDDKKHAFFKQ---VQTLHDTYPAQGGLATYIERAKDLLTASQEGSNPLSGWKPSVPEGQRLELGSEHYDALEKEGLDQVKHCGFVLVAGGLGERLGYGDIKLRLPSESCTMTTYLQLYIGQILHLQARYGDGRKFPLAIMVSDDTRDRTQEMLEQGGWFGMEEGQITLMKQEKVAAIQ 244
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A6H5K5T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T5_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 2.790e-130 Identity = 186/235 (79.15%), Postives = 211/235 (89.79%), Query Frame = 1
Query: 1 PALVSQALSSFAHGVMLPGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGDGRKLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAALK 705
P +ALSSF HGVMLPG +L+N++VL+DEE GLATMLC HQ+HLM+ WPMPGTDDDKKHAFFKQ VQTLHDTYP +GGLATYI+RA++LL ASQ+G NPLSGWK SVP+GQRLELG+E YD LE++GL+QVK+CGFVLVAGGLGERLGYGDIKLRLPSE+CTMTTYLQLYI QILHLQ+ YGDGRKLPL IMVSDDT DRT+EMLEQG WFGMEEDQ+TLMKQEKVAA++
Sbjct: 13 PKSTGEALSSFKHGVMLPGAILNNSSVLNDEECGLATMLCEQHQAHLMDGWPMPGTDDDKKHAFFKQ---VQTLHDTYPVQGGLATYIERAKDLLTASQEGRNPLSGWKPSVPDGQRLELGSEHYDALEKEGLDQVKHCGFVLVAGGLGERLGYGDIKLRLPSESCTMTTYLQLYIGQILHLQARYGDGRKLPLAIMVSDDTRDRTQEMLEQGDWFGMEEDQITLMKQEKVAAIQ 244
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A836CL41_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL41_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.340e-83 Identity = 137/233 (58.80%), Postives = 168/233 (72.10%), Query Frame = 1
Query: 7 LVSQALSSFAHGVMLPGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGDGRKLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAALK 705
+ SQ ++F++GV+LPG V+DN +LSDEE GLAT+L Q HLM WPMPGTDDD K F +QA LH+T P EGG+ Y RAR+LLA S +G NPL GW SVPEG LE G+ +Y +LEE+G +V CGFVLVAGGLGERLGYGDIKL+LP+E CT T+YL LY QI LQ+ YG+GR LPL IMVSDDT D+T L+ FG++ QVTL+KQEKV A++
Sbjct: 1 MASQGFTNFSYGVLLPGPVMDNKGILSDEEFGLATVLQEAGQGHLMAQWPMPGTDDDLKRKFLQQAKH---LHETSPGEGGIIGYASRARKLLADSAEGVNPLDGWSPSVPEGVALEPGSARYAELEEKGGGEVGACGFVLVAGGLGERLGYGDIKLKLPTELCTETSYLTLYCAQIQALQTRYGEGRLLPLAIMVSDDTADKTSAELDAHQHFGLDPKQVTLIKQEKVPAIQ 230
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A7S3M9Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9Y7_9STRA) HSP 1 Score: 205 bits (521), Expect = 8.360e-60 Identity = 106/218 (48.62%), Postives = 146/218 (66.97%), Query Frame = 1
Query: 52 PGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGD-GRKLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAAL 702
P + N ++L+ +E L Q HL W PGT+DD KH F Q ++ L+ +Y GGLA Y+ AR+LLA+++ G NP GW+ VP G +LE TE+Y + E+ G+ ++ +CGFVLVAGGLGERLG+ IK+ LPSET T T+YL+LY QILH+Q+ Y G +LPL IMVSDDT+ +T E+LE +FG+++DQVT++KQ KV AL
Sbjct: 39 PVLLQQNLSILNHDEKNTVKELLTLGQQHLFATWDPPGTNDDLKHGLFVQ---IKELNKSYT--GGLAGYVKNARKLLASAKKGENPFEGWRPEVPTGVKLEPVTEEYVRYEQAGIRELGHCGFVLVAGGLGERLGFSGIKVALPSETVTNTSYLELYCSQILHIQTRYAAAGMQLPLAIMVSDDTITQTTELLEAKNYFGLKKDQVTILKQGKVPAL 251
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A2K3N4U3_TRIPR (UDP-sugar pyrophospharylase-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N4U3_TRIPR) HSP 1 Score: 197 bits (501), Expect = 8.870e-59 Identity = 109/215 (50.70%), Postives = 135/215 (62.79%), Query Frame = 1
Query: 67 DNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGDGR---KLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAAL 702
DN N+LS ++ L L + QSHL N WP PG DD +K AFF Q+ L +YP GGL YI A+ LLA S+ G+NP G+ SVP G+ L G E + K EE G+ + K FVLVAGGLGERLGY IK+ LP+ET T T +LQ YI IL LQ + +G ++P IM SDDT RT E+LE +FGM+ QVTL+KQEKVA L
Sbjct: 3 DNFNLLSPQQQDLVKTLLDNGQSHLFNNWPAPGVDDAEKKAFF---DQLVLLDSSYP--GGLVAYIKNAKRLLADSKAGTNPFDGFTPSVPTGETLAFGDENFIKFEEAGVREAKRAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQHYIESILALQEASSEGESKAQIPFVIMTSDDTHGRTLELLESNSYFGMKPTQVTLLKQEKVACL 212
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A7C9AI26_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AI26_OPUST) HSP 1 Score: 204 bits (519), Expect = 1.740e-58 Identity = 116/217 (53.46%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 70 NNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSY-----GDGRK-LPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAAL 702
N +LS + + LA ML QSHL WP PG DDD+K AFF QV L+ +YP GGLA YI AR+LLA S+ G NP G+ SVP G+ L E++ K EE G+++ K FVLVAGGLGERLGY IK+ LPSETCT T +LQLYI IL LQ + GD +K +P IM SDDT RT E+LE +FGM+ QVTL+KQEKVA L
Sbjct: 28 NLKILSPQHVELAKMLIEMGQSHLFEHWPDPGVDDDQKRAFF---DQVAHLNASYP--GGLAQYIKNARKLLADSKAGKNPFEGFSPSVPSGENLTFADEKFIKYEEAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPSETCTGTCFLQLYIESILALQEASNRGAEGDSQKEIPFAIMTSDDTHARTLELLESNAYFGMKPMQVTLLKQEKVACL 239
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: USP_PEA (UDP-sugar pyrophospharylase n=8 Tax=IRL clade TaxID=2233839 RepID=USP_PEA) HSP 1 Score: 199 bits (507), Expect = 6.630e-57 Identity = 110/216 (50.93%), Postives = 141/216 (65.28%), Query Frame = 1
Query: 67 DNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQ--SSYGDGRK-LPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAALK 705
DN N+LS ++ L ML + Q HL WP PG DDD+K AFF Q+ L +YP GGL YI+ A+ LLA S+ G+NP G+ SVP G+ L+ G E ++K EE G+ + + FVLVAGGLGERLGY IK+ LP+ET T T +LQ YI IL LQ SS G+G+ +P IM SDDT RT ++LE +FGM+ QVTL+KQEKVA L+
Sbjct: 7 DNFNLLSPQQRELVKMLLDNGQDHLFRDWPNPGVDDDEKKAFF---DQLVLLDSSYP--GGLVAYINNAKRLLADSKAGNNPFDGFTPSVPTGETLKFGDENFNKYEEAGVREARRAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQHYIESILALQEASSEGEGQTHIPFVIMTSDDTHGRTLDLLESNSYFGMQPTQVTLLKQEKVACLE 217
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A7S2R0S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0S6_9STRA) HSP 1 Score: 193 bits (491), Expect = 7.890e-57 Identity = 104/214 (48.60%), Postives = 141/214 (65.89%), Query Frame = 1
Query: 76 NVLSDEELGLATMLCAH--HQSHLMNAWPMPGTD--------DDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQSSYGD-GRKLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQ 684
++L+ + LA LCA +Q+HL WPMP DD K +F Q ++++ YP GGL YI ++LLA SQ G NPL GWK S+P+G+ LELGTE++D E GL++V CGFVLVAGGLGERLGYGDIK+ LP+E T T+Y+Q YI IL QS + +KLPL IM S+DT +T ++LE+ +FGME+DQ+T+++Q
Sbjct: 37 SILTPSQQELAKKLCAPPCNQTHLFAHWPMPSVIESASSKAVDDVKRSFMVQ---LESMDAAYP-NGGLTKYIANGKDLLAKSQRGENPLDGWKPSIPQGEILELGTEKFDDFESCGLKEVGRCGFVLVAGGLGERLGYGDIKIGLPTEMATETSYIQFYIETILAFQSKFAQPNQKLPLCIMTSNDTNAKTVQLLEEKNYFGMEKDQITIVQQ 246
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: USP1_SOYBN (UDP-sugar pyrophosphorylase 1 n=17 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=USP1_SOYBN) HSP 1 Score: 199 bits (506), Expect = 9.270e-57 Identity = 112/216 (51.85%), Postives = 139/216 (64.35%), Query Frame = 1
Query: 67 DNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQ--SSYGDGR-KLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAALK 705
DN N+LS ++ L ML + Q HL WP PG DDD K+AFF Q ++ L +YP GGL YI A+ LLA S+ G NP G+ SVP G+ L G E Y K EE G+ + + FVLVAGGLGERLGY IKL LP+ET T T ++Q YI IL LQ SS G+ + ++PL IM SDDT RT E+LE +FGM+ QVTL+KQEKVA L+
Sbjct: 7 DNFNLLSPQQQELVKMLLDNGQEHLFRDWPAPGVDDDHKNAFFDQLTR---LDSSYP--GGLEAYITNAKRLLADSKAGRNPFDGFTPSVPTGETLAFGDENYIKFEEAGVLEARKAAFVLVAGGLGERLGYSGIKLALPAETTTRTCFVQNYIESILALQEASSQGESQTQIPLVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLE 217
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Match: A0A1J7HPC5_LUPAN (Uncharacterized protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A1J7HPC5_LUPAN) HSP 1 Score: 199 bits (505), Expect = 1.300e-56 Identity = 110/221 (49.77%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 49 LPGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAWPMPGTDDDKKHAFFKQASQVQTLHDTYPAEGGLATYIDRARELLAASQDGSNPLSGWKASVPEGQRLELGTEQYDKLEEQGLEQVKYCGFVLVAGGLGERLGYGDIKLRLPSETCTMTTYLQLYIRQILHLQ--SSYGDGR-KLPLTIMVSDDTLDRTREMLEQGGWFGMEEDQVTLMKQEKVAAL 702
+ T+ N N+LS ++ +A ML + QSHL WP PG DDD+K +FF Q+ L +YP GGL YI A+ LLA S+ G NP G+ SVP G+ L G E + K E++G+++ + FVLVAGGLGERLGY IK+ LP+ET T T +LQ YI IL LQ SS G+ + ++PL IM SDDT RT E+LE +FGM+ QVTL+KQEKVA L
Sbjct: 1 MASTLTHNFNILSPQQQDVAKMLLENGQSHLFKDWPAPGIDDDQKKSFF---DQIIRLDSSYP--GGLEAYIKNAKRLLADSKAGVNPFDGFTPSVPTGETLTFGEENFIKFEDRGVQEARKAAFVLVAGGLGERLGYSGIKVALPAETTTGTCFLQNYIESILALQEASSQGESQTRIPLAIMTSDDTHGRTLELLELNSYFGMQPTQVTLLKQEKVACL 216 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9326.17375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9326.17375.1 >prot_S-dermatodea_contig9326.17375.1 ID=prot_S-dermatodea_contig9326.17375.1|Name=mRNA_S-dermatodea_contig9326.17375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=235bp PALVSQALSSFAHGVMLPGTVLDNNNVLSDEELGLATMLCAHHQSHLMNAback to top mRNA from alignment at S-dermatodea_contig9326:792..8693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9326.17375.1 ID=mRNA_S-dermatodea_contig9326.17375.1|Name=mRNA_S-dermatodea_contig9326.17375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7902bp|location=Sequence derived from alignment at S-dermatodea_contig9326:792..8693- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9326:792..8693- >mRNA_S-dermatodea_contig9326.17375.1 ID=mRNA_S-dermatodea_contig9326.17375.1|Name=mRNA_S-dermatodea_contig9326.17375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at S-dermatodea_contig9326:792..8693- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |