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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1592 |
| Cds size | 948 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622925400.1809015-UTR-S-dermatodea_contig931:15317..15960 | 1622925400.1809015-UTR-S-dermatodea_contig931:15317..15960 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig931 15318..15960 + |
| 1694079907.9009354-UTR-S-dermatodea_contig931:15317..15960 | 1694079907.9009354-UTR-S-dermatodea_contig931:15317..15960 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig931 15318..15960 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig931.17364.1 >prot_S-dermatodea_contig931.17364.1 ID=prot_S-dermatodea_contig931.17364.1|Name=mRNA_S-dermatodea_contig931.17364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=316bp
AAHNLGEDDRATSREPKRLTRSGCGRDDVRDLPIDTCVAAAKPAQVIPTQ
GIARTDTAEGKVTASTRITASVDHALARCGGGERDDAVDGDALITSPFAG
AERIVSTLPSQGRRHIRKSCASDLQDLRKIASLKKAKREAVVEVNNLLAE
VEELKKQVADAAVDRAHAVDEATGKVEEKYTEISQALRDELGAASRVSKD
SKGALEAACKERKAFRQQIQAQVAVAASKIKAEAAKTEKVKEDFQQCMNA
LRAELTATSAGWENTNDDLKQKGQERDPPLKKAQTRYMIDTVASGPVDVM
EEEGYADDHMELDEL* back to topmRNA from alignment at S-dermatodea_contig931:9208..15960+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig931.17364.1 ID=mRNA_S-dermatodea_contig931.17364.1|Name=mRNA_S-dermatodea_contig931.17364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6753bp|location=Sequence derived from alignment at S-dermatodea_contig931:9208..15960+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAGCGCACAACCTTGGCGAGGACGACAGGGCTACGTCGCGGGAACCCAA
ACGATTAACGCGCTCCGGATGCGGGAGAGACGATGTGCGTGATCTCCCAA
TCGACACATGTGTGGCTGCTGCGAAGCCAGCTCAAGTGATTCCTACCCAA
GGCATCGCACGCACTGACACCGCAGAGGGAAAGGTGACTGCATCAACACG
GATCACGGCGTCGGTGGACCATGCTCTAGCACGTTGTGGTGGCGGAGAGC
GGGACGACGCCGTGGACGGGGACGCTTTGATCACATCGCCGTTTGCAGGC
GCCGAACGAATTGTCTCCACTCTCCCGAGCCAGGGGCGTCGCCATATTCG
CAAGTCTTGTGCCTCTGACCTTCAAGACCTGCGCAAGATTGCGTCATTGA
AGAAAGCAAAACGAGAGGCGGTAGTCGAGGTGTGTCGCAAACGATTGATG
ATGGGCGGGAGTACGTCAACTTATCGATTTCCTAGGGTTGGGGACTGGAC
CAGTGCGTACTGGCAGTGTACTGGTACTGGCCAATACCTAAGAGTTGGTC
GAGGGGGCTGCCAGTACCAGTACATGCCCTACTACTTATGTGCCAGTACA
TACACCACTACATACAATACCACATCGCACCTCAGTACTAAACGGAAACA
CATCCAATTGCCCCGGGCCGCGTTGAGAGAGAGAGAGAGAGACCACACAG
ACGCACACACGCTTAGGAAACAATTACTCAGTGTATATGTCGACGCGATT
CCGGAGCTAGTCGGCACCGCACCTTGTCTGTTGTGTACGATTTGGATTGT
TGGGTTCGTATTCAGTGTTTGCCCCCGAGTTAATGCCTCTACTCTACACA
TGGCCTATAATAACTATATATGTATCGTCTCATGATGCCAAATCACGTCC
AAACGCGCCTCCAGCGGGCCCTCCGGGGGCTCCTCCGGCGGGGTGCGGCT
TCGCCGCGAGCAGAGTACTCGTAGGATATTGTAGATTTGCTGCTGACGAA
GCCAGTACTCCAGAGACCGGCTGGCCGCGCCGCTACCCAACCCTATGTTT
TCATGCATCTCTTGCGCTATAGAAAATACCAGGGACGGAACTCTATATTG
TAGAAGTAGATATCTTATCAGTTATTTTCTCCTTGACGGTTTGCACATCT
GACCTCAAGTCGTGTCGGATTAAGCCAATCGGCTATACGTGTGCCAATCA
ATAAATCAATCAGGCAATCATATCAGCACAGGGACGGTAATAGCTGGCGC
TAACAAAAAAACAGGTGGTTGTTCTAGCTGGGAAATACAACGATCTGTAG
CACACGTAGTGGCCTCGGTCTGTGCAGTTCACGCCACGATCGATAGTCGA
CTAAAGCAGAATCATGTTATGGTCAACCGTGGGTCGTTTTGGGTACTTTG
TTTTCTTTTTTTTTCCCACGCTCGTCTCCACTAAGGCTCTCGCACCCGTG
GTTTGCGGCTACGATAGCTGCAAATTGCTCTCTGCGACAATCGACTCGAT
TGTCATAATATTCCAGTTCCCCGTGAGCGATATGTTAATTGTGAGCGGCT
TGTGTTGTCGCAGCGTGGGCGATGATCAGGTGTGAGGCACACAGTTTGAA
GACACTACACCACACTTTGGGCTACACTCTGTATTTACATATCAGGCAGG
AGAAACGTACAGTTGCAATTATTTTTTAATGTTAATCTCTATATAGTCTA
CGGCATAACTTGACGCGTTTCGATTCCTAGTCTTCCTATCCCTTGGAAAT
GTTTACTCTGTCGCCATGGTTAGCGCCGTAGTAGCAAATTTTAAATATCG
TGTTTCACTGCGTGCCTGCGTGCCCCCTGATACCCCACAACTCGATCGTT
TAAGGTGAACAATCTTCTGGCCGAGGTGGAGGAGCTCAAAAAGCAGGTGG
CCGATGCCGCTGTCGACAGGGCCCATGCGGTGGATGAAGCAACAGGAAAG
GTCGAGGAAAAATACACCGAAATTTCTCAGGTGTGCGTACATTCACCACA
CTACGGACGATGCCTACTTATGATCCTTATTTGAAGGTTGTGTCATACAG
GCGGCCATGTTGTCGCCTTGAACTCTTGAGCGGACGGTGACTGCTGTCCC
AACATATTTTGTTTTCCCTCCGATACTTGCTGCTGGCTGACCGGGTTTGC
GCAGGCCCTCCGAGATGAGCTCGGTGCGGCGTCGCGAGTTTCGAAGGACA
GCAAAGGCGCCCTTGAGGCCGCGTGCAAGGAACGGAAAGCGTTTCGGCAG
CAGGTGCGGAAATACTTTTTTAGGTACCATTGATGTTGTTTTGTTGAATC
TCCTCTACCGCCCATCTGTCGCGCGCGTGTGGCAGGATGGTGCTGCTGTG
TTTTTCGGTGAAGAAGCGCCCCTCGTGGTGCGGTAGTTGTTTTTCGCTAC
TTTAGTTGTTCAGCTTTGTGCGTCGCGGGGCAAGATGTGTCTCTTGTGGT
TTGATCCAGGGCCGGTGGGTCGCCTTTTCAAACGAGGGTTGGAAAAGTTT
GCCGAAGCTTCGGGTGTTCCCATGTGGGAGGATTGTCCGCGTCATGGCCG
GTTTGACGCGTCAAACAGCTCACTACGAGGCGAGCTAAACTGGGTCATAC
CTCGTTGTGTGACAGCGAGTGCTGATCGACGTGAGGCTTGATTAACCCGC
AGAAAGTTTAAATGCAGCAAGCTGTCCAGATATTTACTGCTTGCATGTAG
TTATGGTGCTCACCTGAGTCATGCCCAGCCCGACATAAACTATGGGGTAT
ACCTCTGCGTTGATATGCGTGTGGCCGTATTGTCGATACAAGGGTAGTTA
TTCTTCAGCCCTGCTGCCTTTGCATTTTGTTGTGTCCACACATACACGTT
TTACGTGCTTTGCTTCCACATGGTGTTTGCGTTTTTTCTGATTGGGACCC
TCAAGGGTGGTGTGATATTTAATGGCGTTTGTCCTTTCGCCGTTTACCTG
AGAATGGCACTATCCACCACTTACAGGCAATTGTATCGAATCCTTTGCCA
GTATTCTACTTCGCGGTTTATCTCGTTTTTTTGTTATCGAGTGTGGTGAT
TTTTGGCCCCGAAATTCTTCGGTGTTTGAGTTTGCTATCACGGCTGGTGT
ACGTGACCAGTCAACTCAATAATATCAATCGCAATGACTGCTGTAGAGAT
TACTACAGTGTGAGCTTCGTTTGGTCAAGCAAATTGGCGTCGTTTTCAAT
TGTAATTGTGCATGCGATCCTCGTTTTGGAATTTGTTTGTTTTCTTCCTT
TGACACTTTGTTCTACTTGATAAAATGTTACGAAGATCCAGGCACAGGTA
GCCGTTGCCGCTAGCAAGATCAAGGCTGAGGCAGCCAAGACGGAGAAGGT
CAAAGAAGACTTCCAGCAATGTATGAATGTAAGACAGCGCCATTGGGCAT
GCTTTCATGTAGTTTTCCGTCATGTCTATATTTTTCCTTCAATGGCCGAA
CTACATAGCCAGGCACCATCGGGTCGAGGGGTTCGATGCCACGTTCTGGC
CAAATGCCGTGCCTCCTCTCTTCTGCCTTAACCCTACACCCTTCGCCACT
TGTGTTTATGTATTTGTTTATATATTTTGCCGTTCCAGTCGTAGCAGCAT
CGGCCGTACTGAACTATTGTGATAATTATGGCGATTCCGATTGTTGTCCG
CTTTTTTTTCGTTTACGTTATTTTCTCTTCCGTTTATCCCGCAGCCTTTA
TACGCAGGAGTAAATGCATGGTATTGTTAAGTTCTTCCGTGAGTATGCGT
ATAGCGGACCACGCATCTCATCAGGTGTCGGGTCTGACTTAGCCAATCAT
CTACGTGTAGTGTGGAAGTCATCCCCATTCTCCCACAAGGGCGCTCGTTC
CGCAGCTCTCAGTGCCGGTCGTGTCATGCCGGGCAGTACTTGTTGCCCGC
CGACGTAGTCTCTCGAAAGGGCTAATTGTGCTGGCACTTTCGTGCCTACC
GGAAATGACCACGCAGGCATTGCGTGCCGAGCTTACCGCGACGTCGGCGG
GTTGGGAGAACACCAATGACGACCTCAAACAGAAAGGCCAGGAACGGGAC
CCCCCTCTCAAAAAGGTGCAGCGGGGTCTTTTGGAAGGGTGCCGTCATTG
TAGCATGTGCTCTCAGCAGGTGTTGTGCTAGCTATGTTCGGAGGGGGCAA
CTCCTTCATACAAAACACGGGTGGTGTTTTCTGGGCGCCTACTGAGGTTG
ACTCATTTTTTTTTCCCCTAAATCACAATATTTTTACTACATTGCAAGGA
AGATGCGAAACAAGAAAGACTGCTCCTACTCAGATCAAAATCGGAACCTG
GAGCATGTCAAAGAGCCCTTACCCTGAGCGAAGTGTAATCTAGTTTAAGG
ACCAATCAGGAGTGATTCTATATGACCGCCTGTTTCTCATATTCTTCTCC
GGACTTTTGTTGCAGAGAAGAAAACTCAAATGTATATTTTACGATTGAAG
GTTTCTCTGACAGTAGTTACTTTTCCCAATTACAGGAGGAAAACGTGTGT
GAATTTTTACAAATTCTTTCTCGAGAAAAATCCTGCAAAATGCTCACATT
ACCCGAATAATCGTTTTTCGACTACATTAATATCAACCTTTCAACGTAAA
CAAACGATAAAACGCGCAGGTTTGATTGCTTCACGTGCAACAGACCTACG
CGTAACACCATGCGGCTCCGTAGGGGAACGAGGATGAATCATAGTGACAT
AATACGTGCGATTATCGCGCCGGTCGCCTTGCGGGCTCACTATGTTCACC
GATGAAGCGGCAGGGTTTTCGCTACTGCTGCAATACCCCACGATAACTGC
AGTGGCCGCGACGTGACGATCTTGCCCACGATTTTTACTCGTGGACACAA
ACATCCTCTCTGAGCGCCTCCGCACGCCCGCACCGATCAATCTCGGAAAA
TGCACGAAGGCTCGACGAGGTGAAAAATCAGATCAGATGCCAGAGATTGG
CGTCTCGCGCTCTCTATCAAGTGTAAGTATCGCAACTAAACGGTCTCTTT
CGTGCCCTCCTCTCCTTTGCTTTTGCTGCCTCGATCATTACGAACTCGAC
GTCCTCGTATACGTGCCGGGGTACGCTGCCTCGCTTGGGATATGTAGCGT
GCGTGTCTTAGTCAGGCACCAGCCAACAGCCCCAATATTGTGTTTTTCCT
ATTCGGGCATAACTTCGCCAAGAGAGCGATCCGAAACCGTTTCCCTCCTG
ACATGTACTTATGTTTTTCGACGTGGTTTTCTTTCTCCACGCAAAATGGC
ATCACAAGAGTGTGGTCAGAAATTATGCACTTCGAATCCCGCAGATCGTA
ACTGAAAGCTTTGTTTTACTTGGGCGTAGCGTGCGGTTTTGTGCCTGAAA
ATTAGAATGCTGATTCCCCTATGGGGTTCCAAACTATTGCTGCGTGTGGG
AGCTATTTGTTGGTTTATACAAAGAGCCAAGAGGCCGACTACGTTATTAT
TATTGATCGTGTCTTGTTTTCATACGATGTACGCAGGACCGACCCAATAT
GTTGCTCAATGGCTTCACTTCGCACCTATCTCTGACACCTCTTTCTGTCT
TTCTGGTTTAAGTGAAGCCTGGGGCACAGGTGGTTTTCGATGCGGACATT
GCCTCCAAAGTTGCGCCAATCTTGAAGGCCTTAGGGCATCAAATAAAGAG
TGTCGAGTGTAGACCCGGTACAGCGGTTCAGGCACGTTTTTGGTAAGCGG
TGTTTAAATGTAGTTTTGATGATTGTTTTGAAACGTTTCTTGTGCTGATA
GAATGGCGACCACTTCCTCAAAAGCAACCAAGCATACAACACGACGCAAG
GGTTGATGCTGCCTACAAGCAACGCATTGTAGCCGGCCATCGGGTTGATC
CATTCGCGAAGACGTCGAAACGTATGCGGGGAGATGTGATGCAATCACGT
AGCGTAGCCATCCGTTTCTTTACCCCACATCTATCACAAAATGGCTGAAA
ATAGCTTTGGCATGAGCTATACACACGTTTTGCCGCCTTTCGATTACGCC
TTCCTCAGGCCCAGACGAGATACATGATAGACACGGTAGCTTCAGGACCA
GTGGACGTGATGGAAGAGGAAGGATACGCGGACGACCACATGGAATTAGA
CGAACTCTAAAATTGGGGGGCGGGGTAGGAGGCTGTGTCACACCTTGTAT
CTGTAGATATAGCGACGGCAGGGATCAAGCCCAAGGGTTAGAGGGTGATA
CCGTTTGTGACCTCTTGTGAGCGTTTTTTTTTCCATCGTTGATGCAAACG
GCATTATCGCCGTGGCGGGACCGTATCCAATGTTATGCCACGATGCTGAT
CGTCTAATGGAAGCGTGTTGATTCAACCAGATTTGTGCCTGTTTTGCCCG
GCGGGAGTATTTGATCGAACAACGTTTTTGGGGCGTGTATCTCGCGTTAA
CGATGCGACGATCCTGTTTCGAGACAGTTTGGGCGATTGATATTTCTCTA
GCAAGTTATAGCGAGGGGAAAAATACGTTGGGGAGGTCGGGGGTCTCCGG
CAAACCAGGAAGCGCAAAAACAGTAAGGATTACAACCTTGCGGGTTTATG
AAACAACCCGCTGTATGTTTTCCAAGTCCAGCAAAAATCCACCTTCCAGA
AGGTCTCTTGAGCTGACCACGACACCTCTTTTCTCAAGATGCGGCGCGAA
TTCAGTACTCTACGTACGATACATTTACGTCTCCACGCGGTGGACAACTT
TTGCGTTTGTCTGCTGCATGCGGTAGTACTTGTGAACATTTGATTTCTGT
AAC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig931:9208..15960+ >mRNA_S-dermatodea_contig931.17364.1 ID=mRNA_S-dermatodea_contig931.17364.1|Name=mRNA_S-dermatodea_contig931.17364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at S-dermatodea_contig931:9208..15960+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAGCGCACAACCTTGGCGAGGACGACAGGGCTACGTCGCGGGAACCCAA
ACGATTAACGCGCTCCGGATGCGGGAGAGACGATGTGCGTGATCTCCCAA
TCGACACATGTGTGGCTGCTGCGAAGCCAGCTCAAGTGATTCCTACCCAA
GGCATCGCACGCACTGACACCGCAGAGGGAAAGGTGACTGCATCAACACG
GATCACGGCGTCGGTGGACCATGCTCTAGCACGTTGTGGTGGCGGAGAGC
GGGACGACGCCGTGGACGGGGACGCTTTGATCACATCGCCGTTTGCAGGC
GCCGAACGAATTGTCTCCACTCTCCCGAGCCAGGGGCGTCGCCATATTCG
CAAGTCTTGTGCCTCTGACCTTCAAGACCTGCGCAAGATTGCGTCATTGA
AGAAAGCAAAACGAGAGGCGGTAGTCGAGGCAGCGCACAACCTTGGCGAG
GACGACAGGGCTACGTCGCGGGAACCCAAACGATTAACGCGCTCCGGATG
CGGGAGAGACGATGTGCGTGATCTCCCAATCGACACATGTGTGGCTGCTG
CGAAGCCAGCTCAAGTGATTCCTACCCAAGGCATCGCACGCACTGACACC
GCAGAGGGAAAGGTGACTGCATCAACACGGATCACGGCGTCGGTGGACCA
TGCTCTAGCACGTTGTGGTGGCGGAGAGCGGGACGACGCCGTGGACGGGG
ACGCTTTGATCACATCGCCGTTTGCAGGCGCCGAACGAATTGTCTCCACT
CTCCCGAGCCAGGGGCGTCGCCATATTCGCAAGTCTTGTGCCTCTGACCT
TCAAGACCTGCGCAAGATTGCGTCATTGAAGAAAGCAAAACGAGAGGCGG
TAGTCGAGGTGAACAATCTTCTGGCCGAGGTGGAGGAGCTCAAAAAGCAG
GTGGCCGATGCCGCTGTCGACAGGGCCCATGCGGTGGATGAAGCAACAGG
AAAGGTCGAGGAAAAATACACCGAAATTTCTCAGGTGAACAATCTTCTGG
CCGAGGTGGAGGAGCTCAAAAAGCAGGTGGCCGATGCCGCTGTCGACAGG
GCCCATGCGGTGGATGAAGCAACAGGAAAGGTCGAGGAAAAATACACCGA
AATTTCTCAGGCCCTCCGAGATGAGCTCGGTGCGGCGTCGCGAGTTTCGA
AGGACAGCAAAGGCGCCCTTGAGGCCGCGTGCAAGGAACGGAAAGCGTTT
CGGCAGCAGGCCCTCCGAGATGAGCTCGGTGCGGCGTCGCGAGTTTCGAA
GGACAGCAAAGGCGCCCTTGAGGCCGCGTGCAAGGAACGGAAAGCGTTTC
GGCAGCAGATCCAGGCACAGGTAGCCGTTGCCGCTAGCAAGATCAAGGCT
GAGGCAGCCAAGACGGAGAAGGTCAAAGAAGACTTCCAGCAATGTATGAA
TATCCAGGCACAGGTAGCCGTTGCCGCTAGCAAGATCAAGGCTGAGGCAG
CCAAGACGGAGAAGGTCAAAGAAGACTTCCAGCAATGTATGAATGCATTG
CGTGCCGAGCTTACCGCGACGTCGGCGGGTTGGGAGAACACCAATGACGA
CCTCAAACAGAAAGGCCAGGAACGGGACCCCCCTCTCAAAAAGGCATTGC
GTGCCGAGCTTACCGCGACGTCGGCGGGTTGGGAGAACACCAATGACGAC
CTCAAACAGAAAGGCCAGGAACGGGACCCCCCTCTCAAAAAGGCCCAGAC
GAGATACATGATAGACACGGTAGCTTCAGGACCAGTGGACGTGATGGAAG
AGGAAGGATACGCGGACGACCACATGGAATTAGACGAACTCTAAGCCCAG
ACGAGATACATGATAGACACGGTAGCTTCAGGACCAGTGGACGTGATGGA
AGAGGAAGGATACGCGGACGACCACATGGAATTAGACGAACTCTAA back to top
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