mRNA_S-dermatodea_contig9284.17349.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: D8LHX5_ECTSI (Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX5_ECTSI) HSP 1 Score: 186 bits (473), Expect = 3.740e-55 Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 1
Query: 16 QVCAFVKEVVGADAIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
QVCAFV EVVGADA+VAGNSLGGFTALAAASHAP IKGCVMLNGAGRFRDREQEA+LE +KNAPP+ PFLLAWDEAIK GT++Q A+TRASFYYTKQPARIKQV V+
Sbjct: 217 QVCAFVTEVVGADAVVAGNSLGGFTALAAASHAPNSIKGCVMLNGAGRFRDREQEALLEVQKNAPPRPPFLLAWDEAIKYVGTFVQRAITRASFYYTKQPARIKQVLTQVY 327
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A6U1NRJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NRJ5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.380e-20 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 16 QVCAFVKEVVGAD-----------AIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRF--------RDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVHS 351
Q+ AF++EVVG A+VAGNSLGG+TALA ++ P ++KGC++LN AGRF EQ A EA + PP+ + +A+ G +Q V +ASFYYTKQP RIKQV + V++
Sbjct: 189 QIAAFIREVVGVGMSEEGEGGVERAVVAGNSLGGYTALATSAVYPSLVKGCILLNAAGRFDPPEDVLKAQEEQAATQEAGQAWPPQW-----YKDAVAALGQALQRGVIQASFYYTKQPLRIKQVLSQVYT 314
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A2P6TI17_CHLSO (Chloroplastic isoform X2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TI17_CHLSO) HSP 1 Score: 89.4 bits (220), Expect = 1.570e-18 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 4 IFVSQVCAFVKEVVGAD--AIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
++ Q+ F+KEV+G + ++ GNSLGG+ ALA A+ P+++KG V+LN AGRF + +E+ EA P + W ++ GT ++ A ASF +TKQPARI+QV V+
Sbjct: 183 LWTDQIADFIKEVIGGEEPVVLVGNSLGGYNALATAARNPDLVKGVVLLNAAGRFEEAGEESSEEAAVATPEQQNL---WSGLVEQVGTAVKRAAVFASFVFTKQPARIRQVLGQVY 296
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A7S2UMU3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMU3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.040e-14 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 16 QVCAFVKEVVGADAIVAGNSLGGFTAL--AAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
Q F+ +V+ +AGNS+GGFTAL AA+ A I GC++LN AG+F+D +E I+E KN E +++ + IQ AV SF TKQPARI+QV V+
Sbjct: 157 QAVDFITQVIDKPTTIAGNSIGGFTALYTAASEEAKPFINGCILLNAAGKFKDPTEEIIIEEPKN------------EFVESIMSAIQRAVIAVSFVVTKQPARIEQVLRQVY 257
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: R1DU74_EMIHU (AB hydrolase-1 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DU74_EMIHU) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-14 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 16 QVCAFVKEVVGADA-----IVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAP--PKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
Q AF++EV G A IVAGNS+GG+TALA + P++ G LNGAGRF +EA ++ A ++P +A DEA + T +Q AV + TKQP RIKQV V+
Sbjct: 100 QCAAFLREVAGCGAGGRKAIVAGNSIGGYTALALGAEYPDLCLGIASLNGAGRFSPPPEEAERLRREEAARAERSPVAVAVDEAREYVATSLQRAVAFTGLFVTKQPLRIKQVLRQVY 217
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A5J9UWP1_9POAL (AB hydrolase-1 domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UWP1_9POAL) HSP 1 Score: 77.4 bits (189), Expect = 2.810e-14 Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 4 IFVSQVCAFVKEVVGADAIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAK-KNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
+++ QV F++E+V A++ GNSLGGFT L AA+ APE+++G V+LN AG+F D ++ A E + + + P A F+ +K IQ V F+ +KQPAR+++V V+
Sbjct: 148 VWMEQVSDFLREIVKEPAVLVGNSLGGFTTLFAATEAPELVRGVVLLNSAGQFSDPDKPAPAEEEAEQSNPLAKFI------VKPLKEAIQRVVLGFVFWQSKQPARVEKVLKSVY 257
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A7S1ZKC8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZKC8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.350e-14 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 16 QVCAFVKEVVGADAIVAGNSLGGFTALAAASHAPE----IIKGCVMLNGAGRFRDREQEAILEAKKNAPP-KAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
Q F++EV+G V GNSLGGFTAL AAS + + +I GCV+LN AGRF++ + APP K P + I T I+ AV + SF YTKQPARI+QV V+
Sbjct: 141 QTVDFIEEVIGKTTTVVGNSLGGFTALYAASSSAQSEKSLINGCVLLNAAGRFKNPD----------APPEKEPNAI-----IDAIATLIKRAVIQLSFIYTKQPARIEQVLRQVY 241
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A7S3RCC1_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RCC1_9SPIT) HSP 1 Score: 75.5 bits (184), Expect = 1.280e-13 Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 4 IFVSQVCAFVKEVVGAD-------------AIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAP-----FLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
++V+Q +F++EV A+VAGNS+GG TALA A+ P +++G LNGAGRF E + ++ AP F AW + T G ++ + +F TKQPARI QV V+
Sbjct: 114 LWVTQCASFLREVAACGLVKDGDGRTSVRRAVVAGNSIGGLTALALAASEPSLVRGIASLNGAGRFSPTPAERVQSQRRKGARGAPSPLTGFSTAWSGTVDTVGAALRKILLSGAFVLTKQPARIAQVLRQVY 246
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: A0A7S2HYE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYE7_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.760e-13 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 16 QVCAFVKEVVGADAIVAGNSLGGFTALAAASHAP----EIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQVSAVVH 348
Q F++EV+G V GNSLGGFTAL AAS + +I GC++LN AGRF+D A+ E +KN EA+ A I+ V SF YTKQPARI+QV V+
Sbjct: 147 QTLDFIEEVIGKTTTVVGNSLGGFTALYAASSSAAKTKSLINGCILLNAAGRFKD-PTNAVAETEKNGIV---------EALVGA---IKRFVIHLSFMYTKQPARIEQVLRQVY 248
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Match: E1ZET3_CHLVA (AB hydrolase-1 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZET3_CHLVA) HSP 1 Score: 72.8 bits (177), Expect = 1.390e-12 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 4 IFVSQVCAFVKEVVGAD--AIVAGNSLGGFTALAAASHAPEIIKGCVMLNGAGRFRDREQEAILEAKKNAPPKAPFLLAWDEAIKTAGTYIQLAVTRASFYYTKQPARIKQV 333
++ Q+ F+++V+G D ++ GNSLGG+ AL A+ P++++G V+LN AGRF +++ E A + L W + ++ +V ASF +TKQPARI+QV
Sbjct: 194 LWTEQISDFIRDVIGGDERVVLVGNSLGGYNALETAARQPDLVRGVVLLNAAGRF---DEDGAEEGAAVATEEQQSL--WSRVAEQVTASVKRSVVFASFIFTKQPARIRQV 300 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9284.17349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9284.17349.1 >prot_S-dermatodea_contig9284.17349.1 ID=prot_S-dermatodea_contig9284.17349.1|Name=mRNA_S-dermatodea_contig9284.17349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp MIFVSQVCAFVKEVVGADAIVAGNSLGGFTALAAASHAPEIIKGCVMLNGback to top mRNA from alignment at S-dermatodea_contig9284:420..7106+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9284.17349.1 ID=mRNA_S-dermatodea_contig9284.17349.1|Name=mRNA_S-dermatodea_contig9284.17349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6687bp|location=Sequence derived from alignment at S-dermatodea_contig9284:420..7106+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9284:420..7106+ >mRNA_S-dermatodea_contig9284.17349.1 ID=mRNA_S-dermatodea_contig9284.17349.1|Name=mRNA_S-dermatodea_contig9284.17349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at S-dermatodea_contig9284:420..7106+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |