mRNA_S-dermatodea_contig9225.17290.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9225.17290.1
Unique NamemRNA_S-dermatodea_contig9225.17290.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 4.430e-125
Identity = 188/268 (70.15%), Postives = 209/268 (77.99%), Query Frame = 1
Query:   43 FSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCA-SPL 843
            F+ID+H VTN+QFA F +DSGYVTEAEKF   +A+E               +LD   TIKEADEGIGRVKGSEHWVGV+GANWRQPEGPRSSL+SRG+VPVAQVSWVDA+AYCSWAGRRLPTEAEWEYA+RGG    +E+  +   K W VGN+WQG FP  NS+EDGYAGLAPATAF PN L +YDMLGNAWEWV GG+P RRTLRGGSFVD DP  AEK     + G  G   QP+NHAITP TRMETTQDSGSANTSFRCA SPL
Sbjct:   30 FNIDEHCVTNEQFAIFVKDSGYVTEAEKFGWSFALEY--------------MLDAE-TIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRRLPTEAEWEYAARGGQTLASEHVGDKSTKMWLVGNSWQGHFPNTNSVEDGYAGLAPATAFAPNALEVYDMLGNAWEWVAGGDPTRRTLRGGSFVDFDPVAAEK-----NNGSSGIPRQPANHAITPGTRMETTQDSGSANTSFRCAQSPL 277          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A8J2SID5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SID5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.560e-66
Identity = 121/272 (44.49%), Postives = 154/272 (56.62%), Query Frame = 1
Query:   37 RTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADE--GIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKG----WKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCA 834
            +TF ID   V+ND+F  F   + + TEAEKF   + +E               +L   ATI ++D   G+GRV+ S HW+GV GA WR+PEGP SS+  +G+ PV QVSW DA AYC+WAG+RLP+E EWE A+RGG   L + P   W        K  N W+G FP +N  +DGY G+AP   + PN  G+Y+ +GN WEW  GG P +R LRGGSFVD                    V    NHA+  ATRM+ T DSG  NT FRCA
Sbjct:   91 KTFDIDATVVSNDEFKKFVRATKHETEAEKFRWSFVLE---------------MLASNATINQSDSKHGLGRVQSSPHWLGVYGATWRKPEGPDSSIRGKGNYPVIQVSWNDAVAYCAWAGKRLPSELEWETAARGG---LEDEPF-PWGDRDDDVHKRMNGWEGAFPDENLAKDGYIGVAPVDQYAPNAFGVYNAVGNVWEWCAGGTPEKRPLRGGSFVDT-------------------VDGSHNHALRCATRMDQTADSGGHNTGFRCA 324          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A8J5XF83_DIALT (FGE-sulfatase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF83_DIALT)

HSP 1 Score: 218 bits (555), Expect = 4.030e-65
Identity = 122/265 (46.04%), Postives = 154/265 (58.11%), Query Frame = 1
Query:   43 FSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIK-EADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCA 834
            FSI+   VTN QF AF   +GY T+AE+F  RW+              L+P LD     + +AD G+GR++ + HWVGV GA WRQPEGPRSS+  R D PV   S+ DA A+C+WAGRRLPTE EWE+A+RG  ++    P      G  + N WQG FP  N+  DGYAG  PA A+ PN  G+Y+ +GN WEW  GG+  +R LRGGSFVD            S  GR       +NH +  +TRM+   DSGS N  FRCA
Sbjct:   88 FSIEDAAVTNAQFRAFVRATGYKTDAERF--RWSFA------------LAPFLDAETLARADADGGLGRLRDAPHWVGVAGAYWRQPEGPRSSIRGREDHPVVHASYNDALAFCTWAGRRLPTELEWEFAARG-RINDEPFPWGGDEDGGTL-NGWQGPFPDGNTRADGYAGTCPARAYAPNAYGLYNTVGNVWEWASGGDDKKRPLRGGSFVD------------SVDGR-------TNHPLRVSTRMDNAADSGSFNIGFRCA 317          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A7S2Y1G9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1G9_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.130e-63
Identity = 119/267 (44.57%), Postives = 147/267 (55.06%), Query Frame = 1
Query:   37 RTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCAS 837
            + F +D+H VTN+QF  F  D+GY T+A+KF   W+              L+       TIK AD  +GR++G   W+GV  A W  P GP S +E   D PV QVSW DA AYC WAGRRL  E EWEYA+R G V     P    A   ++ N WQGDFP KN++EDGYAG AP  +F PN  G Y+M+GN WEWV GG   +R L+GGSF+D                    +    NH    +TR  TT DSG+ NT FRCAS
Sbjct:   50 KAFWLDEHAVTNEQFIDFINDTGYETDADKFG--WSFV------------LAYFASEETTIK-ADNDMGRIEGDPSWLGVREATWEHPLGPDSDVEDILDHPVVQVSWNDARAYCKWAGRRLAREKEWEYAARSGLVGQPF-PWGKEATPQQL-NYWQGDFPLKNNVEDGYAGTAPVKSFEPNSFGFYNMVGNVWEWVGGGSKEKRILKGGSFIDS-------------------IDASFNHPALVSTRQLTTADSGNMNTGFRCAS 280          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A7S3YFE4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFE4_HETAK)

HSP 1 Score: 205 bits (522), Expect = 2.790e-61
Identity = 113/277 (40.79%), Postives = 150/277 (54.15%), Query Frame = 1
Query:   37 RTFSIDKHPVTNDQFAAFAED------SGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSL--ESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCASPL 843
            + F I+K  V+N+QF  F ED        Y T+A+KF   + ++             S L        ++DEG+GR++ + HWVGV  ANWR PEG  S +  + + D P   +SW DA AYC WAGRRLP E EWEYA+RGGH  L        A  + + N WQG FP++N+ EDG+A  AP  AF PN  G+Y+ +GN WEWV GG+P  R LRGGSF+D                    +    NH +  ++R   T DSGS NT FRCA+ +
Sbjct:   70 KPFQIEKCAVSNEQFKIFVEDVERTTGKPYQTDADKFGWSFVLD-------------STLSKEQLDFADSDEGMGRIQNAPHWVGVLKANWRHPEGEDSDVFKQDKADHPAIHISWNDAKAYCKWAGRRLPKEREWEYAARGGHDGLPYPWGIPEASPFDM-NYWQGAFPRENTAEDGFATTAPVAAFAPNHFGLYNTVGNTWEWVAGGQPEARVLRGGSFLDS-------------------LDGAFNHPVMTSSRQLNTADSGSYNTGFRCAADV 313          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A7S2SNU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU0_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.240e-58
Identity = 114/269 (42.38%), Postives = 144/269 (53.53%), Query Frame = 1
Query:   37 RTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEAD--EGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCAS 837
            +TFSID   V+N QF  F   + Y T+AEKF   + +E                L    T+   D   G GRVK + HW+ V GA WR+PEGP SSL  R   PV  VS+ DA AYC WAGRRLPTE EWE+A+RGG +     P  S A   ++ N W GDFP  N L DG+ G  P   F PN+ G+Y+M+GN WEWV+ G    R +RGGS++D            +  GR        NHA+  ++R     DSG  +T FRCAS
Sbjct:  118 KTFSIDITAVSNSQFQKFVRATKYKTDAEKFEWSFVLE---------------YLASKDTVDAVDGESGYGRVKDAPHWMAVQGAYWRRPEGPGSSLRGRASHPVTHVSYNDAKAYCEWAGRRLPTEREWEHAARGG-LEDEPFPWGSAALSNRM-NGWTGDFPSANDLSDGFDGTCPVDTFLPNDFGLYNMVGNVWEWVEAGSEQERVVRGGSYID------------TIDGRH-------NHALRVSSRQVVPPDSGGGSTGFRCAS 350          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A6N7D4J3_9BURK (Serine/threonine-protein kinase pkn1 n=1 Tax=Xylophilus sp. TaxID=2653893 RepID=A0A6N7D4J3_9BURK)

HSP 1 Score: 195 bits (495), Expect = 2.160e-57
Identity = 103/218 (47.25%), Postives = 131/218 (60.09%), Query Frame = 1
Query:   43 FSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAKGWK-VGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPAR---RTLRGGSFVDH 684
            FSI  HP+TN QFA FA+ +GY TEAE++   +        +G  PP            + A  G GRV G+  W  VDGA WR PEGP S L +R D PV QVSW DA A+C+WAG RLPTEAEWEYA+RGG V       + +  G + + NTWQG FP+ ++ EDG+AG +P  A+PPN  G++D+ GN WEW       R   R +RGGSF+ H
Sbjct:   70 FSIAAHPITNAQFARFADAAGYTTEAERWGSAFVF------LGHLPP-----------ARRAALGAGRVAGTPWWALVDGACWRHPEGPGSDLAARADHPVVQVSWHDAQAFCAWAGARLPTEAEWEYAARGGLVQQRYAWGDDFTPGGRWMCNTWQGRFPEYDTGEDGFAGTSPVGAYPPNGYGLFDVAGNVWEWCADRFAPRDDARAMRGGSFLCH 270          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A4R0NEX8_9SPHI (Formylglycine-generating enzyme family protein n=1 Tax=Pedobacter psychroterrae TaxID=2530453 RepID=A0A4R0NEX8_9SPHI)

HSP 1 Score: 191 bits (484), Expect = 2.160e-55
Identity = 108/278 (38.85%), Postives = 143/278 (51.44%), Query Frame = 1
Query:   43 FSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLT----ENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEW--------VDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCASP 840
            F ID H VTN QF  F + +GY+T AEK    W      MP G+  PH S L+          +  G     + W    GA+W+ P+GP+S ++ + D PV QVSW D  AY  WAG+RLPTEAEWE+ASRGG         + P  S   G    NTWQG+FP +N+  DG+ GLA    F PN  G+YDM GN WEW        + G  P+ + +RGGSF+ +D                        + +T   RM++++D+G  NT FRC SP
Sbjct:   77 FWIDVHEVTNAQFRKFVQATGYITTAEKAPD-WEELKEQMPPGTPKPHDSLLVAASLVFHSPRQVNGLSDPGQWWRWTKGASWKHPQGPKSDIDKKDDYPVVQVSWDDCTAYAKWAGKRLPTEAEWEFASRGGLADKPFPWGDEPIES---GKPKANTWQGNFPLRNTNWDGFYGLAAVKQFKPNGYGLYDMAGNVWEWCRDWYTTGLQGSAPSEKVIRGGSFMCNDSYCQ-------------------GYKVTA--RMKSSRDTGLENTGFRCVSP 329          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: UPI000C9B7AF7 (formylglycine-generating enzyme family protein n=1 Tax=Terribacillus goriensis TaxID=386490 RepID=UPI000C9B7AF7)

HSP 1 Score: 189 bits (479), Expect = 8.220e-55
Identity = 120/305 (39.34%), Postives = 156/305 (51.15%), Query Frame = 1
Query:    1 DAHSPVLPSGVYRTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWAK-----GWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWV----------DGGE--PA------RRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCASPLT 846
            D   PV    V ++F +D++ VTN +F  F ED+GYVTEAE F   W+       +   P                     RV  +  W GV GA+W+ PEGP SS+++RG+ PV  VSW DA AYC+WAG+RLPTEAEWEYA+RGG     E     W       G    N WQGDFP +N++EDGYAG APA +FPPN  G+Y+M GNAWEW            GG   PA       + LRGGS++ H                   V+  + + +  A R   T DS + +  FRCA+ +T
Sbjct:   59 DGEGPVRKIEV-KSFLLDQYAVTNTEFRRFVEDTGYVTEAEIFG--WSFVFHDFVMKGLPSK-------------------RVPQTPWWHGVHGADWKHPEGPGSSIDTRGNHPVVHVSWNDAAAYCNWAGKRLPTEAEWEYAARGG----MEQKVYPWGDELTPDGVHYCNIWQGDFPNQNTMEDGYAGTAPAESFPPNGYGLYNMSGNAWEWCADWFTRSHHNKGGRVNPAGPGNGDAKVLRGGSYLCH-------------------VSYCNRYRV--AARTSNTPDSSTGHMGFRCAADIT 316          
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Match: A0A6J0I929_9PASS (sulfatase-modifying factor 1 n=12 Tax=Passeriformes TaxID=9126 RepID=A0A6J0I929_9PASS)

HSP 1 Score: 187 bits (476), Expect = 9.400e-55
Identity = 115/276 (41.67%), Postives = 148/276 (53.62%), Query Frame = 1
Query:   37 RTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVEAPTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQPEGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVSLTENPANSWA-----KGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIYDMLGNAWEWVDGGEPARRTLRGGSFVDHDPQI----AEKAKKGSSAGREGKVAQPSNHAITPATRMETTQDSGSANTSFRCAS 837
            ++F +D++ V+N+QF  F   +G+VTEAEKF   +  E            LS  +   A I +A      V  +  W+ V GANW+ PEGP SS+ SR D PV  VSW DA A+C WAG+RLPTEAEWEY+ RGG     EN    W      KG    N WQG+FP  N+ EDGY G AP TAFPPN  G+Y+M+GNAWEW       + +    S   H+PQ      ++ KKG S            +    A R + T DS ++N  FRCAS
Sbjct:   32 KSFYMDQYEVSNEQFERFVNSTGHVTEAEKFGDSFVFEG----------MLSEAVK--ADIHQA------VAAAPWWLPVKGANWKHPEGPDSSISSRMDHPVLHVSWNDAVAFCRWAGKRLPTEAEWEYSCRGG----LENRLFPWGNKLQPKGQHYTNIWQGEFPTNNTAEDGYKGTAPVTAFPPNGFGLYNMVGNAWEWTSDWWAVQHS----SQELHNPQGPSSGTDRVKKGGSYMCHKSYC----YRYRCAARSQNTPDSSASNLGFRCAS 277          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9225.17290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR0_ECTSI4.430e-12570.15Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus si... [more]
A0A8J2SID5_9STRA7.560e-6644.49Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A8J5XF83_DIALT4.030e-6546.04FGE-sulfatase domain-containing protein n=1 Tax=Di... [more]
A0A7S2Y1G9_9STRA1.130e-6344.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YFE4_HETAK2.790e-6140.79Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SNU0_9STRA7.240e-5842.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6N7D4J3_9BURK2.160e-5747.25Serine/threonine-protein kinase pkn1 n=1 Tax=Xylop... [more]
A0A4R0NEX8_9SPHI2.160e-5538.85Formylglycine-generating enzyme family protein n=1... [more]
UPI000C9B7AF78.220e-5539.34formylglycine-generating enzyme family protein n=1... [more]
A0A6J0I929_9PASS9.400e-5541.67sulfatase-modifying factor 1 n=12 Tax=Passeriforme... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9225contigS-dermatodea_contig9225:303..2032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue4e-100
Seed eggNOG ortholog2880.D7FPR0
KEGG koko:K13444
KEGG Pathwayko04142,map04142
EggNOG free text desc.Formylglycine-generating oxidase activity
EggNOG OGs2QVDG@2759,COG1262@1
EC1.8.3.7
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSulfatase-modifying factor 2 precursor
Ec32 orthologEc-20_001020.2
Exons5
Model size849
Cds size849
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9225.17290.1prot_S-dermatodea_contig9225.17290.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9225 303..2032 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925395.1202872-CDS-S-dermatodea_contig9225:302..4331622925395.1202872-CDS-S-dermatodea_contig9225:302..433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 303..433 +
1694079904.59198-CDS-S-dermatodea_contig9225:302..4331694079904.59198-CDS-S-dermatodea_contig9225:302..433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 303..433 +
1622925395.1306362-CDS-S-dermatodea_contig9225:692..7741622925395.1306362-CDS-S-dermatodea_contig9225:692..774Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 693..774 +
1694079904.609158-CDS-S-dermatodea_contig9225:692..7741694079904.609158-CDS-S-dermatodea_contig9225:692..774Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 693..774 +
1622925395.1438777-CDS-S-dermatodea_contig9225:799..9841622925395.1438777-CDS-S-dermatodea_contig9225:799..984Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 800..984 +
1694079904.6190388-CDS-S-dermatodea_contig9225:799..9841694079904.6190388-CDS-S-dermatodea_contig9225:799..984Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 800..984 +
1622925395.1578078-CDS-S-dermatodea_contig9225:1241..14371622925395.1578078-CDS-S-dermatodea_contig9225:1241..1437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 1242..1437 +
1694079904.6292949-CDS-S-dermatodea_contig9225:1241..14371694079904.6292949-CDS-S-dermatodea_contig9225:1241..1437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 1242..1437 +
1622925395.174541-CDS-S-dermatodea_contig9225:1777..20321622925395.174541-CDS-S-dermatodea_contig9225:1777..2032Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 1778..2032 +
1694079904.6403477-CDS-S-dermatodea_contig9225:1777..20321694079904.6403477-CDS-S-dermatodea_contig9225:1777..2032Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9225 1778..2032 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9225.17290.1

>prot_S-dermatodea_contig9225.17290.1 ID=prot_S-dermatodea_contig9225.17290.1|Name=mRNA_S-dermatodea_contig9225.17290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=283bp
DAHSPVLPSGVYRTFSIDKHPVTNDQFAAFAEDSGYVTEAEKFHQRWAVE
APTMPVGSAPPHLSPLLDGYATIKEADEGIGRVKGSEHWVGVDGANWRQP
EGPRSSLESRGDVPVAQVSWVDANAYCSWAGRRLPTEAEWEYASRGGHVS
LTENPANSWAKGWKVGNTWQGDFPKKNSLEDGYAGLAPATAFPPNELGIY
DMLGNAWEWVDGGEPARRTLRGGSFVDHDPQIAEKAKKGSSAGREGKVAQ
PSNHAITPATRMETTQDSGSANTSFRCASPLTK
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mRNA from alignment at S-dermatodea_contig9225:303..2032+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9225.17290.1 ID=mRNA_S-dermatodea_contig9225.17290.1|Name=mRNA_S-dermatodea_contig9225.17290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1730bp|location=Sequence derived from alignment at S-dermatodea_contig9225:303..2032+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GATGCTCACTCTCCAGTCCTCCCCTCCGGCGTTTACAGGACGTTCAGCAT CGACAAACACCCCGTCACAAACGACCAGTTCGCCGCCTTCGCGGAGGACT CGGGCTACGTCACCGAGGCCGAGAAGTTTCAGTGGAGTTTCGTGTTGGAG TGAGTTCTGCTGCTACACGTACCGATACTGGCGTGTATGTTGTGTCGAGT GTGTTACCCTGCTGCCAATGCTTGAGGCCCTTTACCCTCGACTTTTCCGG TTCCCACCATCCTGCTGGATGCGTTCTCCCCTCGTTGATCTCTGTGTGTA TTCCTCTTGCTGTGCTCTTTTGGCGATCAATCCTCTCTCGCGCATTAATT TGCCGTGGAACGGGACTGGGGGATGTGCATGTGTTACCAGCCAAAGATGG GCTGTGGAGGCCCCAACCATGCCTGTGGGGTCTGCACCCCCTCACCTCTC ACCGCTGCTCGATGGTTATGCCGTCCAGATATCTTCTTGATGCGGAGACC ATCAAAGAAGCCGACGAGGGGATTGGACGGGTAAAGGGATCAGAACATTG GGTTGGGGTGGACGGGGCAAACTGGCGACAACCGGAGGGGCCCCGGTCAT CGTTGGAGAGCCGAGGAGACGTACCCGTGGCGCAGGTTTCGTGGGTGGAC GCCAACGCCTATTGCAGCTGGGCTGGCAGGCGGTACGTGTGCAATCGGTC ACTGTTTGGGCCGAGTTCACCGCTAACAGCGCGTCCTGGTGTAGAGATTT TTACGTTTTGGCGATAGCATCGCCTGATGAAGACACCGCAATGCACACAG GCCCACAGATGCCAACAAACTCAGTCTTCGAGGAGAACCGGGTGCGCGGG GGTTGCCCGCTACCCGCCAAAGTTTTGGCTCGTGCCACGCTGTAAATAAC TTTCAACATGAACACGATGCCGTCGTAATTGCAAAACAGGCTTCCGACGG AAGCCGAATGGGAATATGCATCTCGCGGCGGCCACGTTTCTTTGACAGAG AATCCGGCGAACAGCTGGGCAAAAGGGTGGAAGGTTGGAAACACGTGGCA AGGAGATTTCCCGAAGAAGAATTCCCTCGAGGACGGATATGCAGGGCTGG CACCTGCAACTGCTTTCCCACCCAACGAGCTCGGGGTAAGATTTATTGTC CGTAGTACTGTAGACGTTTTATGCACAAGTCCGACTCGATTTCAGTGGTG TTCAAGCCGACGCGAGCTGTATACGGTGTGATCGTTGAAAGGACGCCGGT TCGTGCCGAGGACGTTTTGATTCGTGGGGGTGCAACAAGCATAAGCCCGC CGCAACACGCCGGTGAAACGAGCTAAACGGCGAATGACAGACGAGGGCCT TAAGTGTTGCCTTGCTCAAGCCTCCATTCAACACGGCTGAGTTACCTAAG CTCCTGACCACATTAGTACGTCTGGATATCCCACAGAAAACGTCCCATGC CTTTCACTCTGTCGTTGCATCCCAGATTTACGACATGCTGGGAAACGCGT GGGAATGGGTGGACGGCGGGGAGCCCGCTCGACGCACTCTTCGGGGAGGG TCTTTCGTCGACCACGACCCCCAGATTGCCGAGAAAGCGAAGAAGGGCTC CTCTGCCGGCCGCGAAGGCAAGGTCGCGCAGCCGTCGAACCACGCCATTA CACCAGCAACTCGAATGGAAACGACCCAAGACAGCGGCAGCGCTAACACA TCCTTCCGGTGCGCTTCGCCCTTGACGAAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9225:303..2032+

>mRNA_S-dermatodea_contig9225.17290.1 ID=mRNA_S-dermatodea_contig9225.17290.1|Name=mRNA_S-dermatodea_contig9225.17290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at S-dermatodea_contig9225:303..2032+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GATGCTCACTCTCCAGTCCTCCCCTCCGGCGTTTACAGGACGTTCAGCAT
CGACAAACACCCCGTCACAAACGACCAGTTCGCCGCCTTCGCGGAGGACT
CGGGCTACGTCACCGAGGCCGAGAAGTTTCAGATGCTCACTCTCCAGTCC
TCCCCTCCGGCGTTTACAGGACGTTCAGCATCGACAAACACCCCGTCACA
AACGACCAGTTCGCCGCCTTCGCGGAGGACTCGGGCTACGTCACCGAGGC
CGAGAAGTTTCACCAAAGATGGGCTGTGGAGGCCCCAACCATGCCTGTGG
GGTCTGCACCCCCTCACCTCTCACCGCTGCTCGATGGTTATGCCCCAAAG
ATGGGCTGTGGAGGCCCCAACCATGCCTGTGGGGTCTGCACCCCCTCACC
TCTCACCGCTGCTCGATGGTTATGCCACCATCAAAGAAGCCGACGAGGGG
ATTGGACGGGTAAAGGGATCAGAACATTGGGTTGGGGTGGACGGGGCAAA
CTGGCGACAACCGGAGGGGCCCCGGTCATCGTTGGAGAGCCGAGGAGACG
TACCCGTGGCGCAGGTTTCGTGGGTGGACGCCAACGCCTATTGCAGCTGG
GCTGGCAGGCGACCATCAAAGAAGCCGACGAGGGGATTGGACGGGTAAAG
GGATCAGAACATTGGGTTGGGGTGGACGGGGCAAACTGGCGACAACCGGA
GGGGCCCCGGTCATCGTTGGAGAGCCGAGGAGACGTACCCGTGGCGCAGG
TTTCGTGGGTGGACGCCAACGCCTATTGCAGCTGGGCTGGCAGGCGGCTT
CCGACGGAAGCCGAATGGGAATATGCATCTCGCGGCGGCCACGTTTCTTT
GACAGAGAATCCGGCGAACAGCTGGGCAAAAGGGTGGAAGGTTGGAAACA
CGTGGCAAGGAGATTTCCCGAAGAAGAATTCCCTCGAGGACGGATATGCA
GGGCTGGCACCTGCAACTGCTTTCCCACCCAACGAGCTCGGGGCTTCCGA
CGGAAGCCGAATGGGAATATGCATCTCGCGGCGGCCACGTTTCTTTGACA
GAGAATCCGGCGAACAGCTGGGCAAAAGGGTGGAAGGTTGGAAACACGTG
GCAAGGAGATTTCCCGAAGAAGAATTCCCTCGAGGACGGATATGCAGGGC
TGGCACCTGCAACTGCTTTCCCACCCAACGAGCTCGGGATTTACGACATG
CTGGGAAACGCGTGGGAATGGGTGGACGGCGGGGAGCCCGCTCGACGCAC
TCTTCGGGGAGGGTCTTTCGTCGACCACGACCCCCAGATTGCCGAGAAAG
CGAAGAAGGGCTCCTCTGCCGGCCGCGAAGGCAAGGTCGCGCAGCCGTCG
AACCACGCCATTACACCAGCAACTCGAATGGAAACGACCCAAGACAGCGG
CAGCGCTAACACATCCTTCCGGTGCGCTTCGCCCTTGACGAAGATTTACG
ACATGCTGGGAAACGCGTGGGAATGGGTGGACGGCGGGGAGCCCGCTCGA
CGCACTCTTCGGGGAGGGTCTTTCGTCGACCACGACCCCCAGATTGCCGA
GAAAGCGAAGAAGGGCTCCTCTGCCGGCCGCGAAGGCAAGGTCGCGCAGC
CGTCGAACCACGCCATTACACCAGCAACTCGAATGGAAACGACCCAAGAC
AGCGGCAGCGCTAACACATCCTTCCGGTGCGCTTCGCCCTTGACGAAG
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