mRNA_S-dermatodea_contig9179.17240.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: D7FZC7_ECTSI (MinC_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC7_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.810e-42 Identity = 87/117 (74.36%), Postives = 96/117 (82.05%), Query Frame = 3
Query: 549 KETMVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLPGLVLDAPTNVSLREDNNELVFRSFDLSS 899
+ETMVYQ SVRSGQQV+AEGTSLVV+G DGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVG+ +TFTT P+SL GLV+D PTNV LRE N+LVF SFDLS+
Sbjct: 195 RETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLVVDTPTNVCLRE--NKLVFHSFDLSA 309
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A6H5JAT5_9PHAE (MinC_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 7.240e-39 Identity = 87/130 (66.92%), Postives = 98/130 (75.38%), Query Frame = 3
Query: 510 EGPSEAGGERGVEKETMVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLPGLVLDAPTNVSLREDNNELVFRSFDLSS 899
EG + E G ++ETMVYQ SVRSGQQV+AEGTSL GDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVG+ ++FTT P++L GLV+DAPTNV LRE NELVF SFDLS+
Sbjct: 322 EGSGTSLSEEGSDRETMVYQGSVRSGQQVFAEGTSLXXXXXXXXXXXXXXXGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGESFTTLDSPENLAGLVVDAPTNVCLRE--NELVFHSFDLSA 449
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A1V9ZBU1_9STRA (MinC_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBU1_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.210e-26 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 3
Query: 558 MVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDS--LPGLVLDAPTNVSLREDNNELVFRSF 887
M+ + SVR+GQQVYA+ L+V+G+V SG EV+ADGDIHVYGTL+GRALAG+ GN +AK+FA +FDAEL+ I+DTFTTC + ++ L +V D PT + L +N+ L F+S
Sbjct: 180 MLVEGSVRTGQQVYAKDQGLIVMGSVHSGAEVLADGDIHVYGTLKGRALAGIGGNNNAKVFAQKFDAELISIADTFTTCDELEARELGTIVEDKPTIIWL--ENSVLRFKSI 289
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A4D9CRC4_9STRA (MinC_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRC4_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.390e-26 Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 3
Query: 558 MVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLP-------GLVLDAPTNVSLREDNNELVFRSF 887
MV + SVR+GQQV AEGTSLVV+G V SG EV ADGDIH+YG L GRALAGLSG+ AKIFA RF+AELV I + FTTC + G V+ P +VSL E +L+FR+F
Sbjct: 243 MVVEGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGHVRAKIFAGRFNAELVAIGEVFTTCDVGEGGGRGRREGCGAVVGGPASVSLEEKTGQLLFRTF 359
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A6G0XUR6_9STRA (MinC_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUR6_9STRA) HSP 1 Score: 114 bits (286), Expect = 9.210e-25 Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 3
Query: 561 VYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLPG-----LVLDAPTNVSLREDNNELVFRS 884
+ ++SVR+GQQ+YA+G +L+V+G+V+SG EV+ADGDIHVYG L+GRALAG+ GN AK+FA +FDAEL+ I+DTFTTC D+L +V D PT V L ++ L F+S
Sbjct: 192 IVESSVRTGQQIYAKGQNLIVLGSVNSGAEVLADGDIHVYGVLKGRALAGIGGNTEAKVFAQKFDAELISIADTFTTC---DALEARERGDVVDDRPTVVWL--EDGVLQFKS 299
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: T0S5F8_SAPDV (Septum site-determining protein MinC n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S5F8_SAPDV) HSP 1 Score: 114 bits (285), Expect = 1.360e-24 Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 3
Query: 558 MVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCH--DPDSLPGLVLDAPTNVSLREDNNELVFRS 884
MV + SVR+GQQVYA+ LVV+G+V+SG EV+ADGDIH+YGTL+GRALAG+ GN AK++ +FDAEL+ I+DTFTTC + + +V D PT V L ++ L F+S
Sbjct: 196 MVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALEAREIGHVVDDKPTIVWL--EDGALQFKS 304
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A1V9YDL4_9STRA (MinC_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDL4_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.440e-24 Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 3
Query: 558 MVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCH--DPDSLPGLVLDAPTNVSLREDNNELVFRS 884
M+ + SVR+GQQVYA+ L+V+G+V+SG EV+ADGDIHVYGTL+GRALAG+ GN AK++A +FDAEL+ I+DTFTTC + + +V D PT V L ++ L F+S
Sbjct: 194 MLVEGSVRTGQQVYAKEQGLIVMGSVNSGAEVLADGDIHVYGTLKGRALAGIGGNVRAKVYAHKFDAELISIADTFTTCDALEAREVGHIVSDKPTVVWL--EDGALQFKS 302
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: B3PCV5_CELJU (Probable septum site-determining protein MinC n=1 Tax=Cellvibrio japonicus (strain Ueda107) TaxID=498211 RepID=B3PCV5_CELJU) HSP 1 Score: 107 bits (266), Expect = 1.450e-22 Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 3
Query: 534 ERGVEKETMVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLPGLVLDAPTNVSLRED 860
ER V++++ V VRSGQQ+YAEG L+V+ VS G EV+ADG IHVYGTLRGRALAG+ G++SA+IF + +AELV I+ F DSLP +L P VSL D
Sbjct: 133 ERLVQRQSRVITRPVRSGQQIYAEGADLIVLAQVSEGAEVLADGHIHVYGTLRGRALAGVKGDESARIFCQQLEAELVSIAGNFVL---QDSLPKALLKKPAQVSLSGD 238
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A1U9N9X9_9GAMM (Probable septum site-determining protein MinC n=3 Tax=Cellvibrio TaxID=10 RepID=A0A1U9N9X9_9GAMM) HSP 1 Score: 105 bits (262), Expect = 5.520e-22 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 3
Query: 534 ERGVEKETMVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGISDTFTTCHDPDSLPGLVLDAPTNVSLR 854
ER V++++ V VRSGQQ+YAEG L+V+ VS G EV+ADG IHVYGTLRGRALAG+ G++SA+IF + +AELV ++ F DSLP +L P VSL+
Sbjct: 137 ERLVQRQSKVITRPVRSGQQIYAEGADLIVLAQVSEGAEVLADGHIHVYGTLRGRALAGVKGDESARIFCQQMEAELVSVAGNFVL---QDSLPPELLKKPVQVSLK 240
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Match: A0A485LKA1_9STRA (Aste57867_21970 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKA1_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.610e-22 Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 3
Query: 558 MVYQASVRSGQQVYAEGTSLVVIGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKI----FATRFDAELVGISDTFTTC 794
MV + SVR+GQQ+YA+G L+V+G+V+SG EV+ADGDIHVYG L+GRALAG+ G+ +AK+ +A +FDAEL+ I+DTFTTC
Sbjct: 198 MVVEGSVRTGQQIYAKGQGLIVMGSVNSGAEVLADGDIHVYGVLKGRALAGIGGHTTAKVRIAVYAQKFDAELISIADTFTTC 280 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9179.17240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9179.17240.1 >prot_S-dermatodea_contig9179.17240.1 ID=prot_S-dermatodea_contig9179.17240.1|Name=mRNA_S-dermatodea_contig9179.17240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=176bp MAAVSSSRVTAPDVPVRGNNAAEPAGEGQGNVSVAIDSKEILEGPSEAGGback to top mRNA from alignment at S-dermatodea_contig9179:70..7996+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9179.17240.1 ID=mRNA_S-dermatodea_contig9179.17240.1|Name=mRNA_S-dermatodea_contig9179.17240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7927bp|location=Sequence derived from alignment at S-dermatodea_contig9179:70..7996+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9179:70..7996+ >mRNA_S-dermatodea_contig9179.17240.1 ID=mRNA_S-dermatodea_contig9179.17240.1|Name=mRNA_S-dermatodea_contig9179.17240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at S-dermatodea_contig9179:70..7996+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |