mRNA_S-dermatodea_contig9165.17229.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9165.17229.1
Unique NamemRNA_S-dermatodea_contig9165.17229.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 2.120e-79
Identity = 145/185 (78.38%), Postives = 162/185 (87.57%), Query Frame = 1 
Query:    1 HPIFQPFMFFDLTTGQQ-KRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARPGCDLLALKP 552
            HPIFQPFMFFDLTTG+Q +R GGGSLSN  EA L +NVY+TLKR+FGG G  GSGDE+GIAGRVGVISPY +Q+ VL++KF+E LG  W ++VEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSA+ALSVNPKW ELA+LA    GLV+V  P CDLL+LKP
Sbjct:  521 HPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGAGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAERREGLVKVTDPRCDLLSLKP 705
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 7.000e-76
Identity = 139/176 (78.98%), Postives = 155/176 (88.07%), Query Frame = 1 
Query:    1 HPIFQPFMFFDLTTGQQ-KRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARP 525
            HPIFQPFMFFDLTTG+Q +R GGGSLSN  EA L +NVY+TLKR+FGG G  GSGDE+GIAGRVGVISPY +Q+ VL++KF+E LG  W ++VEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSA+ALSVNPKW ELA+LA S  GLV+V  P
Sbjct:  597 HPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAESREGLVKVTDP 772
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: W7TG92_9STRA (Helicase sen1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG92_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.730e-39
Identity = 96/189 (50.79%), Postives = 120/189 (63.49%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTT----GQQK-RLGGGSLS--NIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARPGCDLLALK 549
            P FQPF F DL +    G+ K R GGG LS  N  EA L +NVY TL+R   G          G+ G+VGVI+PY  Q+  L  +F   LG ++Q+EVE++TVD  QG+EKDVI+ S VRA G RGIGFLADVRRMNV LTR R  + VVG A+ L  N  W  L + AR++G  V+V  PGC+LL L+
Sbjct:  460 PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKG---------QGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQ 639
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A4D9CTX5_9STRA (WW domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTX5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.160e-39
Identity = 96/189 (50.79%), Postives = 120/189 (63.49%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTT----GQQK-RLGGGSLS--NIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARPGCDLLALK 549
            P FQPF F DL +    G+ K R GGG LS  N  EA L +NVY TL+R   G          G+ G+VGVI+PY  Q+  L  +F   LG ++Q+EVE++TVD  QG+EKDVI+ S VRA G RGIGFLADVRRMNV LTR R  + VVG A+ L  N  W  L + AR++G  V+V  PGC+LL L+
Sbjct:  969 PAFQPFTFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKG---------QGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQ 1148
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A7S1YT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT54_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.900e-39
Identity = 82/162 (50.62%), Postives = 109/162 (67.28%), Query Frame = 1 
Query:   31 DLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRV 516
            DL + +++  GG SLSN  EA L L++Y  LK   GG              RV VI+PY+QQ  +LR  F E +G  ++  VE++TVDAFQGRE +++I S VRAAGSRGIGFL+DVRRMNVALTRA+H LFV+   ++++VNP W +L E AR +  +VRV
Sbjct:    4 DLDSSEER--GGTSLSNSAEARLALHLYKGLKDETGGLSAKS---------RVAVITPYSQQAALLRRTFSEAMGSDYEKAVEVNTVDAFQGREANIVIFSCVRAAGSRGIGFLSDVRRMNVALTRAKHFLFVIARCRSITVNPYWRDLVEHARENRAVVRV 154
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A7S4R098_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R098_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.550e-38
Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRV 516
            P F+PF   DL + +++  GG SLSN  EA L L++Y +LK   GG              RV VI+PY+QQ  +LR  F E +G  ++  VE++TVDAFQGRE +++I S VRAAGSRGIGFL+DVRRMNVALTRA+H LFV+   ++++VNP W +L E AR +  +VRV
Sbjct:  971 PAFEPFTILDLDSAEER--GGTSLSNSAEARLALHLYKSLKDETGGLSAKS---------RVAVITPYSQQAALLRRTFSEAMGSDYEKAVEVNTVDAFQGREANIVIFSCVRAAGSRGIGFLSDVRRMNVALTRAKHFLFVIARCRSITVNPYWRDLVEHARENRAVVRV 1130
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A1E7EPV8_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPV8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 7.110e-38
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARP 525
            P FQPF   DL + +++  GG SLSN  EA+L +++Y +LK+  GG   S          RV VI+PY+QQ  +LR  F + LG  +   VE++TVDAFQGRE +++I S VRAAGS GIGFL+DVRRMNVALTRA+H LFV+   K++ VNP W +L E AR +  +V V +P
Sbjct:  851 PAFQPFTILDLDSQEER--GGTSLSNSTEAHLAVHLYTSLKQITGGLSASS---------RVAVITPYSQQAGLLRRCFGDLLGKDYTKYVEVNTVDAFQGREANIVIFSAVRAAGSHGIGFLSDVRRMNVALTRAKHFLFVIARCKSIVVNPYWKDLVEHARDTNAVVTVPKP 1013
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: D0N7H3_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N7H3_PHYIT)

HSP 1 Score: 161 bits (407), Expect = 1.470e-37
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARPGCDLLALKP 552
            P F P +F++L + ++K     S  N+ EA L +N++LTLK          S   N I+G+VG+I+PY+QQ++ LR++F+  LG  ++ EVEI+TVD FQGREKD+II+STVRA    G+GFL D+RRMNVALTRA+   +V+G    L  +  WS L + A +   +V V  P C+LL LKP
Sbjct: 1015 PAFMPLVFWNLLSSREKATKSVSRMNVGEAELAVNLFLTLKN---------SCPPNAISGKVGMITPYSQQMDELRNRFRHALGERYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHAYNHHCIVHVESPKCNLLTLKP 1188
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BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A329SX13_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SX13_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.290e-37
Identity = 85/183 (46.45%), Postives = 118/183 (64.48%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVARPGCDLLALKP 552
            P F P +F++L + ++K     S  NI EA L +N++LTLK          S   N IAG+VG+I+PY+QQ++ LR++F+  LG  ++ EVEI+TVD FQGREKD+II+STVRA    G+GFL D+RRMNVALTRA+   +V+G    L  +  WS L +   +   +V V  P C+LL LKP
Sbjct: 1068 PAFMPLVFWNLLSSREKATKSVSRMNIGEAELAVNLFLTLKN---------SCPPNAIAGKVGMITPYSQQMDELRNRFRRALGDRYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHVYNHHCIVHVESPQCNLLTLKP 1241
[Close]
BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Match: A0A7S3QDL7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDL7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.500e-36
Identity = 83/173 (47.98%), Postives = 114/173 (65.90%), Query Frame = 1 
Query:    4 PIFQPFMFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDENGIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWSELAELARSSGGLVRVAR 522
            P F+PF  FDL + +++  GG SLSN  EA   L +Y  L + FG F  +          +V VI+PY QQ  ++R  F + LG  ++  VE++TVD+FQGRE +++I S VRAAGS+GIGFL+DVRRMNVALTRA+H LFV+   K++SVNP W +L + A+ S  +V V R
Sbjct: 1050 PSFKPFTVFDLDSSEER--GGSSLSNATEARFALQLYQNLTKEFGIFVSTS---------KVSVITPYAQQAALIRQTFAQALGSEYRQLVEVNTVDSFQGREANIVIFSCVRAAGSKGIGFLSDVRRMNVALTRAKHFLFVIARCKSISVNPYWGQLVKHAKDSRAVVTVPR 1211
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9165.17229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH06_9PHAE2.120e-7978.38WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G8X2_ECTSI7.000e-7678.98WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
W7TG92_9STRA1.730e-3950.79Helicase sen1 (Fragment) n=1 Tax=Nannochloropsis g... [more]
A0A4D9CTX5_9STRA4.160e-3950.79WW domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A7S1YT54_9STRA6.900e-3950.62Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4R098_9STRA5.550e-3850.29Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7EPV8_9STRA7.110e-3850.00p-loop containing nucleoside triphosphate hydrolas... [more]
D0N7H3_PHYIT1.470e-3745.90Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A329SX13_9STRA2.290e-3746.45Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A7S3QDL7_9STRA2.500e-3647.98Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9165contigS-dermatodea_contig9165:2571..6170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.1
Seed ortholog evalue1.1e-65
Seed eggNOG ortholog2880.D7G8X2
KEGG koko:K10706
EggNOG free text desc.positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled
EggNOG OGsCOG1112@1,KOG1801@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021
Hectar predicted targeting categoryother localisation
Exons4
Model size1962
Cds size1941
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9165.17229.1prot_S-dermatodea_contig9165.17229.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9165 2571..6149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925390.713362-CDS-S-dermatodea_contig9165:2570..27401622925390.713362-CDS-S-dermatodea_contig9165:2570..2740Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2571..2740 -
1694079901.5391316-CDS-S-dermatodea_contig9165:2570..27401694079901.5391316-CDS-S-dermatodea_contig9165:2570..2740Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2571..2740 -
1622925390.723326-CDS-S-dermatodea_contig9165:2840..28571622925390.723326-CDS-S-dermatodea_contig9165:2840..2857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2841..2857 -
1694079901.5534089-CDS-S-dermatodea_contig9165:2840..28571694079901.5534089-CDS-S-dermatodea_contig9165:2840..2857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2841..2857 -
1622925390.7328691-CDS-S-dermatodea_contig9165:2982..45141622925390.7328691-CDS-S-dermatodea_contig9165:2982..4514Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2983..4514 -
1694079901.5631552-CDS-S-dermatodea_contig9165:2982..45141694079901.5631552-CDS-S-dermatodea_contig9165:2982..4514Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 2983..4514 -
1622925390.743792-CDS-S-dermatodea_contig9165:5927..61491622925390.743792-CDS-S-dermatodea_contig9165:5927..6149Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 5928..6149 -
1694079901.5752444-CDS-S-dermatodea_contig9165:5927..61491694079901.5752444-CDS-S-dermatodea_contig9165:5927..6149Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9165 5928..6149 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925390.7578855-UTR-S-dermatodea_contig9165:6149..61701622925390.7578855-UTR-S-dermatodea_contig9165:6149..6170Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9165 6150..6170 -
1694079901.588296-UTR-S-dermatodea_contig9165:6149..61701694079901.588296-UTR-S-dermatodea_contig9165:6149..6170Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9165 6150..6170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9165.17229.1

>prot_S-dermatodea_contig9165.17229.1 ID=prot_S-dermatodea_contig9165.17229.1|Name=mRNA_S-dermatodea_contig9165.17229.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=647bp
MFFDLTTGQQKRLGGGSLSNIPEAYLTLNVYLTLKRAFGGFGPSGSGDEN
GIAGRVGVISPYTQQVNVLRDKFKEGLGHAWQDEVEISTVDAFQGREKDV
IIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAKALSVNPKWS
ELAELARSSGGLVRVARPGCDLLALKPAAARAAAEAGARRSVSPVPTPRL
LPFSANGVRAEAPAERVRAGGGGGGGGVSAVSGGGGGGGDRGRCAVVSAG
AGAEEDGGKEGAGDTGERSVVSVAVPSAGSIAALPLSDSTAPVPLQPTPA
SEITAEIAAGVPGVAAQSSLSAQQEVRPHSPPPPSRAAGQPQTQNQQEEA
RGVGGGSDKGGDGAVVGTAVAAQGAKEEVGVRVSTPSPPPPQQASVPPIT
SAMPSALPPRPRPPVPPPGPPPKRPEPAAVITAAATPPSENVPPTATAEA
EGAAAAEATAGVDGGPPPPLKSTGKPKPRPPSYPRPRNPSDPRCAGNQPP
GAAATQKSKPKPPPPRSTESPPPSPAGAVSPTSPVPPATSTTTATPAAAR
RPGDPRPRPRPPPYPRGSGPGGKQPSTTAADNSAPTRRTAWRAAGPPPPP
PPPPPPPHLAPTGVAPPGFARGDGRAGLPVATPPRSPPPRDPRKRDR
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mRNA from alignment at S-dermatodea_contig9165:2571..6170-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9165.17229.1 ID=mRNA_S-dermatodea_contig9165.17229.1|Name=mRNA_S-dermatodea_contig9165.17229.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3600bp|location=Sequence derived from alignment at S-dermatodea_contig9165:2571..6170- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACCCCATATTCCAGCCGTTCATGTTTTTCGACCTCACCACGGGACAGCA
GAAGCGGCTCGGGGGGGGGTCTTTGAGCAACATCCCAGAGGCATACCTCA
CCTTGAACGTTTACCTCACCCTCAAGCGCGCATTCGGCGGCTTCGGGCCG
AGCGGGTCGGGGGACGAGAACGGGATCGCCGGGAGGGTCGGGGTGATATC
CCCGTACACCCAGCAGGTCAACGTGCTCCGGGATAAGTTTAAGGTGCGAC
CAACGATGCGATTTTTCTTTTTCTTTTTTCGGAAACGCGTTATCTTGTGT
GGGTATGTGTGGGGGTGGGGGTGGGGAAGGGAGGTGTGTCAAGCCAAAAC
ATCAAATGATGAAATAGCCTATTACGGCGGACCATAGTTAACAGGTCCAA
ATTTGCCACAAGTCTCGACCTAGAAATATCAAAATTGGCTGGAATCATCG
AGATTTCAAGGTCGATGTTTTTGTATATGGCAATGTCTTGGGTGTGTTGT
GTTTTTTTTTCCGTGAGATTTTTGTTGTTACGTGGGTATTCATGGTCGCG
AGATTTGGTCCTGCTTACTGTGTACCTCCGTAGTAATACGGTAGTGTTTG
TCTCGCCTCTCGTAACGCACTTGCAGTGAAACCCCCTACAGCGTTGGCCT
GACCGGCTGGTTGCGTTGACTTAAGATAACCATTTGAGCTCGATCTCAGC
TTGACCAATGAAACCGTGCATGTTTTGACAGTGCAGCAGTTATCGATCCT
GCTGCCGCCGCCCCAAATGAGCATCCAGCGGTCATGCAACAAAATCATCC
GCGAACTAGCCTACAGTAATGTACAACCTCGCACGTACCTTAGCTCACCG
TATGGTGCTTCTTTTACCATGGAATGCACGCTGGGATGGATCCTGTCAGA
CCAAAATAGTTTATGATTACCAGCGTGTCATTCGATACAAATTAGTTTAG
TTGTTGAGGATTGGGAGTCACCCTGTATATGGCGGGGAGGGCGCGGGGGG
CGCGTGAGGGGGGTTGAGGGGGGGCATCGCGGGCGTGCGAGGTTGCTGTC
GCCTTGTTTTTCTGTGATGTTTGCTGACGGACCTGGTGCTTAGAGAATGC
CGCGGGAATTTTGTGGGAGAGCGGGCCGGAAATAAAGCCTCCGGCTTGTT
TGTGGCGAACGGCGTGTATCGCTTTGGTGTGCTCTGTTGTAGGAGCGCTA
ACGTTGCACTCCACGGAACGCTTTGCTCTTCGCTACACTTCCGGGTTCCA
GTCGAAGGACTCGTGGACGATGTTTAGGAGGGTCTACCTTCAAGTACTAC
CCGAGAGAGAACGGCGCGCTTGGTTGCACTTGGCCCATGCCGCCTTTCGC
AGAACCAGCTAACGGATCACAGCCCCCCCCCCCCCGCGCCGCCGCTGTGA
AAAATATGGTAAAACAATCCGCTGAAGGGCGAATGCTACACAACCCCAGC
TCTCGCACACCTCCGGGGTATTTTAGCCGAGCCCCTTGCCCCACCCCTTA
CGCAATGTACAATGTTCCCAATCGACCTTGAGAACCATGTGCGGGATCAA
GAAAAACTCCGGTGCCCTTCATCCCGCTGATAATATCCCCCCCCCTCCCG
AACACGCTAACGATTGCCCCCCCCTCCTCGTTCCACGCATGCGCGCACCC
CGGCAGGAAGGGCTTGGGCACGCCTGGCAGGATGAAGTTGAAATCAGCAC
GGTCGACGCCTTCCAGGGCCGAGAAAAGGACGTTATCATCGTGTCAACTG
TGCGCGCCGCGGGGTCGCGCGGAATTGGCTTCCTCGCAGACGTACGCCGA
ATGAATGTGGCCCTAACACGCGCAAGGCACGGGCTCTTCGTCGTCGGCTC
CGCCAAGGCCCTCTCGGTGAACCCGAAGTGGTCGGAGCTCGCAGAGCTCG
CCCGAAGTAGCGGAGGCCTTGTGAGGGTCGCACGCCCTGGGTGCGATCTG
CTCGCGCTAAAGCCTGCCGCGGCGCGGGCAGCGGCCGAGGCAGGGGCTCG
TCGGTCCGTGTCGCCCGTGCCTACGCCAAGACTGCTTCCTTTTTCCGCGA
ACGGCGTTCGGGCTGAAGCGCCTGCTGAGAGGGTTAGGGCCGGTGGCGGT
GGCGGTGGTGGTGGTGTTAGTGCTGTCAGTGGTGGTGGTGGTGGTGGTGG
TGACCGTGGTCGATGCGCTGTTGTTAGCGCTGGCGCTGGTGCGGAAGAGG
ATGGTGGAAAGGAAGGAGCCGGGGACACGGGAGAGCGTAGCGTCGTTTCT
GTCGCGGTTCCGTCCGCAGGATCCATCGCCGCGCTCCCGCTCTCGGACAG
TACGGCACCCGTCCCGCTGCAGCCGACCCCGGCAAGCGAAATCACCGCGG
AAATTGCGGCCGGGGTGCCGGGGGTCGCCGCGCAATCAAGCCTGTCGGCG
CAGCAAGAGGTGAGGCCACATTCTCCCCCGCCTCCGTCCCGGGCGGCAGG
TCAGCCTCAAACTCAAAATCAGCAAGAAGAAGCGAGAGGAGTTGGGGGGG
GGAGTGACAAGGGCGGAGACGGGGCTGTGGTAGGTACGGCTGTGGCCGCT
CAGGGTGCGAAAGAGGAGGTGGGGGTTAGGGTTTCGACGCCTTCGCCACC
ACCGCCGCAGCAAGCGAGCGTTCCACCAATAACCTCTGCTATGCCTTCGG
CATTACCGCCGAGACCGCGACCGCCGGTGCCACCGCCAGGCCCACCTCCG
AAGCGACCAGAACCAGCAGCAGTAATCACAGCTGCGGCGACACCACCGTC
CGAAAACGTACCCCCTACGGCAACTGCGGAGGCGGAGGGTGCGGCGGCGG
CGGAAGCAACAGCAGGAGTGGATGGCGGTCCGCCGCCTCCTCTCAAGAGC
ACTGGCAAACCTAAGCCCCGGCCACCATCGTATCCCCGACCCCGAAATCC
ATCCGACCCGCGGTGTGCGGGGAACCAGCCGCCCGGCGCTGCTGCCACCC
AGAAAAGCAAACCTAAACCGCCCCCGCCGCGTAGCACGGAATCACCGCCA
CCCTCCCCCGCAGGGGCTGTGAGTCCGACGTCCCCGGTCCCTCCTGCAAC
GTCCACAACGACGGCGACACCTGCCGCCGCGAGGCGCCCCGGCGATCCAC
GACCCCGACCCCGACCTCCACCCTACCCTCGCGGCAGCGGCCCTGGCGGA
AAGCAGCCTTCCACTACGGCTGCAGACAACTCTGCCCCGTCAGCGGCGCA
GGCGGCGTCGCCTATCACGCCCCCTCTCGCGCCGCCTATGGCACCACCAA
TGGCGCCGCCAATTGCGCCGCCAGTTCTGCCGCCAATTGCGCCACCTGTA
GCGCCGCCTATAGCACCCGTCGCACTGCCTGTTCCACCGCAGTTCGCGCC
GCCTATCGCGCCGCCAACCGTGGGACCGATGGTGGTGCCGATGGCGGTGC
CGATGGCGGTACCGATGATGGGACCGGCAGGGCGTGCGGCAGGCCCGCCG
CCGCCACCGCCGCCACCCCCGCCCCCACCGCATCTCGCCCCCACCGGCGT
CGCCCCTCCCGGTTTCGCCCGCGGGGACGGGCGAGCGGGGTTGCCGGTAG
CAACGCCCCCACGTTCTCCGCCCCCGCGGGATCCCAGGAAGCGGGACAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9165:2571..6170-

>mRNA_S-dermatodea_contig9165.17229.1 ID=mRNA_S-dermatodea_contig9165.17229.1|Name=mRNA_S-dermatodea_contig9165.17229.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3882bp|location=Sequence derived from alignment at S-dermatodea_contig9165:2571..6170- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTTTTCGACCTCACCACGGGACAGCAGAAGCGGCTCGGGGGGGGGTC
TTTGAGCAACATCCCAGAGGCATACCTCACCTTGAACGTTTACCTCACCC
TCAAGCGCGCATTCGGCGGCTTCGGGCCGAGCGGGTCGGGGGACGAGAAC
GGGATCGCCGGGAGGGTCGGGGTGATATCCCCGTACACCCAGCAGGTCAA
CGTGCTCCGGGATAAGTTTAAGATGTTTTTCGACCTCACCACGGGACAGC
AGAAGCGGCTCGGGGGGGGGTCTTTGAGCAACATCCCAGAGGCATACCTC
ACCTTGAACGTTTACCTCACCCTCAAGCGCGCATTCGGCGGCTTCGGGCC
GAGCGGGTCGGGGGACGAGAACGGGATCGCCGGGAGGGTCGGGGTGATAT
CCCCGTACACCCAGCAGGTCAACGTGCTCCGGGATAAGTTTAAGGAAGGG
CTTGGGCACGCCTGGCAGGATGAAGTTGAAATCAGCACGGTCGACGCCTT
CCAGGGCCGAGAAAAGGACGTTATCATCGTGTCAACTGTGCGCGCCGCGG
GGTCGCGCGGAATTGGCTTCCTCGCAGACGTACGCCGAATGAATGTGGCC
CTAACACGCGCAAGGCACGGGCTCTTCGTCGTCGGCTCCGCCAAGGCCCT
CTCGGTGAACCCGAAGTGGTCGGAGCTCGCAGAGCTCGCCCGAAGTAGCG
GAGGCCTTGTGAGGGTCGCACGCCCTGGGTGCGATCTGCTCGCGCTAAAG
CCTGCCGCGGCGCGGGCAGCGGCCGAGGCAGGGGCTCGTCGGTCCGTGTC
GCCCGTGCCTACGCCAAGACTGCTTCCTTTTTCCGCGAACGGCGTTCGGG
CTGAAGCGCCTGCTGAGAGGGTTAGGGCCGGTGGCGGTGGCGGTGGTGGT
GGTGTTAGTGCTGTCAGTGGTGGTGGTGGTGGTGGTGGTGACCGTGGTCG
ATGCGCTGTTGTTAGCGCTGGCGCTGGTGCGGAAGAGGATGGTGGAAAGG
AAGGAGCCGGGGACACGGGAGAGCGTAGCGTCGTTTCTGTCGCGGTTCCG
TCCGCAGGATCCATCGCCGCGCTCCCGCTCTCGGACAGTACGGCACCCGT
CCCGCTGCAGCCGACCCCGGCAAGCGAAATCACCGCGGAAATTGCGGCCG
GGGTGCCGGGGGTCGCCGCGCAATCAAGCCTGTCGGCGCAGCAAGAGGTG
AGGCCACATTCTCCCCCGCCTCCGTCCCGGGCGGCAGGTCAGCCTCAAAC
TCAAAATCAGCAAGAAGAAGCGAGAGGAGTTGGGGGGGGGAGTGACAAGG
GCGGAGACGGGGCTGTGGTAGGTACGGCTGTGGCCGCTCAGGGTGCGAAA
GAGGAGGTGGGGGTTAGGGTTTCGACGCCTTCGCCACCACCGCCGCAGCA
AGCGAGCGTTCCACCAATAACCTCTGCTATGCCTTCGGCATTACCGCCGA
GACCGCGACCGCCGGTGCCACCGCCAGGCCCACCTCCGAAGCGACCAGAA
CCAGCAGCAGTAATCACAGCTGCGGCGACACCACCGTCCGAAAACGTACC
CCCTACGGCAACTGCGGAGGCGGAGGGTGCGGCGGCGGCGGAAGCAACAG
CAGGAGTGGATGGCGGTCCGCCGCCTCCTCTCAAGAGCACTGGCAAACCT
AAGCCCCGGCCACCATCGTATCCCCGACCCCGAAATCCATCCGACCCGCG
GTGTGCGGGGAACCAGCCGCCCGGCGCTGCTGCCACCCAGAAAAGCAAAC
CTAAACCGCCCCCGCCGCGTAGCACGGAATCACCGCCACCCTCCCCCGCA
GGGGCTGTGAGTCCGACGTCCCCGGTCCCTCCTGCAACGTCCACAACGAC
GGCGACACCTGCCGCCGCGAGGCGCCCCGGCGATCCACGACCCCGACCCC
GACCTCCACCCTACCCTCGCGGCAGCGGCCCTGGCGGAAAGCAGCCTTCC
ACTACGGCTGCAGACAACTCTGCCCCGAAGGGCTTGGGCACGCCTGGCAG
GATGAAGTTGAAATCAGCACGGTCGACGCCTTCCAGGGCCGAGAAAAGGA
CGTTATCATCGTGTCAACTGTGCGCGCCGCGGGGTCGCGCGGAATTGGCT
TCCTCGCAGACGTACGCCGAATGAATGTGGCCCTAACACGCGCAAGGCAC
GGGCTCTTCGTCGTCGGCTCCGCCAAGGCCCTCTCGGTGAACCCGAAGTG
GTCGGAGCTCGCAGAGCTCGCCCGAAGTAGCGGAGGCCTTGTGAGGGTCG
CACGCCCTGGGTGCGATCTGCTCGCGCTAAAGCCTGCCGCGGCGCGGGCA
GCGGCCGAGGCAGGGGCTCGTCGGTCCGTGTCGCCCGTGCCTACGCCAAG
ACTGCTTCCTTTTTCCGCGAACGGCGTTCGGGCTGAAGCGCCTGCTGAGA
GGGTTAGGGCCGGTGGCGGTGGCGGTGGTGGTGGTGTTAGTGCTGTCAGT
GGTGGTGGTGGTGGTGGTGGTGACCGTGGTCGATGCGCTGTTGTTAGCGC
TGGCGCTGGTGCGGAAGAGGATGGTGGAAAGGAAGGAGCCGGGGACACGG
GAGAGCGTAGCGTCGTTTCTGTCGCGGTTCCGTCCGCAGGATCCATCGCC
GCGCTCCCGCTCTCGGACAGTACGGCACCCGTCCCGCTGCAGCCGACCCC
GGCAAGCGAAATCACCGCGGAAATTGCGGCCGGGGTGCCGGGGGTCGCCG
CGCAATCAAGCCTGTCGGCGCAGCAAGAGGTGAGGCCACATTCTCCCCCG
CCTCCGTCCCGGGCGGCAGGTCAGCCTCAAACTCAAAATCAGCAAGAAGA
AGCGAGAGGAGTTGGGGGGGGGAGTGACAAGGGCGGAGACGGGGCTGTGG
TAGGTACGGCTGTGGCCGCTCAGGGTGCGAAAGAGGAGGTGGGGGTTAGG
GTTTCGACGCCTTCGCCACCACCGCCGCAGCAAGCGAGCGTTCCACCAAT
AACCTCTGCTATGCCTTCGGCATTACCGCCGAGACCGCGACCGCCGGTGC
CACCGCCAGGCCCACCTCCGAAGCGACCAGAACCAGCAGCAGTAATCACA
GCTGCGGCGACACCACCGTCCGAAAACGTACCCCCTACGGCAACTGCGGA
GGCGGAGGGTGCGGCGGCGGCGGAAGCAACAGCAGGAGTGGATGGCGGTC
CGCCGCCTCCTCTCAAGAGCACTGGCAAACCTAAGCCCCGGCCACCATCG
TATCCCCGACCCCGAAATCCATCCGACCCGCGGTGTGCGGGGAACCAGCC
GCCCGGCGCTGCTGCCACCCAGAAAAGCAAACCTAAACCGCCCCCGCCGC
GTAGCACGGAATCACCGCCACCCTCCCCCGCAGGGGCTGTGAGTCCGACG
TCCCCGGTCCCTCCTGCAACGTCCACAACGACGGCGACACCTGCCGCCGC
GAGGCGCCCCGGCGATCCACGACCCCGACCCCGACCTCCACCCTACCCTC
GCGGCAGCGGCCCTGGCGGAAAGCAGCCTTCCACTACGGCTGCAGACAAC
TCTGCCCCCACCCGTCGCACTGCCTCACCCGTCGCACTGCCTGGCGTGCG
GCAGGCCCGCCGCCGCCACCGCCGCCACCCCCGCCCCCACCGCATCTCGC
CCCCACCGGCGTCGCCCCTCCCGGTTTCGCCCGCGGGGACGGGCGAGCGG
GGTTGCCGGTAGCAACGCCCCCACGTTCTCCGCCCCCGCGGGATCCCAGG
AAGCGGGACAGGGGCGTGCGGCAGGCCCGCCGCCGCCACCGCCGCCACCC
CCGCCCCCACCGCATCTCGCCCCCACCGGCGTCGCCCCTCCCGGTTTCGC
CCGCGGGGACGGGCGAGCGGGGTTGCCGGTAGCAACGCCCCCACGTTCTC
CGCCCCCGCGGGATCCCAGGAAGCGGGACAGG
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